3-134090152-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090152
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090152
    reference: chr 3
allele count: 1
allele frequency: 8.469265037180074e-6
allele num: 118074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.124G>A
  hgvsp: ENSP00000422658.1:p.Gly42Arg
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.124G>A
  hgvsp: ENSP00000427482.1:p.Gly42Arg
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.124G>A
  hgvsp: ENSP00000427184.1:p.Gly42Arg
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.124G>A
  hgvsp: ENSP00000424910.1:p.Gly42Arg
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.298G>A
  hgvsp: ENSP00000424765.1:p.Gly100Arg
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.401+3G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.124G>A
  hgvsp: ENSP00000409999.2:p.Gly42Arg
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.124G>A
  hgvsp: ENSP00000425475.1:p.Gly42Arg
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.124G>A
  hgvsp: ENSP00000427292.1:p.Gly42Arg
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.406G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.124G>A
  hgvsp: ENSP00000249883.5:p.Gly42Arg
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 35129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly42Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/3-134090156-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090156
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090156
    reference: chr 3
allele count: 5
allele frequency: 4.234704248255302e-5
allele num: 118072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.120G>T
  hgvsp: ENSP00000422658.1:p.Arg40Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.400G>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.402G>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.120G>T
  hgvsp: ENSP00000427482.1:p.Arg40Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.120G>T
  hgvsp: ENSP00000409999.2:p.Arg40Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.120G>T
  hgvsp: ENSP00000425475.1:p.Arg40Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.120G>T
  hgvsp: ENSP00000427184.1:p.Arg40Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.120G>T
  hgvsp: ENSP00000424910.1:p.Arg40Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.294G>T
  hgvsp: ENSP00000424765.1:p.Arg98Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.120G>T
  hgvsp: ENSP00000427292.1:p.Arg40Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.120G>T
  hgvsp: ENSP00000249883.5:p.Arg40Ser
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35141
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg40Ser
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-134090161-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090161
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090161
    reference: chr 3
allele count: 4
allele frequency: 3.386386725364037e-5
allele num: 118120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.115C>T
  hgvsp: ENST00000505596.1:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.115C>T
  hgvsp: ENST00000504234.1:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.115C>T
  hgvsp: ENST00000510560.1:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.289C>T
  hgvsp: ENST00000514516.1:c.289C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.115C>T
  hgvsp: ENST00000515172.1:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.115C>T
  hgvsp: ENST00000506107.1:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.115C>T
  hgvsp: ENST00000513145.1:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.397C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.115C>T
  hgvsp: ENST00000422605.2:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.395C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.115C>T
  hgvsp: ENST00000249883.5:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35223
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu39Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum

3-134090162-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090162
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090162
    reference: chr 3
allele count: 1
allele frequency: 8.466110161025414e-6
allele num: 118118
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.114C>G
  hgvsp: ENST00000505596.1:c.114C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.114C>G
  hgvsp: ENST00000515172.1:c.114C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.114C>G
  hgvsp: ENST00000513145.1:c.114C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.114C>G
  hgvsp: ENST00000506107.1:c.114C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.288C>G
  hgvsp: ENST00000514516.1:c.288C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.114C>G
  hgvsp: ENST00000249883.5:c.114C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.114C>G
  hgvsp: ENST00000422605.2:c.114C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.394C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.114C>G
  hgvsp: ENST00000510560.1:c.114C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.114C>G
  hgvsp: ENST00000504234.1:c.114C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.396C>G
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala38Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

3-134090187-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090187
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090187
    reference: chr 3
allele count: 19
allele frequency: 1.60926939169617e-4
allele num: 118066
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.89C>T
  hgvsp: ENSP00000249883.5:p.Thr30Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.89C>T
  hgvsp: ENSP00000427482.1:p.Thr30Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.89C>T
  hgvsp: ENSP00000422658.1:p.Thr30Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.89C>T
  hgvsp: ENSP00000427184.1:p.Thr30Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.369C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.89C>T
  hgvsp: ENSP00000409999.2:p.Thr30Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.89C>T
  hgvsp: ENSP00000425475.1:p.Thr30Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.263C>T
  hgvsp: ENSP00000424765.1:p.Thr88Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.89C>T
  hgvsp: ENSP00000424910.1:p.Thr30Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.89C>T
  hgvsp: ENSP00000421521.1:p.Thr30Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.371C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.89C>T
  hgvsp: ENSP00000427292.1:p.Thr30Met
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 18837
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3066
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Thr30Met
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

3-134090188-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090188
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090188
    reference: chr 3
allele count: 1
allele frequency: 8.467257116729607e-6
allele num: 118102
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.370A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.88A>G
  hgvsp: ENSP00000427482.1:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.88A>G
  hgvsp: ENSP00000409999.2:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.88A>G
  hgvsp: ENSP00000425475.1:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.262A>G
  hgvsp: ENSP00000424765.1:p.Thr88Ala
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.88A>G
  hgvsp: ENSP00000422658.1:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.88A>G
  hgvsp: ENSP00000427184.1:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.88A>G
  hgvsp: ENSP00000421521.1:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.368A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.88A>G
  hgvsp: ENSP00000249883.5:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.88A>G
  hgvsp: ENSP00000427292.1:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.88A>G
  hgvsp: ENSP00000424910.1:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr30Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

3-134090190-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090190
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090190
    reference: chr 3
allele count: 3
allele frequency: 2.54000508001016e-5
allele num: 118110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.86G>A
  hgvsp: ENSP00000427482.1:p.Arg29His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.86G>A
  hgvsp: ENSP00000422658.1:p.Arg29His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.86G>A
  hgvsp: ENSP00000409999.2:p.Arg29His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.86G>A
  hgvsp: ENSP00000249883.5:p.Arg29His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.368G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.86G>A
  hgvsp: ENSP00000424910.1:p.Arg29His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.86G>A
  hgvsp: ENSP00000427184.1:p.Arg29His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.260G>A
  hgvsp: ENSP00000424765.1:p.Arg87His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.86G>A
  hgvsp: ENSP00000425475.1:p.Arg29His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.366G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.86G>A
  hgvsp: ENSP00000421521.1:p.Arg29His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.86G>A
  hgvsp: ENSP00000427292.1:p.Arg29His
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg29His
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

3-134090191-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090191
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090191
    reference: chr 3
allele count: 3
allele frequency: 2.539489054802174e-5
allele num: 118134
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.85C>T
  hgvsp: ENSP00000422658.1:p.Arg29Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.365C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.85C>T
  hgvsp: ENSP00000427184.1:p.Arg29Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.85C>T
  hgvsp: ENSP00000409999.2:p.Arg29Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.85C>T
  hgvsp: ENSP00000425475.1:p.Arg29Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.85C>T
  hgvsp: ENSP00000249883.5:p.Arg29Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.259C>T
  hgvsp: ENSP00000424765.1:p.Arg87Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.85C>T
  hgvsp: ENSP00000421521.1:p.Arg29Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.85C>T
  hgvsp: ENSP00000427482.1:p.Arg29Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.85C>T
  hgvsp: ENSP00000424910.1:p.Arg29Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.85C>T
  hgvsp: ENSP00000427292.1:p.Arg29Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.367C>T
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35097
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg29Cys
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD

3-134090193-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090193
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090193
    reference: chr 3
allele count: 31
allele frequency: 2.623694500397786e-4
allele num: 118154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.83C>T
  hgvsp: ENSP00000427184.1:p.Thr28Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.83C>T
  hgvsp: ENSP00000421521.1:p.Thr28Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.83C>T
  hgvsp: ENSP00000424910.1:p.Thr28Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.365C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.363C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.83C>T
  hgvsp: ENSP00000427482.1:p.Thr28Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.83C>T
  hgvsp: ENSP00000422658.1:p.Thr28Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.83C>T
  hgvsp: ENSP00000427292.1:p.Thr28Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.83C>T
  hgvsp: ENSP00000409999.2:p.Thr28Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.83C>T
  hgvsp: ENSP00000425475.1:p.Thr28Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.257C>T
  hgvsp: ENSP00000424765.1:p.Thr86Met
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.83C>T
  hgvsp: ENSP00000249883.5:p.Thr28Met
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18964
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35123
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Thr28Met
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

3-134090209-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090209
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090209
    reference: chr 3
allele count: 1
allele frequency: 8.454800635801008e-6
allele num: 118276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.67G>A
  hgvsp: ENSP00000427184.1:p.Gly23Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.67G>A
  hgvsp: ENSP00000424910.1:p.Gly23Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.67G>A
  hgvsp: ENSP00000421521.1:p.Gly23Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.67G>A
  hgvsp: ENSP00000427292.1:p.Gly23Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.67G>A
  hgvsp: ENSP00000409999.2:p.Gly23Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.67G>A
  hgvsp: ENSP00000427482.1:p.Gly23Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.241G>A
  hgvsp: ENSP00000424765.1:p.Gly81Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.349G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.67G>A
  hgvsp: ENSP00000422658.1:p.Gly23Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.67G>A
  hgvsp: ENSP00000425475.1:p.Gly23Ser
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.347G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.67G>A
  hgvsp: ENSP00000249883.5:p.Gly23Ser
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly23Ser
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

3-134090210-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090210
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090210
    reference: chr 3
allele count: 10
allele frequency: 8.452228007302724e-5
allele num: 118312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.66C>T
  hgvsp: ENST00000515172.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.346C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.66C>T
  hgvsp: ENST00000422605.2:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.66C>T
  hgvsp: ENST00000510560.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.240C>T
  hgvsp: ENST00000514516.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.348C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.66C>T
  hgvsp: ENST00000513145.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.66C>T
  hgvsp: ENST00000504234.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.66C>T
  hgvsp: ENST00000502491.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.66C>T
  hgvsp: ENST00000506107.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.66C>T
  hgvsp: ENST00000249883.5:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.66C>T
  hgvsp: ENST00000505596.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35256
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19229
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Tyr22Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

3-134090214-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090214
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090214
    reference: chr 3
allele count: 2
allele frequency: 1.690245592684617e-5
allele num: 118326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.62G>A
  hgvsp: ENSP00000427292.1:p.Arg21His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.62G>A
  hgvsp: ENSP00000422658.1:p.Arg21His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.62G>A
  hgvsp: ENSP00000424910.1:p.Arg21His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.62G>A
  hgvsp: ENSP00000427184.1:p.Arg21His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.236G>A
  hgvsp: ENSP00000424765.1:p.Arg79His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.62G>A
  hgvsp: ENSP00000249883.5:p.Arg21His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.62G>A
  hgvsp: ENSP00000425475.1:p.Arg21His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.344G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.62G>A
  hgvsp: ENSP00000421521.1:p.Arg21His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.62G>A
  hgvsp: ENSP00000409999.2:p.Arg21His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.342G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.62G>A
  hgvsp: ENSP00000427482.1:p.Arg21His
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Arg21His
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-134090215-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090215
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090215
    reference: chr 3
allele count: 1
allele frequency: 8.447943770486263e-6
allele num: 118372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.61C>T
  hgvsp: ENSP00000425475.1:p.Arg21Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.235C>T
  hgvsp: ENSP00000424765.1:p.Arg79Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.61C>T
  hgvsp: ENSP00000427482.1:p.Arg21Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.343C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.61C>T
  hgvsp: ENSP00000249883.5:p.Arg21Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.61C>T
  hgvsp: ENSP00000422658.1:p.Arg21Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.61C>T
  hgvsp: ENSP00000409999.2:p.Arg21Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.341C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.61C>T
  hgvsp: ENSP00000427184.1:p.Arg21Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.61C>T
  hgvsp: ENSP00000424910.1:p.Arg21Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.61C>T
  hgvsp: ENSP00000427292.1:p.Arg21Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.61C>T
  hgvsp: ENSP00000421521.1:p.Arg21Cys
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19307
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg21Cys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

3-134090235-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090235
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090235
    reference: chr 3
allele count: 1
allele frequency: 8.462957634434082e-6
allele num: 118162
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.41G>A
  hgvsp: ENSP00000422658.1:p.Arg14His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.41G>A
  hgvsp: ENSP00000421521.1:p.Arg14His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.41G>A
  hgvsp: ENSP00000427482.1:p.Arg14His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.323G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.41G>A
  hgvsp: ENSP00000427292.1:p.Arg14His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.41G>A
  hgvsp: ENSP00000427184.1:p.Arg14His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.41G>A
  hgvsp: ENSP00000425475.1:p.Arg14His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.215G>A
  hgvsp: ENSP00000424765.1:p.Arg72His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.41G>A
  hgvsp: ENSP00000409999.2:p.Arg14His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.41G>A
  hgvsp: ENSP00000424910.1:p.Arg14His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.41G>A
  hgvsp: ENSP00000249883.5:p.Arg14His
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.321G>A
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35036
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg14His
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

3-134090236-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090236
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090236
    reference: chr 3
allele count: 2
allele frequency: 1.692562878710944e-5
allele num: 118164
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.322C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.40C>T
  hgvsp: ENSP00000424910.1:p.Arg14Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.40C>T
  hgvsp: ENSP00000421521.1:p.Arg14Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.320C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.40C>T
  hgvsp: ENSP00000425475.1:p.Arg14Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.40C>T
  hgvsp: ENSP00000427482.1:p.Arg14Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.40C>T
  hgvsp: ENSP00000427184.1:p.Arg14Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.214C>T
  hgvsp: ENSP00000424765.1:p.Arg72Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.40C>T
  hgvsp: ENSP00000249883.5:p.Arg14Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.40C>T
  hgvsp: ENSP00000409999.2:p.Arg14Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.40C>T
  hgvsp: ENSP00000422658.1:p.Arg14Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.40C>T
  hgvsp: ENSP00000427292.1:p.Arg14Cys
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg14Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

3-134090237-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090237
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090237
    reference: chr 3
allele count: 70
allele frequency: 5.925775430041988e-4
allele num: 118128
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.213C>T
  hgvsp: ENST00000514516.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.319C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.39C>T
  hgvsp: ENST00000513145.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.39C>T
  hgvsp: ENST00000502491.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.39C>T
  hgvsp: ENST00000504234.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.39C>T
  hgvsp: ENST00000515172.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.39C>T
  hgvsp: ENST00000422605.2:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.39C>T
  hgvsp: ENST00000249883.5:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.39C>T
  hgvsp: ENST00000510560.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.39C>T
  hgvsp: ENST00000505596.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.39C>T
  hgvsp: ENST00000506107.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.321C>T
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19362
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35039
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His13His
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP

3-134090247-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090247
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090247
    reference: chr 3
allele count: 2
allele frequency: 1.695346274476562e-5
allele num: 117970
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.311C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.29C>T
  hgvsp: ENSP00000249883.5:p.Thr10Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.29C>T
  hgvsp: ENSP00000409999.2:p.Thr10Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.29C>T
  hgvsp: ENSP00000422658.1:p.Thr10Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.29C>T
  hgvsp: ENSP00000425475.1:p.Thr10Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.29C>T
  hgvsp: ENSP00000421521.1:p.Thr10Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.29C>T
  hgvsp: ENSP00000427184.1:p.Thr10Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.309C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.203C>T
  hgvsp: ENSP00000424765.1:p.Thr68Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.29C>T
  hgvsp: ENSP00000427292.1:p.Thr10Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.29C>T
  hgvsp: ENSP00000427482.1:p.Thr10Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.29C>T
  hgvsp: ENSP00000424910.1:p.Thr10Ile
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr10Ile
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum

3-134090252-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090252
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090252
    reference: chr 3
allele count: 3
allele frequency: 2.544831447330472e-5
allele num: 117886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.24G>A
  hgvsp: ENST00000502491.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.24G>A
  hgvsp: ENST00000513145.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.24G>A
  hgvsp: ENST00000515172.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.24G>A
  hgvsp: ENST00000249883.5:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.198G>A
  hgvsp: ENST00000514516.1:c.198G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.24G>A
  hgvsp: ENST00000510560.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.304G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.24G>A
  hgvsp: ENST00000504234.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.24G>A
  hgvsp: ENST00000505596.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.306G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.24G>A
  hgvsp: ENST00000506107.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.24G>A
  hgvsp: ENST00000422605.2:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser8Ser
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

3-134090255-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090255
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090255
    reference: chr 3
allele count: 2
allele frequency: 1.697187759881876e-5
allele num: 117842
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.21C>T
  hgvsp: ENST00000502491.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.21C>T
  hgvsp: ENST00000510560.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.303C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.21C>T
  hgvsp: ENST00000513145.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.21C>T
  hgvsp: ENST00000515172.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.21C>T
  hgvsp: ENST00000506107.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.195C>T
  hgvsp: ENST00000514516.1:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.21C>T
  hgvsp: ENST00000422605.2:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.301C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.21C>T
  hgvsp: ENST00000504234.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.21C>T
  hgvsp: ENST00000249883.5:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.21C>T
  hgvsp: ENST00000505596.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser7Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-134090260-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090260
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090260
    reference: chr 3
allele count: 1
allele frequency: 8.49285750683675e-6
allele num: 117746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.16G>A
  hgvsp: ENSP00000421521.1:p.Asp6Asn
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.16G>A
  hgvsp: ENSP00000409999.2:p.Asp6Asn
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.16G>A
  hgvsp: ENSP00000422658.1:p.Asp6Asn
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.190G>A
  hgvsp: ENSP00000424765.1:p.Asp64Asn
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.296G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.16G>A
  hgvsp: ENSP00000427292.1:p.Asp6Asn
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.16G>A
  hgvsp: ENSP00000425475.1:p.Asp6Asn
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.16G>A
  hgvsp: ENSP00000424910.1:p.Asp6Asn
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.16G>A
  hgvsp: ENSP00000427184.1:p.Asp6Asn
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.16G>A
  hgvsp: ENSP00000427482.1:p.Asp6Asn
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.298G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.16G>A
  hgvsp: ENSP00000249883.5:p.Asp6Asn
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19466
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp6Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

3-134090263-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090263
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090263
    reference: chr 3
allele count: 1
allele frequency: 8.499354049092269e-6
allele num: 117656
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.13G>C
  hgvsp: ENSP00000422658.1:p.Glu5Gln
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.13G>C
  hgvsp: ENSP00000424910.1:p.Glu5Gln
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.13G>C
  hgvsp: ENSP00000427482.1:p.Glu5Gln
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.13G>C
  hgvsp: ENSP00000249883.5:p.Glu5Gln
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.13G>C
  hgvsp: ENSP00000409999.2:p.Glu5Gln
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.13G>C
  hgvsp: ENSP00000427184.1:p.Glu5Gln
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.295G>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.293G>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.13G>C
  hgvsp: ENSP00000427292.1:p.Glu5Gln
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.13G>C
  hgvsp: ENSP00000425475.1:p.Glu5Gln
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.187G>C
  hgvsp: ENSP00000424765.1:p.Glu63Gln
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.13G>C
  hgvsp: ENSP00000421521.1:p.Glu5Gln
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu5Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

3-134090264-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090264
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090264
    reference: chr 3
allele count: 5
allele frequency: 4.249821507496685e-5
allele num: 117652
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.12G>C
  hgvsp: ENST00000515172.1:c.12G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.12G>C
  hgvsp: ENST00000510560.1:c.12G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.12G>C
  hgvsp: ENST00000506107.1:c.12G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.12G>C
  hgvsp: ENST00000513145.1:c.12G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.12G>C
  hgvsp: ENST00000249883.5:c.12G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.12G>C
  hgvsp: ENST00000505596.1:c.12G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.12G>C
  hgvsp: ENST00000502491.1:c.12G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.294G>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.292G>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.12G>C
  hgvsp: ENST00000422605.2:c.12G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.12G>C
  hgvsp: ENST00000504234.1:c.12G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.186G>C
  hgvsp: ENST00000514516.1:c.186G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34750
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu4Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

3-134090265-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090265
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090265
    reference: chr 3
allele count: 1
allele frequency: 8.499209573509664e-6
allele num: 117658
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.11T>C
  hgvsp: ENSP00000409999.2:p.Leu4Pro
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.291T>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.185T>C
  hgvsp: ENSP00000424765.1:p.Leu62Pro
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.11T>C
  hgvsp: ENSP00000421521.1:p.Leu4Pro
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.293T>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.11T>C
  hgvsp: ENSP00000427184.1:p.Leu4Pro
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.11T>C
  hgvsp: ENSP00000424910.1:p.Leu4Pro
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.11T>C
  hgvsp: ENSP00000422658.1:p.Leu4Pro
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.11T>C
  hgvsp: ENSP00000425475.1:p.Leu4Pro
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.11T>C
  hgvsp: ENSP00000427292.1:p.Leu4Pro
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.11T>C
  hgvsp: ENSP00000249883.5:p.Leu4Pro
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.11T>C
  hgvsp: ENSP00000427482.1:p.Leu4Pro
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu4Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

3-134090268-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090268
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090268
    reference: chr 3
allele count: 1
allele frequency: 8.506439374606578e-6
allele num: 117558
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.8C>T
  hgvsp: ENSP00000427482.1:p.Thr3Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.290C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.288C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.182C>T
  hgvsp: ENSP00000424765.1:p.Thr61Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.8C>T
  hgvsp: ENSP00000424910.1:p.Thr3Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.8C>T
  hgvsp: ENSP00000249883.5:p.Thr3Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.8C>T
  hgvsp: ENSP00000409999.2:p.Thr3Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.8C>T
  hgvsp: ENSP00000427184.1:p.Thr3Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.8C>T
  hgvsp: ENSP00000422658.1:p.Thr3Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.8C>T
  hgvsp: ENSP00000421521.1:p.Thr3Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.8C>T
  hgvsp: ENSP00000425475.1:p.Thr3Ile
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.8C>T
  hgvsp: ENSP00000427292.1:p.Thr3Ile
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr3Ile
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

3-134090270-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090270
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090270
    reference: chr 3
allele count: 2
allele frequency: 1.702359470225733e-5
allele num: 117484
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.6G>A
  hgvsp: ENST00000504234.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.6G>A
  hgvsp: ENST00000510560.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.6G>A
  hgvsp: ENST00000422605.2:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.6G>A
  hgvsp: ENST00000505596.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.6G>A
  hgvsp: ENST00000515172.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.180G>A
  hgvsp: ENST00000514516.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.6G>A
  hgvsp: ENST00000506107.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.6G>A
  hgvsp: ENST00000513145.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.288G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.286G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.6G>A
  hgvsp: ENST00000249883.5:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.6G>A
  hgvsp: ENST00000502491.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34606
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg2Arg
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP

3-134090271-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090271
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090271
    reference: chr 3
allele count: 1
allele frequency: 8.516291665956975e-6
allele num: 117422
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.5G>A
  hgvsp: ENSP00000424910.1:p.Arg2Lys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.5G>A
  hgvsp: ENSP00000249883.5:p.Arg2Lys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.5G>A
  hgvsp: ENSP00000421521.1:p.Arg2Lys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.5G>A
  hgvsp: ENSP00000425475.1:p.Arg2Lys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.5G>A
  hgvsp: ENSP00000427184.1:p.Arg2Lys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.5G>A
  hgvsp: ENSP00000427292.1:p.Arg2Lys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.287G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.285G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.179G>A
  hgvsp: ENSP00000424765.1:p.Arg60Lys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.5G>A
  hgvsp: ENSP00000427482.1:p.Arg2Lys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.5G>A
  hgvsp: ENSP00000422658.1:p.Arg2Lys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.5G>A
  hgvsp: ENSP00000409999.2:p.Arg2Lys
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34550
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg2Lys
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ

3-134090280-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090280
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090280
    reference: chr 3
allele count: 27
allele frequency: 2.308678922616503e-4
allele num: 116950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-5G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-5G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-5G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.278G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.170G>A
  hgvsp: ENSP00000424765.1:p.Arg57Lys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-5G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-5G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.276G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-5G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-5G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-5G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-5G>A
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3041
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19280
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg57Lys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum

3-134090282-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090282
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090282
    reference: chr 3
allele count: 84
allele frequency: 7.18452248584478e-4
allele num: 116918
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-7A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-7A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-7A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-7A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-7A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.276A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-7A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.274A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-7A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.168A>G
  hgvsp: ENST00000514516.1:c.168A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-7A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-7A>G
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 34041
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19241
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gln56Gln
num of homozygotes: 2
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

3-134090287-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090287
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090287
    reference: chr 3
allele count: 2
allele frequency: 1.715589562353103e-5
allele num: 116578
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-12A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.163A>G
  hgvsp: ENSP00000424765.1:p.Ser55Gly
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-12A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-12A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-12A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-12A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.269A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-12A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-12A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-12A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.271A>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-12A>G
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19094
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser55Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

3-134090292-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090292
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090292
    reference: chr 3
allele count: 1
allele frequency: 8.610297916307904e-6
allele num: 116140
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-17G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-17G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-17G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-17G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.158G>A
  hgvsp: ENSP00000424765.1:p.Cys53Tyr
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.266G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.264G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-17G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-17G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-17G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-17G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-17G>A
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33691
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18922
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys53Tyr
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

3-134090299-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090299
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090299
    reference: chr 3
allele count: 3
allele frequency: 2.596773076656741e-5
allele num: 115528
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-24C>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-24C>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-24C>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-24C>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.151C>A
  hgvsp: ENSP00000424765.1:p.Gln51Lys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-24C>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-24C>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-24C>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-24C>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-24C>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.259C>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.257C>A
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln51Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

3-134090304-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090304
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090304
    reference: chr 3
allele count: 1
allele frequency: 8.712622847982157e-6
allele num: 114776
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.146C>G
  hgvsp: ENSP00000424765.1:p.Ser49Cys
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-29C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-29C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-29C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.252C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-29C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-29C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-29C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.254C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-29C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-29C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-29C>G
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser49Cys
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum

3-134090311-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090311
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090311
    reference: chr 3
allele count: 1
allele frequency: 8.763934656103204e-6
allele num: 114104
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-36C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-36C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-36C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-36C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-36C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.245C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.247C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-36C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.139C>G
  hgvsp: ENSP00000424765.1:p.Pro47Ala
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-36C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-36C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-36C>G
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro47Ala
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

3-134090313-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090313
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090313
    reference: chr 3
allele count: 7
allele frequency: 6.151250461343784e-5
allele num: 113798
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.137G>A
  hgvsp: ENSP00000424765.1:p.Arg46Gln
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.245G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.243G>A
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg46Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

3-134090314-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090314
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090314
    reference: chr 3
allele count: 7
allele frequency: 6.184401173269251e-5
allele num: 113188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.242C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.136C>T
  hgvsp: ENSP00000424765.1:p.Arg46Trp
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-39C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.244C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-39C>T
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg46Trp
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

3-134090319-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090319
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090319
    reference: chr 3
allele count: 1
allele frequency: 8.912655971479501e-6
allele num: 112200
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-44G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-44G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-44G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.237G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-44G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-44G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.131G>A
  hgvsp: ENSP00000424765.1:p.Cys44Tyr
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-44G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-44G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-44G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-44G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.239G>A
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29868
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys44Tyr
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

3-134090324-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090324
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090324
    reference: chr 3
allele count: 1
allele frequency: 8.964750600638291e-6
allele num: 111548
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-49C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-49C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-49C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-49C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.232C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-49C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-49C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-49C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.126C>G
  hgvsp: ENST00000514516.1:c.126C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-49C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.234C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-49C>G
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5031
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala42Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

3-134090325-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090325
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090325
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 111268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-50C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-50C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-50C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-50C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.231C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-50C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.125C>T
  hgvsp: ENSP00000424765.1:p.Ala42Val
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-50C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.233C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-50C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-50C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-50C>T
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2725
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala42Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/3-134090327-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090327
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090327
    reference: chr 3
allele count: 1
allele frequency: 9.038812661568777e-6
allele num: 110634
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-52G>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-52G>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-52G>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.123G>T
  hgvsp: ENST00000514516.1:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.229G>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-52G>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-52G>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-52G>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.231G>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-52G>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-52G>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-52G>T
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27872
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3708
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly41Gly
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

3-134090340-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090340
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090340
    reference: chr 3
allele count: 1
allele frequency: 9.380863039399625e-6
allele num: 106600
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-61-4C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.220-4C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.114-4C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-61-4C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.222-4C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-61-4C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-61-4C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-61-4C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-61-4C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-61-4C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-61-4C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-61-4C>G
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6725
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.-61-4C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

3-134197389-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134197389
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134197389
    reference: chr 3
allele count: 1
allele frequency: 8.25218682950982e-6
allele num: 121180
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000129055
  ensembl protein: ENSP00000421842
  ensembl transcript: ENST00000510994
  gene symbol: ANAPC13
  hgvsc: ENST00000510994.1:c.*43A>G
  variant of: http://identifiers.org/hgnc/24540
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000129055
  ensembl protein: ENSP00000346987
  ensembl transcript: ENST00000354910
  gene symbol: ANAPC13
  hgvsc: ENST00000354910.5:c.*43A>G
  variant of: http://identifiers.org/hgnc/24540
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000129055
  ensembl protein: ENSP00000421760
  ensembl transcript: ENST00000511751
  gene symbol: ANAPC13
  hgvsc: ENST00000511751.1:c.*43A>G
  variant of: http://identifiers.org/hgnc/24540
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000129055
  ensembl protein: ENSP00000427327
  ensembl transcript: ENST00000514612
  gene symbol: ANAPC13
  hgvsc: ENST00000514612.1:c.*43A>G
  variant of: http://identifiers.org/hgnc/24540
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000129055
  ensembl transcript: ENST00000508755
  gene symbol: ANAPC13
  hgvsc: ENST00000508755.1:n.617A>G
  variant of: http://identifiers.org/hgnc/24540
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5512
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3240
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2010
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3132
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4262
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4846
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

3-134090345-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090345
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090345
    reference: chr 3
allele count: 1
allele frequency: 9.560046653027666e-6
allele num: 104602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-61-9C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.220-9C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.222-9C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.114-9C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-61-9C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-61-9C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-61-9C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-61-9C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-61-9C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-61-9C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-61-9C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-61-9C>T
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13093
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7637
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

3-134090348-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090348
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090348
    reference: chr 3
allele count: 1
allele frequency: 9.695559433779328e-6
allele num: 103140
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-61-12A>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-61-12A>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.220-12A>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-61-12A>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-61-12A>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-61-12A>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-61-12A>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.114-12A>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-61-12A>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-61-12A>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.222-12A>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-61-12A>C
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15034
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8350
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

3-134090351-G-GGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090351
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090353
    reference: chr 3
allele count: 5
allele frequency: 5.923188096761201e-5
allele num: 84414
alternate allele: GGA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-61-17_-61-16dupTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-61-17_-61-16dupTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.114-17_114-16dupTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.220-17_220-16dupTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.222-17_222-16dupTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-61-17_-61-16dupTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-61-17_-61-16dupTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-61-17_-61-16dupTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-61-17_-61-16dupTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-61-17_-61-16dupTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-61-17_-61-16dupTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-61-17_-61-16dupTC
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17131
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9635
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6675
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD

3-134090351-G-GGAGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090351
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090355
    reference: chr 3
allele count: 1
allele frequency: 1.18463761935224e-5
allele num: 84414
alternate allele: GGAGA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-61-19_-61-16dupTCTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.222-19_222-16dupTCTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-61-19_-61-16dupTCTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.220-19_220-16dupTCTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-61-19_-61-16dupTCTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-61-19_-61-16dupTCTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-61-19_-61-16dupTCTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-61-19_-61-16dupTCTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.114-19_114-16dupTCTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-61-19_-61-16dupTCTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-61-19_-61-16dupTCTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-61-19_-61-16dupTCTC
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 6675
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17131
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9635
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

3-134090351-GGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090351
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090349
    reference: chr 3
allele count: 761
allele frequency: 9.015092283270548e-3
allele num: 84414
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.220-17_220-16delTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-61-17_-61-16delTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-61-17_-61-16delTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-61-17_-61-16delTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.114-17_114-16delTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-61-17_-61-16delTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-61-17_-61-16delTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-61-17_-61-16delTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.222-17_222-16delTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-61-17_-61-16delTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-61-17_-61-16delTC
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-61-17_-61-16delTC
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 8335
  bin: 2.75e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 3.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17131
  bin: 1.25e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9635
  bin: 1.75e1
  variant carriers: 277
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6675
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 12559
  bin: 2.25e1
  variant carriers: 241
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: GGA
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

3-134090358-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090358
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090358
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 96786
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.114-22C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-61-22C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-61-22C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-61-22C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-61-22C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.220-22C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-61-22C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-61-22C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-61-22C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-61-22C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.222-22C>G
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-61-22C>G
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 7451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8886
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

3-134090360-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090360
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090360
    reference: chr 3
allele count: 4
allele frequency: 4.165104752384522e-5
allele num: 96036
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.220-24C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-61-24C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-61-24C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-61-24C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-61-24C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-61-24C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-61-24C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-61-24C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-61-24C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.222-24C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-61-24C>T
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.114-24C>T
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8142
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23932
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9041
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9563
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

3-134090362-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090362
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090361
    reference: chr 3
allele count: 1
allele frequency: 1.050287778851405e-5
allele num: 95212
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-61-27delT
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-61-27delT
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-61-27delT
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-61-27delT
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.222-27delT
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.114-27delT
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-61-27delT
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-61-27delT
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-61-27delT
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.220-27delT
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-61-27delT
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-61-27delT
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8676
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8841
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: GA
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD

3-134090374-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090374
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090374
    reference: chr 3
allele count: 1
allele frequency: 1.157809424568716e-5
allele num: 86370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-61-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.220-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-61-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-61-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-61-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-61-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.114-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-61-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-61-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-61-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-61-38G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.222-38G>A
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11646
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13501
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24254
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

3-134090375-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090375
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090375
    reference: chr 3
allele count: 1
allele frequency: 1.14105753212077e-5
allele num: 87638
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-61-39T>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-61-39T>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-61-39T>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-61-39T>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-61-39T>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-61-39T>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-61-39T>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-61-39T>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.220-39T>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-61-39T>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.222-39T>C
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.114-39T>C
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11735
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24360
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

3-134090384-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134090384
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134090384
    reference: chr 3
allele count: 1
allele frequency: 1.278543483263866e-5
allele num: 78214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.114-48G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000409999
  ensembl transcript: ENST00000422605
  gene symbol: AMOTL2
  hgvsc: ENST00000422605.2:c.-61-48G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000512955
  gene symbol: AMOTL2
  hgvsc: ENST00000512955.1:n.220-48G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424910
  ensembl transcript: ENST00000504234
  gene symbol: AMOTL2
  hgvsc: ENST00000504234.1:c.-61-48G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000425475
  ensembl transcript: ENST00000513145
  gene symbol: AMOTL2
  hgvsc: ENST00000513145.1:c.-61-48G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000422658
  ensembl transcript: ENST00000506107
  gene symbol: AMOTL2
  hgvsc: ENST00000506107.1:c.-61-48G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427184
  ensembl transcript: ENST00000510560
  gene symbol: AMOTL2
  hgvsc: ENST00000510560.1:c.-61-48G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427292
  ensembl transcript: ENST00000505596
  gene symbol: AMOTL2
  hgvsc: ENST00000505596.1:c.-61-48G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000421521
  ensembl transcript: ENST00000502491
  gene symbol: AMOTL2
  hgvsc: ENST00000502491.1:c.-61-48G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000249883
  ensembl transcript: ENST00000249883
  gene symbol: AMOTL2
  hgvsc: ENST00000249883.5:c.-61-48G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000427482
  ensembl transcript: ENST00000515172
  gene symbol: AMOTL2
  hgvsc: ENST00000515172.1:c.-61-48G>A
  variant of: http://identifiers.org/hgnc/17812
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl transcript: ENST00000511759
  gene symbol: AMOTL2
  hgvsc: ENST00000511759.1:n.222-48G>A
  variant of: http://identifiers.org/hgnc/17812
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12655
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum

3-134093998-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134093998
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134093998
    reference: chr 3
allele count: 2
allele frequency: 1.925298421255295e-4
allele num: 10388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.113+32C>T
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2631
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 5.319148936170213e-3
  allele num: 188
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 1.375894331315355e-4
  allele num: 7268
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 132
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD

3-134094005-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134094005
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134094005
    reference: chr 3
allele count: 3
allele frequency: 2.880737468792011e-4
allele num: 10414
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.113+25T>A
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1585
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2894
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2598
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 132
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 190
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

3-134094011-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134094011
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134094011
    reference: chr 3
allele count: 1
allele frequency: 9.569377990430622e-5
allele num: 10450
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.113+19C>T
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1601
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 188
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 3.831417624521073e-4
  allele num: 2610
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 132
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP

3-134094058-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134094058
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134094058
    reference: chr 3
allele count: 1
allele frequency: 9.307520476545048e-5
allele num: 10744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.85G>A
  hgvsp: ENSP00000424765.1:p.Glu29Lys
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3805
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1790
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu29Lys
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2708
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 1.332622601279318e-4
  allele num: 7504
  num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

3-134094085-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134094085
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134094085
    reference: chr 3
allele count: 1
allele frequency: 9.291953168556031e-5
allele num: 10762
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.58A>G
  hgvsp: ENSP00000424765.1:p.Ile20Val
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1933
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3817
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile20Val
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 1.332267519317879e-4
  allele num: 7506
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 190
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

3-134094099-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134094099
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134094099
    reference: chr 3
allele count: 1
allele frequency: 9.291953168556031e-5
allele num: 10762
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.44G>A
  hgvsp: ENSP00000424765.1:p.Arg15His
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2277
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3817
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg15His
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 1.332267519317879e-4
  allele num: 7506
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

3-134094107-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134094107
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134094107
    reference: chr 3
allele count: 1
allele frequency: 9.293680297397769e-5
allele num: 10760
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.36C>A
  hgvsp: ENSP00000424765.1:p.Cys12Ter
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2115
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3813
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Cys12Ter
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2724
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 190
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

3-134094111-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134094111
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134094111
    reference: chr 3
allele count: 2
allele frequency: 1.858736059479554e-4
allele num: 10760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.32C>T
  hgvsp: ENSP00000424765.1:p.Pro11Leu
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3810
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro11Leu
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 190
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

3-134094133-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134094133
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134094133
    reference: chr 3
allele count: 1
allele frequency: 9.307520476545048e-5
allele num: 10744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.10C>T
  hgvsp: ENSP00000424765.1:p.Arg4Ter
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3750
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg4Ter
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 118
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 1.332977872567315e-4
  allele num: 7502
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

3-134094147-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134094147
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134094147
    reference: chr 3
allele count: 1
allele frequency: 9.342301943198804e-5
allele num: 10704
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.-5A>G
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2317
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3625
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 90
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 132
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 190
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

3-134094184-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134094184
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134094184
    reference: chr 3
allele count: 1
allele frequency: 9.428625306430322e-5
allele num: 10606
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.-42T>C
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2262
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2168
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2640
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 90
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

3-134094188-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134094188
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134094188
    reference: chr 3
allele count: 1
allele frequency: 9.442870632672332e-5
allele num: 10590
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000114019
  ensembl protein: ENSP00000424765
  ensembl transcript: ENST00000514516
  gene symbol: AMOTL2
  hgvsc: ENST00000514516.1:c.-46A>T
  variant of: http://identifiers.org/hgnc/17812
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2221
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 90
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 1.345532831001076e-4
  allele num: 7432
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/3-134156623-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134156623
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134156623
    reference: chr 3
allele count: 1
allele frequency: 9.895111814763507e-6
allele num: 101060
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214288
  ensembl transcript: ENST00000511263
  gene symbol: HMGB3P13
  hgvsc: ENST00000511263.1:n.177A>C
  variant of: http://identifiers.org/hgnc/39305
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25922
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2286
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5786
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9853
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34951
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.764353011750591e-5
  allele num: 56678
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 766
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7590
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

3-134156631-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134156631
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134156631
    reference: chr 3
allele count: 1
allele frequency: 1.01990861618799e-5
allele num: 98048
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214288
  ensembl transcript: ENST00000511263
  gene symbol: HMGB3P13
  hgvsc: ENST00000511263.1:n.185G>C
  variant of: http://identifiers.org/hgnc/39305
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5801
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24245
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2605
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33445
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12040
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5403
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10544
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10316
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7382
  num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

3-134156634-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134156634
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134156634
    reference: chr 3
allele count: 1
allele frequency: 1.0388099393335e-5
allele num: 96264
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214288
  ensembl transcript: ENST00000511263
  gene symbol: HMGB3P13
  hgvsc: ENST00000511263.1:n.188A>G
  variant of: http://identifiers.org/hgnc/39305
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8994
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5824
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10703
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5348
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13354
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31941
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6318
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.849386003846723e-5
  allele num: 54072
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7560
  num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP

3-134156642-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134156642
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134156642
    reference: chr 3
allele count: 1
allele frequency: 1.10938540048813e-5
allele num: 90140
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214288
  ensembl transcript: ENST00000511263
  gene symbol: HMGB3P13
  hgvsc: ENST00000511263.1:n.196G>C
  variant of: http://identifiers.org/hgnc/39305
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8714
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19696
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3349
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17497
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28424
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3556
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6744
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6160
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9240
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

3-134156643-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134156643
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134156643
    reference: chr 3
allele count: 1
allele frequency: 1.120347755943445e-5
allele num: 89258
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214288
  ensembl transcript: ENST00000511263
  gene symbol: HMGB3P13
  hgvsc: ENST00000511263.1:n.197G>A
  variant of: http://identifiers.org/hgnc/39305
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11726
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9023
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3970
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10474
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3402
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3520
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18156
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27820
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9274
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 50288
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 1
  allele frequency: 1.504211793020457e-4
  allele num: 6648
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

3-134156657-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 134156657
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 134156657
    reference: chr 3
allele count: 1
allele frequency: 1.301812122474485e-5
allele num: 76816
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214288
  ensembl transcript: ENST00000511263
  gene symbol: HMGB3P13
  hgvsc: ENST00000511263.1:n.211C>T
  variant of: http://identifiers.org/hgnc/39305
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4763
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49538
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2038
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5155
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9478
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166044776119403e-4
allele num: 8576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64794
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 4.79e0

MQRankSum
type: SiteQuality
SIO_000300: -8.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.134e0

MQ
type: SiteQuality
SIO_000300: 5.921e1

FS
type: SiteQuality
SIO_000300: 2.793e0

VQSLOD
type: SiteQuality
SIO_000300: -3.552e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.625e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e0

DP
type: SiteQuality
SIO_000300: 1.419788e6

GenotypeDepth
all individuals: 18618
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49595
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1986
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5154
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.032140691328078e-4
allele num: 16490
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.67e-1

QD
type: SiteQuality
SIO_000300: 1.211e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
type: SiteQuality
SIO_000300: 1.420604e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.329e0

GenotypeDepth
all individuals: 18692
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2034
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5150
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49876
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 933
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64792
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.424830261881668e-4
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

DP
type: SiteQuality
SIO_000300: 1.422235e6

QD
type: SiteQuality
SIO_000300: 1.405e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.919999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.739e0

GenotypeDepth
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 49873
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2014
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5152
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.543448062972681e-5
allele num: 64790
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9488
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.408e0

DP
type: SiteQuality
SIO_000300: 1.422305e6

MQRankSum
type: SiteQuality
SIO_000300: -1.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.63e-1

QD
type: SiteQuality
SIO_000300: 1.022e1

FS
type: SiteQuality
SIO_000300: 6.478e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.75e0

MQ
type: SiteQuality
SIO_000300: 5.829e1

VQSLOD
type: SiteQuality
SIO_000300: -4.383e0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35038
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 245
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 90
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49673
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1958
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5144
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 921
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 18
allele frequency: 1.090776875530239e-3
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.545356204605162e-5
allele num: 64710
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 1.423875e6

MQRankSum
type: SiteQuality
SIO_000300: -1.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

QD
type: SiteQuality
SIO_000300: 1.217e1

VQSLOD
type: SiteQuality
SIO_000300: 4.26e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 49708
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1940
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5155
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544783266907653e-5
allele num: 64734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.156e0

FS
type: SiteQuality
SIO_000300: 5.339e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.359e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

QD
type: SiteQuality
SIO_000300: 7.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e-1

DP
type: SiteQuality
SIO_000300: 1.422831e6

GenotypeDepth
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1945
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49682
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 626
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5112
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.115059221658206e-4
allele num: 9456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

VQSLOD
type: SiteQuality
SIO_000300: 7.85e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.42e-1

FS
type: SiteQuality
SIO_000300: 4.834e0

DP
type: SiteQuality
SIO_000300: 1.424958e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.44e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

QD
type: SiteQuality
SIO_000300: 1.353e1

GenotypeDepth
all individuals: 1
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49918
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5139
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 323
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1924
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212121212121212e-4
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.54421075388369e-5
allele num: 64758
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.778e0

MQRankSum
type: SiteQuality
SIO_000300: 6.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.16e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

DP
type: SiteQuality
SIO_000300: 1.424829e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

QD
type: SiteQuality
SIO_000300: 1.439e1

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 2

GenotypeDepth
all individuals: 1
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50012
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1909
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 9.75e1
variant carriers: 31

GenotypeQuality
all individuals: 5142
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.550040130888436e-4
allele num: 64788
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.057305984351871e-4
allele num: 9458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 7
allele frequency: 1.08695652173913e-3
allele num: 6440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

QD
type: SiteQuality
SIO_000300: 1.392e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

DP
type: SiteQuality
SIO_000300: 1.426792e6

FS
type: SiteQuality
SIO_000300: 5.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-1

GenotypeDepth
all individuals: 35233
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3105
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5155
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50233
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1773
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.54206760424377e-5
allele num: 64848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.43025e6

QD
type: SiteQuality
SIO_000300: 1.191e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.51e-1

GenotypeDepth
all individuals: 22
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5147
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50420
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1770
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 158
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.945650286508074e-4
allele num: 11518
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.054407423028258e-4
allele num: 9484
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167406023815083e-4
allele num: 8566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.27e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 5.052e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.79e-1

DP
type: SiteQuality
SIO_000300: 1.431407e6

QD
type: SiteQuality
SIO_000300: 1.259e1

GenotypeDepth
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50524
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1715
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 620
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 933
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5145
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.735809755250825e-4
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64876
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.702e0

FS
type: SiteQuality
SIO_000300: 2.421e0

MQRankSum
type: SiteQuality
SIO_000300: 8.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.14e-1

DP
type: SiteQuality
SIO_000300: 1.43162e6

QD
type: SiteQuality
SIO_000300: 1.503e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.183e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

GenotypeDepth
all individuals: 35347
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1719
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50671
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 934
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540879534038029e-5
allele num: 64898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.954e0

MQRankSum
type: SiteQuality
SIO_000300: -8.149999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.432223e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.87e-1

QD
type: SiteQuality
SIO_000300: 1.376e1

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5157
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 932
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50404
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9432
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-1

QD
type: SiteQuality
SIO_000300: 9.49e0

VQSLOD
type: SiteQuality
SIO_000300: -1.607e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-1

FS
type: SiteQuality
SIO_000300: 1.1058e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.43048e6

MQRankSum
type: SiteQuality
SIO_000300: -9.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeDepth
all individuals: 873
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 49
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50538
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5160
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168770453482936e-4
allele num: 8556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64776
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.604e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.172e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.286e0

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

DP
type: SiteQuality
SIO_000300: 1.430772e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.27e-1

GenotypeDepth
all individuals: 8
bin: 5.25e1
variant carriers: 3

GenotypeDepth
all individuals: 11
bin: 5.75e1
variant carriers: 8

GenotypeDepth
all individuals: 53
bin: 4.25e1
variant carriers: 8

GenotypeQuality
all individuals: 154
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 112
bin: 9.75e1
variant carriers: 68

GenotypeQuality
all individuals: 30
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1736
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5149
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50431
bin: 6.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

African
type: Population
allele count: 69
allele frequency: 7.32017823042648e-3
allele num: 9426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544449249397665e-5
allele num: 64748
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.862e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.198e1

VQSLOD
type: SiteQuality
SIO_000300: 5.45e0

DP
type: SiteQuality
SIO_000300: 1.431689e6

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1768
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 924
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50486
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5158
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.09377223648795e-5
allele num: 64646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.859e0

VQSLOD
type: SiteQuality
SIO_000300: 2.79e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

QD
type: SiteQuality
SIO_000300: 1.086e1

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-1

DP
type: SiteQuality
SIO_000300: 1.428466e6

FS
type: SiteQuality
SIO_000300: 9.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e-1

GenotypeDepth
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1313
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 311
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1835
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50495
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5134
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.34246896228625e-4
allele num: 8538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.675e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.428408e6

VQSLOD
type: SiteQuality
SIO_000300: 2.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.392e1

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 906
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50571
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5158
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1883
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.097605550909147e-5
allele num: 64566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.47e-1

DP
type: SiteQuality
SIO_000300: 1.427266e6

VQSLOD
type: SiteQuality
SIO_000300: 6.22e-1

QD
type: SiteQuality
SIO_000300: 1.044e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.41e0

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5147
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1960
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50401
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 120
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.173158141717503e-4
allele num: 8524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9330
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.448e0

QD
type: SiteQuality
SIO_000300: 9.43e0

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.29e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

FS
type: SiteQuality
SIO_000300: 1.846e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.9e-1

DP
type: SiteQuality
SIO_000300: 1.425181e6

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1997
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5129
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 899
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50354
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55077228459773e-5
allele num: 64484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.697e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e0

VQSLOD
type: SiteQuality
SIO_000300: -2.679e-1

DP
type: SiteQuality
SIO_000300: 1.424244e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

MQRankSum
type: SiteQuality
SIO_000300: -6.47e-1

QD
type: SiteQuality
SIO_000300: 9.17e0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1065
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50395
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2021
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 48
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5121
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.34796900680911e-4
allele num: 8518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64480
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.819505094614265e-4
allele num: 16488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.416e0

QD
type: SiteQuality
SIO_000300: 9.99e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

DP
type: SiteQuality
SIO_000300: 1.424346e6

VQSLOD
type: SiteQuality
SIO_000300: 6.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

FS
type: SiteQuality
SIO_000300: 4.223e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.2e-2

GenotypeDepth
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50464
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2025
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5120
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550724188195888e-5
allele num: 64486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.71e0

VQSLOD
type: SiteQuality
SIO_000300: -8.149999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.009e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.59e-1

FS
type: SiteQuality
SIO_000300: 1.602e0

MQ
type: SiteQuality
SIO_000300: 5.904e1

DP
type: SiteQuality
SIO_000300: 1.424213e6

MQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.265e0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 34703
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 142
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50358
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5103
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.149425287356322e-3
allele num: 870
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQ
type: SiteQuality
SIO_000300: 5.917e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.792e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

DP
type: SiteQuality
SIO_000300: 1.422842e6

QD
type: SiteQuality
SIO_000300: 9.539999999999999e0

GenotypeDepth
all individuals: 19397
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50223
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2121
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 90
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5090
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.106072371486256e-5
allele num: 64390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9272
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 4.162e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

QD
type: SiteQuality
SIO_000300: 9.17e0

DP
type: SiteQuality
SIO_000300: 1.421207e6

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5080
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2138
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50184
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.175364362952515e-4
allele num: 8508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64354
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

DP
type: SiteQuality
SIO_000300: 1.420768e6

MQRankSum
type: SiteQuality
SIO_000300: 7.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.803e-1

QD
type: SiteQuality
SIO_000300: 8.279999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2369
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 9.75e1
variant carriers: 27

GenotypeQuality
all individuals: 63
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4988
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49597
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64038
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9178
num of homozygotes: 0

South Asian
type: Population
allele count: 25
allele frequency: 1.518833535844471e-3
allele num: 16460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.743679163034002e-4
allele num: 11470
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.41306e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.735e0

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

FS
type: SiteQuality
SIO_000300: 1.276e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.196e1

MQRankSum
type: SiteQuality
SIO_000300: -5.9e-2

GenotypeDepth
all individuals: 11
bin: 6.75e1
variant carriers: 9

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49634
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4970
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2419
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 9.75e1
variant carriers: 82

GenotypeQuality
all individuals: 135
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.562011871290222e-5
allele num: 64020
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9164
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 83
allele frequency: 5.042527339003645e-3
allele num: 16460
num of homozygotes: 2

DP
type: SiteQuality
SIO_000300: 1.413571e6

FS
type: SiteQuality
SIO_000300: 6.09e-1

QD
type: SiteQuality
SIO_000300: 1.378e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.93e0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 44
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2542
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49316
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4946
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9086
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.131850923896023e-5
allele num: 63860
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.422e0

QD
type: SiteQuality
SIO_000300: 9.449999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.0096e1

MQRankSum
type: SiteQuality
SIO_000300: 1.7e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.405838e6

GenotypeDepth
all individuals: 152
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 88
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2665
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48853
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4869
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9014
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.57267322995628e-5
allele num: 63586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.14e0

QD
type: SiteQuality
SIO_000300: 1.333e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.58e-1

DP
type: SiteQuality
SIO_000300: 1.399936e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4767
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3013
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48126
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 120
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6336
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.837109614206981e-4
allele num: 16330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.347e1

DP
type: SiteQuality
SIO_000300: 1.392797e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.993e0

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.87e-1

GenotypeDepth
all individuals: 32466
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3465
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4652
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47110
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 6.15839389087326e-5
allele num: 16238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.81e1

DP
type: SiteQuality
SIO_000300: 1.377794e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.345e0

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4550
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4179
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46018
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6228
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62492
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.197891710589363e-4
allele num: 8348
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: 1.89e0

VQSLOD
type: SiteQuality
SIO_000300: -2.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.28e-1

QD
type: SiteQuality
SIO_000300: 1.855e1

DP
type: SiteQuality
SIO_000300: 1.361859e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4480
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4386
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 45732
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 761
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62310
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6222
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 8.031206975676916e-4
allele num: 8716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

FS
type: SiteQuality
SIO_000300: 1.2506e1

VQSLOD
type: SiteQuality
SIO_000300: -7.069e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.356661e6

QD
type: SiteQuality
SIO_000300: 1.196e1

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44284
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1019
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4326
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4812
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 185
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.129068679634827e-4
allele num: 61998
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.345834e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.33e-1

FS
type: SiteQuality
SIO_000300: 3.218e0

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

QD
type: SiteQuality
SIO_000300: 1.436e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.13e-1

GenotypeDepth
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42341
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1069
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4086
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1200
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5838
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 786
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.626069140459853e-5
allele num: 61498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11162
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 1.320386e6

MQRankSum
type: SiteQuality
SIO_000300: 9.45e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.367e0

QD
type: SiteQuality
SIO_000300: 1.081e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.802e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

MQ
type: SiteQuality
SIO_000300: 5.861e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.079e0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1131
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1416
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4010
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6643
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 401
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41663
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6110
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15760
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8178
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.183992422448496e-4
allele num: 8446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.39e-1

FS
type: SiteQuality
SIO_000300: 4.536e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
type: SiteQuality
SIO_000300: 1.304243e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.82e-1

QD
type: SiteQuality
SIO_000300: 1.169e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.023e0

GenotypeDepth
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41034
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1537
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6964
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1162
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3976
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61028
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6096
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8144
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11054
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

QD
type: SiteQuality
SIO_000300: 3.035e1

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

DP
type: SiteQuality
SIO_000300: 1.297416e6

VQSLOD
type: SiteQuality
SIO_000300: -3.239e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1043
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7470
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3836
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39446
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 149
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8082
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6056
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.648043772042586e-5
allele num: 60678
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11012
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.264e1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.291e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.283568e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.811e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.61e-1

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3307
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13109
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 238
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28689
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2571
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3569
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2793
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7982
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7726
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.612007405448295e-5
allele num: 15124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.28e-1

FS
type: SiteQuality
SIO_000300: 4.771e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.15e-1

DP
type: SiteQuality
SIO_000300: 1.164169e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.468e0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20258
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14484
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6919
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.421e0

QD
type: SiteQuality
SIO_000300: 1.207e1

FS
type: SiteQuality
SIO_000300: 6.04e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

DP
type: SiteQuality
SIO_000300: 2.72304e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.862e0

MQRankSum
type: SiteQuality
SIO_000300: 5.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

GenotypeDepth
all individuals: 1891
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23546
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1726
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1122
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2377
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 15470
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4281
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2930
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4330
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7566
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.279099513942185e-4
allele num: 7818
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5768
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.25e-1

DP
type: SiteQuality
SIO_000300: 1.11293e6

MQ
type: SiteQuality
SIO_000300: 6.039e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.55e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

VQSLOD
type: SiteQuality
SIO_000300: -1.891e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

QD
type: SiteQuality
SIO_000300: 2.039e1

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5000
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4975
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1923
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3216
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1235
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 281
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19621
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16906
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1394
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5662
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.76186616864583e-5
allele num: 56758
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.075413e6

QD
type: SiteQuality
SIO_000300: 2.86e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.031e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

VQSLOD
type: SiteQuality
SIO_000300: -3.542e0

MQRankSum
type: SiteQuality
SIO_000300: -6.1e-2

MQ
type: SiteQuality
SIO_000300: 5.883e1

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4778
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5399
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1639
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3845
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2563
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17743
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11761
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5332
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 819
bin: 5.25e1
variant carriers: 1

East Asian
type: Population
allele count: 4
allele frequency: 6.686726847208291e-4
allele num: 5982
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6154
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4916
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8056
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46866
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.471704506946798e-5
allele num: 11804
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.060361e6

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.92e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.5e-1

FS
type: SiteQuality
SIO_000300: 3.846e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

QD
type: SiteQuality
SIO_000300: 2.01e0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11761
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4778
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1639
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5399
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3845
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 17743
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2563
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5332
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.241310824230387e-4
allele num: 8056
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11804
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46866
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 3.846e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.92e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

QD
type: SiteQuality
SIO_000300: 2.01e0

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.060361e6

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2563
bin: 3.75e1
variant carriers: 33

GenotypeQuality
all individuals: 11761
bin: 6.25e1
variant carriers: 107

GenotypeQuality
all individuals: 60
bin: 8.25e1
variant carriers: 40

GenotypeQuality
all individuals: 1639
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 17743
bin: 2.25e1
variant carriers: 6

GenotypeQuality
all individuals: 819
bin: 5.25e1
variant carriers: 87

GenotypeQuality
all individuals: 1270
bin: 4.25e1
variant carriers: 39

GenotypeQuality
all individuals: 235
bin: 7.25e1
variant carriers: 40

GenotypeQuality
all individuals: 39
bin: 8.75e1
variant carriers: 23

GenotypeQuality
all individuals: 5399
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 1032
bin: 4.75e1
variant carriers: 69

GenotypeQuality
all individuals: 3845
bin: 7.5e0
variant carriers: 6

GenotypeQuality
all individuals: 4778
bin: 3.25e1
variant carriers: 26

GenotypeQuality
all individuals: 96
bin: 9.75e1
variant carriers: 60

GenotypeQuality
all individuals: 33
bin: 9.25e1
variant carriers: 24

GenotypeQuality
all individuals: 581
bin: 5.75e1
variant carriers: 85

GenotypeQuality
all individuals: 5332
bin: 2.75e1
variant carriers: 7

GenotypeQuality
all individuals: 141
bin: 7.75e1
variant carriers: 48

GenotypeQuality
all individuals: 1243
bin: 6.75e1
variant carriers: 78

GenotypeQuality
all individuals: 1563
bin: 1.75e1
variant carriers: 13

African
type: Population
allele count: 56
allele frequency: 9.099772505687357e-3
allele num: 6154
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 9.433962264150943e-3
allele num: 636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 404
allele frequency: 8.620321768446208e-3
allele num: 46866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 39
allele frequency: 7.933279088689993e-3
allele num: 4916
num of homozygotes: 0

East Asian
type: Population
allele count: 57
allele frequency: 9.528585757271816e-3
allele num: 5982
num of homozygotes: 0

South Asian
type: Population
allele count: 112
allele frequency: 9.488309047780414e-3
allele num: 11804
num of homozygotes: 0

Latino
type: Population
allele count: 87
allele frequency: 1.079940417080437e-2
allele num: 8056
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.846e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.92e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.060361e6

QD
type: SiteQuality
SIO_000300: 2.01e0

GenotypeDepth
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6089
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6150
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2639
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 266
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1585
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2554
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22774
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14518
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6866
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.22485e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.4e0

VQSLOD
type: SiteQuality
SIO_000300: 4.3e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.29e-1

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23031
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2910
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1450
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6435
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6499
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2754
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12974
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 22
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53006
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9346
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.927829014785536e-4
allele num: 13662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6800
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.388e0

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

DP
type: SiteQuality
SIO_000300: 9.01296e5

QD
type: SiteQuality
SIO_000300: 1.2e1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.59e-1

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23121
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6904
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11549
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2987
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6664
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3159
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 346
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7024
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.900996121967911e-5
allele num: 52604
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.671e0

MQRankSum
type: SiteQuality
SIO_000300: -1.292e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.6e-2

DP
type: SiteQuality
SIO_000300: 8.82937e5

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.200000000000001e-3

MQ
type: SiteQuality
SIO_000300: 6.051e1

QD
type: SiteQuality
SIO_000300: 1.589e1

VQSLOD
type: SiteQuality
SIO_000300: 4.15e0

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 727
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4854
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2062
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2071
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4710
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7148
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20977
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8301
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1511
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12052
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.549907005579665e-4
allele num: 6452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48086
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5004
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8140
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

MQRankSum
type: SiteQuality
SIO_000300: 8.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.34e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.884e0

DP
type: SiteQuality
SIO_000300: 7.85658e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.855e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.157e0

QD
type: SiteQuality
SIO_000300: 3.0e0

GenotypeDepth
all individuals: 4186
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1341
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4926
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7224
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21457
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4606
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4460
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1943
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1776
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1507
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8434
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5062
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.050020500205002e-5
allele num: 48780
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12282
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8272
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.082e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.13e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

DP
type: SiteQuality
SIO_000300: 7.83581e5

QD
type: SiteQuality
SIO_000300: 4.69e0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8134
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5231
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4910
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3326
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1889
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6423
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2342
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17216
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5122
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1013
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1977
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7248
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.279046446966589e-5
allele num: 43878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4672
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.72e-1

DP
type: SiteQuality
SIO_000300: 7.50668e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.64e-2

FS
type: SiteQuality
SIO_000300: 3.31e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

QD
type: SiteQuality
SIO_000300: 1.227e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.42e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.45e-1

DP
type: SiteQuality
SIO_000300: 1.23161e5

ClippingRankSum
type: SiteQuality
SIO_000300: 8.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.001e0

VQSLOD
type: SiteQuality
SIO_000300: -3.781e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.79e-1

QD
type: SiteQuality
SIO_000300: 1.158e1

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.08695652173913e-2
allele num: 92
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.744990392533626e-4
allele num: 7286
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-2

QD
type: SiteQuality
SIO_000300: 1.323e1

DP
type: SiteQuality
SIO_000300: 1.26138e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.749e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.99e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7312
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.734e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.06e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.225e0

QD
type: SiteQuality
SIO_000300: 7.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.72e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.29604e5

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQRankSum
type: SiteQuality
SIO_000300: -2.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.421e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.526e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.99e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.987e0

DP
type: SiteQuality
SIO_000300: 1.3903e5

QD
type: SiteQuality
SIO_000300: 1.175e1

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

FS
type: SiteQuality
SIO_000300: 8.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.29e-1

DP
type: SiteQuality
SIO_000300: 1.3972e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.34e-2

MQ
type: SiteQuality
SIO_000300: 5.93e1

MQRankSum
type: SiteQuality
SIO_000300: 1.76e0

QD
type: SiteQuality
SIO_000300: 1.097e1

VQSLOD
type: SiteQuality
SIO_000300: -8.813e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.62e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.21e-1

QD
type: SiteQuality
SIO_000300: 1.025e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.29e-2

FS
type: SiteQuality
SIO_000300: 9.039999999999999e0

DP
type: SiteQuality
SIO_000300: 1.39907e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.26e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.24e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.332622601279318e-4
allele num: 7504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.42e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.345e0

DP
type: SiteQuality
SIO_000300: 1.40097e5

FS
type: SiteQuality
SIO_000300: 4.372e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.976e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

VQSLOD
type: SiteQuality
SIO_000300: -5.448e-1

QD
type: SiteQuality
SIO_000300: 1.008e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.99e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2724
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.665245202558635e-4
allele num: 7504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.1123e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.153e0

DP
type: SiteQuality
SIO_000300: 1.40277e5

MQ
type: SiteQuality
SIO_000300: 5.921e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.52e-2

QD
type: SiteQuality
SIO_000300: 1.183e1

MQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.861e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2710
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.822e0

VQSLOD
type: SiteQuality
SIO_000300: -1.552e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-2

FS
type: SiteQuality
SIO_000300: 2.822e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.28e-1

DP
type: SiteQuality
SIO_000300: 1.40093e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.52e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.245e0

QD
type: SiteQuality
SIO_000300: 9.380000000000001e0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.720238095238095e-4
allele num: 2688
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.55e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.87e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.39174e5

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-3

QD
type: SiteQuality
SIO_000300: 1.119e1

VQSLOD
type: SiteQuality
SIO_000300: -1.596e-1

South Asian
type: Population
allele count: 1
allele frequency: 1.344447432105405e-4
allele num: 7438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.63e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.75e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e0

VQSLOD
type: SiteQuality
SIO_000300: -1.076e0

QD
type: SiteQuality
SIO_000300: 1.021e1

DP
type: SiteQuality
SIO_000300: 1.29629e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 1.29506e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.938e0

VQSLOD
type: SiteQuality
SIO_000300: -8.431e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.82e-2

QD
type: SiteQuality
SIO_000300: 1.11e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11072
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10656
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.22e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.342062e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.3e0

QD
type: SiteQuality
SIO_000300: 1.371e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.17e-1

Other
type: Population
allele count: 1
allele frequency: 1.333333333333333e-3
allele num: 750
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7660
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55024
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.2232e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.225e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQRankSum
type: SiteQuality
SIO_000300: -2.32e-1

DP
type: SiteQuality
SIO_000300: 1.292438e6

QD
type: SiteQuality
SIO_000300: 1.72e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.05e-1

QD
type: SiteQuality
SIO_000300: 1.261e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

MQ
type: SiteQuality
SIO_000300: 5.982e1

VQSLOD
type: SiteQuality
SIO_000300: 7.17e-1

DP
type: SiteQuality
SIO_000300: 1.260706e6

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50716
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.393922497909116e-4
allele num: 7174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.24e-1

DP
type: SiteQuality
SIO_000300: 1.154104e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: 4.4e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.031e0

QD
type: SiteQuality
SIO_000300: 1.354e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.451e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9122
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.128e0

DP
type: SiteQuality
SIO_000300: 1.138448e6

QD
type: SiteQuality
SIO_000300: 1.085e1

VQSLOD
type: SiteQuality
SIO_000300: 6.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1