4-2935519-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935519
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935519
    reference: chr 4
allele count: 3
allele frequency: 5.758157389635317e-5
allele num: 52100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.132C>T
  hgvsp: ENST00000507555.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.132C>T
  hgvsp: ENST00000507272.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.181C>T
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.132C>T
  hgvsp: ENST00000503596.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.132C>T
  hgvsp: ENST00000514800.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.132C>T
  hgvsp: ENST00000508221.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.132C>T
  hgvsp: ENST00000355443.4:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.132C>T
  hgvsp: ENST00000329687.4:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13015
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27191
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6612
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7082
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2080
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8001
  bin: 6.25e1
  variant carriers: 1
hgvs: p.Pro44Pro
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

4-2935523-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935523
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935523
    reference: chr 4
allele count: 1
allele frequency: 1.967574374311349e-5
allele num: 50824
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.128T>C
  hgvsp: ENSP00000425757.1:p.Leu43Pro
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.128T>C
  hgvsp: ENSP00000426907.1:p.Leu43Pro
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.128T>C
  hgvsp: ENSP00000423402.1:p.Leu43Pro
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.128T>C
  hgvsp: ENSP00000423509.1:p.Leu43Pro
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.128T>C
  hgvsp: ENSP00000427637.1:p.Leu43Pro
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.128T>C
  hgvsp: ENSP00000347619.4:p.Leu43Pro
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.128T>C
  hgvsp: ENSP00000332646.4:p.Leu43Pro
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.177T>C
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6846
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12603
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27623
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30867
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu43Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

4-2935527-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935527
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935527
    reference: chr 4
allele count: 1
allele frequency: 2.017349203147065e-5
allele num: 49570
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.124C>T
  hgvsp: ENST00000503596.1:c.124C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.124C>T
  hgvsp: ENST00000355443.4:c.124C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.124C>T
  hgvsp: ENST00000507555.1:c.124C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.173C>T
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.124C>T
  hgvsp: ENST00000329687.4:c.124C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.124C>T
  hgvsp: ENST00000508221.1:c.124C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.124C>T
  hgvsp: ENST00000507272.1:c.124C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.124C>T
  hgvsp: ENST00000514800.1:c.124C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4291
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27906
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12306
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7477
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu42Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

4-2935527-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935527
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935527
    reference: chr 4
allele count: 4
allele frequency: 8.06939681258826e-5
allele num: 49570
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.124C>A
  hgvsp: ENSP00000426907.1:p.Leu42Met
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.124C>A
  hgvsp: ENSP00000347619.4:p.Leu42Met
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.124C>A
  hgvsp: ENSP00000423509.1:p.Leu42Met
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.124C>A
  hgvsp: ENSP00000332646.4:p.Leu42Met
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.124C>A
  hgvsp: ENSP00000425757.1:p.Leu42Met
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.124C>A
  hgvsp: ENSP00000423402.1:p.Leu42Met
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.124C>A
  hgvsp: ENSP00000427637.1:p.Leu42Met
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.173C>A
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27906
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12306
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4291
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7477
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30406
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2869
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu42Met
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-2935528-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935528
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935528
    reference: chr 4
allele count: 4
allele frequency: 8.102742778430499e-5
allele num: 49366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.123G>T
  hgvsp: ENST00000514800.1:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.123G>T
  hgvsp: ENST00000508221.1:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.123G>T
  hgvsp: ENST00000503596.1:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.172G>T
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.123G>T
  hgvsp: ENST00000507555.1:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.123G>T
  hgvsp: ENST00000355443.4:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.123G>T
  hgvsp: ENST00000329687.4:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.123G>T
  hgvsp: ENST00000507272.1:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12231
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7035
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28020
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7464
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7723
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30810
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu41Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

4-2935530-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935530
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935530
    reference: chr 4
allele count: 2
allele frequency: 4.079301623562046e-5
allele num: 49028
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.121C>G
  hgvsp: ENSP00000347619.4:p.Leu41Val
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.121C>G
  hgvsp: ENSP00000425757.1:p.Leu41Val
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.170C>G
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.121C>G
  hgvsp: ENSP00000427637.1:p.Leu41Val
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.121C>G
  hgvsp: ENSP00000423509.1:p.Leu41Val
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.121C>G
  hgvsp: ENSP00000332646.4:p.Leu41Val
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.121C>G
  hgvsp: ENSP00000426907.1:p.Leu41Val
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.121C>G
  hgvsp: ENSP00000423402.1:p.Leu41Val
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28198
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12060
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30815
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7523
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu41Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

4-2935531-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935531
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935531
    reference: chr 4
allele count: 28
allele frequency: 5.759420766825737e-4
allele num: 48616
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.120G>A
  hgvsp: ENST00000508221.1:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.120G>A
  hgvsp: ENST00000514800.1:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.120G>A
  hgvsp: ENST00000507555.1:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.120G>A
  hgvsp: ENST00000329687.4:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.120G>A
  hgvsp: ENST00000507272.1:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.120G>A
  hgvsp: ENST00000355443.4:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.169G>A
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.120G>A
  hgvsp: ENST00000503596.1:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12015
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28209
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2578
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1406
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 9.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 30556
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr40Thr
num of homozygotes: 1
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

4-2935544-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935544
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935543
    reference: chr 4
allele count: 1
allele frequency: 2.179788996425146e-5
allele num: 45876
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.106delC
  hgvsp: ENSP00000423402.1:p.Leu36SerfsTer84
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.106delC
  hgvsp: ENSP00000332646.4:p.Leu36SerfsTer84
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.106delC
  hgvsp: ENSP00000426907.1:p.Leu36SerfsTer84
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.106delC
  hgvsp: ENSP00000423509.1:p.Leu36SerfsTer84
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.106delC
  hgvsp: ENSP00000347619.4:p.Leu36SerfsTer84
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.106delC
  hgvsp: ENSP00000425757.1:p.Leu36SerfsTer84
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.155delC
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.106delC
  hgvsp: ENSP00000427637.1:p.Leu36SerfsTer97
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7740
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11094
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29047
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7968
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu36SerfsTer84
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: AG
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP

4-2935552-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935552
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935552
    reference: chr 4
allele count: 3
allele frequency: 6.687472135532768e-5
allele num: 44860
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.99G>C
  hgvsp: ENST00000355443.4:c.99G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.99G>C
  hgvsp: ENST00000329687.4:c.99G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.99G>C
  hgvsp: ENST00000508221.1:c.99G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.99G>C
  hgvsp: ENST00000514800.1:c.99G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.99G>C
  hgvsp: ENST00000507272.1:c.99G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.99G>C
  hgvsp: ENST00000507555.1:c.99G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.148G>C
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.99G>C
  hgvsp: ENST00000503596.1:c.99G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10701
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7814
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29468
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2174
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu33Leu
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

4-2935557-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935557
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935557
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 44154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.94C>T
  hgvsp: ENSP00000426907.1:p.Leu32Phe
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.94C>T
  hgvsp: ENSP00000423509.1:p.Leu32Phe
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.94C>T
  hgvsp: ENSP00000427637.1:p.Leu32Phe
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.94C>T
  hgvsp: ENSP00000332646.4:p.Leu32Phe
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.94C>T
  hgvsp: ENSP00000423402.1:p.Leu32Phe
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.94C>T
  hgvsp: ENSP00000425757.1:p.Leu32Phe
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.143C>T
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.94C>T
  hgvsp: ENSP00000347619.4:p.Leu32Phe
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 8006
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10442
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29726
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1648
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1568
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32025
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu32Phe
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

4-2935561-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935561
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935561
    reference: chr 4
allele count: 1
allele frequency: 2.304997234003319e-5
allele num: 43384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.90C>T
  hgvsp: ENST00000514800.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.90C>T
  hgvsp: ENST00000329687.4:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.90C>T
  hgvsp: ENST00000503596.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.90C>T
  hgvsp: ENST00000355443.4:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.90C>T
  hgvsp: ENST00000508221.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.90C>T
  hgvsp: ENST00000507272.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.90C>T
  hgvsp: ENST00000507555.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.139C>T
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29914
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2050
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu30Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

4-2935561-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935561
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935561
    reference: chr 4
allele count: 1
allele frequency: 2.304997234003319e-5
allele num: 43384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.90C>G
  hgvsp: ENST00000508221.1:c.90C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.90C>G
  hgvsp: ENST00000329687.4:c.90C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.90C>G
  hgvsp: ENST00000507272.1:c.90C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.90C>G
  hgvsp: ENST00000507555.1:c.90C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.139C>G
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.90C>G
  hgvsp: ENST00000503596.1:c.90C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.90C>G
  hgvsp: ENST00000514800.1:c.90C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.90C>G
  hgvsp: ENST00000355443.4:c.90C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29914
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8256
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1998
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2050
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu30Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

4-2935571-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935571
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935571
    reference: chr 4
allele count: 3
allele frequency: 7.21119176962646e-5
allele num: 41602
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.80T>C
  hgvsp: ENSP00000423402.1:p.Val27Ala
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.80T>C
  hgvsp: ENSP00000425757.1:p.Val27Ala
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.80T>C
  hgvsp: ENSP00000332646.4:p.Val27Ala
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.80T>C
  hgvsp: ENSP00000423509.1:p.Val27Ala
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.80T>C
  hgvsp: ENSP00000347619.4:p.Val27Ala
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.80T>C
  hgvsp: ENSP00000427637.1:p.Val27Ala
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.129T>C
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.80T>C
  hgvsp: ENSP00000426907.1:p.Val27Ala
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29765
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9106
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9998
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9272
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1648
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val27Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

4-2935572-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935572
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935572
    reference: chr 4
allele count: 2
allele frequency: 4.835122328594914e-5
allele num: 41364
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.79G>A
  hgvsp: ENSP00000423509.1:p.Val27Ile
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.79G>A
  hgvsp: ENSP00000427637.1:p.Val27Ile
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.79G>A
  hgvsp: ENSP00000423402.1:p.Val27Ile
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.79G>A
  hgvsp: ENSP00000426907.1:p.Val27Ile
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.79G>A
  hgvsp: ENSP00000347619.4:p.Val27Ile
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.79G>A
  hgvsp: ENSP00000425757.1:p.Val27Ile
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.79G>A
  hgvsp: ENSP00000332646.4:p.Val27Ile
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.128G>A
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29798
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9934
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9091
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9323
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2365
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32142
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val27Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-2935583-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935583
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935583
    reference: chr 4
allele count: 3
allele frequency: 7.834943849569079e-5
allele num: 38290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.117G>T
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.68G>T
  hgvsp: ENSP00000423402.1:p.Arg23Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.68G>T
  hgvsp: ENSP00000423509.1:p.Arg23Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.68G>T
  hgvsp: ENSP00000426907.1:p.Arg23Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.68G>T
  hgvsp: ENSP00000425757.1:p.Arg23Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.68G>T
  hgvsp: ENSP00000332646.4:p.Arg23Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.68G>T
  hgvsp: ENSP00000427637.1:p.Arg23Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.68G>T
  hgvsp: ENSP00000347619.4:p.Arg23Leu
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10732
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9344
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6283
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg23Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS

4-2935583-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935583
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935583
    reference: chr 4
allele count: 2
allele frequency: 5.223295899712719e-5
allele num: 38290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.117G>A
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.68G>A
  hgvsp: ENSP00000347619.4:p.Arg23His
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.68G>A
  hgvsp: ENSP00000423509.1:p.Arg23His
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.68G>A
  hgvsp: ENSP00000332646.4:p.Arg23His
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.68G>A
  hgvsp: ENSP00000426907.1:p.Arg23His
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.68G>A
  hgvsp: ENSP00000427637.1:p.Arg23His
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.68G>A
  hgvsp: ENSP00000425757.1:p.Arg23His
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.68G>A
  hgvsp: ENSP00000423402.1:p.Arg23His
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9344
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29327
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10732
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3705
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29417
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg23His
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

4-2935585-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935585
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935585
    reference: chr 4
allele count: 3
allele frequency: 7.794637289544793e-5
allele num: 38488
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.66C>T
  hgvsp: ENST00000503596.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.66C>T
  hgvsp: ENST00000329687.4:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.66C>T
  hgvsp: ENST00000507555.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.66C>T
  hgvsp: ENST00000514800.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.66C>T
  hgvsp: ENST00000355443.4:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.66C>T
  hgvsp: ENST00000508221.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.66C>T
  hgvsp: ENST00000507272.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.115C>T
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10767
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29466
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6409
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30291
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg22Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD

4-2935587-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935587
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935587
    reference: chr 4
allele count: 1
allele frequency: 2.675513698630137e-5
allele num: 37376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.64C>T
  hgvsp: ENSP00000427637.1:p.Arg22Cys
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.64C>T
  hgvsp: ENSP00000425757.1:p.Arg22Cys
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.64C>T
  hgvsp: ENSP00000347619.4:p.Arg22Cys
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.64C>T
  hgvsp: ENSP00000423509.1:p.Arg22Cys
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.64C>T
  hgvsp: ENSP00000332646.4:p.Arg22Cys
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.113C>T
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.64C>T
  hgvsp: ENSP00000423402.1:p.Arg22Cys
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.64C>T
  hgvsp: ENSP00000426907.1:p.Arg22Cys
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9062
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6221
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11424
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg22Cys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

4-2935592-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935592
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935592
    reference: chr 4
allele count: 2
allele frequency: 5.49390176903637e-5
allele num: 36404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.108C>T
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.59C>T
  hgvsp: ENSP00000332646.4:p.Pro20Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.59C>T
  hgvsp: ENSP00000425757.1:p.Pro20Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.59C>T
  hgvsp: ENSP00000423509.1:p.Pro20Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.59C>T
  hgvsp: ENSP00000427637.1:p.Pro20Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.59C>T
  hgvsp: ENSP00000423402.1:p.Pro20Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.59C>T
  hgvsp: ENSP00000426907.1:p.Pro20Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.59C>T
  hgvsp: ENSP00000347619.4:p.Pro20Leu
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11767
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8774
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2035
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11966
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro20Leu
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

4-2935592-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935592
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935592
    reference: chr 4
allele count: 1
allele frequency: 2.746950884518185e-5
allele num: 36404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.59C>A
  hgvsp: ENSP00000423509.1:p.Pro20Gln
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.59C>A
  hgvsp: ENSP00000347619.4:p.Pro20Gln
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.59C>A
  hgvsp: ENSP00000332646.4:p.Pro20Gln
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.59C>A
  hgvsp: ENSP00000426907.1:p.Pro20Gln
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.59C>A
  hgvsp: ENSP00000425757.1:p.Pro20Gln
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.59C>A
  hgvsp: ENSP00000423402.1:p.Pro20Gln
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.59C>A
  hgvsp: ENSP00000427637.1:p.Pro20Gln
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.108C>A
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11767
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8774
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28765
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro20Gln
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD

4-2935594-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935594
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935594
    reference: chr 4
allele count: 1
allele frequency: 2.744387727098084e-5
allele num: 36438
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.106G>C
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.57G>C
  hgvsp: ENST00000503596.1:c.57G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.57G>C
  hgvsp: ENST00000508221.1:c.57G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.57G>C
  hgvsp: ENST00000514800.1:c.57G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.57G>C
  hgvsp: ENST00000507555.1:c.57G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.57G>C
  hgvsp: ENST00000355443.4:c.57G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.57G>C
  hgvsp: ENST00000507272.1:c.57G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.57G>C
  hgvsp: ENST00000329687.4:c.57G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11775
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8705
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2804
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12037
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro19Pro
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

4-2935594-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935594
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935594
    reference: chr 4
allele count: 1
allele frequency: 2.744387727098084e-5
allele num: 36438
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.106G>A
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.57G>A
  hgvsp: ENST00000355443.4:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.57G>A
  hgvsp: ENST00000503596.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.57G>A
  hgvsp: ENST00000329687.4:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.57G>A
  hgvsp: ENST00000514800.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.57G>A
  hgvsp: ENST00000507555.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.57G>A
  hgvsp: ENST00000507272.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.57G>A
  hgvsp: ENST00000508221.1:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11775
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8705
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1958
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29836
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro19Pro
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

4-2935595-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935595
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935595
    reference: chr 4
allele count: 1
allele frequency: 2.772540756349118e-5
allele num: 36068
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.56C>T
  hgvsp: ENSP00000425757.1:p.Pro19Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.56C>T
  hgvsp: ENSP00000332646.4:p.Pro19Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.56C>T
  hgvsp: ENSP00000347619.4:p.Pro19Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.56C>T
  hgvsp: ENSP00000423402.1:p.Pro19Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.105C>T
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.56C>T
  hgvsp: ENSP00000423509.1:p.Pro19Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.56C>T
  hgvsp: ENSP00000426907.1:p.Pro19Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.56C>T
  hgvsp: ENSP00000427637.1:p.Pro19Leu
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29074
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1992
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1511
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro19Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: G
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

4-2935607-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935607
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935607
    reference: chr 4
allele count: 1
allele frequency: 2.930832356389215e-5
allele num: 34120
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.44T>C
  hgvsp: ENSP00000332646.4:p.Ile15Thr
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.44T>C
  hgvsp: ENSP00000347619.4:p.Ile15Thr
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.44T>C
  hgvsp: ENSP00000426907.1:p.Ile15Thr
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.44T>C
  hgvsp: ENSP00000427637.1:p.Ile15Thr
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.44T>C
  hgvsp: ENSP00000425757.1:p.Ile15Thr
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.44T>C
  hgvsp: ENSP00000423509.1:p.Ile15Thr
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.44T>C
  hgvsp: ENSP00000423402.1:p.Ile15Thr
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.93T>C
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13960
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28126
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8055
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2798
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5948
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile15Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

4-2935608-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935608
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935608
    reference: chr 4
allele count: 1
allele frequency: 2.94967848504513e-5
allele num: 33902
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.43A>C
  hgvsp: ENSP00000423402.1:p.Ile15Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.43A>C
  hgvsp: ENSP00000425757.1:p.Ile15Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.92A>C
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.43A>C
  hgvsp: ENSP00000332646.4:p.Ile15Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.43A>C
  hgvsp: ENSP00000423509.1:p.Ile15Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.43A>C
  hgvsp: ENSP00000426907.1:p.Ile15Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.43A>C
  hgvsp: ENSP00000427637.1:p.Ile15Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.43A>C
  hgvsp: ENSP00000347619.4:p.Ile15Leu
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27998
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28013
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5919
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile15Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

4-2935616-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935616
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935616
    reference: chr 4
allele count: 17
allele frequency: 5.370908631366106e-4
allele num: 31652
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.35G>A
  hgvsp: ENSP00000425757.1:p.Arg12His
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.35G>A
  hgvsp: ENSP00000332646.4:p.Arg12His
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.35G>A
  hgvsp: ENSP00000423402.1:p.Arg12His
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.35G>A
  hgvsp: ENSP00000347619.4:p.Arg12His
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.35G>A
  hgvsp: ENSP00000423509.1:p.Arg12His
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.35G>A
  hgvsp: ENSP00000427637.1:p.Arg12His
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.35G>A
  hgvsp: ENSP00000426907.1:p.Arg12His
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.84G>A
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26869
  bin: 7.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7423
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15933
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3291
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25835
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16075
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1247
  bin: 6.75e1
  variant carriers: 2
hgvs: p.Arg12His
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

4-2935617-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935617
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935617
    reference: chr 4
allele count: 1
allele frequency: 3.249074013906037e-5
allele num: 30778
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.34C>A
  hgvsp: ENSP00000427637.1:p.Arg12Ser
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.34C>A
  hgvsp: ENSP00000423509.1:p.Arg12Ser
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.34C>A
  hgvsp: ENSP00000423402.1:p.Arg12Ser
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.34C>A
  hgvsp: ENSP00000425757.1:p.Arg12Ser
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.34C>A
  hgvsp: ENSP00000332646.4:p.Arg12Ser
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.34C>A
  hgvsp: ENSP00000426907.1:p.Arg12Ser
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.83C>A
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.34C>A
  hgvsp: ENSP00000347619.4:p.Arg12Ser
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16626
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2185
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4192
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg12Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

4-2935618-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935618
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935618
    reference: chr 4
allele count: 2537
allele frequency: 7.94550579392421e-2
allele num: 31930
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.33G>C
  hgvsp: ENST00000329687.4:c.33G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.33G>C
  hgvsp: ENST00000514800.1:c.33G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.33G>C
  hgvsp: ENST00000507272.1:c.33G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.33G>C
  hgvsp: ENST00000503596.1:c.33G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.33G>C
  hgvsp: ENST00000508221.1:c.33G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.33G>C
  hgvsp: ENST00000355443.4:c.33G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.33G>C
  hgvsp: ENST00000507555.1:c.33G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.82G>C
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 3.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 3.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 16098
  bin: 2.5e0
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 25862
  bin: 7.5e0
  variant carriers: 1698
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 2.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 7670
  bin: 1.25e1
  variant carriers: 1509
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 1.75e1
  variant carriers: 431
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 2.25e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 2351
  bin: 9.75e1
  variant carriers: 2222
genotype quality: GenotypeQuality
  all individuals: 3115
  bin: 1.75e1
  variant carriers: 153
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 3.75e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 9.25e1
  variant carriers: 163
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.75e1
  variant carriers: 122
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 7.75e1
  variant carriers: 130
hgvs: p.Pro11Pro
num of homozygotes: 108
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

4-2935618-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935618
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935618
    reference: chr 4
allele count: 1
allele frequency: 3.131850923896023e-5
allele num: 31930
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.33G>A
  hgvsp: ENST00000329687.4:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.33G>A
  hgvsp: ENST00000355443.4:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.33G>A
  hgvsp: ENST00000508221.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.33G>A
  hgvsp: ENST00000514800.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.33G>A
  hgvsp: ENST00000507272.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.33G>A
  hgvsp: ENST00000507555.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.82G>A
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.33G>A
  hgvsp: ENST00000503596.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7670
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25862
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16098
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1757
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro11Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

4-2935619-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935619
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935619
    reference: chr 4
allele count: 1
allele frequency: 3.34627225271048e-5
allele num: 29884
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.32C>T
  hgvsp: ENSP00000426907.1:p.Pro11Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.32C>T
  hgvsp: ENSP00000425757.1:p.Pro11Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.32C>T
  hgvsp: ENSP00000332646.4:p.Pro11Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.32C>T
  hgvsp: ENSP00000423402.1:p.Pro11Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.32C>T
  hgvsp: ENSP00000423509.1:p.Pro11Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.32C>T
  hgvsp: ENSP00000427637.1:p.Pro11Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.32C>T
  hgvsp: ENSP00000347619.4:p.Pro11Leu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.81C>T
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6847
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5783
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25823
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro11Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

4-2935635-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935635
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935635
    reference: chr 4
allele count: 1
allele frequency: 4.045634760093859e-5
allele num: 24718
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.16G>A
  hgvsp: ENSP00000332646.4:p.Gly6Ser
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.16G>A
  hgvsp: ENSP00000426907.1:p.Gly6Ser
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.65G>A
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.16G>A
  hgvsp: ENSP00000347619.4:p.Gly6Ser
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.16G>A
  hgvsp: ENSP00000425757.1:p.Gly6Ser
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.16G>A
  hgvsp: ENSP00000427637.1:p.Gly6Ser
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.16G>A
  hgvsp: ENSP00000423509.1:p.Gly6Ser
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.16G>A
  hgvsp: ENSP00000423402.1:p.Gly6Ser
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22986
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4983
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22842
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2902
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21304
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly6Ser
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

4-2935637-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935637
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935637
    reference: chr 4
allele count: 4
allele frequency: 1.698081168279844e-4
allele num: 23556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.14G>A
  hgvsp: ENSP00000425757.1:p.Gly5Glu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.14G>A
  hgvsp: ENSP00000426907.1:p.Gly5Glu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.63G>A
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.14G>A
  hgvsp: ENSP00000423402.1:p.Gly5Glu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.14G>A
  hgvsp: ENSP00000423509.1:p.Gly5Glu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.14G>A
  hgvsp: ENSP00000427637.1:p.Gly5Glu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.14G>A
  hgvsp: ENSP00000332646.4:p.Gly5Glu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.14G>A
  hgvsp: ENSP00000347619.4:p.Gly5Glu
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4661
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23844
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22255
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23356
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1402
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly5Glu
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

4-2935638-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935638
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935638
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 23538
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.13G>A
  hgvsp: ENSP00000425757.1:p.Gly5Arg
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.13G>A
  hgvsp: ENSP00000426907.1:p.Gly5Arg
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.13G>A
  hgvsp: ENSP00000347619.4:p.Gly5Arg
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.13G>A
  hgvsp: ENSP00000423509.1:p.Gly5Arg
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.13G>A
  hgvsp: ENSP00000332646.4:p.Gly5Arg
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.13G>A
  hgvsp: ENSP00000423402.1:p.Gly5Arg
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.62G>A
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.13G>A
  hgvsp: ENSP00000427637.1:p.Gly5Arg
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23907
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23504
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly5Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ

4-2935644-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935644
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935644
    reference: chr 4
allele count: 2
allele frequency: 8.826125330979699e-5
allele num: 22660
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.7T>A
  hgvsp: ENSP00000423402.1:p.Trp3Arg
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.7T>A
  hgvsp: ENSP00000425757.1:p.Trp3Arg
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.56T>A
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.7T>A
  hgvsp: ENSP00000427637.1:p.Trp3Arg
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.7T>A
  hgvsp: ENSP00000332646.4:p.Trp3Arg
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.7T>A
  hgvsp: ENSP00000426907.1:p.Trp3Arg
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.7T>A
  hgvsp: ENSP00000347619.4:p.Trp3Arg
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.7T>A
  hgvsp: ENSP00000423509.1:p.Trp3Arg
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25373
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21169
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2274
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5039
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Trp3Arg
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

4-2935646-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935646
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935646
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 22346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.54G>A
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.5G>A
  hgvsp: ENSP00000425757.1:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.5G>A
  hgvsp: ENSP00000426907.1:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.5G>A
  hgvsp: ENSP00000423402.1:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.5G>A
  hgvsp: ENSP00000347619.4:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.5G>A
  hgvsp: ENSP00000332646.4:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.5G>A
  hgvsp: ENSP00000427637.1:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.5G>A
  hgvsp: ENSP00000423509.1:p.Gly2Glu
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26032
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20562
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2109
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly2Glu
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

4-2935648-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935648
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935648
    reference: chr 4
allele count: 1
allele frequency: 4.545041359876375e-5
allele num: 22002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.52G>A
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.3G>A
  hgvsp: ENSP00000426907.1:p.Met1?
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.3G>A
  hgvsp: ENSP00000423402.1:p.Met1?
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.3G>A
  hgvsp: ENSP00000347619.4:p.Met1?
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.3G>A
  hgvsp: ENSP00000332646.4:p.Met1?
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.3G>A
  hgvsp: ENSP00000427637.1:p.Met1?
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.3G>A
  hgvsp: ENSP00000423509.1:p.Met1?
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.3G>A
  hgvsp: ENSP00000425757.1:p.Met1?
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20017
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26597
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

4-2935662-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935662
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935662
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 18502
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.-12G>C
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.-12G>C
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.-12G>C
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.-12G>C
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.-12G>C
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.38G>C
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000426907
  ensembl transcript: ENST00000514800
  gene symbol: MFSD10
  hgvsc: ENST00000514800.1:c.-12G>C
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.-12G>C
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14637
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31824
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1867
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11703
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2361
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

4-2935701-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2935701
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2935701
    reference: chr 4
allele count: 2
allele frequency: 1.659200265472043e-4
allele num: 12054
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109736
  ensembl transcript: ENST00000509676
  gene symbol: MFSD10
  hgvsc: ENST00000509676.1:n.29-30C>T
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423402
  ensembl transcript: ENST00000507555
  gene symbol: MFSD10
  hgvsc: ENST00000507555.1:c.-21-30C>T
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000347619
  ensembl transcript: ENST00000355443
  gene symbol: MFSD10
  hgvsc: ENST00000355443.4:c.-21-30C>T
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000423509
  ensembl transcript: ENST00000503596
  gene symbol: MFSD10
  hgvsc: ENST00000503596.1:c.-21-30C>T
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000425757
  ensembl transcript: ENST00000508221
  gene symbol: MFSD10
  hgvsc: ENST00000508221.1:c.-21-30C>T
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000427637
  ensembl transcript: ENST00000507272
  gene symbol: MFSD10
  hgvsc: ENST00000507272.1:c.-51C>T
  variant of: http://identifiers.org/hgnc/16894
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000109736
  ensembl protein: ENSP00000332646
  ensembl transcript: ENST00000329687
  gene symbol: MFSD10
  hgvsc: ENST00000329687.4:c.-51C>T
  variant of: http://identifiers.org/hgnc/16894
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34937
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3698
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2478
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2494
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9612
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-2939894-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2939894
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2939894
    reference: chr 4
allele count: 1
allele frequency: 7.616146230007616e-5
allele num: 13130
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+323C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+25C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+323C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*41G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+25C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*664G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+323C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.*46G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.*104G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.469G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+323C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+25C>T
  variant of: http://identifiers.org/hgnc/20205
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum

4-2939903-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2939903
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2939903
    reference: chr 4
allele count: 9
allele frequency: 6.795530051344004e-4
allele num: 13244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+332C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+332C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+34C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.460G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*655G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.*37G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+34C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+332C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*32G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.*95G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+34C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+332C>T
  variant of: http://identifiers.org/hgnc/20205
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS

4-2939904-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2939904
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2939904
    reference: chr 4
allele count: 23
allele frequency: 1.729063298752067e-3
allele num: 13302
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+333G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.*36C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+333G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.*94C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+35G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.459C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+333G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*654C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+35G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+35G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+333G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*31C>T
  variant of: http://identifiers.org/hgnc/16821
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3305
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

4-2939907-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2939907
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2939906
    reference: chr 4
allele count: 3
allele frequency: 2.270319358256395e-4
allele num: 13214
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*650delC
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.455delC
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+342delG
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.*90delC
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.*32delC
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*27delC
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+44delG
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+342delG
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+342delG
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+44delG
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+44delG
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+342delG
  variant of: http://identifiers.org/hgnc/20205
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: TG
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

4-2939908-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2939908
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2939908
    reference: chr 4
allele count: 2
allele frequency: 1.513775355737209e-4
allele num: 13212
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+337G>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+39G>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+39G>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+39G>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*650C>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+337G>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.455C>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+337G>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.*32C>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.*90C>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+337G>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*27C>G
  variant of: http://identifiers.org/hgnc/16821
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

4-2939908-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2939908
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2939908
    reference: chr 4
allele count: 1
allele frequency: 7.568876778686043e-5
allele num: 13212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.455C>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+337G>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+337G>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.*32C>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+39G>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.*90C>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+39G>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+39G>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+337G>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*650C>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+337G>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*27C>A
  variant of: http://identifiers.org/hgnc/16821
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD

4-2939910-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2939910
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2939910
    reference: chr 4
allele count: 4
allele frequency: 3.012501882813677e-4
allele num: 13278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+339G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+41G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+339G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*648C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.*88C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+41G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+41G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+339G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.*30C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*25C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+339G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.453C>T
  variant of: http://identifiers.org/hgnc/16821
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

4-2939952-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2939952
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2939952
    reference: chr 4
allele count: 3
allele frequency: 2.405773857257418e-4
allele num: 12470
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+381T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+381T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+83T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+381T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+83T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.*46A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2409A>G
  hgvsp: ENST00000398071.4:c.2409A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+83T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.411A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*606A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-37A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+381T>C
  variant of: http://identifiers.org/hgnc/20205
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3075
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val803Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

4-2939957-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2939957
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2939956
    reference: chr 4
allele count: 2
allele frequency: 1.64257555847569e-4
allele num: 12176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+96delA
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+394delA
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.405delT
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+394delA
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2403delT
  hgvsp: ENSP00000381146.4:p.Phe801LeufsTer3
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*600delT
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-43delT
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+96delA
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+394delA
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.*40delT
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+394delA
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+96delA
  variant of: http://identifiers.org/hgnc/20205
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe801LeufsTer3
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: TA
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

4-2939963-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2939963
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2939963
    reference: chr 4
allele count: 3
allele frequency: 2.464268112370626e-4
allele num: 12174
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.400T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+392A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+392A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+392A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+392A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-48T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+94A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+94A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2398T>C
  hgvsp: ENSP00000381146.4:p.Phe800Leu
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*595T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.*35T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+94A>G
  variant of: http://identifiers.org/hgnc/20205
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe800Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

4-2940013-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940013
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940013
    reference: chr 4
allele count: 1
allele frequency: 9.314456035767511e-5
allele num: 10736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+442C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*545G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+442C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+442C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2348G>A
  hgvsp: ENSP00000381146.4:p.Trp783Ter
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.350G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-98G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+144C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2352G>A
  hgvsp: ENST00000502735.1:c.2352G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+144C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+144C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+442C>T
  variant of: http://identifiers.org/hgnc/20205
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp783Ter
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

4-2940019-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940019
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940019
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 10656
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*539T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-104T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2346T>C
  hgvsp: ENST00000502735.1:c.2346T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+150A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+150A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+448A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.344T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+448A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+150A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+448A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2342T>C
  hgvsp: ENSP00000381146.4:p.Leu781Pro
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+448A>G
  variant of: http://identifiers.org/hgnc/20205
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu781Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ

4-2940021-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940021
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940021
    reference: chr 4
allele count: 2
allele frequency: 1.883239171374765e-4
allele num: 10620
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2344C>T
  hgvsp: ENSP00000427415.1:p.Pro782Ser
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+152G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2340C>T
  hgvsp: ENST00000398071.4:c.2340C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+152G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.342C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*537C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+450G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+152G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+450G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+450G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+450G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-106C>T
  variant of: http://identifiers.org/hgnc/16821
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro782Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

4-2940027-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940027
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940027
    reference: chr 4
allele count: 15
allele frequency: 1.426126640045636e-3
allele num: 10518
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2334A>G
  hgvsp: ENST00000398071.4:c.2334A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+158T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+456T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+158T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+456T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+158T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*531A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+456T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2338A>G
  hgvsp: ENSP00000427415.1:p.Asn780Asp
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.336A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-112A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+456T>C
  variant of: http://identifiers.org/hgnc/20205
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Asn780Asp
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP

4-2940037-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940037
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940037
    reference: chr 4
allele count: 2
allele frequency: 1.964250638381458e-4
allele num: 10182
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*521G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+466C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+466C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+168C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+168C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+466C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+168C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2328G>A
  hgvsp: ENST00000502735.1:c.2328G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2324G>A
  hgvsp: ENSP00000381146.4:p.Arg775Gln
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.326G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+466C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-122G>A
  variant of: http://identifiers.org/hgnc/16821
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg775Gln
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

4-2940042-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940042
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940042
    reference: chr 4
allele count: 1
allele frequency: 1.008064516129032e-4
allele num: 9920
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2323T>C
  hgvsp: ENSP00000427415.1:p.Phe775Leu
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+173A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+471A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+173A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2319T>C
  hgvsp: ENST00000398071.4:c.2319T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-127T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+471A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.321T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+173A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*516T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+471A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+471A>G
  variant of: http://identifiers.org/hgnc/20205
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe775Leu
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

4-2940045-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940045
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940045
    reference: chr 4
allele count: 20
allele frequency: 2.043318348998774e-3
allele num: 9788
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+176C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2320G>A
  hgvsp: ENSP00000427415.1:p.Glu774Lys
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2316G>A
  hgvsp: ENST00000398071.4:c.2316G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+176C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+474C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*513G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+474C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+176C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.318G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+474C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+474C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-130G>A
  variant of: http://identifiers.org/hgnc/16821
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2481
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu774Lys
num of homozygotes: 1
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ

4-2940048-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940048
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940048
    reference: chr 4
allele count: 1
allele frequency: 1.042970379641218e-4
allele num: 9588
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+477G>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+477G>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.315C>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+179G>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+179G>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-133C>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2313C>G
  hgvsp: ENST00000398071.4:c.2313C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*510C>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+477G>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2317C>G
  hgvsp: ENSP00000427415.1:p.Leu773Val
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+179G>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+477G>C
  variant of: http://identifiers.org/hgnc/20205
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu773Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

4-2940053-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940053
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940053
    reference: chr 4
allele count: 16
allele frequency: 1.683147485798443e-3
allele num: 9506
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+184G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+482G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+482G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+184G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.310C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+482G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2312C>T
  hgvsp: ENSP00000427415.1:p.Ala771Val
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+184G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-138C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+482G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2308C>T
  hgvsp: ENST00000398071.4:c.2308C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*505C>T
  variant of: http://identifiers.org/hgnc/16821
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Ala771Val
num of homozygotes: 1
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD

4-2940062-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940062
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940062
    reference: chr 4
allele count: 1
allele frequency: 1.094091903719913e-4
allele num: 9140
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+491A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+193A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.309-8T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+491A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2311-8T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2307-8T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+193A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+491A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-147T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+491A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*496T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+193A>G
  variant of: http://identifiers.org/hgnc/20205
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2307-8T>C
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

4-2940062-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940062
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940062
    reference: chr 4
allele count: 25
allele frequency: 2.735229759299781e-3
allele num: 9140
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+491A>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+193A>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+491A>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*496T>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+193A>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+491A>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+491A>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2311-8T>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+193A>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2307-8T>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-147T>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.309-8T>A
  variant of: http://identifiers.org/hgnc/16821
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 2.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2307-8T>A
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

4-2940065-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940065
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940065
    reference: chr 4
allele count: 1
allele frequency: 1.104972375690608e-4
allele num: 9050
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+494T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+494T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2307-11A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2311-11A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*493A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+196T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.309-11A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+494T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+196T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+494T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-150A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+196T>C
  variant of: http://identifiers.org/hgnc/20205
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

4-2940076-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940076
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940076
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 8478
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+505C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+207C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-161G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+207C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*482G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+207C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2311-22G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.309-22G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+505C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+505C>T
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2307-22G>A
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+505C>T
  variant of: http://identifiers.org/hgnc/20205
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP

4-2940077-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940077
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940077
    reference: chr 4
allele count: 1
allele frequency: 1.194743130227001e-4
allele num: 8370
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*481C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+208G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+208G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+208G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2307-23C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+506G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-162C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+506G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.309-23C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+506G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2311-23C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+506G>A
  variant of: http://identifiers.org/hgnc/20205
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

4-2940091-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940091
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940092
    reference: chr 4
allele count: 1
allele frequency: 1.314405888538381e-4
allele num: 7608
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-177dupT
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+223dupA
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2307-38dupT
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.309-38dupT
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+521dupA
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+223dupA
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+521dupA
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+521dupA
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+223dupA
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*466dupT
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+521dupA
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2311-38dupT
  variant of: http://identifiers.org/hgnc/16821
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/4-2940093-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940093
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940093
    reference: chr 4
allele count: 1
allele frequency: 1.419647927314026e-4
allele num: 7044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-178G>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+224C>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+522C>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+522C>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2311-39G>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*465G>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+522C>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+224C>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+224C>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.309-39G>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+522C>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2307-39G>T
  variant of: http://identifiers.org/hgnc/16821
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

4-2940097-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940097
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940097
    reference: chr 4
allele count: 1
allele frequency: 1.439677512237259e-4
allele num: 6946
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-182T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+228A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2311-43T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.309-43T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2307-43T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+526A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+228A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+526A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+228A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*461T>C
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+526A>G
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+526A>G
  variant of: http://identifiers.org/hgnc/20205
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-2940103-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940103
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940103
    reference: chr 4
allele count: 1
allele frequency: 1.872659176029963e-4
allele num: 5340
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.309-49A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-188A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+234T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+532T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+234T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2307-49A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*455A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2311-49A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+532T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+532T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+234T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+532T>C
  variant of: http://identifiers.org/hgnc/20205
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

4-2940104-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940104
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940104
    reference: chr 4
allele count: 1
allele frequency: 1.817520901490367e-4
allele num: 5502
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*20-189C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+533G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2307-50C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1057+235G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+533G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2311-50C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+533G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+533G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*454C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1098+235G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.309-50C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2597+235G>A
  variant of: http://identifiers.org/hgnc/20205
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum

4-2940507-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940507
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940507
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 109180
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.309-453A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2685T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+936T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+936T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2311-453A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*19+32A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1186T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+936T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*51A>G
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1145T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+936T>C
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2307-453A>G
  variant of: http://identifiers.org/hgnc/16821
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5086
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12725
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15072
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10888
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

4-2940519-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2940519
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2940519
    reference: chr 4
allele count: 1
allele frequency: 9.107302234931968e-6
allele num: 109802
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000505731
  gene symbol: NOP14-AS1
  hgvsc: ENST00000505731.1:n.1198G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000503709
  gene symbol: NOP14-AS1
  hgvsc: ENST00000503709.1:n.579+948G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000427415
  ensembl transcript: ENST00000502735
  gene symbol: NOP14
  hgvsc: ENST00000502735.1:c.2311-465C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512712
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512712.2:n.1438+948G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000315674
  ensembl transcript: ENST00000314262
  gene symbol: NOP14
  hgvsc: ENST00000314262.6:c.*19+20C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl transcript: ENST00000507120
  gene symbol: NOP14
  hgvsc: ENST00000507120.1:n.309-465C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000381146
  ensembl transcript: ENST00000398071
  gene symbol: NOP14
  hgvsc: ENST00000398071.4:c.2307-465C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000512802
  gene symbol: NOP14-AS1
  hgvsc: ENST00000512802.1:n.194+948G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000087269
  ensembl protein: ENSP00000405068
  ensembl transcript: ENST00000416614
  gene symbol: NOP14
  hgvsc: ENST00000416614.2:c.*39C>T
  variant of: http://identifiers.org/hgnc/16821
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507702
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507702.1:n.250+948G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000507999
  gene symbol: NOP14-AS1
  hgvsc: ENST00000507999.1:n.1157G>A
  variant of: http://identifiers.org/hgnc/20205
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000249673
  ensembl transcript: ENST00000515194
  gene symbol: NOP14-AS1
  hgvsc: ENST00000515194.1:n.2697G>A
  variant of: http://identifiers.org/hgnc/20205
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4913
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7357
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7576
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18529
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.2697G>A
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
reference allele: G

GenotypeQuality
all individuals: 539
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31125
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2342
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2757
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 3
allele frequency: 1.052631578947368e-3
allele num: 2850
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4928
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10930
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.186e0

VQSLOD
type: SiteQuality
SIO_000300: 3.66e0

QD
type: SiteQuality
SIO_000300: 1.311e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.64e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.25e-1

DP
type: SiteQuality
SIO_000300: 7.13088e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
all individuals: 7317
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2709
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2013
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2443
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2273
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7832
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1420
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2720
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.738225629791895e-4
allele num: 3652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.69e-2

QD
type: SiteQuality
SIO_000300: 1.459e1

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.98e-1

DP
type: SiteQuality
SIO_000300: 7.06065e5

BaseQRankSum
type: SiteQuality
SIO_000300: 3.69e-1

GenotypeQuality
all individuals: 2869
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30406
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2057
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7612
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2213
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.782434374763598e-5
allele num: 26438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 370
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.738e0

VQSLOD
type: SiteQuality
SIO_000300: -3.466e-1

QD
type: SiteQuality
SIO_000300: 1.81e1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 4.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

DP
type: SiteQuality
SIO_000300: 6.99463e5

GenotypeQuality
all individuals: 2057
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7612
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2213
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1410
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 292
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.512973749905439e-4
allele num: 26438
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.466e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.738e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 4.03e-1

DP
type: SiteQuality
SIO_000300: 6.99463e5

QD
type: SiteQuality
SIO_000300: 1.81e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

GenotypeQuality
all individuals: 2028
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2618
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1406
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2534
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 57
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.51894888736994e-4
allele num: 26334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4748
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

DP
type: SiteQuality
SIO_000300: 6.99639e5

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.747e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.1e-2

QD
type: SiteQuality
SIO_000300: 1.771e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.79e-2

GenotypeQuality
all individuals: 2143
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2623
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2028
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7716
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1408
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26126
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1108
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 5.681818181818182e-4
allele num: 3520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 358
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.325e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.76e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.227e0

VQSLOD
type: SiteQuality
SIO_000300: 6.929999999999999e-1

DP
type: SiteQuality
SIO_000300: 6.97129e5

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.207e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

GenotypeQuality
all individuals: 274
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 671
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7557
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2756
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7584
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2118
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 57
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 128
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 1

South Asian
type: Population
allele count: 28
allele frequency: 2.65352539802881e-3
allele num: 10552
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25864
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 1.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

DP
type: SiteQuality
SIO_000300: 6.96538e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.61e0

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.78e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.259e1

GenotypeQuality
all individuals: 193
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30468
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3307
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2361
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1863
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1998
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7430
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3300
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.118616144975288e-5
allele num: 24280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 974
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.95e-1

QD
type: SiteQuality
SIO_000300: 2.85e0

MQRankSum
type: SiteQuality
SIO_000300: -1.626e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.87e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.83353e5

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7992
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31901
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 126
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2451
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 656
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7728
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 966
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23634
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 1.310043668122271e-3
allele num: 2290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10078
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3194
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.91e-2

FS
type: SiteQuality
SIO_000300: 6.176e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e-1

DP
type: SiteQuality
SIO_000300: 6.81486e5

QD
type: SiteQuality
SIO_000300: 9.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
all individuals: 7630
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2118
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2643
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8183
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1388
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10014
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 928
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3120
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

DP
type: SiteQuality
SIO_000300: 6.76834e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.054e0

QD
type: SiteQuality
SIO_000300: 1.233e1

FS
type: SiteQuality
SIO_000300: 2.808e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.88e-2

MQ
type: SiteQuality
SIO_000300: 5.79e1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeQuality
all individuals: 1369
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1998
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 567
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1450
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8256
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GenotypeQuality
all individuals: 32850
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7798
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GenotypeQuality
all individuals: 161
bin: 4.75e1
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GenotypeQuality
all individuals: 124
bin: 8.25e1
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GenotypeQuality
all individuals: 276
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.32667997338656e-4
allele num: 3006
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9928
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2224
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.69e-2

QD
type: SiteQuality
SIO_000300: 7.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.98e-1

FS
type: SiteQuality
SIO_000300: 3.296e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

VQSLOD
type: SiteQuality
SIO_000300: -7.669e-1

DP
type: SiteQuality
SIO_000300: 6.7632e5

BaseQRankSum
type: SiteQuality
SIO_000300: 9.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.3e-1

GenotypeQuality
all individuals: 124
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1450
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32850
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1369
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 276
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7798
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9928
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3006
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.395604395604395e-5
allele num: 22750
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.915e1

DP
type: SiteQuality
SIO_000300: 6.7632e5

FS
type: SiteQuality
SIO_000300: 3.296e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.78e-1

QD
type: SiteQuality
SIO_000300: 7.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.669e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.69e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.98e-1

GenotypeQuality
all individuals: 1344
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1493
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2679
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7106
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
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GenotypeQuality
all individuals: 31849
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1897
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 545
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 3.311258278145695e-3
allele num: 302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 9.267840593141798e-5
allele num: 21580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9772
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.486e0

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.07e-2

DP
type: SiteQuality
SIO_000300: 6.56238e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 1.309e1

GenotypeQuality
all individuals: 125
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1866
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1615
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1338
bin: 6.75e1
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GenotypeQuality
all individuals: 7176
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1449
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.667662434652726e-5
allele num: 21424
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.496503496503497e-4
allele num: 2860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4046
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.007e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.11e-2

DP
type: SiteQuality
SIO_000300: 6.56791e5

VQSLOD
type: SiteQuality
SIO_000300: -8.206e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.1e-1

GenotypeQuality
all individuals: 265
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 139
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1967
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
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variant carriers: 0

GenotypeQuality
all individuals: 10990
bin: 7.5e0
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GenotypeQuality
all individuals: 1684
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29417
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3705
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.16722972972973e-4
allele num: 9472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2028
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 6.30205e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.11e-2

QD
type: SiteQuality
SIO_000300: 1.03e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 5.659999999999999e-1

GenotypeQuality
all individuals: 72
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10990
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1684
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6283
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1363
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9472
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 4.930966469428008e-4
allele num: 2028
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.685284640171858e-4
allele num: 3724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2616
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.659999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.30205e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.1e-1

QD
type: SiteQuality
SIO_000300: 1.03e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.11e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

GenotypeQuality
all individuals: 1687
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1310
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3748
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.53154992852767e-4
allele num: 19588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2048
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.446e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.709e0

DP
type: SiteQuality
SIO_000300: 6.29198e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.044e1

GenotypeQuality
all individuals: 153
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 481
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.285412262156448e-5
allele num: 18920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9372
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.12e0

FS
type: SiteQuality
SIO_000300: 2.443e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.55e-2

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.187e0

DP
type: SiteQuality
SIO_000300: 6.23421e5

GenotypeQuality
all individuals: 931
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 166
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6148
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variant carriers: 0

GenotypeQuality
all individuals: 72
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GenotypeQuality
all individuals: 262
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GenotypeQuality
all individuals: 3648
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 327
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.090037061260083e-4
allele num: 18348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1960
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.61e0

VQSLOD
type: SiteQuality
SIO_000300: -1.275e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

FS
type: SiteQuality
SIO_000300: 8.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

DP
type: SiteQuality
SIO_000300: 6.1475e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.27e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2035
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3648
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
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variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 123
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variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11966
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6148
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1960
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.07342206955775e-4
allele num: 9316
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

FS
type: SiteQuality
SIO_000300: 8.59e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.275e0

MQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.27e-2

DP
type: SiteQuality
SIO_000300: 6.1475e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

QD
type: SiteQuality
SIO_000300: 6.61e0

GenotypeQuality
all individuals: 819
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29836
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1958
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1293
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 121
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6315
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 2.842524161455372e-4
allele num: 3518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1978
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2430
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 8.887e0

DP
type: SiteQuality
SIO_000300: 6.1482e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.25e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.497e-1

QD
type: SiteQuality
SIO_000300: 1.042e1

GenotypeQuality
all individuals: 1520
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12037
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 260
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6315
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1293
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2804
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 2.842524161455372e-4
allele num: 3518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1978
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.955e1

VQSLOD
type: SiteQuality
SIO_000300: -4.497e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.25e-2

FS
type: SiteQuality
SIO_000300: 8.887e0

MQRankSum
type: SiteQuality
SIO_000300: 7.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.45e-1

QD
type: SiteQuality
SIO_000300: 1.042e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

DP
type: SiteQuality
SIO_000300: 6.1482e5

GenotypeQuality
all individuals: 150
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 7.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.75e1
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GenotypeQuality
all individuals: 12331
bin: 7.5e0
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GenotypeQuality
all individuals: 72
bin: 9.25e1
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GenotypeQuality
all individuals: 323
bin: 7.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
all individuals: 260
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 425
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6147
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.871912693854107e-4
allele num: 3482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1956
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.10196e5

FS
type: SiteQuality
SIO_000300: 2.834e0

VQSLOD
type: SiteQuality
SIO_000300: -7.892e-1

MQ
type: SiteQuality
SIO_000300: 5.494e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.21e0

QD
type: SiteQuality
SIO_000300: 1.079e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.63e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.39e-1

GenotypeQuality
all individuals: 14214
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28316
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1391
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1048
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1998
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 72
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9100
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2218
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.90249085113918e-5
allele num: 16942
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e0

VQSLOD
type: SiteQuality
SIO_000300: -1.099e0

QD
type: SiteQuality
SIO_000300: 6.56e0

DP
type: SiteQuality
SIO_000300: 5.89463e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.497e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.87e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
all individuals: 109
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
all individuals: 251
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variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1850
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9074
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.092145949288807e-4
allele num: 3234
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.457e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-2

QD
type: SiteQuality
SIO_000300: 9.199999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e0

DP
type: SiteQuality
SIO_000300: 5.87097e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

VQSLOD
type: SiteQuality
SIO_000300: -1.458e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.015e0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 16

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 7.75e1
variant carriers: 1

East Asian
type: Population
allele count: 3
allele frequency: 1.559251559251559e-3
allele num: 1924
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2998
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.747252747252747e-3
allele num: 364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 8.361204013377926e-4
allele num: 15548
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.67497e5

FS
type: SiteQuality
SIO_000300: 5.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.091e1

GenotypeQuality
all individuals: 54
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1155
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 259
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GenotypeQuality
all individuals: 318
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.651589729945457e-5
allele num: 15034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2914
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8756
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

DP
type: SiteQuality
SIO_000300: 5.60064e5

VQSLOD
type: SiteQuality
SIO_000300: -1.49e0

QD
type: SiteQuality
SIO_000300: 2.909e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.51e-1

GenotypeQuality
all individuals: 383
bin: 7.25e1
variant carriers: 98

GenotypeQuality
all individuals: 2248
bin: 2.5e0
variant carriers: 16

GenotypeQuality
all individuals: 15717
bin: 7.5e0
variant carriers: 83

GenotypeQuality
all individuals: 108
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variant carriers: 48

GenotypeQuality
all individuals: 5526
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variant carriers: 126

GenotypeQuality
all individuals: 1757
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variant carriers: 102

GenotypeQuality
all individuals: 679
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variant carriers: 92

GenotypeQuality
all individuals: 169
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variant carriers: 113

GenotypeQuality
all individuals: 207
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variant carriers: 173

GenotypeQuality
all individuals: 1295
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variant carriers: 116

GenotypeQuality
all individuals: 22711
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variant carriers: 154

GenotypeQuality
all individuals: 1013
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variant carriers: 94

GenotypeQuality
all individuals: 210
bin: 8.25e1
variant carriers: 132

GenotypeQuality
all individuals: 195
bin: 5.25e1
variant carriers: 132

East Asian
type: Population
allele count: 1
allele frequency: 5.488474204171241e-4
allele num: 1822
num of homozygotes: 0

South Asian
type: Population
allele count: 270
allele frequency: 3.066787823716493e-2
allele num: 8804
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 1470
allele frequency: 9.424285164764713e-2
allele num: 15598
num of homozygotes: 42

European (Finnish)
type: Population
allele count: 38
allele frequency: 1.049723756906077e-1
allele num: 362
num of homozygotes: 1

Latino
type: Population
allele count: 693
allele frequency: 3.196494464944649e-1
allele num: 2168
num of homozygotes: 63

African
type: Population
allele count: 46
allele frequency: 1.568894952251023e-2
allele num: 2932
num of homozygotes: 0

Other
type: Population
allele count: 19
allele frequency: 7.78688524590164e-2
allele num: 244
num of homozygotes: 1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

QD
type: SiteQuality
SIO_000300: 1.404e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.770000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.68e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.77896e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeQuality
all individuals: 3115
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1295
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2248
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2351
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variant carriers: 1

GenotypeQuality
all individuals: 173
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GenotypeQuality
all individuals: 22711
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15717
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GenotypeQuality
all individuals: 5526
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variant carriers: 0

GenotypeQuality
all individuals: 207
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GenotypeQuality
all individuals: 383
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GenotypeQuality
all individuals: 199
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GenotypeQuality
all individuals: 334
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variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2168
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.135847342117219e-4
allele num: 8804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 244
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2932
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.404e1

DP
type: SiteQuality
SIO_000300: 5.77896e5

VQSLOD
type: SiteQuality
SIO_000300: 5.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.770000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 17452
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1048
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GenotypeQuality
all individuals: 148
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GenotypeQuality
all individuals: 671
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GenotypeQuality
all individuals: 218
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GenotypeQuality
all individuals: 87
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GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1546
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.567928730512249e-4
allele num: 1796
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2892
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.17e-1

DP
type: SiteQuality
SIO_000300: 5.4923e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.013e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.51e-2

FS
type: SiteQuality
SIO_000300: 1.2175e1

VQSLOD
type: SiteQuality
SIO_000300: -1.702e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22577
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 38
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GenotypeQuality
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GenotypeQuality
all individuals: 1147
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GenotypeQuality
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GenotypeQuality
all individuals: 750
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GenotypeQuality
all individuals: 47
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GenotypeQuality
all individuals: 36
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GenotypeQuality
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GenotypeQuality
all individuals: 81
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GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1012
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.89521437466643e-5
allele num: 11242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8332
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 4.94685e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 2.943e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.434e0

VQSLOD
type: SiteQuality
SIO_000300: -2.582e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.49e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.27e-1

GenotypeQuality
all individuals: 145
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5048
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 80
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GenotypeQuality
all individuals: 69
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GenotypeQuality
all individuals: 3727
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GenotypeQuality
all individuals: 132
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GenotypeQuality
all individuals: 263
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GenotypeQuality
all individuals: 39
bin: 9.25e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.188183807439825e-3
allele num: 914
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.89465706707086e-4
allele num: 10556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8242
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.78e-2

DP
type: SiteQuality
SIO_000300: 4.83332e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

QD
type: SiteQuality
SIO_000300: 1.256e1

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 19939
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
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GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 1310
bin: 2.5e0
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GenotypeQuality
all individuals: 143
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10542
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8244
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2214
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.799e0

DP
type: SiteQuality
SIO_000300: 4.83021e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.69e-2

QD
type: SiteQuality
SIO_000300: 6.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 2124
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.808318264014466e-3
allele num: 1106
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQRankSum
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SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.469e0

DP
type: SiteQuality
SIO_000300: 4.69726e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.89e-2

QD
type: SiteQuality
SIO_000300: 1.25e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8144
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -5.03e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

BaseQRankSum
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SIO_000300: -1.754e0

QD
type: SiteQuality
SIO_000300: 8.41e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2040
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.034340091021928e-4
allele num: 9668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1014
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.15e-1

DP
type: SiteQuality
SIO_000300: 4.58274e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 1.278e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.17e-2

FS
type: SiteQuality
SIO_000300: 8.409000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: -9.647e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7698
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 7628
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1546
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 3.92437e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.33e-2

FS
type: SiteQuality
SIO_000300: 2.522e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.168e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4126
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 3.116235587410408e-4
allele num: 6418
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

Other
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

QD
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InbreedingCoeff
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FS
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BaseQRankSum
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DP
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VQSLOD
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MQ
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SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: 4.23e-1

ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1488
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.415227851684121e-4
allele num: 7066
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3534
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InbreedingCoeff
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SIO_000300: -3.5e-2

MQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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FS
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DP
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SIO_000300: 1.51792e5

MQ
type: SiteQuality
SIO_000300: 5.728e1

BaseQRankSum
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SIO_000300: 2.48e0

GenotypeDepth
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.19047619047619e-2
allele num: 168
num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 1.219512195121951e-2
allele num: 492
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 6.747638326585695e-4
allele num: 1482
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3542
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.272e1

ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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DP
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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MQ
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FS
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 1
allele frequency: 2.008032128514056e-3
allele num: 498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 6.775067750677507e-4
allele num: 1476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 3.937007874015748e-3
allele num: 3556
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

South Asian
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allele count: 7
allele frequency: 9.684560044272275e-4
allele num: 7228
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.49e-2

DP
type: SiteQuality
SIO_000300: 1.6157e5

MQ
type: SiteQuality
SIO_000300: 5.908e1

FS
type: SiteQuality
SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

QD
type: SiteQuality
SIO_000300: 1.434e1

GenotypeDepth
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variant carriers: 1

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 3
allele frequency: 4.152823920265781e-4
allele num: 7224
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3518
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.71e-2

BaseQRankSum
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SIO_000300: 2.06e0

FS
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SIO_000300: 0.0e0

MQ
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SIO_000300: 5.715e1

MQRankSum
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SIO_000300: -7.75e-1

VQSLOD
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SIO_000300: 4.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-2

DP
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SIO_000300: 1.6238e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.76e-1

QD
type: SiteQuality
SIO_000300: 1.601e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 124
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 6.024096385542169e-3
allele num: 166
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.836074872376631e-4
allele num: 3526
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1452
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 192
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7216
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.571e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e-1

QD
type: SiteQuality
SIO_000300: 1.098e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.89e-1

MQ
type: SiteQuality
SIO_000300: 5.833e1

MQRankSum
type: SiteQuality
SIO_000300: -1.55e-1

FS
type: SiteQuality
SIO_000300: 4.923e0

DP
type: SiteQuality
SIO_000300: 1.62902e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.09e-2

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 1039
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 402
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GenotypeQuality
all individuals: 88
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GenotypeQuality
all individuals: 124
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 44
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.385809312638581e-4
allele num: 7216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

FS
type: SiteQuality
SIO_000300: 4.923e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.09e-2

MQ
type: SiteQuality
SIO_000300: 5.833e1

VQSLOD
type: SiteQuality
SIO_000300: -1.571e0

DP
type: SiteQuality
SIO_000300: 1.62902e5

QD
type: SiteQuality
SIO_000300: 1.098e1

GenotypeDepth
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 139
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GenotypeQuality
all individuals: 182
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GenotypeQuality
all individuals: 4644
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 70
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 7
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variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 5.505092210294523e-4
allele num: 7266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.87e-2

MQ
type: SiteQuality
SIO_000300: 5.71e1

QD
type: SiteQuality
SIO_000300: 1.1e1

MQRankSum
type: SiteQuality
SIO_000300: 3.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

FS
type: SiteQuality
SIO_000300: 8.120000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.63627e5

VQSLOD
type: SiteQuality
SIO_000300: -1.026e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 98
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GenotypeQuality
all individuals: 10
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variant carriers: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1054
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 5.0e-3
allele num: 400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.363140676117775e-4
allele num: 7336
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

DP
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MQ
type: SiteQuality
SIO_000300: 5.746e1

ReadPosRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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FS
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MQRankSum
type: SiteQuality
SIO_000300: 9.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.49e-2

QD
type: SiteQuality
SIO_000300: 8.83e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.75027502750275e-4
allele num: 7272
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
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VQSLOD
type: SiteQuality
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DP
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FS
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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QD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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SIO_000300: 4.57e-1

MQ
type: SiteQuality
SIO_000300: 5.649e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 3
allele frequency: 4.081632653061225e-4
allele num: 7350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3100
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
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MQ
type: SiteQuality
SIO_000300: 5.732e1

ReadPosRankSum
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SIO_000300: -7.49e-1

QD
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VQSLOD
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SIO_000300: -1.559e0

ClippingRankSum
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SIO_000300: 8.44e-1

InbreedingCoeff
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SIO_000300: -2.55e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.82e-1

FS
type: SiteQuality
SIO_000300: 4.856e0

BaseQRankSum
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SIO_000300: 1.31e0

DP
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SIO_000300: 1.52479e5

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.720238095238095e-4
allele num: 2688
num of homozygotes: 0

African
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num of homozygotes: 0

Other
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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FS
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BaseQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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DP
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VQSLOD
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MQRankSum
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QD
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SIO_000300: 8.06e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 94
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2662
num of homozygotes: 0

African
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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QD
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SIO_000300: 1.557e1

FS
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InbreedingCoeff
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SIO_000300: -3.08e-2

VQSLOD
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SIO_000300: -1.714e0

DP
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SIO_000300: 1.39712e5

MQ
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SIO_000300: 4.401e1

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

East Asian
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allele frequency: 1.515151515151515e-2
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2652
num of homozygotes: 0

South Asian
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ReadPosRankSum
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SIO_000300: 1.04e0

BaseQRankSum
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ClippingRankSum
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FS
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DP
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MQRankSum
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VQSLOD
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MQ
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SIO_000300: 5.65e1

InbreedingCoeff
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SIO_000300: -3.06e-2

QD
type: SiteQuality
SIO_000300: 1.08e1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 3.799392097264438e-4
allele num: 2632
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 2.631578947368421e-2
allele num: 228
num of homozygotes: 0

South Asian
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allele frequency: 1.120134416129936e-3
allele num: 7142
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

BaseQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
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QD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 9.433962264150943e-3
allele num: 212
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 2576
num of homozygotes: 0

South Asian
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InbreedingCoeff
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QD
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FS
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VQSLOD
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MQ
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DP
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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num of homozygotes: 0

South Asian
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allele num: 6796
num of homozygotes: 0

Latino
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European (Non-Finnish)
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Other
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European (Finnish)
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FS
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BaseQRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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ClippingRankSum
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MQ
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 1.490757304710793e-3
allele num: 6708
num of homozygotes: 0

African
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allele count: 9
allele frequency: 4.285714285714286e-2
allele num: 210
num of homozygotes: 1

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Other
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European (Non-Finnish)
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allele frequency: 4.0290088638195e-4
allele num: 2482
num of homozygotes: 0

Latino
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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FS
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MQRankSum
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QD
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DP
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2418
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 2.777777777777778e-2
allele num: 36
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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InbreedingCoeff
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SIO_000300: -3.94e-2

FS
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MQRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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SIO_000300: -4.97e-1

MQ
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SIO_000300: 5.604e1

DP
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ReadPosRankSum
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SIO_000300: 4.06e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2396
num of homozygotes: 0

South Asian
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allele frequency: 2.444240757714635e-3
allele num: 6546
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Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: -2.89e-1

ReadPosRankSum
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BaseQRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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FS
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DP
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QD
type: SiteQuality
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2276
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
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South Asian
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African
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East Asian
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MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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BaseQRankSum
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SIO_000300: 6.46e-1

MQ
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SIO_000300: 5.79e1

QD
type: SiteQuality
SIO_000300: 1.22e1

DP
type: SiteQuality
SIO_000300: 1.01668e5

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 18
allele frequency: 9.278350515463918e-2
allele num: 194
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.08695652173913e-2
allele num: 92
num of homozygotes: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 2.636203866432337e-3
allele num: 2276
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 6330
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
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MQRankSum
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SIO_000300: 3.58e-1

BaseQRankSum
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SIO_000300: 6.46e-1

ClippingRankSum
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DP
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MQ
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QD
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InbreedingCoeff
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SIO_000300: 4.37e-2

FS
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SIO_000300: 0.0e0

ReadPosRankSum
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VQSLOD
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SIO_000300: 1.2e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2254
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 7.692307692307693e-3
allele num: 130
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele count: 0
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Other
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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MQ
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FS
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QD
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2088
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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African
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East Asian
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South Asian
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VQSLOD
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QD
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InbreedingCoeff
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FS
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MQ
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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African
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MQ
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VQSLOD
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ReadPosRankSum
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DP
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FS
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 1
allele frequency: 1.893222264293828e-4
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East Asian
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Latino
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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MQRankSum
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VQSLOD
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QD
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BaseQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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MQ
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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African
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East Asian
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Other
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European (Finnish)
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BaseQRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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FS
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MQ
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DP
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InbreedingCoeff
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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East Asian
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South Asian
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InbreedingCoeff
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MQRankSum
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DP
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BaseQRankSum
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MQ
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FS
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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allele frequency: 2.733734281027884e-4
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European (Finnish)
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African
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Latino
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Other
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European (Non-Finnish)
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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FS
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DP
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MQ
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Latino
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South Asian
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African
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Other
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European (Non-Finnish)
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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DP
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MQ
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ReadPosRankSum
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QD
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FS
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Latino
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East Asian
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DP
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QD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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ClippingRankSum
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MQRankSum
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FS
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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