1-27943759-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943759
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943759
    reference: chr 1
allele count: 1
allele frequency: 8.274720728175424e-6
allele num: 120850
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.477T>A
  hgvsp: ENST00000374004.1:c.477T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.477T>A
  hgvsp: ENST00000457296.1:c.477T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.477T>A
  hgvsp: ENST00000374005.3:c.477T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-242T>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.477T>A
  hgvsp: ENST00000399173.1:c.477T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.477T>A
  hgvsp: ENST00000374003.3:c.477T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36183
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2389
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu159Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

1-27943764-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943764
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943764
    reference: chr 1
allele count: 1
allele frequency: 8.282533792737874e-6
allele num: 120736
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.472C>T
  hgvsp: ENST00000374004.1:c.472C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.472C>T
  hgvsp: ENST00000399173.1:c.472C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.472C>T
  hgvsp: ENST00000457296.1:c.472C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.472C>T
  hgvsp: ENST00000374003.3:c.472C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.472C>T
  hgvsp: ENST00000374005.3:c.472C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-247C>T
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3065
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1007
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 453
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2106
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10636
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu158Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

1-27943765-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943765
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943765
    reference: chr 1
allele count: 2
allele frequency: 1.655437283758505e-5
allele num: 120814
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.471G>C
  hgvsp: ENSP00000407670.1:p.Gln157His
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.471G>C
  hgvsp: ENSP00000363117.3:p.Gln157His
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-248G>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.471G>C
  hgvsp: ENSP00000382126.1:p.Gln157His
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.471G>C
  hgvsp: ENSP00000363115.3:p.Gln157His
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.471G>C
  hgvsp: ENSP00000363116.1:p.Gln157His
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
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genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 440
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10667
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36231
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gln157His
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

1-27943774-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943774
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943774
    reference: chr 1
allele count: 2
allele frequency: 1.656067832538421e-5
allele num: 120768
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.462A>G
  hgvsp: ENST00000374003.3:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.462A>G
  hgvsp: ENST00000374004.1:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.462A>G
  hgvsp: ENST00000457296.1:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.462A>G
  hgvsp: ENST00000399173.1:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-257A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.462A>G
  hgvsp: ENST00000374005.3:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15360
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9799
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26423
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2107
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala154Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

1-27943780-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943780
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943780
    reference: chr 1
allele count: 1
allele frequency: 8.284455048546906e-6
allele num: 120708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.456G>A
  hgvsp: ENST00000374004.1:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.456G>A
  hgvsp: ENST00000374005.3:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.456G>A
  hgvsp: ENST00000457296.1:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.456G>A
  hgvsp: ENST00000399173.1:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-263G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.456G>A
  hgvsp: ENST00000374003.3:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2105
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3426
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys152Lys
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

1-27943790-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943790
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943790
    reference: chr 1
allele count: 1
allele frequency: 8.290911502810618e-6
allele num: 120614
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.446T>C
  hgvsp: ENSP00000363115.3:p.Ile149Thr
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.446T>C
  hgvsp: ENSP00000363117.3:p.Ile149Thr
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-273T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.446T>C
  hgvsp: ENSP00000407670.1:p.Ile149Thr
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.446T>C
  hgvsp: ENSP00000382126.1:p.Ile149Thr
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.446T>C
  hgvsp: ENSP00000363116.1:p.Ile149Thr
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2354
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36187
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile149Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

1-27943798-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943798
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943798
    reference: chr 1
allele count: 1
allele frequency: 8.296138976920141e-6
allele num: 120538
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.438T>C
  hgvsp: ENST00000399173.1:c.438T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.438T>C
  hgvsp: ENST00000374004.1:c.438T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.438T>C
  hgvsp: ENST00000374003.3:c.438T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-281T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.438T>C
  hgvsp: ENST00000374005.3:c.438T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.438T>C
  hgvsp: ENST00000457296.1:c.438T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26340
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10617
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2354
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2103
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe146Phe
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-27943801-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943801
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943801
    reference: chr 1
allele count: 1
allele frequency: 8.300821781356355e-6
allele num: 120470
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.435C>T
  hgvsp: ENST00000374004.1:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.435C>T
  hgvsp: ENST00000374005.3:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-284C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.435C>T
  hgvsp: ENST00000374003.3:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.435C>T
  hgvsp: ENST00000457296.1:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.435C>T
  hgvsp: ENST00000399173.1:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3058
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3414
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr145Tyr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

1-27943805-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943805
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943805
    reference: chr 1
allele count: 1
allele frequency: 8.305096006909839e-6
allele num: 120408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-288G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.431G>A
  hgvsp: ENSP00000382126.1:p.Trp144Ter
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.431G>A
  hgvsp: ENSP00000363117.3:p.Trp144Ter
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.431G>A
  hgvsp: ENSP00000363115.3:p.Trp144Ter
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.431G>A
  hgvsp: ENSP00000363116.1:p.Trp144Ter
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.431G>A
  hgvsp: ENSP00000407670.1:p.Trp144Ter
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10597
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Trp144Ter
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

1-27943837-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943837
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943837
    reference: chr 1
allele count: 5
allele frequency: 4.190974317709381e-5
allele num: 119304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-320T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.429-30T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.429-30T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.429-30T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.429-30T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.429-30T>C
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22622
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4597
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4658
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4076
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11939
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
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genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
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genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 28400
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genotype quality: GenotypeQuality
  all individuals: 2490
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 974
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2011
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3326
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8764
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 5
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
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genotype quality: GenotypeQuality
  all individuals: 1604
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genotype quality: GenotypeQuality
  all individuals: 64
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genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

1-27943838-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943838
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943838
    reference: chr 1
allele count: 6
allele frequency: 5.034570718936699e-5
allele num: 119176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-321G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.429-31G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.429-31G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.429-31G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.429-31G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.429-31G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1957
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genotype quality: GenotypeQuality
  all individuals: 2687
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genotype quality: GenotypeQuality
  all individuals: 1685
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genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD

1-27943839-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943839
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943839
    reference: chr 1
allele count: 1
allele frequency: 8.394191219675984e-6
allele num: 119130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.429-32C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.429-32C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.429-32C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.429-32C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-322C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.429-32C>T
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8622
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 71
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8515
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26855
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

1-27943840-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943840
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943840
    reference: chr 1
allele count: 1
allele frequency: 8.394614015647561e-6
allele num: 119124
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.429-33G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.429-33G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-323G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.429-33G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.429-33G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.429-33G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21500
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 790
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 817
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 891
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26566
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3111
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2318
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8481
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1847
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 2644
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3010
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

1-27943851-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943851
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943851
    reference: chr 1
allele count: 649
allele frequency: 5.479012595819403e-3
allele num: 118452
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.429-44G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.429-44G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.429-44G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.429-44G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-334G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.429-44G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 3.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8844
  bin: 3.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 15126
  bin: 2.75e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 12088
  bin: 2.25e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 11218
  bin: 1.75e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 5047
  bin: 1.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 111
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  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 28
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 4.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 2676
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 257
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
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genotype quality: GenotypeQuality
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5042
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genotype quality: GenotypeQuality
  all individuals: 18079
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1842
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1331
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  variant carriers: 3
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 375
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genotype quality: GenotypeQuality
  all individuals: 938
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genotype quality: GenotypeQuality
  all individuals: 3838
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 21
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

1-27943853-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27943853
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27943853
    reference: chr 1
allele count: 3
allele frequency: 2.537555826228177e-5
allele num: 118224
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.429-46A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.335-336A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.429-46A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.429-46A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.429-46A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.429-46A>G
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
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genotype quality: GenotypeQuality
  all individuals: 2790
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genotype quality: GenotypeQuality
  all individuals: 1866
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 15938
  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 6321
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3113
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

1-27948032-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948032
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948032
    reference: chr 1
allele count: 1
allele frequency: 8.322652595835345e-6
allele num: 120154
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.428+38G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.428+38G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.428+38G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+132G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.428+38G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.428+38G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8167
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25756
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3159
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3626
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7644
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD

1-27948034-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948034
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948034
    reference: chr 1
allele count: 18
allele frequency: 1.497379585724981e-4
allele num: 120210
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.428+36C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.428+36C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.428+36C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+130C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.428+36C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.428+36C>G
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8434
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4388
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19634
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 16064
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 7664
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 20
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1146
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 780
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genotype quality: GenotypeQuality
  all individuals: 3634
  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 751
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genotype quality: GenotypeQuality
  all individuals: 401
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genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-27948037-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948037
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948037
    reference: chr 1
allele count: 2
allele frequency: 1.6619025460347e-5
allele num: 120344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.428+33G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.428+33G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.428+33G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.428+33G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+127G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.428+33G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4396
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8583
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20141
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
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genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16464
  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 481
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 1780
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 27582
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genotype quality: GenotypeQuality
  all individuals: 875
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ

1-27948039-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948039
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948039
    reference: chr 1
allele count: 1
allele frequency: 8.30357884248111e-6
allele num: 120430
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.428+31A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.428+31A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.428+31A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+125A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.428+31A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.428+31A>G
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4389
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2652
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genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

1-27948044-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948044
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948044
    reference: chr 1
allele count: 1
allele frequency: 8.292699107705576e-6
allele num: 120588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.428+26G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.428+26G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.428+26G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+120G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.428+26G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.428+26G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17132
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8712
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3188
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7647
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3657
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29132
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

1-27948052-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948052
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948051
    reference: chr 1
allele count: 1
allele frequency: 8.272393368849475e-6
allele num: 120884
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.428+17delG
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+111delG
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.428+17delG
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.428+17delG
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.428+17delG
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.428+17delG
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8840
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1389
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30372
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3212
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7649
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: GC
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-27948052-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948052
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948052
    reference: chr 1
allele count: 1
allele frequency: 8.272393368849475e-6
allele num: 120884
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.428+18C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.428+18C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+112C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.428+18C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.428+18C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.428+18C>T
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8840
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3212
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8548
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/1-27948053-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948053
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948053
    reference: chr 1
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.428+17G>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.428+17G>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+111G>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.428+17G>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.428+17G>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.428+17G>T
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2665
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8541
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7649
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

1-27948053-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948053
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948053
    reference: chr 1
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+111G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.428+17G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.428+17G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.428+17G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.428+17G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.428+17G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7649
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2665
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8541
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3677
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1389
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

1-27948054-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948054
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948054
    reference: chr 1
allele count: 8
allele frequency: 6.611898110650116e-5
allele num: 120994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+110G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.428+16G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.428+16G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.428+16G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.428+16G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.428+16G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 2678
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3686
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7654
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30627
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

1-27948058-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948058
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948058
    reference: chr 1
allele count: 1
allele frequency: 8.25722920416825e-6
allele num: 121106
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.428+12T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.428+12T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.428+12T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.428+12T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+106T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.428+12T>C
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17970
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2666
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genotype quality: GenotypeQuality
  all individuals: 2
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1787
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genotype quality: GenotypeQuality
  all individuals: 31030
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 50
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genotype quality: GenotypeQuality
  all individuals: 1389
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genotype quality: GenotypeQuality
  all individuals: 7652
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3231
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genotype quality: GenotypeQuality
  all individuals: 28
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genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

1-27948069-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948069
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948069
    reference: chr 1
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.428+1G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.428+1G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.428+1G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.428+1G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+95G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.428+1G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21544
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 58
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
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genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
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genotype depth: GenotypeDepth
  all individuals: 441
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3695
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genotype quality: GenotypeQuality
  all individuals: 88
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7653
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: c.428+1G>A
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD

1-27948071-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948071
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948071
    reference: chr 1
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.427G>A
  hgvsp: ENSP00000382126.1:p.Glu143Lys
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.427G>A
  hgvsp: ENSP00000363116.1:p.Glu143Lys
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.427G>A
  hgvsp: ENSP00000363115.3:p.Glu143Lys
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+93G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.427G>A
  hgvsp: ENSP00000407670.1:p.Glu143Lys
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.427G>A
  hgvsp: ENSP00000363117.3:p.Glu143Lys
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21567
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31467
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu143Lys
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

1-27948082-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948082
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948082
    reference: chr 1
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+82T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.416T>C
  hgvsp: ENSP00000363116.1:p.Ile139Thr
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.416T>C
  hgvsp: ENSP00000382126.1:p.Ile139Thr
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.416T>C
  hgvsp: ENSP00000363117.3:p.Ile139Thr
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.416T>C
  hgvsp: ENSP00000363115.3:p.Ile139Thr
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.416T>C
  hgvsp: ENSP00000407670.1:p.Ile139Thr
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21567
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3702
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31521
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7654
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1788
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2664
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3237
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile139Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

1-27948088-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948088
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948088
    reference: chr 1
allele count: 2
allele frequency: 1.648016612007449e-5
allele num: 121358
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.410A>G
  hgvsp: ENSP00000363117.3:p.Asp137Gly
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.410A>G
  hgvsp: ENSP00000382126.1:p.Asp137Gly
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.410A>G
  hgvsp: ENSP00000363115.3:p.Asp137Gly
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.410A>G
  hgvsp: ENSP00000407670.1:p.Asp137Gly
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.410A>G
  hgvsp: ENSP00000363116.1:p.Asp137Gly
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+76A>G
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8927
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3703
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2660
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8680
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31534
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp137Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

1-27948101-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948101
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948101
    reference: chr 1
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.397G>A
  hgvsp: ENSP00000363117.3:p.Val133Met
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.397G>A
  hgvsp: ENSP00000407670.1:p.Val133Met
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+63G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.397G>A
  hgvsp: ENSP00000382126.1:p.Val133Met
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.397G>A
  hgvsp: ENSP00000363115.3:p.Val133Met
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.397G>A
  hgvsp: ENSP00000363116.1:p.Val133Met
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31553
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3698
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7653
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val133Met
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS

1-27948102-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948102
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948102
    reference: chr 1
allele count: 3
allele frequency: 2.47133254250692e-5
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.396C>T
  hgvsp: ENST00000374003.3:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.396C>T
  hgvsp: ENST00000457296.1:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.396C>T
  hgvsp: ENST00000374004.1:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+62C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.396C>T
  hgvsp: ENST00000374005.3:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.396C>T
  hgvsp: ENST00000399173.1:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21556
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3238
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31554
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Tyr132Tyr
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

1-27948108-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948108
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948108
    reference: chr 1
allele count: 106
allele frequency: 8.732329390055031e-4
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.390C>G
  hgvsp: ENSP00000363115.3:p.Ser130Arg
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+56C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.390C>G
  hgvsp: ENSP00000363117.3:p.Ser130Arg
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.390C>G
  hgvsp: ENSP00000407670.1:p.Ser130Arg
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.390C>G
  hgvsp: ENSP00000363116.1:p.Ser130Arg
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.390C>G
  hgvsp: ENSP00000382126.1:p.Ser130Arg
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 18221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3233
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8672
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser130Arg
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP

1-27948116-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948116
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948116
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.382A>G
  hgvsp: ENSP00000382126.1:p.Ile128Val
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.382A>G
  hgvsp: ENSP00000363116.1:p.Ile128Val
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.382A>G
  hgvsp: ENSP00000407670.1:p.Ile128Val
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.382A>G
  hgvsp: ENSP00000363117.3:p.Ile128Val
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.382A>G
  hgvsp: ENSP00000363115.3:p.Ile128Val
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+48A>G
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2653
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1789
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7646
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile128Val
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

1-27948131-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948131
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948131
    reference: chr 1
allele count: 3
allele frequency: 2.471658317954126e-5
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.367G>A
  hgvsp: ENSP00000363115.3:p.Gly123Arg
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.367G>A
  hgvsp: ENSP00000382126.1:p.Gly123Arg
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+33G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.367G>A
  hgvsp: ENSP00000363116.1:p.Gly123Arg
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.367G>A
  hgvsp: ENSP00000363117.3:p.Gly123Arg
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.367G>A
  hgvsp: ENSP00000407670.1:p.Gly123Arg
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8940
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8692
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3694
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31543
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly123Arg
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

1-27948132-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948132
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948132
    reference: chr 1
allele count: 444
allele frequency: 3.658114587967769e-3
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.366C>T
  hgvsp: ENST00000374003.3:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.366C>T
  hgvsp: ENST00000374004.1:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+32C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.366C>T
  hgvsp: ENST00000457296.1:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.366C>T
  hgvsp: ENST00000399173.1:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.366C>T
  hgvsp: ENST00000374005.3:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.75e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 4.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 4387
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 18210
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 4.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 8856
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 6.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2606
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8647
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser122Ser
num of homozygotes: 5
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-27948146-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948146
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948146
    reference: chr 1
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.334+18C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.352C>T
  hgvsp: ENSP00000407670.1:p.Arg118Trp
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.352C>T
  hgvsp: ENSP00000363117.3:p.Arg118Trp
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.352C>T
  hgvsp: ENSP00000363116.1:p.Arg118Trp
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.352C>T
  hgvsp: ENSP00000363115.3:p.Arg118Trp
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.352C>T
  hgvsp: ENSP00000382126.1:p.Arg118Trp
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21279
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31533
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8734
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3238
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg118Trp
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-27948170-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948170
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948170
    reference: chr 1
allele count: 1
allele frequency: 8.248783304462591e-6
allele num: 121230
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.330-2A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.330-2A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.330-2A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.330-2A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.330-2A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.330-2A>G
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31120
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2631
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8703
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3664
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
hgvs: c.330-2A>G
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum

1-27948175-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948175
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948175
    reference: chr 1
allele count: 8
allele frequency: 6.601640507666154e-5
allele num: 121182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.330-7C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.330-7C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.330-7C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.330-7C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.330-7C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.330-7C>T
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8983
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20581
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2623
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3651
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3222
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: c.330-7C>T
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

1-27948178-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948178
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948178
    reference: chr 1
allele count: 3
allele frequency: 2.477005135657315e-5
allele num: 121114
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.330-10G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.330-10G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.330-10G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.330-10G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.330-10G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.330-10G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2624
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3640
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1384
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3214
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

1-27948186-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948186
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948186
    reference: chr 1
allele count: 8
allele frequency: 6.614194060453734e-5
allele num: 120952
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.330-18C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.330-18C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.330-18C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.330-18C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.330-18C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.330-18C>G
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18085
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2616
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8510
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

1-27948205-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948205
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948205
    reference: chr 1
allele count: 63
allele frequency: 5.230386052303861e-4
allele num: 120450
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.330-37G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.330-37G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.330-37G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.330-37G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.330-37G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.330-37G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 26
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4370
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 351
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15857
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  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 13958
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2066
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2916
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2677
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 665
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

1-27948218-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27948218
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27948218
    reference: chr 1
allele count: 5
allele frequency: 4.185221147085412e-5
allele num: 119468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.330-50G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.330-50G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.330-50G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.330-50G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.330-50G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.330-50G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7237
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9293
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15728
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4621
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4413
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 152
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genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

1-27949507-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949507
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949507
    reference: chr 1
allele count: 1
allele frequency: 8.47314014573801e-6
allele num: 118020
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.329+46C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.329+46C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.329+46C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.329+46C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.329+46C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.329+46C>T
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13102
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24674
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5126
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3083
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

1-27949508-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949508
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949508
    reference: chr 1
allele count: 1
allele frequency: 8.463817181548878e-6
allele num: 118150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.329+45G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.329+45G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.329+45G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.329+45G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.329+45G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.329+45G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10475
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6750
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13267
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3025
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1559
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3861
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4219
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5106
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/1-27949512-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949512
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949513
    reference: chr 1
allele count: 2
allele frequency: 1.688818333811832e-5
allele num: 118426
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.329+40dupT
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.329+40dupT
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.329+40dupT
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.329+40dupT
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.329+40dupT
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.329+40dupT
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1497
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2043
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4212
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1451
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP

1-27949525-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949525
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949525
    reference: chr 1
allele count: 1
allele frequency: 8.389684044498884e-6
allele num: 119194
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.329+28C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.329+28C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.329+28C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.329+28C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.329+28C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.329+28C>T
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1519
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5631
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39204
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

1-27949529-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949529
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949529
    reference: chr 1
allele count: 2
allele frequency: 1.674144512154289e-5
allele num: 119464
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.329+24A>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.329+24A>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.329+24A>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.329+24A>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.329+24A>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.329+24A>C
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4696
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41227
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4211
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5691
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

1-27949533-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949533
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949533
    reference: chr 1
allele count: 1
allele frequency: 8.346966712296751e-6
allele num: 119804
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.329+20A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.329+20A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.329+20A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.329+20A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.329+20A>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.329+20A>G
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29827
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4211
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 42919
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1016
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5802
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum

1-27949540-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949540
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949540
    reference: chr 1
allele count: 2
allele frequency: 1.662178783950002e-5
allele num: 120324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.329+13G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.329+13G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.329+13G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.329+13G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.329+13G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.329+13G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44208
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum

1-27949552-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949552
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949552
    reference: chr 1
allele count: 1
allele frequency: 8.274583788435442e-6
allele num: 120852
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.329+1G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.329+1G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.329+1G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.329+1G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.329+1G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.329+1G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45343
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
hgvs: c.329+1G>A
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

1-27949553-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949553
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949553
    reference: chr 1
allele count: 39
allele frequency: 3.226286792078225e-4
allele num: 120882
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.329C>T
  hgvsp: ENSP00000407670.1:p.Thr110Ile
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.329C>T
  hgvsp: ENSP00000445302.1:p.Thr110Ile
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.329C>T
  hgvsp: ENSP00000363116.1:p.Thr110Ile
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.329C>T
  hgvsp: ENSP00000382126.1:p.Thr110Ile
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.329C>T
  hgvsp: ENSP00000363115.3:p.Thr110Ile
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.329C>T
  hgvsp: ENSP00000363117.3:p.Thr110Ile
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 18254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4917
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 31005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6001
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr110Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS

1-27949553-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949553
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949553
    reference: chr 1
allele count: 5
allele frequency: 4.136265118049007e-5
allele num: 120882
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.329C>A
  hgvsp: ENSP00000407670.1:p.Thr110Asn
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.329C>A
  hgvsp: ENSP00000363115.3:p.Thr110Asn
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.329C>A
  hgvsp: ENSP00000363116.1:p.Thr110Asn
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.329C>A
  hgvsp: ENSP00000363117.3:p.Thr110Asn
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.329C>A
  hgvsp: ENSP00000382126.1:p.Thr110Asn
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.329C>A
  hgvsp: ENSP00000445302.1:p.Thr110Asn
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31005
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4246
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1416
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr110Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-27949569-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949569
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949569
    reference: chr 1
allele count: 12
allele frequency: 9.903768383870063e-5
allele num: 121166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.313C>T
  hgvsp: ENSP00000445302.1:p.His105Tyr
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.313C>T
  hgvsp: ENSP00000363115.3:p.His105Tyr
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.313C>T
  hgvsp: ENSP00000407670.1:p.His105Tyr
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.313C>T
  hgvsp: ENSP00000363116.1:p.His105Tyr
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.313C>T
  hgvsp: ENSP00000363117.3:p.His105Tyr
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.313C>T
  hgvsp: ENSP00000382126.1:p.His105Tyr
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4930
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18505
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6045
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45806
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1429
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His105Tyr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

1-27949576-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949576
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949576
    reference: chr 1
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.306G>C
  hgvsp: ENSP00000363116.1:p.Glu102Asp
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.306G>C
  hgvsp: ENSP00000382126.1:p.Glu102Asp
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.306G>C
  hgvsp: ENSP00000363115.3:p.Glu102Asp
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.306G>C
  hgvsp: ENSP00000407670.1:p.Glu102Asp
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.306G>C
  hgvsp: ENSP00000363117.3:p.Glu102Asp
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.306G>C
  hgvsp: ENSP00000445302.1:p.Glu102Asp
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4924
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4205
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu102Asp
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-27949579-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949579
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949579
    reference: chr 1
allele count: 1
allele frequency: 8.24905548314718e-6
allele num: 121226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.303C>A
  hgvsp: ENST00000457296.1:c.303C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.303C>A
  hgvsp: ENST00000374005.3:c.303C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.303C>A
  hgvsp: ENST00000374004.1:c.303C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.303C>A
  hgvsp: ENST00000545953.1:c.303C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.303C>A
  hgvsp: ENST00000399173.1:c.303C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.303C>A
  hgvsp: ENST00000374003.3:c.303C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18595
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6077
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly101Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-27949580-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949580
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949580
    reference: chr 1
allele count: 2
allele frequency: 1.649838315845047e-5
allele num: 121224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.302G>A
  hgvsp: ENSP00000382126.1:p.Gly101Asp
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.302G>A
  hgvsp: ENSP00000363115.3:p.Gly101Asp
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.302G>A
  hgvsp: ENSP00000407670.1:p.Gly101Asp
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.302G>A
  hgvsp: ENSP00000363117.3:p.Gly101Asp
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.302G>A
  hgvsp: ENSP00000445302.1:p.Gly101Asp
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.302G>A
  hgvsp: ENSP00000363116.1:p.Gly101Asp
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18613
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4208
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly101Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-27949585-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949585
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949585
    reference: chr 1
allele count: 2
allele frequency: 1.649702228747711e-5
allele num: 121234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.297C>A
  hgvsp: ENST00000457296.1:c.297C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.297C>A
  hgvsp: ENST00000374003.3:c.297C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.297C>A
  hgvsp: ENST00000399173.1:c.297C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.297C>A
  hgvsp: ENST00000374005.3:c.297C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.297C>A
  hgvsp: ENST00000374004.1:c.297C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.297C>A
  hgvsp: ENST00000545953.1:c.297C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6087
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1416
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1431
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr99Thr
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

1-27949603-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949603
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949603
    reference: chr 1
allele count: 1
allele frequency: 8.25300409349003e-6
allele num: 121168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.279G>A
  hgvsp: ENST00000374004.1:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.279G>A
  hgvsp: ENST00000457296.1:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.279G>A
  hgvsp: ENST00000374005.3:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.279G>A
  hgvsp: ENST00000374003.3:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.279G>A
  hgvsp: ENST00000399173.1:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.279G>A
  hgvsp: ENST00000545953.1:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30883
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45700
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6077
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu93Glu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-27949610-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949610
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949610
    reference: chr 1
allele count: 1
allele frequency: 8.257365570088519e-6
allele num: 121104
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.272G>A
  hgvsp: ENSP00000445302.1:p.Arg91Gln
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.272G>A
  hgvsp: ENSP00000363115.3:p.Arg91Gln
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.272G>A
  hgvsp: ENSP00000363116.1:p.Arg91Gln
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.272G>A
  hgvsp: ENSP00000363117.3:p.Arg91Gln
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.272G>A
  hgvsp: ENSP00000407670.1:p.Arg91Gln
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.272G>A
  hgvsp: ENSP00000382126.1:p.Arg91Gln
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4205
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg91Gln
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

1-27949639-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949639
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949639
    reference: chr 1
allele count: 91
allele frequency: 7.567819303760624e-4
allele num: 120246
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.243G>C
  hgvsp: ENST00000545953.1:c.243G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.243G>C
  hgvsp: ENST00000374005.3:c.243G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.243G>C
  hgvsp: ENST00000399173.1:c.243G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.243G>C
  hgvsp: ENST00000374004.1:c.243G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.243G>C
  hgvsp: ENST00000374003.3:c.243G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.243G>C
  hgvsp: ENST00000457296.1:c.243G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4925
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29544
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 18636
  bin: 2.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1387
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5924
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44232
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu81Leu
num of homozygotes: 1
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

1-27949641-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949641
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949641
    reference: chr 1
allele count: 1
allele frequency: 8.321544478655239e-6
allele num: 120170
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.241C>A
  hgvsp: ENSP00000382126.1:p.Leu81Met
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.241C>A
  hgvsp: ENSP00000445302.1:p.Leu81Met
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.241C>A
  hgvsp: ENSP00000363116.1:p.Leu81Met
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.241C>A
  hgvsp: ENSP00000363117.3:p.Leu81Met
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.241C>A
  hgvsp: ENSP00000407670.1:p.Leu81Met
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.241C>A
  hgvsp: ENSP00000363115.3:p.Leu81Met
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4189
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1174
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu81Met
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

1-27949645-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949645
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949645
    reference: chr 1
allele count: 1
allele frequency: 8.349754517217195e-6
allele num: 119764
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.237G>C
  hgvsp: ENST00000374005.3:c.237G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.237G>C
  hgvsp: ENST00000374004.1:c.237G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.237G>C
  hgvsp: ENST00000374003.3:c.237G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.237G>C
  hgvsp: ENST00000457296.1:c.237G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.237G>C
  hgvsp: ENST00000399173.1:c.237G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.237G>C
  hgvsp: ENST00000545953.1:c.237G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4917
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5878
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43293
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val79Val
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/1-27949647-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949647
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949647
    reference: chr 1
allele count: 7
allele frequency: 5.849516997025103e-5
allele num: 119668
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.235G>T
  hgvsp: ENSP00000363117.3:p.Val79Leu
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.235G>T
  hgvsp: ENSP00000363115.3:p.Val79Leu
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.235G>T
  hgvsp: ENSP00000407670.1:p.Val79Leu
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.235G>T
  hgvsp: ENSP00000382126.1:p.Val79Leu
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.235G>T
  hgvsp: ENSP00000445302.1:p.Val79Leu
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.235G>T
  hgvsp: ENSP00000363116.1:p.Val79Leu
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4906
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 28506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18655
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4194
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val79Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP

1-27949655-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949655
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949655
    reference: chr 1
allele count: 1
allele frequency: 8.438248894589395e-6
allele num: 118508
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.227G>A
  hgvsp: ENSP00000363116.1:p.Gly76Glu
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.227G>A
  hgvsp: ENSP00000407670.1:p.Gly76Glu
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.227G>A
  hgvsp: ENSP00000382126.1:p.Gly76Glu
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.227G>A
  hgvsp: ENSP00000363115.3:p.Gly76Glu
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.227G>A
  hgvsp: ENSP00000363117.3:p.Gly76Glu
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.227G>A
  hgvsp: ENSP00000445302.1:p.Gly76Glu
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4186
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40558
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly76Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

1-27949662-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949662
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949662
    reference: chr 1
allele count: 1
allele frequency: 8.530239699735563e-6
allele num: 117230
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.227-7T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.227-7T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.227-7T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.227-7T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.227-7T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.227-7T>C
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1155
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5506
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
hgvs: c.227-7T>C
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-27949667-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949667
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949667
    reference: chr 1
allele count: 1
allele frequency: 8.597417335832316e-6
allele num: 116314
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.227-12C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.227-12C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.227-12C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.227-12C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.227-12C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.227-12C>T
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 287
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 1895
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

1-27949669-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949669
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949669
    reference: chr 1
allele count: 1
allele frequency: 8.616232982939859e-6
allele num: 116060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.227-14C>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.227-14C>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.227-14C>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
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  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.227-14C>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.227-14C>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.227-14C>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2561
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2012
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
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site quality: DP

1-27949684-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949684
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949684
    reference: chr 1
allele count: 2
allele frequency: 1.761090467217301e-5
allele num: 113566
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.227-29T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.227-29T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.227-29T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.227-29T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.227-29T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.227-29T>C
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

1-27949688-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949688
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949688
    reference: chr 1
allele count: 1
allele frequency: 8.892999430848037e-6
allele num: 112448
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.227-33G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.227-33G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.227-33G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.227-33G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.227-33G>A
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.227-33G>A
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

1-27949691-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949691
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949691
    reference: chr 1
allele count: 1
allele frequency: 8.937828465196096e-6
allele num: 111884
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.227-36C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.227-36C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.227-36C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.227-36C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.227-36C>G
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.227-36C>G
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13090
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17471
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14279
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13565
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5096
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5049
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1567
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

1-27949694-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949694
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949694
    reference: chr 1
allele count: 2
allele frequency: 1.808547194039029e-5
allele num: 110586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.227-39C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.227-39C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.227-39C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.227-39C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.227-39C>T
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.227-39C>T
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17462
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15033
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4181
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1922
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8081
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1709
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11935
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2432
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13524
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum

1-27949699-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27949699
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27949699
    reference: chr 1
allele count: 1
allele frequency: 9.17397526696268e-6
allele num: 109004
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363116
  ensembl transcript: ENST00000374004
  gene symbol: FGR
  hgvsc: ENST00000374004.1:c.227-44T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363117
  ensembl transcript: ENST00000374005
  gene symbol: FGR
  hgvsc: ENST00000374005.3:c.227-44T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000382126
  ensembl transcript: ENST00000399173
  gene symbol: FGR
  hgvsc: ENST00000399173.1:c.227-44T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000363115
  ensembl transcript: ENST00000374003
  gene symbol: FGR
  hgvsc: ENST00000374003.3:c.227-44T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000445302
  ensembl transcript: ENST00000545953
  gene symbol: FGR
  hgvsc: ENST00000545953.1:c.227-44T>C
  variant of: http://identifiers.org/hgnc/3697
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000000938
  ensembl protein: ENSP00000407670
  ensembl transcript: ENST00000457296
  gene symbol: FGR
  hgvsc: ENST00000457296.1:c.227-44T>C
  variant of: http://identifiers.org/hgnc/3697
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15960
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16965
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5364
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1013
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10659
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3077
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3437
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-2

MQ
type: SiteQuality
SIO_000300: 5.904e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 7.65e-1

DP
type: SiteQuality
SIO_000300: 1.777113e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.202e0

VQSLOD
type: SiteQuality
SIO_000300: -2.485e-1

QD
type: SiteQuality
SIO_000300: 9.380000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.46e-1

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36091
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3424
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2360
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506477854775535e-5
allele num: 66380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.227e0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

FS
type: SiteQuality
SIO_000300: 1.0433e1

DP
type: SiteQuality
SIO_000300: 1.778666e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: -3.197e0

QD
type: SiteQuality
SIO_000300: 2.512e1

MQ
type: SiteQuality
SIO_000300: 5.939e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.629e0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2109
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3428
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2360
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3068
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505751972535084e-5
allele num: 66412
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.56e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.017e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.745e0

FS
type: SiteQuality
SIO_000300: 1.116e0

QD
type: SiteQuality
SIO_000300: 1.36e1

MQ
type: SiteQuality
SIO_000300: 5.977e1

DP
type: SiteQuality
SIO_000300: 1.776572e6

GenotypeQuality
all individuals: 10666
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36269
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3065
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3427
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2358
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.325581395348837e-4
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.978e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

FS
type: SiteQuality
SIO_000300: 1.087e0

VQSLOD
type: SiteQuality
SIO_000300: 4.81e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 1.775927e6

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2357
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3063
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36266
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10659
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.514233797698365e-4
allele num: 6604
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.039e0

DP
type: SiteQuality
SIO_000300: 1.77511e6

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

FS
type: SiteQuality
SIO_000300: 1.2291e1

QD
type: SiteQuality
SIO_000300: 2.138e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.237e0

GenotypeQuality
all individuals: 2104
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3416
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3058
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508978421608571e-5
allele num: 66270
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.47e-1

DP
type: SiteQuality
SIO_000300: 1.773769e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3058
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36119
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3416
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510072181450273e-5
allele num: 66222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.348e1

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.4e-2

FS
type: SiteQuality
SIO_000300: 3.286e0

DP
type: SiteQuality
SIO_000300: 1.772114e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-1

GenotypeQuality
all individuals: 184
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35930
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10606
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variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2103
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2353
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165229550221394e-4
allele num: 8582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66182
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.770836e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.687e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.04e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 86
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35864
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1003
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2351
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3411
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2101
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165772907437631e-4
allele num: 8578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66144
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.01e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.67e0

MQRankSum
type: SiteQuality
SIO_000300: -3.91e-1

DP
type: SiteQuality
SIO_000300: 1.769875e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 2.794e0

VQSLOD
type: SiteQuality
SIO_000300: -2.682e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.75e-1

QD
type: SiteQuality
SIO_000300: 2.98e0

GenotypeQuality
all individuals: 1740
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2330
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 3181
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2734
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 546
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variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.070121576814442e-4
allele num: 16286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65466
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.239e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.634835e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.01e0

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e-1

QD
type: SiteQuality
SIO_000300: 1.248e1

GenotypeQuality
all individuals: 795
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27588
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8652
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.058103975535168e-5
allele num: 65400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.748251748251748e-4
allele num: 11440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.229105211406096e-4
allele num: 16272
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.64e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.625259e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

FS
type: SiteQuality
SIO_000300: 2.081e0

QD
type: SiteQuality
SIO_000300: 1.332e1

GenotypeQuality
all individuals: 965
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2319
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1773
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1971
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2655
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2871
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.150061500615006e-5
allele num: 16260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10146
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

QD
type: SiteQuality
SIO_000300: 7.2e0

MQRankSum
type: SiteQuality
SIO_000300: -1.643e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.016e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.428e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.209e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
type: SiteQuality
SIO_000300: 1.613716e6

GenotypeQuality
all individuals: 93
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3552
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2307
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.846396218983852e-5
allele num: 10156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.606111e6

MQRankSum
type: SiteQuality
SIO_000300: 6.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.017e0

QD
type: SiteQuality
SIO_000300: 5.54e0

VQSLOD
type: SiteQuality
SIO_000300: -2.261e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2808
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2471
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2845
bin: 9.75e1
variant carriers: 605

GenotypeQuality
all individuals: 4641
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3513
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6525
bin: 6.75e1
variant carriers: 6

GenotypeQuality
all individuals: 751
bin: 8.75e1
variant carriers: 2

Other
type: Population
allele count: 2
allele frequency: 2.257336343115124e-3
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 40
allele frequency: 3.51493848857645e-3
allele num: 11380
num of homozygotes: 1

South Asian
type: Population
allele count: 1
allele frequency: 6.175126590095097e-5
allele num: 16194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 55
allele frequency: 8.462580009847366e-4
allele num: 64992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

African
type: Population
allele count: 551
allele frequency: 5.466269841269841e-2
allele num: 10080
num of homozygotes: 20

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.76e-2

QD
type: SiteQuality
SIO_000300: 1.381e1

VQSLOD
type: SiteQuality
SIO_000300: 6.16e0

MQRankSum
type: SiteQuality
SIO_000300: 1.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-2

DP
type: SiteQuality
SIO_000300: 1.519293e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.177e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.03e-1

GenotypeQuality
all individuals: 5417
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4818
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1977
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 760
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4420
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2303
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10054
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.625489530975362e-5
allele num: 64858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 1.3e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

DP
type: SiteQuality
SIO_000300: 1.506325e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

GenotypeQuality
all individuals: 308
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1020
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510665296996797e-5
allele num: 66196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.96e-1

FS
type: SiteQuality
SIO_000300: 3.174e0

VQSLOD
type: SiteQuality
SIO_000300: 4.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

DP
type: SiteQuality
SIO_000300: 1.770844e6

QD
type: SiteQuality
SIO_000300: 1.609e1

GenotypeQuality
all individuals: 592
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26688
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.718294119423722e-4
allele num: 66218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.387e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.552e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.77903e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.79e0

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e-1

GenotypeQuality
all individuals: 450
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7647
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8291
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.017592564651921e-5
allele num: 66278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.37e-1

QD
type: SiteQuality
SIO_000300: 1.032e1

VQSLOD
type: SiteQuality
SIO_000300: 3.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.790941e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 330
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7650
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.693679720822024e-5
allele num: 10316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 5.478e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.36e-1

DP
type: SiteQuality
SIO_000300: 1.79628e6

QD
type: SiteQuality
SIO_000300: 1.794e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.99e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.4e-2

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2649
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variant carriers: 0

GenotypeQuality
all individuals: 262
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variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.678668215253581e-5
allele num: 10332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66406
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.826e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.182e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

DP
type: SiteQuality
SIO_000300: 1.80894e6

QD
type: SiteQuality
SIO_000300: 1.325e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

FS
type: SiteQuality
SIO_000300: 3.054e0

VQSLOD
type: SiteQuality
SIO_000300: 4.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

GenotypeQuality
all individuals: 8548
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3678
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2666
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.087909411907951e-5
allele num: 16426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

FS
type: SiteQuality
SIO_000300: 1.151e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.98e-1

DP
type: SiteQuality
SIO_000300: 1.822262e6

MQ
type: SiteQuality
SIO_000300: 6.032e1

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e-2

QD
type: SiteQuality
SIO_000300: 1.319e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

GenotypeQuality
all individuals: 3678
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
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variant carriers: 0

GenotypeQuality
all individuals: 325
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variant carriers: 0

GenotypeQuality
all individuals: 7649
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.689607229753215e-5
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.822262e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

MQ
type: SiteQuality
SIO_000300: 6.032e1

QD
type: SiteQuality
SIO_000300: 1.319e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

FS
type: SiteQuality
SIO_000300: 1.151e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30409
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.686587908269631e-5
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.08e-1

DP
type: SiteQuality
SIO_000300: 1.82425e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.653e0

MQRankSum
type: SiteQuality
SIO_000300: 6.06e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

QD
type: SiteQuality
SIO_000300: 1.211e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3209
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30409
bin: 6.25e1
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GenotypeQuality
all individuals: 141
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502674761074713e-5
allele num: 66548
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.82425e6

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.653e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

QD
type: SiteQuality
SIO_000300: 1.211e1

MQ
type: SiteQuality
SIO_000300: 5.911e1

GenotypeQuality
all individuals: 8588
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 125
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GenotypeQuality
all individuals: 3217
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.756756756756757e-4
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.948e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.4e-2

QD
type: SiteQuality
SIO_000300: 1.52e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 1.82552e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 192
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8633
bin: 6.75e1
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GenotypeQuality
all individuals: 58
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.151e0

DP
type: SiteQuality
SIO_000300: 1.828998e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

QD
type: SiteQuality
SIO_000300: 1.139e1

VQSLOD
type: SiteQuality
SIO_000300: 4.53e-1

GenotypeQuality
all individuals: 8660
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1388
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1786
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31424
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2661
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3231
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.148e0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.25e-1

DP
type: SiteQuality
SIO_000300: 1.833435e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.623e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

QD
type: SiteQuality
SIO_000300: 1.015e1

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7655
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 8658
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.557e0

DP
type: SiteQuality
SIO_000300: 1.833944e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.664e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQ
type: SiteQuality
SIO_000300: 5.875e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.002e0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8672
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1388
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.615e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e0

DP
type: SiteQuality
SIO_000300: 1.834908e6

QD
type: SiteQuality
SIO_000300: 1.353e1

MQRankSum
type: SiteQuality
SIO_000300: -1.043e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.77e-1

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3233
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7655
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

VQSLOD
type: SiteQuality
SIO_000300: 4.75e-1

FS
type: SiteQuality
SIO_000300: 4.491e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.35e-1

DP
type: SiteQuality
SIO_000300: 1.83524e6

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

QD
type: SiteQuality
SIO_000300: 1.047e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8688
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1388
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2661
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.18e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.079e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-1

DP
type: SiteQuality
SIO_000300: 1.835537e6

MQRankSum
type: SiteQuality
SIO_000300: -1.79e-1

FS
type: SiteQuality
SIO_000300: 4.72e-1

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7654
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3697
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1388
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2661
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8688
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1786
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: 3.05e-1

FS
type: SiteQuality
SIO_000300: 2.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.835761e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.68e-1

QD
type: SiteQuality
SIO_000300: 1.278e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.85e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

GenotypeQuality
all individuals: 3689
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7737
bin: 9.75e1
variant carriers: 105

GenotypeQuality
all individuals: 2648
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31508
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 101
allele frequency: 1.167090362837994e-2
allele num: 8654
num of homozygotes: 1

South Asian
type: Population
allele count: 4
allele frequency: 2.422774076317383e-4
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.021e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.42e-2

MQ
type: SiteQuality
SIO_000300: 5.948e1

VQSLOD
type: SiteQuality
SIO_000300: 4.17e0

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

QD
type: SiteQuality
SIO_000300: 1.234e1

DP
type: SiteQuality
SIO_000300: 1.842584e6

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8692
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3239
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31569
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3695
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.25e-1

QD
type: SiteQuality
SIO_000300: 1.281e1

VQSLOD
type: SiteQuality
SIO_000300: 4.2e0

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 1.835798e6

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7648
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2651
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1386
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3237
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495729057395475e-5
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 5.508e0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

DP
type: SiteQuality
SIO_000300: 1.835883e6

QD
type: SiteQuality
SIO_000300: 1.173e1

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7990
bin: 9.75e1
variant carriers: 438

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 1765
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3656
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31385
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 25
allele frequency: 2.161134163208852e-3
allele num: 11568
num of homozygotes: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 21
allele frequency: 3.177966101694915e-3
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 40
allele frequency: 2.42306760358614e-3
allele num: 16508
num of homozygotes: 1

African
type: Population
allele count: 12
allele frequency: 1.15362430301865e-3
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 8
allele frequency: 8.830022075055188e-3
allele num: 906
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 337
allele frequency: 5.05035367461935e-3
allele num: 66728
num of homozygotes: 2

MQRankSum
type: SiteQuality
SIO_000300: 2.49e-1

DP
type: SiteQuality
SIO_000300: 1.861331e6

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
SIO_000300: 4.76e0

FS
type: SiteQuality
SIO_000300: 5.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-2

QD
type: SiteQuality
SIO_000300: 1.265e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.04e-2

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1388
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2636
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3679
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7584
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0765e1

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 1.835577e6

VQSLOD
type: SiteQuality
SIO_000300: -2.44e0

QD
type: SiteQuality
SIO_000300: 6.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.347e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

GenotypeQuality
all individuals: 3235
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1387
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7584
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.787e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.34e-2

FS
type: SiteQuality
SIO_000300: 1.4193e1

MQ
type: SiteQuality
SIO_000300: 5.94e1

DP
type: SiteQuality
SIO_000300: 1.83252e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e0

VQSLOD
type: SiteQuality
SIO_000300: -1.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.0e-3

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7591
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30747
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.20026405809278e-4
allele num: 66652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.829994e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 1.514e0

QD
type: SiteQuality
SIO_000300: 1.194e1

MQRankSum
type: SiteQuality
SIO_000300: 6.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.266e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.370000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

GenotypeQuality
all individuals: 143
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8620
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30318
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7583
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001831116981359e-5
allele num: 66626
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 1.441e0

DP
type: SiteQuality
SIO_000300: 1.826726e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: 5.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.681e0

QD
type: SiteQuality
SIO_000300: 1.002e1

GenotypeQuality
all individuals: 441
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7585
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 3192
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3615
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29007
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.202031433121976e-4
allele num: 66554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.279e0

QD
type: SiteQuality
SIO_000300: 1.231e1

VQSLOD
type: SiteQuality
SIO_000300: 2.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 1.701e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.814535e6

GenotypeQuality
all individuals: 1218
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2550
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7223
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2477
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7600
bin: 9.75e1
variant carriers: 62

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.378283712784588e-4
allele num: 11420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

African
type: Population
allele count: 58
allele frequency: 5.617977528089887e-3
allele num: 10324
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.1e0

QD
type: SiteQuality
SIO_000300: 1.463e1

MQRankSum
type: SiteQuality
SIO_000300: -1.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.84e-1

DP
type: SiteQuality
SIO_000300: 1.746646e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.673e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2033
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7555
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1751
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11203
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1874
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65762
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.887585532746823e-4
allele num: 10230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 1.697821e6

FS
type: SiteQuality
SIO_000300: 1.5232e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

VQSLOD
type: SiteQuality
SIO_000300: -1.127e0

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

QD
type: SiteQuality
SIO_000300: 1.286e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.674e0

GenotypeQuality
all individuals: 4217
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3878
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1452
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4740
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11112
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533648242439114e-5
allele num: 65204
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.55e-1

FS
type: SiteQuality
SIO_000300: 2.052e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.437e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

DP
type: SiteQuality
SIO_000300: 1.53769e6

VQSLOD
type: SiteQuality
SIO_000300: 5.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

QD
type: SiteQuality
SIO_000300: 1.201e1

GenotypeQuality
all individuals: 2599
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25642
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1414
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2683
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4454
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11114
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10152
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531205977828137e-5
allele num: 65308
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.936e0

DP
type: SiteQuality
SIO_000300: 1.542495e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.432e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 7.29e-1

QD
type: SiteQuality
SIO_000300: 1.78e1

GenotypeQuality
all individuals: 304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3558
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29408
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2863
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1324
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5195
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.056795255853763e-5
allele num: 65428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15926
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11180
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.316e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.26e-1

MQ
type: SiteQuality
SIO_000300: 6.029e1

MQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.24e0

QD
type: SiteQuality
SIO_000300: 1.65e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

DP
type: SiteQuality
SIO_000300: 1.565406e6

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 1324
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1341
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4211
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11280
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.782821365681862e-5
allele num: 10222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16016
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

FS
type: SiteQuality
SIO_000300: 2.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.48e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.339e-1

QD
type: SiteQuality
SIO_000300: 2.556e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.58e-1

DP
type: SiteQuality
SIO_000300: 1.645905e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

GenotypeQuality
all individuals: 405
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11314
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.330459100442787e-4
allele num: 8582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65950
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16038
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

FS
type: SiteQuality
SIO_000300: 3.435e0

MQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.48e-1

QD
type: SiteQuality
SIO_000300: 1.232e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.215e0

DP
type: SiteQuality
SIO_000300: 1.660167e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-2

GenotypeQuality
all individuals: 212
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16108
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.716284492809949e-5
allele num: 10292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66094
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.313e0

DP
type: SiteQuality
SIO_000300: 1.675617e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.16e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.692e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4212
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.01504507492387e-5
allele num: 66334
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.692646e6

VQSLOD
type: SiteQuality
SIO_000300: -6.939e-1

FS
type: SiteQuality
SIO_000300: 1.0039e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.082e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.24e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

QD
type: SiteQuality
SIO_000300: 1.403e1

MQRankSum
type: SiteQuality
SIO_000300: 8.22e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1410
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.117704637220115e-5
allele num: 16346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.789e0

MQRankSum
type: SiteQuality
SIO_000300: -1.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.73e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.70624e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.144e1

GenotypeQuality
all individuals: 302
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1416
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4246
bin: 9.75e1
variant carriers: 39

GenotypeQuality
all individuals: 1402
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45361
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.202067556196658e-4
allele num: 66552
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.277682718161818e-4
allele num: 16364
num of homozygotes: 0

East Asian
type: Population
allele count: 23
allele frequency: 2.6583448913546e-3
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.69414014953921e-5
allele num: 11502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.75e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.82e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.17e0

QD
type: SiteQuality
SIO_000300: 1.234e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1

DP
type: SiteQuality
SIO_000300: 1.708177e6

FS
type: SiteQuality
SIO_000300: 1.261e0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6001
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.512922226229114e-5
allele num: 66552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

QD
type: SiteQuality
SIO_000300: 1.234e1

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 1.261e0

DP
type: SiteQuality
SIO_000300: 1.708177e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.75e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.17e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4218
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.796257796257797e-4
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.212389380530973e-3
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.46e-1

DP
type: SiteQuality
SIO_000300: 1.712566e6

MQRankSum
type: SiteQuality
SIO_000300: -2.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.481e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.009e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 3.114e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.274e0

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

DP
type: SiteQuality
SIO_000300: 1.713261e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: 8.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

QD
type: SiteQuality
SIO_000300: 1.542e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.99e0

QD
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DP
type: SiteQuality
SIO_000300: 1.713535e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.26e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999580058791769e-5
allele num: 66676
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.095e-1

QD
type: SiteQuality
SIO_000300: 7.75e0

DP
type: SiteQuality
SIO_000300: 1.713679e6

MQRankSum
type: SiteQuality
SIO_000300: 9.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.004e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.271e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214919207872676e-4
allele num: 16462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.325e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.714105e6

VQSLOD
type: SiteQuality
SIO_000300: -1.998e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

QD
type: SiteQuality
SIO_000300: 1.07e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: -1.032e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.713604e6

MQ
type: SiteQuality
SIO_000300: 5.72e1

FS
type: SiteQuality
SIO_000300: 7.2e-1

QD
type: SiteQuality
SIO_000300: 1.439e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.087e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.66e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500600240096038e-5
allele num: 66640
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.004e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 8.882e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.85e-1

DP
type: SiteQuality
SIO_000300: 1.712794e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.38e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 135
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 90

GenotypeQuality
all individuals: 226
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variant carriers: 0

GenotypeQuality
all individuals: 727
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.178942165101334e-5
allele num: 16184
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.75377060680463e-4
allele num: 11404
num of homozygotes: 0

African
type: Population
allele count: 87
allele frequency: 8.426966292134831e-3
allele num: 10324
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66266
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

FS
type: SiteQuality
SIO_000300: 6.4e-1

DP
type: SiteQuality
SIO_000300: 1.700801e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-2

QD
type: SiteQuality
SIO_000300: 1.42e1

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1380
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.532332209623046e-4
allele num: 6526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66236
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.287000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -9.73e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.904e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.55e-1

DP
type: SiteQuality
SIO_000300: 1.695892e6

QD
type: SiteQuality
SIO_000300: 1.531e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 293
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16092
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515059693351918e-5
allele num: 66004
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.326e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.687811e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.128193218764515e-4
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65954
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6508
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African
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16070
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Other
type: Population
allele count: 0
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allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.971e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-2

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.665e0

MQRankSum
type: SiteQuality
SIO_000300: 4.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.686092e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.294058408862034e-5
allele num: 15888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65372
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1280
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.004141905276428e-5
allele num: 11106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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African
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South Asian
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8378
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64694
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
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DP
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1227
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9998
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.558360604643914e-5
allele num: 64170
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8302
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10962
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

VQSLOD
type: SiteQuality
SIO_000300: 2.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.585857e6

QD
type: SiteQuality
SIO_000300: 8.43e0

MQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e-1

FS
type: SiteQuality
SIO_000300: 2.833e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1692
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34268
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10912
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.560841605793844e-5
allele num: 64068
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6270
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

QD
type: SiteQuality
SIO_000300: 1.186e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQ
type: SiteQuality
SIO_000300: 5.978e1

FS
type: SiteQuality
SIO_000300: 2.019e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.149999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.142e0

DP
type: SiteQuality
SIO_000300: 1.576552e6

GenotypeQuality
all individuals: 3470
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4185
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 283
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1069
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8066
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.8910741301059e-4
allele num: 10576
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.079e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.96e-1

DP
type: SiteQuality
SIO_000300: 1.406631e6

VQSLOD
type: SiteQuality
SIO_000300: 7.92e-1

QD
type: SiteQuality
SIO_000300: 1.237e1

GenotypeQuality
all individuals: 1044
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6939
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1012
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4182
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 309
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6056
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62166
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9668
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.255965837729214e-4
allele num: 7962
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

FS
type: SiteQuality
SIO_000300: 2.366e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.293e0

DP
type: SiteQuality
SIO_000300: 1.36599e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.68e-1

QD
type: SiteQuality
SIO_000300: 1.559e1

GenotypeQuality
all individuals: 2604
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7614
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4181
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 357
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15254
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.617442499919128e-5
allele num: 61826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.334e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.340884e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.298e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeQuality
all individuals: 630
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5809
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5222
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.104820037886761e-4
allele num: 9502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61120
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5980
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15138
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

DP
type: SiteQuality
SIO_000300: 1.316885e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.41e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.612e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.855e0