4-129043003-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043003
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043003
    reference: chr 4
allele count: 1
allele frequency: 1.18284403018618e-5
allele num: 84542
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1043G>T
  hgvsp: ENSP00000427281.1:p.Gly348Val
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1184G>T
  hgvsp: ENSP00000396521.1:p.Gly395Val
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1184G>T
  hgvsp: ENSP00000422850.1:p.Gly395Val
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1184G>T
  hgvsp: ENSP00000403586.1:p.Gly395Val
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-560G>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1184G>T
  hgvsp: ENSP00000321997.6:p.Gly395Val
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1089G>T
  hgvsp: ENSP00000424383.1:p.Gly364Val
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1043G>T
  hgvsp: ENSP00000264584.5:p.Gly348Val
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly395Val
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS

4-129043011-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043011
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043011
    reference: chr 4
allele count: 1
allele frequency: 1.08038029386344e-5
allele num: 92560
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1192A>T
  hgvsp: ENSP00000321997.6:p.Asn398Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1097A>T
  hgvsp: ENSP00000424383.1:p.Asn367Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-552A>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1051A>T
  hgvsp: ENSP00000264584.5:p.Asn351Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1192A>T
  hgvsp: ENSP00000403586.1:p.Asn398Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1192A>T
  hgvsp: ENSP00000422850.1:p.Asn398Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1192A>T
  hgvsp: ENSP00000396521.1:p.Asn398Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1051A>T
  hgvsp: ENSP00000427281.1:p.Asn351Tyr
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14100
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn398Tyr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP

4-129043018-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043018
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043018
    reference: chr 4
allele count: 1
allele frequency: 1.01181803464465e-5
allele num: 98832
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1058T>C
  hgvsp: ENSP00000427281.1:p.Leu353Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1199T>C
  hgvsp: ENSP00000403586.1:p.Leu400Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1199T>C
  hgvsp: ENSP00000396521.1:p.Leu400Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-545T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1058T>C
  hgvsp: ENSP00000264584.5:p.Leu353Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1199T>C
  hgvsp: ENSP00000321997.6:p.Leu400Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1104T>C
  hgvsp: ENSP00000424383.1:p.Leu369Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1199T>C
  hgvsp: ENSP00000422850.1:p.Leu400Pro
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10996
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37282
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11161
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu400Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/4-129043019-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043019
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043019
    reference: chr 4
allele count: 1
allele frequency: 1.002827974889188e-5
allele num: 99718
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1200A>C
  hgvsp: ENST00000441387.1:c.1200A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1059A>C
  hgvsp: ENST00000264584.5:c.1059A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1200A>C
  hgvsp: ENST00000326639.6:c.1200A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1105A>C
  hgvsp: ENST00000507377.1:c.1105A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1059A>C
  hgvsp: ENST00000508819.1:c.1059A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1200A>C
  hgvsp: ENST00000427266.1:c.1200A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1200A>C
  hgvsp: ENST00000512292.1:c.1200A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-544A>C
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37685
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4087
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu400Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD

4-129043019-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043019
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043019
    reference: chr 4
allele count: 6
allele frequency: 6.016967849335125e-5
allele num: 99718
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-544A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1059A>G
  hgvsp: ENST00000508819.1:c.1059A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1200A>G
  hgvsp: ENST00000427266.1:c.1200A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1200A>G
  hgvsp: ENST00000512292.1:c.1200A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1059A>G
  hgvsp: ENST00000264584.5:c.1059A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1105A>G
  hgvsp: ENST00000507377.1:c.1105A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1200A>G
  hgvsp: ENST00000326639.6:c.1200A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1200A>G
  hgvsp: ENST00000441387.1:c.1200A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10756
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35489
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu400Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum

4-129043020-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043020
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043020
    reference: chr 4
allele count: 34
allele frequency: 3.388073979591837e-4
allele num: 100352
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1106T>C
  hgvsp: ENSP00000424383.1:p.Cys370Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1201T>C
  hgvsp: ENSP00000403586.1:p.Cys401Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1201T>C
  hgvsp: ENSP00000321997.6:p.Cys401Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1060T>C
  hgvsp: ENSP00000264584.5:p.Cys354Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1201T>C
  hgvsp: ENSP00000422850.1:p.Cys401Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-543T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1201T>C
  hgvsp: ENSP00000396521.1:p.Cys401Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1060T>C
  hgvsp: ENSP00000427281.1:p.Cys354Arg
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37972
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5731
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 10271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 9.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 35659
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Cys401Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

4-129043021-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043021
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043021
    reference: chr 4
allele count: 1
allele frequency: 9.895307645114686e-6
allele num: 101058
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1107G>A
  hgvsp: ENSP00000424383.1:p.Cys370Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1202G>A
  hgvsp: ENSP00000396521.1:p.Cys401Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1202G>A
  hgvsp: ENSP00000422850.1:p.Cys401Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1061G>A
  hgvsp: ENSP00000427281.1:p.Cys354Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-542G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1202G>A
  hgvsp: ENSP00000321997.6:p.Cys401Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1202G>A
  hgvsp: ENSP00000403586.1:p.Cys401Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1061G>A
  hgvsp: ENSP00000264584.5:p.Cys354Tyr
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9916
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1084
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10080
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Cys401Tyr
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

4-129043022-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043022
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043022
    reference: chr 4
allele count: 1
allele frequency: 9.829748751621909e-6
allele num: 101732
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-541T>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1203T>G
  hgvsp: ENSP00000321997.6:p.Cys401Trp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1203T>G
  hgvsp: ENSP00000403586.1:p.Cys401Trp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1203T>G
  hgvsp: ENSP00000422850.1:p.Cys401Trp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1203T>G
  hgvsp: ENSP00000396521.1:p.Cys401Trp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1108T>G
  hgvsp: ENSP00000424383.1:p.Cys370Trp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1062T>G
  hgvsp: ENSP00000427281.1:p.Cys354Trp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1062T>G
  hgvsp: ENSP00000264584.5:p.Cys354Trp
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1457
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4187
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Cys401Trp
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP

4-129043027-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043027
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043027
    reference: chr 4
allele count: 1
allele frequency: 9.586808551433227e-6
allele num: 104310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1113C>T
  hgvsp: ENSP00000424383.1:p.Ser372Leu
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1067C>T
  hgvsp: ENSP00000264584.5:p.Ser356Leu
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1208C>T
  hgvsp: ENSP00000422850.1:p.Ser403Leu
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-536C>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1208C>T
  hgvsp: ENSP00000403586.1:p.Ser403Leu
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1067C>T
  hgvsp: ENSP00000427281.1:p.Ser356Leu
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1208C>T
  hgvsp: ENSP00000321997.6:p.Ser403Leu
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1208C>T
  hgvsp: ENSP00000396521.1:p.Ser403Leu
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7039
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser403Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

4-129043033-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043033
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043033
    reference: chr 4
allele count: 4
allele frequency: 3.692830369836962e-5
allele num: 108318
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1214A>G
  hgvsp: ENSP00000321997.6:p.Glu405Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1214A>G
  hgvsp: ENSP00000422850.1:p.Glu405Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-530A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1119A>G
  hgvsp: ENSP00000424383.1:p.Glu374Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1214A>G
  hgvsp: ENSP00000403586.1:p.Glu405Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1073A>G
  hgvsp: ENSP00000264584.5:p.Glu358Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1214A>G
  hgvsp: ENSP00000396521.1:p.Glu405Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1073A>G
  hgvsp: ENSP00000427281.1:p.Glu358Gly
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6413
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu405Gly
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

4-129043035-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043035
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043035
    reference: chr 4
allele count: 1
allele frequency: 9.138762977043427e-6
allele num: 109424
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1075C>G
  hgvsp: ENSP00000427281.1:p.Pro359Ala
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-528C>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1216C>G
  hgvsp: ENSP00000403586.1:p.Pro406Ala
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1216C>G
  hgvsp: ENSP00000396521.1:p.Pro406Ala
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1216C>G
  hgvsp: ENSP00000321997.6:p.Pro406Ala
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1075C>G
  hgvsp: ENSP00000264584.5:p.Pro359Ala
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1121C>G
  hgvsp: ENSP00000424383.1:p.Pro375Ala
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1216C>G
  hgvsp: ENSP00000422850.1:p.Pro406Ala
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8533
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4867
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1720
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro406Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/4-129043043-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043043
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043043
    reference: chr 4
allele count: 1
allele frequency: 8.777011252128426e-6
allele num: 113934
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1129A>C
  hgvsp: ENSP00000424383.1:p.Gln377His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1224A>C
  hgvsp: ENSP00000321997.6:p.Gln408His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1224A>C
  hgvsp: ENSP00000422850.1:p.Gln408His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1224A>C
  hgvsp: ENSP00000396521.1:p.Gln408His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1224A>C
  hgvsp: ENSP00000403586.1:p.Gln408His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-520A>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1083A>C
  hgvsp: ENSP00000264584.5:p.Gln361His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1083A>C
  hgvsp: ENSP00000427281.1:p.Gln361His
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2790
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5365
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln408His
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

4-129043054-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043054
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043054
    reference: chr 4
allele count: 1
allele frequency: 8.495454931611589e-6
allele num: 117710
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1235A>G
  hgvsp: ENSP00000403586.1:p.Asp412Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1094A>G
  hgvsp: ENSP00000264584.5:p.Asp365Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1094A>G
  hgvsp: ENSP00000427281.1:p.Asp365Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1235A>G
  hgvsp: ENSP00000321997.6:p.Asp412Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1235A>G
  hgvsp: ENSP00000422850.1:p.Asp412Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1235A>G
  hgvsp: ENSP00000396521.1:p.Asp412Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-509A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1140A>G
  hgvsp: ENSP00000424383.1:p.Asp381Gly
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp412Gly
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

4-129043071-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043071
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043071
    reference: chr 4
allele count: 2
allele frequency: 1.665584037042589e-5
allele num: 120078
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1157G>A
  hgvsp: ENSP00000424383.1:p.Glu387Lys
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-492G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1252G>A
  hgvsp: ENSP00000396521.1:p.Glu418Lys
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1111G>A
  hgvsp: ENSP00000427281.1:p.Glu371Lys
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1252G>A
  hgvsp: ENSP00000321997.6:p.Glu418Lys
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1252G>A
  hgvsp: ENSP00000422850.1:p.Glu418Lys
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1111G>A
  hgvsp: ENSP00000264584.5:p.Glu371Lys
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1252G>A
  hgvsp: ENSP00000403586.1:p.Glu418Lys
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11368
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43345
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2084
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1521
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu418Lys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS

4-129043072-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043072
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043072
    reference: chr 4
allele count: 1
allele frequency: 8.321959988016378e-6
allele num: 120164
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1253A>G
  hgvsp: ENSP00000403586.1:p.Glu418Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1112A>G
  hgvsp: ENSP00000264584.5:p.Glu371Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1253A>G
  hgvsp: ENSP00000396521.1:p.Glu418Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1158A>G
  hgvsp: ENSP00000424383.1:p.Glu387Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1253A>G
  hgvsp: ENSP00000321997.6:p.Glu418Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1253A>G
  hgvsp: ENSP00000422850.1:p.Glu418Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1112A>G
  hgvsp: ENSP00000427281.1:p.Glu371Gly
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-491A>G
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2419
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu418Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

4-129043087-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043087
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043087
    reference: chr 4
allele count: 1
allele frequency: 8.278282753025713e-6
allele num: 120798
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1173G>A
  hgvsp: ENSP00000424383.1:p.Gly392Glu
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1127G>A
  hgvsp: ENSP00000264584.5:p.Gly376Glu
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1268G>A
  hgvsp: ENSP00000396521.1:p.Gly423Glu
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1268G>A
  hgvsp: ENSP00000321997.6:p.Gly423Glu
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1268G>A
  hgvsp: ENSP00000422850.1:p.Gly423Glu
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1268G>A
  hgvsp: ENSP00000403586.1:p.Gly423Glu
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1127G>A
  hgvsp: ENSP00000427281.1:p.Gly376Glu
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-476G>A
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45165
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly423Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

4-129043088-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043088
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043088
    reference: chr 4
allele count: 2
allele frequency: 1.655355073663301e-5
allele num: 120820
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1269A>G
  hgvsp: ENST00000441387.1:c.1269A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1269A>G
  hgvsp: ENST00000512292.1:c.1269A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1128A>G
  hgvsp: ENST00000264584.5:c.1128A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1174A>G
  hgvsp: ENST00000507377.1:c.1174A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1128A>G
  hgvsp: ENST00000508819.1:c.1128A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1269A>G
  hgvsp: ENST00000427266.1:c.1269A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-475A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1269A>G
  hgvsp: ENST00000326639.6:c.1269A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6193
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2174
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly423Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

4-129043089-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043089
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043089
    reference: chr 4
allele count: 1
allele frequency: 8.275679433281473e-6
allele num: 120836
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1270C>T
  hgvsp: ENSP00000321997.6:p.Arg424Ter
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1175C>T
  hgvsp: ENSP00000424383.1:p.Arg393Ter
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1129C>T
  hgvsp: ENSP00000264584.5:p.Arg377Ter
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1270C>T
  hgvsp: ENSP00000422850.1:p.Arg424Ter
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1129C>T
  hgvsp: ENSP00000427281.1:p.Arg377Ter
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1270C>T
  hgvsp: ENSP00000403586.1:p.Arg424Ter
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-474C>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1270C>T
  hgvsp: ENSP00000396521.1:p.Arg424Ter
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45103
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg424Ter
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum

4-129043090-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043090
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043090
    reference: chr 4
allele count: 2
allele frequency: 1.654642928056125e-5
allele num: 120872
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-473G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1130G>A
  hgvsp: ENSP00000427281.1:p.Arg377Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1271G>A
  hgvsp: ENSP00000403586.1:p.Arg424Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1176G>A
  hgvsp: ENSP00000424383.1:p.Arg393Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1130G>A
  hgvsp: ENSP00000264584.5:p.Arg377Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1271G>A
  hgvsp: ENSP00000422850.1:p.Arg424Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1271G>A
  hgvsp: ENSP00000321997.6:p.Arg424Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1271G>A
  hgvsp: ENSP00000396521.1:p.Arg424Gln
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11748
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43132
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1264
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg424Gln
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS

4-129043094-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043094
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043094
    reference: chr 4
allele count: 1
allele frequency: 8.266239026567692e-6
allele num: 120974
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1275A>G
  hgvsp: ENST00000441387.1:c.1275A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1275A>G
  hgvsp: ENST00000326639.6:c.1275A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-469A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1180A>G
  hgvsp: ENST00000507377.1:c.1180A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1275A>G
  hgvsp: ENST00000427266.1:c.1275A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1134A>G
  hgvsp: ENST00000264584.5:c.1134A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1275A>G
  hgvsp: ENST00000512292.1:c.1275A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1134A>G
  hgvsp: ENST00000508819.1:c.1134A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3858
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6234
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys425Lys
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/4-129043095-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043095
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043095
    reference: chr 4
allele count: 2
allele frequency: 1.653029175964956e-5
allele num: 120990
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1276A>C
  hgvsp: ENSP00000396521.1:p.Asn426His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1276A>C
  hgvsp: ENSP00000422850.1:p.Asn426His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1181A>C
  hgvsp: ENSP00000424383.1:p.Asn395His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1135A>C
  hgvsp: ENSP00000427281.1:p.Asn379His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1276A>C
  hgvsp: ENSP00000403586.1:p.Asn426His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1135A>C
  hgvsp: ENSP00000264584.5:p.Asn379His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1276A>C
  hgvsp: ENSP00000321997.6:p.Asn426His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-468A>C
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn426His
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/4-129043100-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043100
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043100
    reference: chr 4
allele count: 1
allele frequency: 8.260639703938672e-6
allele num: 121056
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1140A>C
  hgvsp: ENST00000264584.5:c.1140A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-463A>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1281A>C
  hgvsp: ENST00000427266.1:c.1281A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1140A>C
  hgvsp: ENST00000508819.1:c.1140A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1186A>C
  hgvsp: ENST00000507377.1:c.1186A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1281A>C
  hgvsp: ENST00000512292.1:c.1281A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1281A>C
  hgvsp: ENST00000326639.6:c.1281A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1281A>C
  hgvsp: ENST00000441387.1:c.1281A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr427Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP

4-129043100-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043100
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043100
    reference: chr 4
allele count: 1
allele frequency: 8.260639703938672e-6
allele num: 121056
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1281A>G
  hgvsp: ENST00000427266.1:c.1281A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1281A>G
  hgvsp: ENST00000326639.6:c.1281A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1281A>G
  hgvsp: ENST00000441387.1:c.1281A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1140A>G
  hgvsp: ENST00000264584.5:c.1140A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-463A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1186A>G
  hgvsp: ENST00000507377.1:c.1186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1140A>G
  hgvsp: ENST00000508819.1:c.1140A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1281A>G
  hgvsp: ENST00000512292.1:c.1281A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr427Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/4-129043104-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043104
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043103
    reference: chr 4
allele count: 1
allele frequency: 8.259548037531387e-6
allele num: 121072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1145delC
  hgvsp: ENSP00000264584.5:p.Thr382MetfsTer17
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-458delC
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1286delC
  hgvsp: ENSP00000422850.1:p.Thr429MetfsTer17
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1286delC
  hgvsp: ENSP00000321997.6:p.Thr429MetfsTer17
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1286delC
  hgvsp: ENSP00000403586.1:p.Thr429MetfsTer17
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1286delC
  hgvsp: ENSP00000396521.1:p.Thr429MetfsTer17
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1191delC
  hgvsp: ENSP00000424383.1:p.Thr398MetfsTer17
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1145delC
  hgvsp: ENSP00000427281.1:p.Thr382MetfsTer17
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr429MetfsTer17
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: AC
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ

4-129043113-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043113
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043113
    reference: chr 4
allele count: 1
allele frequency: 8.25559316436886e-6
allele num: 121130
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1294T>C
  hgvsp: ENSP00000321997.6:p.Ser432Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1294T>C
  hgvsp: ENSP00000396521.1:p.Ser432Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1294T>C
  hgvsp: ENSP00000422850.1:p.Ser432Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1153T>C
  hgvsp: ENSP00000427281.1:p.Ser385Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1199T>C
  hgvsp: ENSP00000424383.1:p.Ser401Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-450T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1153T>C
  hgvsp: ENSP00000264584.5:p.Ser385Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1294T>C
  hgvsp: ENSP00000403586.1:p.Ser432Pro
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2567
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6264
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser432Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/4-129043157-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043157
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043157
    reference: chr 4
allele count: 1
allele frequency: 8.242664029014178e-6
allele num: 121320
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1243C>A
  hgvsp: ENSP00000424383.1:p.Asn415Lys
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-406C>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1338C>A
  hgvsp: ENSP00000321997.6:p.Asn446Lys
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1338C>A
  hgvsp: ENSP00000403586.1:p.Asn446Lys
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1338C>A
  hgvsp: ENSP00000422850.1:p.Asn446Lys
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1197C>A
  hgvsp: ENSP00000264584.5:p.Asn399Lys
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1338C>A
  hgvsp: ENSP00000396521.1:p.Asn446Lys
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1197C>A
  hgvsp: ENSP00000427281.1:p.Asn399Lys
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1707
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn446Lys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

4-129043172-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043172
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043172
    reference: chr 4
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1258A>G
  hgvsp: ENST00000507377.1:c.1258A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1353A>G
  hgvsp: ENST00000326639.6:c.1353A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1212A>G
  hgvsp: ENST00000264584.5:c.1212A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1212A>G
  hgvsp: ENST00000508819.1:c.1212A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-391A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1353A>G
  hgvsp: ENST00000441387.1:c.1353A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1353A>G
  hgvsp: ENST00000512292.1:c.1353A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1353A>G
  hgvsp: ENST00000427266.1:c.1353A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42638
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2284
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1720
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val451Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/4-129043182-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043182
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043182
    reference: chr 4
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1363C>A
  hgvsp: ENSP00000422850.1:p.Pro455Thr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1363C>A
  hgvsp: ENSP00000396521.1:p.Pro455Thr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1363C>A
  hgvsp: ENSP00000403586.1:p.Pro455Thr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1222C>A
  hgvsp: ENSP00000427281.1:p.Pro408Thr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1363C>A
  hgvsp: ENSP00000321997.6:p.Pro455Thr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1222C>A
  hgvsp: ENSP00000264584.5:p.Pro408Thr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1268C>A
  hgvsp: ENSP00000424383.1:p.Pro424Thr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-381C>A
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1733
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2677
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro455Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP

4-129043190-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043190
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043190
    reference: chr 4
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1371T>C
  hgvsp: ENST00000427266.1:c.1371T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1230T>C
  hgvsp: ENST00000508819.1:c.1230T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1371T>C
  hgvsp: ENST00000512292.1:c.1371T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1230T>C
  hgvsp: ENST00000264584.5:c.1230T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1276T>C
  hgvsp: ENST00000507377.1:c.1276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1371T>C
  hgvsp: ENST00000441387.1:c.1371T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-373T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1371T>C
  hgvsp: ENST00000326639.6:c.1371T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12007
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Tyr457Tyr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-129043204-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043204
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043204
    reference: chr 4
allele count: 4
allele frequency: 3.296087544085171e-5
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-359C>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1244C>A
  hgvsp: ENSP00000264584.5:p.Pro415His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1290C>A
  hgvsp: ENSP00000424383.1:p.Pro431His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1385C>A
  hgvsp: ENSP00000321997.6:p.Pro462His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1385C>A
  hgvsp: ENSP00000422850.1:p.Pro462His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1385C>A
  hgvsp: ENSP00000403586.1:p.Pro462His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1385C>A
  hgvsp: ENSP00000396521.1:p.Pro462His
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1244C>A
  hgvsp: ENSP00000427281.1:p.Pro415His
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33087
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro462His
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

4-129043204-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043204
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043204
    reference: chr 4
allele count: 79233
allele frequency: 6.528972609512509e-1
allele num: 121356
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1244C>G
  hgvsp: ENSP00000427281.1:p.Pro415Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1385C>G
  hgvsp: ENSP00000396521.1:p.Pro462Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1385C>G
  hgvsp: ENSP00000403586.1:p.Pro462Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1290C>G
  hgvsp: ENSP00000424383.1:p.Pro431Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1385C>G
  hgvsp: ENSP00000422850.1:p.Pro462Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1385C>G
  hgvsp: ENSP00000321997.6:p.Pro462Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1244C>G
  hgvsp: ENSP00000264584.5:p.Pro415Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-359C>G
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33087
  bin: 9.75e1
  variant carriers: 33056
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 2.75e1
  variant carriers: 231
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.75e1
  variant carriers: 1250
genotype depth: GenotypeDepth
  all individuals: 5877
  bin: 2.25e1
  variant carriers: 187
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 8.25e1
  variant carriers: 2536
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 6.25e1
  variant carriers: 1441
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.25e1
  variant carriers: 251
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 7.25e1
  variant carriers: 2051
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.25e1
  variant carriers: 885
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 3.75e1
  variant carriers: 274
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 9.25e1
  variant carriers: 2747
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 7.75e1
  variant carriers: 2252
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 8.75e1
  variant carriers: 2707
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 1718
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.25e1
  variant carriers: 451
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 653
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 6.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 6827
  bin: 6.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 18
hgvs: p.Pro462Arg
num of homozygotes: 26429
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

4-129043215-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043215
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043215
    reference: chr 4
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-348C>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1396C>T
  hgvsp: ENSP00000422850.1:p.Arg466Ter
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1396C>T
  hgvsp: ENSP00000396521.1:p.Arg466Ter
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1396C>T
  hgvsp: ENSP00000321997.6:p.Arg466Ter
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1255C>T
  hgvsp: ENSP00000264584.5:p.Arg419Ter
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1396C>T
  hgvsp: ENSP00000403586.1:p.Arg466Ter
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1255C>T
  hgvsp: ENSP00000427281.1:p.Arg419Ter
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1301C>T
  hgvsp: ENSP00000424383.1:p.Arg435Ter
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25477
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3591
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51310
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg466Ter
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

4-129043216-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043216
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043216
    reference: chr 4
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1397G>A
  hgvsp: ENSP00000321997.6:p.Arg466Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1256G>A
  hgvsp: ENSP00000264584.5:p.Arg419Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1397G>A
  hgvsp: ENSP00000422850.1:p.Arg466Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1302G>A
  hgvsp: ENSP00000424383.1:p.Arg435Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1397G>A
  hgvsp: ENSP00000396521.1:p.Arg466Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1397G>A
  hgvsp: ENSP00000403586.1:p.Arg466Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-347G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1256G>A
  hgvsp: ENSP00000427281.1:p.Arg419Gln
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25477
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3591
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7224
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg466Gln
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-129043222-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043222
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043222
    reference: chr 4
allele count: 21
allele frequency: 1.730617088607595e-4
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1403G>A
  hgvsp: ENSP00000396521.1:p.Gly468Asp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1403G>A
  hgvsp: ENSP00000321997.6:p.Gly468Asp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1403G>A
  hgvsp: ENSP00000422850.1:p.Gly468Asp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1403G>A
  hgvsp: ENSP00000403586.1:p.Gly468Asp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1262G>A
  hgvsp: ENSP00000427281.1:p.Gly421Asp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-341G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1308G>A
  hgvsp: ENSP00000424383.1:p.Gly437Asp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1262G>A
  hgvsp: ENSP00000264584.5:p.Gly421Asp
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25483
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly468Asp
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

4-129043225-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043225
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043225
    reference: chr 4
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1406C>T
  hgvsp: ENSP00000321997.6:p.Thr469Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-338C>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1406C>T
  hgvsp: ENSP00000403586.1:p.Thr469Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1406C>T
  hgvsp: ENSP00000422850.1:p.Thr469Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1406C>T
  hgvsp: ENSP00000396521.1:p.Thr469Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1265C>T
  hgvsp: ENSP00000264584.5:p.Thr422Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1311C>T
  hgvsp: ENSP00000424383.1:p.Thr438Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1265C>T
  hgvsp: ENSP00000427281.1:p.Thr422Ile
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3591
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25480
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7222
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr469Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

4-129043230-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043230
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043230
    reference: chr 4
allele count: 8
allele frequency: 6.592718342590609e-5
allele num: 121346
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1411A>G
  hgvsp: ENSP00000396521.1:p.Met471Val
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1316A>G
  hgvsp: ENSP00000424383.1:p.Met440Val
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1411A>G
  hgvsp: ENSP00000422850.1:p.Met471Val
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-333A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1270A>G
  hgvsp: ENSP00000264584.5:p.Met424Val
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1411A>G
  hgvsp: ENSP00000321997.6:p.Met471Val
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1270A>G
  hgvsp: ENSP00000427281.1:p.Met424Val
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1411A>G
  hgvsp: ENSP00000403586.1:p.Met471Val
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25482
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Met471Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/4-129043234-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043234
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043234
    reference: chr 4
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-329C>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1415C>A
  hgvsp: ENSP00000321997.6:p.Ser472Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1274C>A
  hgvsp: ENSP00000264584.5:p.Ser425Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1274C>A
  hgvsp: ENSP00000427281.1:p.Ser425Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1415C>A
  hgvsp: ENSP00000422850.1:p.Ser472Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1320C>A
  hgvsp: ENSP00000424383.1:p.Ser441Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1415C>A
  hgvsp: ENSP00000403586.1:p.Ser472Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1415C>A
  hgvsp: ENSP00000396521.1:p.Ser472Tyr
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25477
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51310
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser472Tyr
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

4-129043236-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043236
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043236
    reference: chr 4
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1276C>T
  hgvsp: ENSP00000427281.1:p.Arg426Trp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1417C>T
  hgvsp: ENSP00000396521.1:p.Arg473Trp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1322C>T
  hgvsp: ENSP00000424383.1:p.Arg442Trp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1417C>T
  hgvsp: ENSP00000403586.1:p.Arg473Trp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1276C>T
  hgvsp: ENSP00000264584.5:p.Arg426Trp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1417C>T
  hgvsp: ENSP00000422850.1:p.Arg473Trp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1417C>T
  hgvsp: ENSP00000321997.6:p.Arg473Trp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-327C>T
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25478
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7191
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg473Trp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

4-129043237-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043237
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043237
    reference: chr 4
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1418G>A
  hgvsp: ENSP00000321997.6:p.Arg473Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1323G>A
  hgvsp: ENSP00000424383.1:p.Arg442Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1277G>A
  hgvsp: ENSP00000427281.1:p.Arg426Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1418G>A
  hgvsp: ENSP00000422850.1:p.Arg473Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-326G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1418G>A
  hgvsp: ENSP00000396521.1:p.Arg473Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1277G>A
  hgvsp: ENSP00000264584.5:p.Arg426Gln
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1418G>A
  hgvsp: ENSP00000403586.1:p.Arg473Gln
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25477
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg473Gln
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

4-129043237-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043237
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043237
    reference: chr 4
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1323G>C
  hgvsp: ENSP00000424383.1:p.Arg442Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1418G>C
  hgvsp: ENSP00000403586.1:p.Arg473Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-326G>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1418G>C
  hgvsp: ENSP00000321997.6:p.Arg473Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1418G>C
  hgvsp: ENSP00000396521.1:p.Arg473Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1418G>C
  hgvsp: ENSP00000422850.1:p.Arg473Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1277G>C
  hgvsp: ENSP00000427281.1:p.Arg426Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1277G>C
  hgvsp: ENSP00000264584.5:p.Arg426Pro
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25477
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg473Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/4-129043247-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043247
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043247
    reference: chr 4
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1428C>A
  hgvsp: ENST00000427266.1:c.1428C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1287C>A
  hgvsp: ENST00000508819.1:c.1287C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1428C>A
  hgvsp: ENST00000326639.6:c.1428C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1333C>A
  hgvsp: ENST00000507377.1:c.1333C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1287C>A
  hgvsp: ENST00000264584.5:c.1287C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1428C>A
  hgvsp: ENST00000512292.1:c.1428C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-316C>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1428C>A
  hgvsp: ENST00000441387.1:c.1428C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25478
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile476Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

4-129043249-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043249
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043249
    reference: chr 4
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1430C>T
  hgvsp: ENSP00000321997.6:p.Thr477Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1335C>T
  hgvsp: ENSP00000424383.1:p.Thr446Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1430C>T
  hgvsp: ENSP00000403586.1:p.Thr477Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1430C>T
  hgvsp: ENSP00000396521.1:p.Thr477Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1430C>T
  hgvsp: ENSP00000422850.1:p.Thr477Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1289C>T
  hgvsp: ENSP00000427281.1:p.Thr430Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1289C>T
  hgvsp: ENSP00000264584.5:p.Thr430Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-314C>T
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25478
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr477Ile
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

4-129043260-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043260
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043260
    reference: chr 4
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1346G>T
  hgvsp: ENSP00000424383.1:p.Ala450Ser
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1441G>T
  hgvsp: ENSP00000396521.1:p.Ala481Ser
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1441G>T
  hgvsp: ENSP00000321997.6:p.Ala481Ser
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1300G>T
  hgvsp: ENSP00000427281.1:p.Ala434Ser
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1441G>T
  hgvsp: ENSP00000403586.1:p.Ala481Ser
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1441G>T
  hgvsp: ENSP00000422850.1:p.Ala481Ser
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-303G>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1300G>T
  hgvsp: ENSP00000264584.5:p.Ala434Ser
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6009
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25477
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7164
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala481Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

4-129043273-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043273
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043273
    reference: chr 4
allele count: 8
allele frequency: 6.59337036609689e-5
allele num: 121334
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1454A>G
  hgvsp: ENSP00000403586.1:p.Asn485Ser
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-290A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1313A>G
  hgvsp: ENSP00000264584.5:p.Asn438Ser
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1454A>G
  hgvsp: ENSP00000422850.1:p.Asn485Ser
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.2A>G
  hgvsp: ENSP00000423686.1:p.Asn1?
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1454A>G
  hgvsp: ENSP00000396521.1:p.Asn485Ser
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1313A>G
  hgvsp: ENSP00000427281.1:p.Asn438Ser
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1454A>G
  hgvsp: ENSP00000321997.6:p.Asn485Ser
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1359A>G
  hgvsp: ENSP00000424383.1:p.Asn454Ser
  variant of: http://identifiers.org/hgnc/24704
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3591
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25479
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn1?
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

4-129043281-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043281
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043281
    reference: chr 4
allele count: 1
allele frequency: 8.241848811525402e-6
allele num: 121332
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1462T>C
  hgvsp: ENST00000427266.1:c.1462T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.10T>C
  hgvsp: ENST00000507259.1:c.10T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1321T>C
  hgvsp: ENST00000264584.5:c.1321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1462T>C
  hgvsp: ENST00000326639.6:c.1462T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1367T>C
  hgvsp: ENST00000507377.1:c.1367T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1321T>C
  hgvsp: ENST00000508819.1:c.1321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1462T>C
  hgvsp: ENST00000441387.1:c.1462T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-282T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1462T>C
  hgvsp: ENST00000512292.1:c.1462T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25479
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51312
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Leu488Leu
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

4-129043283-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043283
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043283
    reference: chr 4
allele count: 2
allele frequency: 1.648424106554134e-5
allele num: 121328
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1369A>G
  hgvsp: ENST00000507377.1:c.1369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1464A>G
  hgvsp: ENST00000427266.1:c.1464A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1323A>G
  hgvsp: ENST00000508819.1:c.1323A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1464A>G
  hgvsp: ENST00000512292.1:c.1464A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1323A>G
  hgvsp: ENST00000264584.5:c.1323A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1464A>G
  hgvsp: ENST00000441387.1:c.1464A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.12A>G
  hgvsp: ENST00000507259.1:c.12A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1464A>G
  hgvsp: ENST00000326639.6:c.1464A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-280A>G
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25479
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51312
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu488Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

4-129043286-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043286
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043286
    reference: chr 4
allele count: 79211
allele frequency: 6.530603832074663e-1
allele num: 121292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1326C>T
  hgvsp: ENST00000264584.5:c.1326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1467C>T
  hgvsp: ENST00000441387.1:c.1467C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1467C>T
  hgvsp: ENST00000326639.6:c.1467C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-277C>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1326C>T
  hgvsp: ENST00000508819.1:c.1326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1372C>T
  hgvsp: ENST00000507377.1:c.1372C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.15C>T
  hgvsp: ENST00000507259.1:c.15C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1467C>T
  hgvsp: ENST00000427266.1:c.1467C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1467C>T
  hgvsp: ENST00000512292.1:c.1467C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29871
  bin: 9.75e1
  variant carriers: 29847
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 628
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 3.25e1
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 8.75e1
  variant carriers: 3235
genotype depth: GenotypeDepth
  all individuals: 5900
  bin: 2.25e1
  variant carriers: 223
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 415
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 5.25e1
  variant carriers: 924
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 7.25e1
  variant carriers: 2378
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 2.75e1
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 3.75e1
  variant carriers: 255
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 5.75e1
  variant carriers: 1275
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 6.75e1
  variant carriers: 2000
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 9.25e1
  variant carriers: 3562
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 7.75e1
  variant carriers: 2722
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 6.25e1
  variant carriers: 1585
genotype depth: GenotypeDepth
  all individuals: 3129
  bin: 8.25e1
  variant carriers: 3128
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 4
hgvs: p.Tyr489Tyr
num of homozygotes: 26419
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

4-129043302-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043302
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043302
    reference: chr 4
allele count: 1
allele frequency: 8.257774694875225e-6
allele num: 121098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1483C>T
  hgvsp: ENST00000427266.1:c.1483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1342C>T
  hgvsp: ENST00000264584.5:c.1342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.31C>T
  hgvsp: ENST00000507259.1:c.31C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1483C>T
  hgvsp: ENST00000326639.6:c.1483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1342C>T
  hgvsp: ENST00000508819.1:c.1342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1483C>T
  hgvsp: ENST00000441387.1:c.1483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1388C>T
  hgvsp: ENST00000507377.1:c.1388C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1483C>T
  hgvsp: ENST00000512292.1:c.1483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-261C>T
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38082
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu495Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP

4-129043305-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043305
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043305
    reference: chr 4
allele count: 1
allele frequency: 8.259138737012504e-6
allele num: 121078
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.34T>C
  hgvsp: ENSP00000423686.1:p.Trp12Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1486T>C
  hgvsp: ENSP00000422850.1:p.Trp496Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1486T>C
  hgvsp: ENSP00000321997.6:p.Trp496Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1345T>C
  hgvsp: ENSP00000427281.1:p.Trp449Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1486T>C
  hgvsp: ENSP00000396521.1:p.Trp496Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1345T>C
  hgvsp: ENSP00000264584.5:p.Trp449Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1391T>C
  hgvsp: ENSP00000424383.1:p.Trp465Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1486T>C
  hgvsp: ENSP00000403586.1:p.Trp496Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-258T>C
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10540
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Trp496Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-129043312-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043312
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043312
    reference: chr 4
allele count: 1
allele frequency: 8.262414277451872e-6
allele num: 121030
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1398A>C
  hgvsp: ENSP00000424383.1:p.Glu467Ala
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1493A>C
  hgvsp: ENSP00000396521.1:p.Glu498Ala
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1352A>C
  hgvsp: ENSP00000264584.5:p.Glu451Ala
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1352A>C
  hgvsp: ENSP00000427281.1:p.Glu451Ala
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-251A>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.41A>C
  hgvsp: ENSP00000423686.1:p.Glu14Ala
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1493A>C
  hgvsp: ENSP00000422850.1:p.Glu498Ala
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1493A>C
  hgvsp: ENSP00000321997.6:p.Glu498Ala
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1493A>C
  hgvsp: ENSP00000403586.1:p.Glu498Ala
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15312
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu498Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

4-129043316-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043316
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043316
    reference: chr 4
allele count: 2
allele frequency: 1.652701340340787e-5
allele num: 121014
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1497A>T
  hgvsp: ENSP00000403586.1:p.Glu499Asp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-247A>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.45A>T
  hgvsp: ENSP00000423686.1:p.Glu15Asp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1497A>T
  hgvsp: ENSP00000321997.6:p.Glu499Asp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1497A>T
  hgvsp: ENSP00000396521.1:p.Glu499Asp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1356A>T
  hgvsp: ENSP00000264584.5:p.Glu452Asp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1497A>T
  hgvsp: ENSP00000422850.1:p.Glu499Asp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1402A>T
  hgvsp: ENSP00000424383.1:p.Glu468Asp
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1356A>T
  hgvsp: ENSP00000427281.1:p.Glu452Asp
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10547
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2387
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu499Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

4-129043329-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043329
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043329
    reference: chr 4
allele count: 231
allele frequency: 1.910606762389995e-3
allele num: 120904
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1510C>T
  hgvsp: ENSP00000396521.1:p.His504Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1369C>T
  hgvsp: ENSP00000427281.1:p.His457Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-234C>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1415C>T
  hgvsp: ENSP00000424383.1:p.His473Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.58C>T
  hgvsp: ENSP00000423686.1:p.His20Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1510C>T
  hgvsp: ENSP00000422850.1:p.His504Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1510C>T
  hgvsp: ENSP00000403586.1:p.His504Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1369C>T
  hgvsp: ENSP00000264584.5:p.His457Tyr
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1510C>T
  hgvsp: ENSP00000321997.6:p.His504Tyr
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.75e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24414
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 15264
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10423
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His504Tyr
num of homozygotes: 2
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

4-129043346-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043346
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043346
    reference: chr 4
allele count: 1
allele frequency: 8.30827005200977e-6
allele num: 120362
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1432A>G
  hgvsp: ENST00000507377.1:c.1432A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+3A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+3A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1527A>G
  hgvsp: ENST00000427266.1:c.1527A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+3A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1524+3A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+3A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+3A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+3A>G
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2871
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 9.25e1
  variant carriers: 0
hgvs: c.1524+3A>G
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

4-129043363-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043363
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043363
    reference: chr 4
allele count: 1
allele frequency: 8.404350091607416e-6
allele num: 118986
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1544A>G
  hgvsp: ENSP00000403586.1:p.His515Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+20A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+20A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+20A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+20A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+20A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1449A>G
  hgvsp: ENSP00000424383.1:p.His484Arg
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+20A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1524+20A>G
  variant of: http://identifiers.org/hgnc/24704
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14707
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1849
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His484Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

4-129043368-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043368
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043368
    reference: chr 4
allele count: 1
allele frequency: 8.446802040747373e-6
allele num: 118388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1549T>C
  hgvsp: ENSP00000403586.1:p.Ser517Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+25T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+25T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+25T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1454T>C
  hgvsp: ENSP00000424383.1:p.Ser486Pro
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1524+25T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+25T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+25T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+25T>C
  variant of: http://identifiers.org/hgnc/24704
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2790
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2640
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser486Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
reference allele: T
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

4-129043372-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043372
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043372
    reference: chr 4
allele count: 3
allele frequency: 2.54612734031538e-5
allele num: 117826
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.1553C>T
  hgvsp: ENSP00000403586.1:p.Thr518Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+29C>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+29C>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+29C>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1524+29C>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+29C>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.1458C>T
  hgvsp: ENSP00000424383.1:p.Thr487Ile
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+29C>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+29C>T
  variant of: http://identifiers.org/hgnc/24704
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3868
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2785
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35400
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr487Ile
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

4-129043391-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043391
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043391
    reference: chr 4
allele count: 1
allele frequency: 8.684023134237629e-6
allele num: 115154
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+48G>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.*3G>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+48G>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.*3G>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+48G>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+48G>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1524+48G>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+48G>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+48G>C
  variant of: http://identifiers.org/hgnc/24704
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21289
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5035
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

4-129043398-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043398
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043398
    reference: chr 4
allele count: 2
allele frequency: 1.748954999387866e-5
allele num: 114354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.*10G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+55G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.*10G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+55G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+55G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+55G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+55G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1524+55G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+55G>A
  variant of: http://identifiers.org/hgnc/24704
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8926
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8199
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5407
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

4-129043401-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043401
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043401
    reference: chr 4
allele count: 5
allele frequency: 4.39035526754825e-5
allele num: 113886
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+58G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+58G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1524+58G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+58G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.*13G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+58G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.*13G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+58G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+58G>A
  variant of: http://identifiers.org/hgnc/24704
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3007
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13581
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8853
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8124
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32142
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-129043405-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043405
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043405
    reference: chr 4
allele count: 1
allele frequency: 8.830957805683604e-6
allele num: 113238
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+62A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.*17A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+62A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1524+62A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.*17A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+62A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+62A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+62A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+62A>G
  variant of: http://identifiers.org/hgnc/24704
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6061
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1792
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum

4-129043405-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043405
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043405
    reference: chr 4
allele count: 1
allele frequency: 8.830957805683604e-6
allele num: 113238
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+62A>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+62A>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+62A>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1524+62A>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+62A>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.*17A>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+62A>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.*17A>T
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+62A>T
  variant of: http://identifiers.org/hgnc/24704
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7953
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2671
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

4-129043407-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043407
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043407
    reference: chr 4
allele count: 2
allele frequency: 1.770851779706039e-5
allele num: 112940
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+64A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.*19A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+64A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1524+64A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+64A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+64A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.*19A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+64A>G
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+64A>G
  variant of: http://identifiers.org/hgnc/24704
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4815
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19932
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13094
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2657
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30610
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum

4-129043419-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043419
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043419
    reference: chr 4
allele count: 1
allele frequency: 9.036688957166094e-6
allele num: 110660
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+76T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+76T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1524+76T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.*31T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+76T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+76T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.*31T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+76T>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+76T>C
  variant of: http://identifiers.org/hgnc/24704
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3876
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6892
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25592
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6920
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1711
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-129043421-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043421
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043421
    reference: chr 4
allele count: 3
allele frequency: 2.723608236191306e-5
allele num: 110148
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+78G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+78G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+78G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.*33G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.*33G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1524+78G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+78G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+78G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+78G>A
  variant of: http://identifiers.org/hgnc/24704
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7024
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10770
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2482
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7322
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

4-129043424-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043424
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043424
    reference: chr 4
allele count: 1
allele frequency: 9.149800534348351e-6
allele num: 109292
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+81G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+81G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+81G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+81G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000424383
  ensembl transcript: ENST00000507377
  gene symbol: LARP1B
  hgvsc: ENST00000507377.1:c.*36G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1524+81G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000403586
  ensembl transcript: ENST00000427266
  gene symbol: LARP1B
  hgvsc: ENST00000427266.1:c.*36G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+81G>A
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+81G>A
  variant of: http://identifiers.org/hgnc/24704
canonical: false
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6994
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7269
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4057
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6392
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/4-129043587-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043587
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043587
    reference: chr 4
allele count: 1
allele frequency: 1.090750436300175e-4
allele num: 9168
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+244A>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1525-50A>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+244A>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+244A>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+244A>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+244A>C
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+244A>C
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5039
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5854
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1403
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

4-129043590-C-CTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043590
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043592
    reference: chr 4
allele count: 1
allele frequency: 2.35626767200754e-4
allele num: 4244
alternate allele: CTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+248_1383+249dupTT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+248_1524+249dupTT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+248_72+249dupTT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1525-46_1525-45dupTT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+248_1383+249dupTT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+248_-220+249dupTT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+248_1524+249dupTT
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

4-129043592-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043592
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043591
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 4056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+250delG
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+250delG
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+250delG
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+250delG
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+250delG
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+250delG
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1525-44delG
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2080
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: TG
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

4-129043593-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043593
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043594
    reference: chr 4
allele count: 12
allele frequency: 3.838771593090211e-3
allele num: 3126
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+265dupT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+265dupT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+265dupT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+265dupT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+265dupT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+265dupT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1525-29dupT
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2314
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum

4-129043593-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043593
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043593
    reference: chr 4
allele count: 2
allele frequency: 6.397952655150352e-4
allele num: 3126
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1628
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2314
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 72
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.075268817204301e-3
  allele num: 930
  num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 9.09090909090909e-3
  allele num: 110
  num of homozygotes: 0
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

4-129043593-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 129043593
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 129043592
    reference: chr 4
allele count: 13
allele frequency: 4.158669225847729e-3
allele num: 3126
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000321997
  ensembl transcript: ENST00000326639
  gene symbol: LARP1B
  hgvsc: ENST00000326639.6:c.1524+265delT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000396521
  ensembl transcript: ENST00000441387
  gene symbol: LARP1B
  hgvsc: ENST00000441387.1:c.1524+265delT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000346444
  ensembl transcript: ENST00000354456
  gene symbol: LARP1B
  hgvsc: ENST00000354456.3:c.-220+265delT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000422850
  ensembl transcript: ENST00000512292
  gene symbol: LARP1B
  hgvsc: ENST00000512292.1:c.1525-29delT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000264584
  ensembl transcript: ENST00000264584
  gene symbol: LARP1B
  hgvsc: ENST00000264584.5:c.1383+265delT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000423686
  ensembl transcript: ENST00000507259
  gene symbol: LARP1B
  hgvsc: ENST00000507259.1:c.72+265delT
  variant of: http://identifiers.org/hgnc/24704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138709
  ensembl protein: ENSP00000427281
  ensembl transcript: ENST00000508819
  gene symbol: LARP1B
  hgvsc: ENST00000508819.1:c.1383+265delT
  variant of: http://identifiers.org/hgnc/24704
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
reference allele: GT

GenotypeQuality
all individuals: 534
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17806
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29288
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3088
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1022
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 927
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5672
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8272
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8032
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.154336679736309e-5
allele num: 46418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8764
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.312e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

DP
type: SiteQuality
SIO_000300: 1.086245e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

VQSLOD
type: SiteQuality
SIO_000300: -1.802e0

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

MQ
type: SiteQuality
SIO_000300: 5.398e1

QD
type: SiteQuality
SIO_000300: 1.419e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.62e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 713
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 906
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32380
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7270
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5918
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.95786670843449e-5
allele num: 51076
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9978
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.216e1

VQSLOD
type: SiteQuality
SIO_000300: -8.658e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.658e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.336e0

DP
type: SiteQuality
SIO_000300: 1.154211e6

GenotypeQuality
all individuals: 384
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 613
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4047
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35128
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8734
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.303101381287464e-4
allele num: 7674
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.883e-1

MQ
type: SiteQuality
SIO_000300: 5.533e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.363e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.21114e6

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 693
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1410
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35489
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1041
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 853
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6150
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.136363636363636e-4
allele num: 8800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55026
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9962
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

MQ
type: SiteQuality
SIO_000300: 5.763e1

VQSLOD
type: SiteQuality
SIO_000300: 2.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

DP
type: SiteQuality
SIO_000300: 1.21868e6

FS
type: SiteQuality
SIO_000300: 5.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

QD
type: SiteQuality
SIO_000300: 1.317e1

GenotypeQuality
all individuals: 210
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1041
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4087
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 324
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variant carriers: 0

GenotypeQuality
all individuals: 841
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variant carriers: 0

GenotypeQuality
all individuals: 1410
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 853
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 9.086613600843237e-5
allele num: 55026
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.003814495081309e-4
allele num: 9962
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7726
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.01e-1

DP
type: SiteQuality
SIO_000300: 1.21868e6

MQ
type: SiteQuality
SIO_000300: 5.763e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

QD
type: SiteQuality
SIO_000300: 1.317e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

VQSLOD
type: SiteQuality
SIO_000300: 2.57e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

GenotypeQuality
all individuals: 10430
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4114
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.264633617574794e-4
allele num: 55352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 25
allele frequency: 4.051863857374392e-3
allele num: 6170
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.577319587628866e-3
allele num: 776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10022
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.4e-1

DP
type: SiteQuality
SIO_000300: 1.225075e6

FS
type: SiteQuality
SIO_000300: 6.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.99e-1

QD
type: SiteQuality
SIO_000300: 1.27e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

MQ
type: SiteQuality
SIO_000300: 5.764e1

GenotypeQuality
all individuals: 784
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 3.75e1
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GenotypeQuality
all individuals: 283
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1000
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4133
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35928
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1312
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.794172527630257e-5
allele num: 55736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.617e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.774e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.369e0

DP
type: SiteQuality
SIO_000300: 1.232191e6

QD
type: SiteQuality
SIO_000300: 1.377e1

GenotypeQuality
all individuals: 885
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 808
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1331
bin: 7.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1085
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variant carriers: 1

GenotypeQuality
all individuals: 722
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8894
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.848335631278314e-5
allele num: 10154
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7842
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56110
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.27e-1

QD
type: SiteQuality
SIO_000300: 1.284e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.279e0

MQ
type: SiteQuality
SIO_000300: 5.268e1

DP
type: SiteQuality
SIO_000300: 1.238129e6

GenotypeQuality
all individuals: 34110
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 8416
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1090
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variant carriers: 1

GenotypeQuality
all individuals: 4328
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.738646637457403e-5
allele num: 57516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9032
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7968
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.322e0

VQSLOD
type: SiteQuality
SIO_000300: -1.373e0

DP
type: SiteQuality
SIO_000300: 1.270659e6

MQRankSum
type: SiteQuality
SIO_000300: -3.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

QD
type: SiteQuality
SIO_000300: 1.191e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.054e0

MQ
type: SiteQuality
SIO_000300: 5.665e1

FS
type: SiteQuality
SIO_000300: 1.805e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

GenotypeQuality
all individuals: 409
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1032
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1102
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variant carriers: 4

GenotypeQuality
all individuals: 38305
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variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.01295570955107e-4
allele num: 13276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8140
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.599e0

QD
type: SiteQuality
SIO_000300: 1.381e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.02e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.28e-1

DP
type: SiteQuality
SIO_000300: 1.313647e6

GenotypeQuality
all individuals: 679
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1104
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variant carriers: 1

GenotypeQuality
all individuals: 6064
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 771
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 766
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1548
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variant carriers: 0

GenotypeQuality
all individuals: 370
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variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60272
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.381163271331562e-5
allele num: 13548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8192
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-2

DP
type: SiteQuality
SIO_000300: 1.327089e6

VQSLOD
type: SiteQuality
SIO_000300: -1.596e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.81e0

MQ
type: SiteQuality
SIO_000300: 5.773e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.705e1

MQRankSum
type: SiteQuality
SIO_000300: 1.96e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1979
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3863
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8374
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.597290994473373e-5
allele num: 62606
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.793e0

VQSLOD
type: SiteQuality
SIO_000300: -3.124e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

DP
type: SiteQuality
SIO_000300: 1.380933e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.617e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.34e0

QD
type: SiteQuality
SIO_000300: 9.69e0

MQ
type: SiteQuality
SIO_000300: 5.88e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1935
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GenotypeQuality
all individuals: 1345
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.548275221403357e-5
allele num: 64588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 1.935e1

VQSLOD
type: SiteQuality
SIO_000300: -9.417e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.35e0

DP
type: SiteQuality
SIO_000300: 1.422797e6

GenotypeQuality
all individuals: 705
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 100
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variant carriers: 0

GenotypeQuality
all individuals: 13
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GenotypeQuality
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GenotypeQuality
all individuals: 4
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 45091
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.222942399412988e-4
allele num: 16354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65942
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.576e0

MQRankSum
type: SiteQuality
SIO_000300: 2.5e0

QD
type: SiteQuality
SIO_000300: 1.173e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.078e0

MQ
type: SiteQuality
SIO_000300: 5.479e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.64e-1

DP
type: SiteQuality
SIO_000300: 1.452935e6

FS
type: SiteQuality
SIO_000300: 1.964e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 500
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GenotypeQuality
all individuals: 97
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GenotypeQuality
all individuals: 134
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GenotypeQuality
all individuals: 1217
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GenotypeQuality
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GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 664
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variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515335192144502e-5
allele num: 65992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
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East Asian
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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InbreedingCoeff
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VQSLOD
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MQ
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DP
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FS
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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East Asian
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Other
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Latino
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African
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South Asian
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European (Non-Finnish)
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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FS
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DP
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InbreedingCoeff
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MQ
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QD
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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allele num: 10316
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East Asian
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Latino
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Other
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South Asian
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European (Finnish)
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
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BaseQRankSum
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QD
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DP
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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European (Non-Finnish)
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East Asian
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African
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South Asian
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Other
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QD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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MQ
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VQSLOD
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FS
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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European (Non-Finnish)
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allele num: 66406
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East Asian
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Latino
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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DP
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ClippingRankSum
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MQ
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MQRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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FS
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InbreedingCoeff
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DP
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QD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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Other
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East Asian
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South Asian
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MQ
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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MQRankSum
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VQSLOD
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QD
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FS
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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Other
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Latino
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European (Non-Finnish)
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South Asian
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ClippingRankSum
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FS
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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QD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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FS
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.323e0

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.471111e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.31e-1

FS
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.054e0

MQ
type: SiteQuality
SIO_000300: 5.793e1

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502403846153846e-5
allele num: 66560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.447e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 1.473292e6

MQRankSum
type: SiteQuality
SIO_000300: 1.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.47e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.119e0

QD
type: SiteQuality
SIO_000300: 1.333e1

MQ
type: SiteQuality
SIO_000300: 5.584e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.74e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.132e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.43e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.285e0

DP
type: SiteQuality
SIO_000300: 1.478944e6

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

FS
type: SiteQuality
SIO_000300: 1.6667e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.132e0

MQ
type: SiteQuality
SIO_000300: 4.944e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.03e-1

MQ
type: SiteQuality
SIO_000300: 5.035e1

VQSLOD
type: SiteQuality
SIO_000300: -1.515e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

DP
type: SiteQuality
SIO_000300: 1.479888e6

MQRankSum
type: SiteQuality
SIO_000300: 6.36e-1

FS
type: SiteQuality
SIO_000300: 1.693e0

QD
type: SiteQuality
SIO_000300: 9.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.562e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.029e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.987e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.3e-2

FS
type: SiteQuality
SIO_000300: 4.465e0

QD
type: SiteQuality
SIO_000300: 2.45e1

MQRankSum
type: SiteQuality
SIO_000300: 4.05e-1

MQ
type: SiteQuality
SIO_000300: 5.078e1

DP
type: SiteQuality
SIO_000300: 1.481133e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
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VQSLOD
type: SiteQuality
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ClippingRankSum
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.6e-1

MQ
type: SiteQuality
SIO_000300: 5.704e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.23e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 908
num of homozygotes: 0

South Asian
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allele frequency: 2.422774076317383e-4
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8644
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MQ
type: SiteQuality
SIO_000300: 5.559e1

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 8.159999999999999e-1

DP
type: SiteQuality
SIO_000300: 6.071886e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.631e0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

East Asian
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allele count: 4337
allele frequency: 5.017353077279038e-1
allele num: 8644
num of homozygotes: 1119

South Asian
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allele count: 12558
allele frequency: 7.606299212598425e-1
allele num: 16510
num of homozygotes: 4800

Latino
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allele frequency: 7.149274360746372e-1
allele num: 11576
num of homozygotes: 2955

European (Non-Finnish)
type: Population
allele count: 44782
allele frequency: 6.712332873673481e-1
allele num: 66716
num of homozygotes: 15071

European (Finnish)
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allele count: 3996
allele frequency: 6.043557168784029e-1
allele num: 6612
num of homozygotes: 1210

African
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allele count: 4657
allele frequency: 4.482194417709336e-1
allele num: 10390
num of homozygotes: 1054

Other
type: Population
allele count: 627
allele frequency: 6.905286343612335e-1
allele num: 908
num of homozygotes: 220

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

MQ
type: SiteQuality
SIO_000300: 5.559e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 6.071886e6

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.17e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.631e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 198
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

Latino
type: Population
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allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
type: Population
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Other
type: Population
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allele num: 908
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FS
type: SiteQuality
SIO_000300: 6.66e-1

ClippingRankSum
type: SiteQuality
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MQRankSum
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SIO_000300: 2.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.21e-1

QD
type: SiteQuality
SIO_000300: 2.515e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.025e0

MQ
type: SiteQuality
SIO_000300: 5.557e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 5.315122e6

VQSLOD
type: SiteQuality
SIO_000300: -3.634e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.731e1

FS
type: SiteQuality
SIO_000300: 1.509e0

VQSLOD
type: SiteQuality
SIO_000300: -1.508e0

InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.665e0

QD
type: SiteQuality
SIO_000300: 9.710000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 5.315121e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.24e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 21

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

South Asian
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allele count: 20
allele frequency: 1.211827435773146e-3
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.247e1

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

BaseQRankSum
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SIO_000300: -2.944e0

VQSLOD
type: SiteQuality
SIO_000300: -7.492e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.785e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-2

DP
type: SiteQuality
SIO_000300: 5.315133e6

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.248e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 4.79e0

MQRankSum
type: SiteQuality
SIO_000300: 2.03e0

MQ
type: SiteQuality
SIO_000300: 5.621e1

DP
type: SiteQuality
SIO_000300: 5.314856e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.111e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

QD
type: SiteQuality
SIO_000300: 1.311e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.049223574554829e-4
allele num: 66716
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.778e1

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.52e-1

DP
type: SiteQuality
SIO_000300: 5.314726e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.293e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.679e1

MQRankSum
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DP
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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VQSLOD
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QD
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.97e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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ClippingRankSum
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MQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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FS
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BaseQRankSum
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DP
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ReadPosRankSum
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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num of homozygotes: 0

South Asian
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VQSLOD
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ClippingRankSum
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QD
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

South Asian
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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ClippingRankSum
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MQ
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FS
type: SiteQuality
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.792e0

QD
type: SiteQuality
SIO_000300: 1.34e1

InbreedingCoeff
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SIO_000300: 1.0e-4

DP
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SIO_000300: 5.314292e6

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

FS
type: SiteQuality
SIO_000300: 8.795e0

MQ
type: SiteQuality
SIO_000300: 5.761e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.49e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.472e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.726e1

FS
type: SiteQuality
SIO_000300: 7.28e-1

MQ
type: SiteQuality
SIO_000300: 5.861e1

DP
type: SiteQuality
SIO_000300: 5.314186e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.86e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.569e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.81e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e-1

QD
type: SiteQuality
SIO_000300: 4.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.72e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.252e0

DP
type: SiteQuality
SIO_000300: 5.313931e6

FS
type: SiteQuality
SIO_000300: 7.745e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.011e0

MQ
type: SiteQuality
SIO_000300: 5.888e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.43e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 263
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.468208092485549e-4
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.497211728728189e-5
allele num: 66708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.16e-1

MQ
type: SiteQuality
SIO_000300: 5.803e1

VQSLOD
type: SiteQuality
SIO_000300: -4.967e-1

QD
type: SiteQuality
SIO_000300: 1.64e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.12e-1

DP
type: SiteQuality
SIO_000300: 5.313668e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-1

GenotypeQuality
all individuals: 168
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 266
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GenotypeQuality
all individuals: 240
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.81e0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 5.313678e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.03e-2

FS
type: SiteQuality
SIO_000300: 2.578e0

VQSLOD
type: SiteQuality
SIO_000300: -1.667e0

MQ
type: SiteQuality
SIO_000300: 5.852e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.386e0

QD
type: SiteQuality
SIO_000300: 1.679e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.56e-1

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 242
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 64
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GenotypeQuality
all individuals: 734
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998141152485459e-5
allele num: 66708
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.887e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.07e0

QD
type: SiteQuality
SIO_000300: 1.801e1

VQSLOD
type: SiteQuality
SIO_000300: -2.334e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.313765e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.75e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.731e0

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 60
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variant carriers: 39

African
type: Population
allele count: 4660
allele frequency: 4.493731918997107e-1
allele num: 10370
num of homozygotes: 1055

Latino
type: Population
allele count: 8272
allele frequency: 7.1495246326707e-1
allele num: 11570
num of homozygotes: 2953

European (Finnish)
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allele count: 3996
allele frequency: 6.041729664348352e-1
allele num: 6614
num of homozygotes: 1210

European (Non-Finnish)
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allele count: 44760
allele frequency: 6.71245613508893e-1
allele num: 66682
num of homozygotes: 15061

East Asian
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allele count: 4336
allele frequency: 5.018518518518519e-1
allele num: 8640
num of homozygotes: 1119

South Asian
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allele count: 12560
allele frequency: 7.608432275260479e-1
allele num: 16508
num of homozygotes: 4801

Other
type: Population
allele count: 627
allele frequency: 6.905286343612335e-1
allele num: 908
num of homozygotes: 220

MQ
type: SiteQuality
SIO_000300: 5.803e1

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

FS
type: SiteQuality
SIO_000300: 5.16e-1

ClippingRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 2.424e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.15e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

DP
type: SiteQuality
SIO_000300: 5.650903e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Other
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.502087902184036e-5
allele num: 66574
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Latino
type: Population
allele count: 0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.803e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-2

MQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

BaseQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

FS
type: SiteQuality
SIO_000300: 7.333e0

QD
type: SiteQuality
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DP
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SIO_000300: 1.881315e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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South Asian
type: Population
allele count: 0
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allele num: 16484
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African
type: Population
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502448991856726e-5
allele num: 66558
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -2.472e0

VQSLOD
type: SiteQuality
SIO_000300: -1.095e0

DP
type: SiteQuality
SIO_000300: 1.88083e6

QD
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SIO_000300: 1.846e1

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.75e-1

FS
type: SiteQuality
SIO_000300: 5.277e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.38e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66526
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.686168151879117e-5
allele num: 10324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.682e1

FS
type: SiteQuality
SIO_000300: 3.3859e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.096e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

DP
type: SiteQuality
SIO_000300: 1.87974e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.104e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.361e0

QD
type: SiteQuality
SIO_000300: 2.523e1

MQRankSum
type: SiteQuality
SIO_000300: 5.07e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.006885768409658e-5
allele num: 66514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.34e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.35e-1

MQ
type: SiteQuality
SIO_000300: 5.866e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.581e0

DP
type: SiteQuality
SIO_000300: 1.879643e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 222
allele frequency: 2.15575839968926e-2
allele num: 10298
num of homozygotes: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.018838965963466e-5
allele num: 66458
num of homozygotes: 0

Latino
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allele count: 5
allele frequency: 4.332755632582322e-4
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
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MQ
type: SiteQuality
SIO_000300: 5.868e1

MQRankSum
type: SiteQuality
SIO_000300: 5.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

DP
type: SiteQuality
SIO_000300: 1.886381e6

FS
type: SiteQuality
SIO_000300: 5.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.152e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.03e-1

QD
type: SiteQuality
SIO_000300: 1.148e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509433962264151e-5
allele num: 66250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQ
type: SiteQuality
SIO_000300: 5.912e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

VQSLOD
type: SiteQuality
SIO_000300: -9.55e-2

QD
type: SiteQuality
SIO_000300: 1.459e1

DP
type: SiteQuality
SIO_000300: 1.859865e6

MQRankSum
type: SiteQuality
SIO_000300: 5.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.51e0

FS
type: SiteQuality
SIO_000300: 3.207e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15334
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65832
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
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African
type: Population
allele count: 1
allele frequency: 9.807767752059631e-5
allele num: 10196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.915e1

VQSLOD
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ClippingRankSum
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FS
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -9.03e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.674676278200507e-5
allele num: 14982
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65632
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
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Other
type: Population
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African
type: Population
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num of homozygotes: 0

DP
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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African
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Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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allele num: 11484
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QD
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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MQ
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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DP
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VQSLOD
type: SiteQuality
SIO_000300: 3.4e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
type: Population
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European (Finnish)
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South Asian
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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DP
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FS
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MQ
type: SiteQuality
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.115167751783434e-5
allele num: 64202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12964
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.03e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: -6.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.06e-1

QD
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SIO_000300: 2.552e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.47e0

DP
type: SiteQuality
SIO_000300: 1.744827e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.59e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.810791389383572e-5
allele num: 64014
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12782
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

DP
type: SiteQuality
SIO_000300: 1.734417e6

FS
type: SiteQuality
SIO_000300: 2.248e0

QD
type: SiteQuality
SIO_000300: 1.518e1

MQ
type: SiteQuality
SIO_000300: 5.906e1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-2

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 3.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12498
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.035840066293764e-4
allele num: 9654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63772
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.26e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.57e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.803e0

DP
type: SiteQuality
SIO_000300: 1.713872e6

QD
type: SiteQuality
SIO_000300: 1.378e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.75e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.568086307470363e-5
allele num: 63772
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.46e-1

FS
type: SiteQuality
SIO_000300: 6.803e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.75e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.713872e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.57e-1

QD
type: SiteQuality
SIO_000300: 1.378e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.619695497246518e-4
allele num: 12348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63664
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.025e1

DP
type: SiteQuality
SIO_000300: 1.703191e6

BaseQRankSum
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SIO_000300: 3.11e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.593422352528761e-5
allele num: 62758
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
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FS
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VQSLOD
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QD
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MQ
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BaseQRankSum
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DP
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 62566
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.677615137450911e-4
allele num: 11204
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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QD
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FS
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
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ClippingRankSum
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DP
type: SiteQuality
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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European (Non-Finnish)
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South Asian
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Latino
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East Asian
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African
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European (Finnish)
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FS
type: SiteQuality
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BaseQRankSum
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QD
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DP
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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MQ
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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African
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allele frequency: 3.333333333333334e-3
allele num: 300
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
type: Population
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FS
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VQSLOD
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QD
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InbreedingCoeff
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ReadPosRankSum
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SIO_000300: 6.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.49e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.658e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

DP
type: SiteQuality
SIO_000300: 1.93964e5

MQ
type: SiteQuality
SIO_000300: 5.415e1

GenotypeQuality
all individuals: 159
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3354
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 5.376344086021506e-3
allele num: 186
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

DP
type: SiteQuality
SIO_000300: 1.94754e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.825e0

MQ
type: SiteQuality
SIO_000300: 5.388e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.61e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-2

QD
type: SiteQuality
SIO_000300: 5.73e0

GenotypeQuality
all individuals: 333
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.93e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.27e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

DP
type: SiteQuality
SIO_000300: 1.94986e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.22e-1

MQ
type: SiteQuality
SIO_000300: 5.766e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

GenotypeQuality
all individuals: 1628
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 252
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 1

African
type: Population
allele count: 3
allele frequency: 2.727272727272727e-2
allele num: 110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 72
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1936
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 9.67741935483871e-3
allele num: 930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.749e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.973e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 1.194e0

DP
type: SiteQuality
SIO_000300: 1.95749e5

QD
type: SiteQuality
SIO_000300: 4.96e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.58e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1936
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 1.194e0

DP
type: SiteQuality
SIO_000300: 1.95749e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.973e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.749e1

VQSLOD
type: SiteQuality
SIO_000300: 2.58e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

QD
type: SiteQuality
SIO_000300: 4.96e0