4-122602958-AAAAAGAAAGTTATT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122602958
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122602944
    reference: chr 4
allele count: 1
allele frequency: 8.383072899201931e-6
allele num: 119288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5963
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6280
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7371
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2796
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3698
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16736
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2878
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3059
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: AAAAAGAAAGTTATT
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

4-122604469-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604469
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604469
    reference: chr 4
allele count: 1
allele frequency: 8.98876404494382e-6
allele num: 111250
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.303+50G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2974G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.123+50G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.424+50G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.689+50G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*100+50G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.376+50G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.468+50G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.303+50G>A
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13806
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12805
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2278
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genotype quality: GenotypeQuality
  all individuals: 5739
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15439
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5702
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD

4-122604479-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604479
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604479
    reference: chr 4
allele count: 2
allele frequency: 1.785841845846132e-5
allele num: 111992
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.424+40G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*100+40G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.303+40G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.303+40G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.376+40G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.689+40G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.468+40G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2964G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.123+40G>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
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genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10704
  bin: 1.25e1
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genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25340
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2458
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3159
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum

4-122604484-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604484
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604484
    reference: chr 4
allele count: 1
allele frequency: 8.84016973125884e-6
allele num: 113120
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.468+35A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.303+35A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*100+35A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.689+35A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.424+35A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.123+35A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.376+35A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2959A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.303+35A>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3217
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3483
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

4-122604491-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604491
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604491
    reference: chr 4
allele count: 1
allele frequency: 8.646480017984679e-6
allele num: 115654
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.689+28C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.303+28C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.424+28C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.123+28C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.376+28C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*100+28C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.468+28C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.303+28C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2952C>T
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36513
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

4-122604496-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604496
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604496
    reference: chr 4
allele count: 8450
allele frequency: 7.181710011898691e-2
allele num: 117660
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.424+23A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.468+23A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.303+23A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.376+23A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.123+23A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.689+23A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2947A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.303+23A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*100+23A>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34126
  bin: 2.25e1
  variant carriers: 878
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 4.25e1
  variant carriers: 813
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 3.25e1
  variant carriers: 1228
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 7.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 3.75e1
  variant carriers: 1060
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 5.75e1
  variant carriers: 206
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 1.75e1
  variant carriers: 391
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 1.25e1
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 10429
  bin: 2.75e1
  variant carriers: 1248
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 5.25e1
  variant carriers: 346
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 9.75e1
  variant carriers: 593
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 4.75e1
  variant carriers: 562
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 145
genotype quality: GenotypeQuality
  all individuals: 3120
  bin: 6.75e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 3.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 1
num of homozygotes: 516
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/4-122604499-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604499
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604499
    reference: chr 4
allele count: 1
allele frequency: 8.441810599537389e-6
allele num: 118458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.376+20G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.123+20G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2944G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.303+20G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*100+20G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.424+20G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.689+20G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.468+20G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.303+20G>T
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ

4-122604525-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604525
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604525
    reference: chr 4
allele count: 1
allele frequency: 8.27348843366317e-6
allele num: 120868
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.297C>G
  hgvsp: ENST00000296511.5:c.297C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*94C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.683C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.297C>G
  hgvsp: ENST00000506395.1:c.297C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.462C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2918C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.418C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.117C>G
  hgvsp: ENST00000501272.2:c.117C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.370C>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14758
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala99Ala
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

4-122604526-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604526
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604526
    reference: chr 4
allele count: 2
allele frequency: 1.654259718775848e-5
allele num: 120900
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.461C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.682C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2917C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.369C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.296C>T
  hgvsp: ENSP00000421421.1:p.Ala99Val
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.116C>T
  hgvsp: ENSP00000424106.1:p.Ala39Val
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*93C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.417C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.296C>T
  hgvsp: ENSP00000296511.5:p.Ala99Val
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala99Val
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum

4-122604527-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604527
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604527
    reference: chr 4
allele count: 1
allele frequency: 8.270888127967181e-6
allele num: 120906
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.295G>C
  hgvsp: ENSP00000296511.5:p.Ala99Pro
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.115G>C
  hgvsp: ENSP00000424106.1:p.Ala39Pro
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.681G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*92G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.295G>C
  hgvsp: ENSP00000421421.1:p.Ala99Pro
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.460G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.416G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2916G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.368G>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3940
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala99Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

4-122604535-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604535
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604535
    reference: chr 4
allele count: 1
allele frequency: 8.26255081468751e-6
allele num: 121028
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.107T>C
  hgvsp: ENSP00000424106.1:p.Leu36Pro
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.287T>C
  hgvsp: ENSP00000296511.5:p.Leu96Pro
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.408T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.452T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.673T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.287T>C
  hgvsp: ENSP00000421421.1:p.Leu96Pro
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*84T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2908T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.360T>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36608
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49183
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4291
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu96Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

4-122604550-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604550
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604550
    reference: chr 4
allele count: 1
allele frequency: 8.256683785524381e-6
allele num: 121114
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.658A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.272A>G
  hgvsp: ENSP00000421421.1:p.Tyr91Cys
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.92A>G
  hgvsp: ENSP00000424106.1:p.Tyr31Cys
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*69A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.393A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.437A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.345A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2893A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.272A>G
  hgvsp: ENSP00000296511.5:p.Tyr91Cys
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49258
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Tyr91Cys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-122604556-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604556
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604556
    reference: chr 4
allele count: 6
allele frequency: 4.95319233245827e-5
allele num: 121134
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.266G>A
  hgvsp: ENSP00000421421.1:p.Arg89Gln
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.86G>A
  hgvsp: ENSP00000424106.1:p.Arg29Gln
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.266G>A
  hgvsp: ENSP00000296511.5:p.Arg89Gln
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.339G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*63G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2887G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.387G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.431G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.652G>A
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15012
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg89Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum

4-122604557-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604557
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604557
    reference: chr 4
allele count: 7
allele frequency: 5.778724387867981e-5
allele num: 121134
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.651C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.265C>T
  hgvsp: ENSP00000421421.1:p.Arg89Trp
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2886C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.338C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.85C>T
  hgvsp: ENSP00000424106.1:p.Arg29Trp
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.265C>T
  hgvsp: ENSP00000296511.5:p.Arg89Trp
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*62C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.430C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.386C>T
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36560
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg89Trp
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

4-122604560-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604560
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604559
    reference: chr 4
allele count: 1
allele frequency: 8.254639107178234e-6
allele num: 121144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.382delC
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.261delC
  hgvsp: ENSP00000421421.1:p.Ser88LeufsTer9
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.81delC
  hgvsp: ENSP00000424106.1:p.Ser28LeufsTer9
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.647delC
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2882delC
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.426delC
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*58delC
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.334delC
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.261delC
  hgvsp: ENSP00000296511.5:p.Ser88LeufsTer9
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser88LeufsTer9
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: AG
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

4-122604561-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604561
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604561
    reference: chr 4
allele count: 1
allele frequency: 8.255047961828658e-6
allele num: 121138
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2882C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.647C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.334C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.81C>T
  hgvsp: ENST00000501272.2:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.382C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.261C>T
  hgvsp: ENST00000296511.5:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.261C>T
  hgvsp: ENST00000506395.1:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*58C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.426C>T
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro87Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum

4-122604562-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604562
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604562
    reference: chr 4
allele count: 9
allele frequency: 7.429543165645793e-5
allele num: 121138
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.381C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.260C>G
  hgvsp: ENSP00000421421.1:p.Pro87Arg
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.425C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*57C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.260C>G
  hgvsp: ENSP00000296511.5:p.Pro87Arg
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.80C>G
  hgvsp: ENSP00000424106.1:p.Pro27Arg
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2881C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.333C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.646C>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro87Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/4-122604578-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604578
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604578
    reference: chr 4
allele count: 1
allele frequency: 8.256002113536541e-6
allele num: 121124
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.365G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.317G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.630G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*41G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.244G>T
  hgvsp: ENSP00000296511.5:p.Val82Leu
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.409G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.64G>T
  hgvsp: ENSP00000424106.1:p.Val22Leu
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.244G>T
  hgvsp: ENSP00000421421.1:p.Val82Leu
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2865G>T
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val82Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD

4-122604578-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604578
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604578
    reference: chr 4
allele count: 1
allele frequency: 8.256002113536541e-6
allele num: 121124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2865G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.244G>A
  hgvsp: ENSP00000421421.1:p.Val82Met
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.630G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.64G>A
  hgvsp: ENSP00000424106.1:p.Val22Met
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.409G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.317G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.365G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.244G>A
  hgvsp: ENSP00000296511.5:p.Val82Met
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*41G>A
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3935
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49264
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val82Met
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

4-122604580-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604580
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604580
    reference: chr 4
allele count: 276
allele frequency: 2.278769464489176e-3
allele num: 121118
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.407T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.242T>C
  hgvsp: ENSP00000421421.1:p.Ile81Thr
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.62T>C
  hgvsp: ENSP00000424106.1:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*39T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.363T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2863T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.628T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.242T>C
  hgvsp: ENSP00000296511.5:p.Ile81Thr
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.315T>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 15003
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 36331
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 9.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile81Thr
num of homozygotes: 2
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

4-122604581-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604581
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604581
    reference: chr 4
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2862A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.241A>C
  hgvsp: ENSP00000296511.5:p.Ile81Leu
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.241A>C
  hgvsp: ENSP00000421421.1:p.Ile81Leu
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.61A>C
  hgvsp: ENSP00000424106.1:p.Ile21Leu
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.627A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.362A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*38A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.314A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.406A>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4293
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ile81Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

4-122604592-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604592
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604592
    reference: chr 4
allele count: 1
allele frequency: 8.261595148791329e-6
allele num: 121042
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*27T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.395T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.50T>C
  hgvsp: ENSP00000424106.1:p.Phe17Ser
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.230T>C
  hgvsp: ENSP00000296511.5:p.Phe77Ser
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.303T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.351T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.230T>C
  hgvsp: ENSP00000421421.1:p.Phe77Ser
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.616T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2851T>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3906
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe77Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

4-122604609-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604609
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604609
    reference: chr 4
allele count: 1
allele frequency: 8.280750567231414e-6
allele num: 120762
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.334A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.213A>C
  hgvsp: ENST00000506395.1:c.213A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.378A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.213A>C
  hgvsp: ENST00000296511.5:c.213A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2834A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.*10A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.33A>C
  hgvsp: ENST00000501272.2:c.33A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.286A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.599A>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser71Ser
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/4-122604624-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604624
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604624
    reference: chr 4
allele count: 1
allele frequency: 8.329723786359244e-6
allele num: 120052
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.584G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.363G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.198G>T
  hgvsp: ENST00000296511.5:c.198G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.103G>T
  hgvsp: ENSP00000427135.1:p.Gly35Ter
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.18G>T
  hgvsp: ENST00000501272.2:c.18G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.198G>T
  hgvsp: ENST00000506395.1:c.198G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2819G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.319G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.271G>T
  variant of: http://identifiers.org/hgnc/543
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly35Ter
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP

4-122604629-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604629
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604629
    reference: chr 4
allele count: 3
allele frequency: 2.508151492350138e-5
allele num: 119610
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2814C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.314C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.13C>G
  hgvsp: ENSP00000424106.1:p.Leu5Val
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.579C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.193C>G
  hgvsp: ENSP00000421421.1:p.Leu65Val
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.266C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.98C>G
  hgvsp: ENSP00000427135.1:p.Ser33Cys
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.193C>G
  hgvsp: ENSP00000296511.5:p.Leu65Val
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.358C>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14926
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3905
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4060
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47429
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu65Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

4-122604631-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604631
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604631
    reference: chr 4
allele count: 1
allele frequency: 8.377594960038872e-6
allele num: 119366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.264A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2812A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.191A>G
  hgvsp: ENSP00000296511.5:p.Asp64Gly
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.356A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.191A>G
  hgvsp: ENSP00000421421.1:p.Asp64Gly
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.96A>G
  hgvsp: ENST00000513728.1:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.11A>G
  hgvsp: ENSP00000424106.1:p.Asp4Gly
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.577A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.312A>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp64Gly
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD

4-122604637-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604637
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604637
    reference: chr 4
allele count: 2
allele frequency: 1.691160305085319e-5
allele num: 118262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.576-5G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-5G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.355-5G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2806G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.190-5G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.190-5G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-5G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-5G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.311-5G>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14632
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3904
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3153
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
hgvs: c.190-5G>C
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/4-122604652-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604652
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604652
    reference: chr 4
allele count: 1
allele frequency: 8.685531641391769e-6
allele num: 115134
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2791T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.190-20T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-20T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-20T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.355-20T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-20T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.576-20T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.311-20T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.190-20T>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12664
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1939
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS

4-122604661-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604661
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604661
    reference: chr 4
allele count: 1
allele frequency: 8.824411852950001e-6
allele num: 113322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.190-29T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.355-29T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-29T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2782T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.311-29T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.190-29T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-29T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-29T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.576-29T>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16714
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23974
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-122604661-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604661
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604660
    reference: chr 4
allele count: 2
allele frequency: 1.76488237059e-5
allele num: 113322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.355-30delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2781delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-30delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.576-30delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-30delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.311-30delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.190-30delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.190-30delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-30delG
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16714
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: AC
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

4-122604666-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604666
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604666
    reference: chr 4
allele count: 13
allele frequency: 1.159430630373515e-4
allele num: 112124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.576-34G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-34G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.311-34G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2777G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-34G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.355-34G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.190-34G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-34G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.190-34G>A
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11310
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12861
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 16834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12728
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2221
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ

4-122604677-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122604677
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122604677
    reference: chr 4
allele count: 1
allele frequency: 9.193711501333089e-6
allele num: 108770
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-45T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-45T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.355-45T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.576-45T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.190-45T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-45T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.190-45T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+2766T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.311-45T>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10391
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17171
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8980
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3514
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP

4-122605781-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605781
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605781
    reference: chr 4
allele count: 3
allele frequency: 2.491363273983524e-5
allele num: 120416
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.189+51T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1149T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.189+51T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1662T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1149T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1149T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.310+51T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.575+51T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.354+51T>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7891
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4024
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9764
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25491
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4260
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4362
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

4-122605792-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605792
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605792
    reference: chr 4
allele count: 1
allele frequency: 8.300959590928711e-6
allele num: 120468
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.354+40G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1160G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.575+40G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.189+40G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1651G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1160G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1160G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.189+40G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.310+40G>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4232
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4334
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-122605805-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605805
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605805
    reference: chr 4
allele count: 1
allele frequency: 8.284043275842073e-6
allele num: 120714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.310+27G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1638G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1173G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.189+27G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.354+27G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.575+27G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.189+27G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1173G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1173G>A
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4338
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ

4-122605806-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605806
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605805
    reference: chr 4
allele count: 1
allele frequency: 8.279790686891435e-6
allele num: 120776
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1175delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1175delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.354+25delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.310+25delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.575+25delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1636delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.189+25delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1175delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.189+25delG
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4018
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25488
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3941
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: TC
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

4-122605807-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605807
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605807
    reference: chr 4
allele count: 1
allele frequency: 8.280750567231414e-6
allele num: 120762
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1175G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1175G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1636G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.189+25G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.189+25G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1175G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.354+25G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.310+25G>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.575+25G>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8169
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4234
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

4-122605814-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605814
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605814
    reference: chr 4
allele count: 1
allele frequency: 8.271161767381846e-6
allele num: 120902
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.575+18C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.310+18C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.189+18C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.189+18C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1182C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.354+18C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1182C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1182C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1629C>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7887
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4947
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2320
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

4-122605816-TGAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605816
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605813
    reference: chr 4
allele count: 1
allele frequency: 8.269656974628692e-6
allele num: 120924
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.310+13_310+15delTTC
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.189+13_189+15delTTC
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1624_94+1626delTTC
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.189+13_189+15delTTC
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.354+13_354+15delTTC
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1187_10-1185delTTC
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.575+13_575+15delTTC
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1187_263-1185delTTC
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1187_95-1185delTTC
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4233
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: TGAA
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

4-122605817-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605817
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605817
    reference: chr 4
allele count: 1
allele frequency: 8.268836409340477e-6
allele num: 120936
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1626C>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1185C>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.310+15C>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.189+15C>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1185C>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.575+15C>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1185C>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.354+15C>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.189+15C>A
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9907
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3943
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/4-122605819-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605819
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605819
    reference: chr 4
allele count: 1
allele frequency: 8.266375690242371e-6
allele num: 120972
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1624T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1187T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.575+13T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.354+13T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1187T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1187T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.189+13T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.310+13T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.189+13T>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8420
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3943
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

4-122605824-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605824
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605824
    reference: chr 4
allele count: 1
allele frequency: 8.259275166011431e-6
allele num: 121076
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.189+8C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1619C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1192C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1192C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.354+8C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.189+8C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.310+8C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1192C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.575+8C>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9926
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7887
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4332
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12195
  bin: 6.25e1
  variant carriers: 0
hgvs: c.189+8C>G
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

4-122605841-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605841
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605841
    reference: chr 4
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.301G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.345G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.180G>A
  hgvsp: ENST00000506395.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.566G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1602G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1209G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1209G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.180G>A
  hgvsp: ENST00000296511.5:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1209G>A
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7889
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25486
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2318
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu60Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

4-122605841-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605841
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605839
    reference: chr 4
allele count: 3
allele frequency: 2.473777953690877e-5
allele num: 121272
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.564_565delCT
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1600_94+1601delCT
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1211_10-1210delCT
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.343_344delCT
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.178_179delCT
  hgvsp: ENSP00000296511.5:p.Leu60ValfsTer8
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1211_263-1210delCT
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.178_179delCT
  hgvsp: ENSP00000421421.1:p.Leu60ValfsTer8
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.299_300delCT
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1211_95-1210delCT
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7889
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2605
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu60ValfsTer8
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: CAG
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD

4-122605846-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605846
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605846
    reference: chr 4
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1214A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.561A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1597A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.296A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1214A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.175A>G
  hgvsp: ENSP00000421421.1:p.Thr59Ala
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.340A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.175A>G
  hgvsp: ENSP00000296511.5:p.Thr59Ala
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1214A>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4339
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2317
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr59Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP

4-122605846-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605846
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605846
    reference: chr 4
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1597A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.296A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.340A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.175A>C
  hgvsp: ENSP00000421421.1:p.Thr59Pro
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1214A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.561A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.175A>C
  hgvsp: ENSP00000296511.5:p.Thr59Pro
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1214A>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1214A>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3942
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr59Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

4-122605861-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605861
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605861
    reference: chr 4
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1229T>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1229T>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.546T>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.281T>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.160T>A
  hgvsp: ENSP00000296511.5:p.Ser54Thr
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.325T>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.160T>A
  hgvsp: ENSP00000421421.1:p.Ser54Thr
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1582T>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1229T>A
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9983
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25482
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser54Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum

4-122605871-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605871
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605871
    reference: chr 4
allele count: 2
allele frequency: 1.648070932972955e-5
allele num: 121354
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.150C>T
  hgvsp: ENST00000296511.5:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1572C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1239C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.150C>T
  hgvsp: ENST00000506395.1:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.315C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1239C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.536C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.271C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1239C>T
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9986
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2604
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg50Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum

4-122605873-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605873
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605873
    reference: chr 4
allele count: 6
allele frequency: 4.944212798918866e-5
allele num: 121354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.148C>T
  hgvsp: ENSP00000421421.1:p.Arg50Cys
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1241C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1570C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.313C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.148C>T
  hgvsp: ENSP00000296511.5:p.Arg50Cys
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1241C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1241C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.269C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.534C>T
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7885
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4334
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg50Cys
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

4-122605875-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605875
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605875
    reference: chr 4
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.146A>G
  hgvsp: ENSP00000296511.5:p.Gln49Arg
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.311A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.532A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1568A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.146A>G
  hgvsp: ENSP00000421421.1:p.Gln49Arg
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.267A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1243A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1243A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1243A>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7885
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5011
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12720
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4237
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln49Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/4-122605879-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605879
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605879
    reference: chr 4
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1247G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.528G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.263G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.307G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.142G>T
  hgvsp: ENSP00000421421.1:p.Ala48Ser
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.142G>T
  hgvsp: ENSP00000296511.5:p.Ala48Ser
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1247G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1564G>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1247G>T
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3942
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25477
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala48Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

4-122605888-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605888
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605888
    reference: chr 4
allele count: 6
allele frequency: 4.944294284395807e-5
allele num: 121352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.254C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.519C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.133C>T
  hgvsp: ENSP00000296511.5:p.Arg45Ter
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.298C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.133C>T
  hgvsp: ENSP00000421421.1:p.Arg45Ter
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1555C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1256C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1256C>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1256C>T
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5773
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg45Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

4-122605897-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605897
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605897
    reference: chr 4
allele count: 4
allele frequency: 3.296359171295305e-5
allele num: 121346
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.124T>C
  hgvsp: ENST00000296511.5:c.124T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.289T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.510T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1265T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.124T>C
  hgvsp: ENST00000506395.1:c.124T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1546T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1265T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.245T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1265T>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7887
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5773
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5009
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2317
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu42Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ

4-122605898-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605898
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605898
    reference: chr 4
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.123G>A
  hgvsp: ENST00000296511.5:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.244G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1266G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.288G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1266G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.509G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1266G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.123G>A
  hgvsp: ENST00000506395.1:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1545G>A
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7885
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2607
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu41Leu
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-122605898-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605898
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605896
    reference: chr 4
allele count: 7
allele frequency: 5.768533473975673e-5
allele num: 121348
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.507_508delCT
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.121_122delCT
  hgvsp: ENSP00000421421.1:p.Leu41ValfsTer6
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1268_263-1267delCT
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.286_287delCT
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.121_122delCT
  hgvsp: ENSP00000296511.5:p.Leu41ValfsTer6
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1268_10-1267delCT
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.242_243delCT
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1268_95-1267delCT
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1543_94+1544delCT
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7885
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3942
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu41ValfsTer6
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: CAG
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

4-122605902-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605902
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605902
    reference: chr 4
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1270C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1541C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.240C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.284C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.119C>G
  hgvsp: ENSP00000296511.5:p.Thr40Ser
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.119C>G
  hgvsp: ENSP00000421421.1:p.Thr40Ser
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1270C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1270C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.505C>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4018
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12706
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr40Ser
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

4-122605907-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605907
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605907
    reference: chr 4
allele count: 1
allele frequency: 8.241848811525402e-6
allele num: 121332
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.279C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1275C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1536C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1275C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.500C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.114C>G
  hgvsp: ENSP00000421421.1:p.Ile38Met
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.114C>G
  hgvsp: ENSP00000296511.5:p.Ile38Met
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1275C>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.235C>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4018
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2606
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4332
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12697
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile38Met
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP

4-122605928-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605928
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605928
    reference: chr 4
allele count: 2
allele frequency: 1.650900566258894e-5
allele num: 121146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1296A>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1296A>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.95-2A>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.481-2A>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.260-2A>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.95-2A>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1515A>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1296A>T
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.216-2A>T
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4018
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9973
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25463
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4231
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
hgvs: c.95-2A>T
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

4-122605930-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605930
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605930
    reference: chr 4
allele count: 1
allele frequency: 8.256683785524381e-6
allele num: 121114
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.260-4G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.95-4G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.216-4G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.95-4G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.481-4G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1513G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1298G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1298G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1298G>A
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4018
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7885
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12177
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2314
  bin: 8.75e1
  variant carriers: 0
hgvs: c.95-4G>A
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

4-122605941-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605941
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605941
    reference: chr 4
allele count: 1
allele frequency: 8.26541913940456e-6
allele num: 120986
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1309A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.481-15A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.260-15A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.95-15A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.216-15A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1309A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1309A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1502A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.95-15A>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4018
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7881
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11243
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4891
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

4-122605945-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605945
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605945
    reference: chr 4
allele count: 1
allele frequency: 8.268426187759421e-6
allele num: 120942
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1498T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.260-19T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1313T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.216-19T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.481-19T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1313T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1313T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.95-19T>C
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.95-19T>C
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7881
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4225
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4869
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP

4-122605955-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605955
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605955
    reference: chr 4
allele count: 2
allele frequency: 1.655355073663301e-5
allele num: 120820
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1323A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.95-29A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.216-29A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1488A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.95-29A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.481-29A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1323A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1323A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.260-29A>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9173
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7945
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7880
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5766
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3933
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum

4-122605962-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605962
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605962
    reference: chr 4
allele count: 1
allele frequency: 8.288162845823595e-6
allele num: 120654
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1481A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.481-36A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1330A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.260-36A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.95-36A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.216-36A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1330A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1330A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.95-36A>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9128
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7866
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4200
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-122605963-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605963
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605962
    reference: chr 4
allele count: 1
allele frequency: 8.288025460814215e-6
allele num: 120656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1332delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.216-38delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1332delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.481-38delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.95-38delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1332delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.95-38delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.260-38delG
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1479delG
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5766
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4200
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3922
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: AC
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

4-122605964-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605964
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605964
    reference: chr 4
allele count: 3
allele frequency: 2.489048187972919e-5
allele num: 120528
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.95-38G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1332G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.216-38G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.95-38G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1332G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.260-38G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1479G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.481-38G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1332G>A
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7267
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4493
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/4-122605965-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605965
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605965
    reference: chr 4
allele count: 2
allele frequency: 1.658292290599141e-5
allele num: 120606
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1333T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.481-39T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.95-39T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1333T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1333T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1478T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.260-39T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.216-39T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.95-39T>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2740
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9410
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9108
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8119
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3919
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

4-122605975-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605975
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605975
    reference: chr 4
allele count: 1
allele frequency: 8.311999202048076e-6
allele num: 120308
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1343A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.260-49A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.95-49A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1343A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1343A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.95-49A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1468A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.216-49A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.481-49A>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5756
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1286
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3927
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25417
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

4-122605977-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122605977
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122605977
    reference: chr 4
allele count: 2
allele frequency: 1.663561352142667e-5
allele num: 120224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-1345G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.95-51G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.260-51G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.263-1345G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.95-51G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.481-51G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.216-51G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+1466G>A
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.95-1345G>A
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7831
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8965
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5756
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25414
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

4-122607392-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122607392
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122607392
    reference: chr 4
allele count: 1
allele frequency: 8.500943604740126e-6
allele num: 117634
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.94+51A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.262+51A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-2760A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+51A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.94+51A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.480+51A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.94+51A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.215+51A>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.259+51A>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6515
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1882
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/4-122607398-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122607398
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 122607398
    reference: chr 4
allele count: 1
allele frequency: 8.486370888353305e-6
allele num: 117836
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000421421
  ensembl transcript: ENST00000506395
  gene symbol: ANXA5
  hgvsc: ENST00000506395.1:c.94+45T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000511552
  gene symbol: ANXA5
  hgvsc: ENST00000511552.1:n.480+45T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000296511
  ensembl transcript: ENST00000296511
  gene symbol: ANXA5
  hgvsc: ENST00000296511.5:c.94+45T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000427135
  ensembl transcript: ENST00000513728
  gene symbol: ANXA5
  hgvsc: ENST00000513728.1:c.94+45T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424106
  ensembl transcript: ENST00000501272
  gene symbol: ANXA5
  hgvsc: ENST00000501272.2:c.10-2766T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513523
  gene symbol: ANXA5
  hgvsc: ENST00000513523.1:n.262+45T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000509016
  gene symbol: ANXA5
  hgvsc: ENST00000509016.1:n.215+45T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl transcript: ENST00000513428
  gene symbol: ANXA5
  hgvsc: ENST00000513428.1:n.259+45T>G
  variant of: http://identifiers.org/hgnc/543
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164111
  ensembl protein: ENSP00000424199
  ensembl transcript: ENST00000515017
  gene symbol: ANXA5
  hgvsc: ENST00000515017.1:c.94+45T>G
  variant of: http://identifiers.org/hgnc/543
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6651
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16983
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 144
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7438
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2700
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2670
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10732
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524994662518681e-5
allele num: 65574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

DP
type: SiteQuality
SIO_000300: 2.101793e6

QD
type: SiteQuality
SIO_000300: 3.79e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.39e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.518e0

VQSLOD
type: SiteQuality
SIO_000300: 2.94e-1

MQ
type: SiteQuality
SIO_000300: 5.29e1

GenotypeQuality
all individuals: 804
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3380
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6251
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3294
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4811
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4320
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2982
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1019
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.028383381324558e-4
allele num: 9724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14728
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7940
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.659e0

DP
type: SiteQuality
SIO_000300: 1.392508e6

FS
type: SiteQuality
SIO_000300: 8.022e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.122e0

VQSLOD
type: SiteQuality
SIO_000300: -2.272e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.736e0

QD
type: SiteQuality
SIO_000300: 5.98e0

GenotypeQuality
all individuals: 3860
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 7.5e0
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28526
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8024
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10924
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.714113065664025e-5
allele num: 14894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.635750973271829e-5
allele num: 61134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.734e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.2e-2

FS
type: SiteQuality
SIO_000300: 8.68e-1

DP
type: SiteQuality
SIO_000300: 1.457766e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.28e-1

GenotypeQuality
all individuals: 1057
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.015022330491271e-4
allele num: 9852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15058
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.515583e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

FS
type: SiteQuality
SIO_000300: 3.377e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.74e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.53e-1

QD
type: SiteQuality
SIO_000300: 2.444e1

MQ
type: SiteQuality
SIO_000300: 5.893e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.991e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.002e0

GenotypeQuality
all individuals: 1454
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2641
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variant carriers: 0

GenotypeQuality
all individuals: 4351
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 41415
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3846
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variant carriers: 0

GenotypeQuality
all individuals: 1117
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variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.577635440002524e-5
allele num: 63386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10054
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8366
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.071e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.203e0

MQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.98e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.591155e6

QD
type: SiteQuality
SIO_000300: 1.759e1

GenotypeQuality
all individuals: 10984
bin: 9.75e1
variant carriers: 7686

GenotypeQuality
all individuals: 241
bin: 4.75e1
variant carriers: 8

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 301
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variant carriers: 18

GenotypeQuality
all individuals: 762
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 39380
bin: 6.25e1
variant carriers: 19

GenotypeQuality
all individuals: 645
bin: 7.25e1
variant carriers: 20

GenotypeQuality
all individuals: 1714
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 219
bin: 8.75e1
variant carriers: 26

GenotypeQuality
all individuals: 521
bin: 8.25e1
variant carriers: 41

GenotypeQuality
all individuals: 337
bin: 9.25e1
variant carriers: 27

GenotypeQuality
all individuals: 312
bin: 5.75e1
variant carriers: 13

GenotypeQuality
all individuals: 750
bin: 7.75e1
variant carriers: 34

Latino
type: Population
allele count: 418
allele frequency: 3.722172751558326e-2
allele num: 11230
num of homozygotes: 9

European (Non-Finnish)
type: Population
allele count: 3646
allele frequency: 5.646760004956015e-2
allele num: 64568
num of homozygotes: 114

South Asian
type: Population
allele count: 2084
allele frequency: 1.321664129883308e-1
allele num: 15768
num of homozygotes: 170

African
type: Population
allele count: 2116
allele frequency: 2.071666340317212e-1
allele num: 10214
num of homozygotes: 221

Other
type: Population
allele count: 57
allele frequency: 6.462585034013606e-2
allele num: 882
num of homozygotes: 1

East Asian
type: Population
allele count: 3
allele frequency: 3.530242409978819e-4
allele num: 8498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 126
allele frequency: 1.938461538461539e-2
allele num: 6500
num of homozygotes: 1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.67e0

VQSLOD
type: SiteQuality
SIO_000300: 6.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.83e-1

DP
type: SiteQuality
SIO_000300: 1.75232e6

QD
type: SiteQuality
SIO_000300: 1.705e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 305
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3948
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 220
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variant carriers: 0

GenotypeQuality
all individuals: 4032
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variant carriers: 0

GenotypeQuality
all individuals: 927
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variant carriers: 0

GenotypeQuality
all individuals: 569
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variant carriers: 0

GenotypeQuality
all individuals: 214
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GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 609
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GenotypeQuality
all individuals: 381
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1408
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537326282130119e-5
allele num: 65048
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

VQSLOD
type: SiteQuality
SIO_000300: -1.131e-1

QD
type: SiteQuality
SIO_000300: 1.685e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 1.648098e6

MQRankSum
type: SiteQuality
SIO_000300: -6.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3945
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 269
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 48971
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GenotypeQuality
all individuals: 233
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GenotypeQuality
all individuals: 4273
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variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.076e0

DP
type: SiteQuality
SIO_000300: 1.68818e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.204e1

MQRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

FS
type: SiteQuality
SIO_000300: 3.473e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.917e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 48977
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4270
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 231
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variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3941
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 908
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.008785654110001e-5
allele num: 66472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.82e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.115e0

VQSLOD
type: SiteQuality
SIO_000300: 3.58e0

DP
type: SiteQuality
SIO_000300: 1.688791e6

QD
type: SiteQuality
SIO_000300: 1.475e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.35e-1

GenotypeQuality
all individuals: 49003
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 57
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GenotypeQuality
all individuals: 55
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GenotypeQuality
all individuals: 42
bin: 3.75e1
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GenotypeQuality
all individuals: 4270
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GenotypeQuality
all individuals: 368
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GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 230
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GenotypeQuality
all individuals: 572
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variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
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variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504347564461293e-5
allele num: 66474
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.6892e6

FS
type: SiteQuality
SIO_000300: 5.949e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.897e0

MQRankSum
type: SiteQuality
SIO_000300: 3.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.1e-2

MQ
type: SiteQuality
SIO_000300: 5.971e1

QD
type: SiteQuality
SIO_000300: 1.034e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502765087761481e-5
allele num: 66544
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.883e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.18e0

MQRankSum
type: SiteQuality
SIO_000300: -2.08e-1

QD
type: SiteQuality
SIO_000300: 1.511e1

DP
type: SiteQuality
SIO_000300: 1.690438e6

VQSLOD
type: SiteQuality
SIO_000300: -7.401e-1

ReadPosRankSum
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SIO_000300: -3.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 3.594e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.77e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501907422426482e-5
allele num: 66582
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.26e-1

FS
type: SiteQuality
SIO_000300: 1.8106e1

VQSLOD
type: SiteQuality
SIO_000300: -2.53e0

MQ
type: SiteQuality
SIO_000300: 5.876e1

QD
type: SiteQuality
SIO_000300: 1.105e1

DP
type: SiteQuality
SIO_000300: 1.691919e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.625346901017577e-4
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00336376741951e-5
allele num: 66592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.91e-1

QD
type: SiteQuality
SIO_000300: 1.159e1

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 1.892e0

DP
type: SiteQuality
SIO_000300: 1.692507e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 3
allele frequency: 1.819063788503517e-4
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.505316273202379e-5
allele num: 66588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.692379e6

MQRankSum
type: SiteQuality
SIO_000300: -6.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 2.544e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.81e-1

QD
type: SiteQuality
SIO_000300: 1.025e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50159168718842e-5
allele num: 66596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
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ClippingRankSum
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MQRankSum
type: SiteQuality
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MQ
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VQSLOD
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BaseQRankSum
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SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.77e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 9.646922631680494e-5
allele num: 10366
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South Asian
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Other
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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BaseQRankSum
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DP
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MQ
type: SiteQuality
SIO_000300: 5.693e1

FS
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QD
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 9
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allele num: 66590
num of homozygotes: 0

East Asian
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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Latino
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.28e-1

MQRankSum
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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SIO_000300: 1.44e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
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allele frequency: 8.665511265164645e-5
allele num: 11540
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Other
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MQRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQ
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DP
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FS
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4282
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502042778178322e-5
allele num: 66576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 1.691811e6

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.024e0

QD
type: SiteQuality
SIO_000300: 1.05e1

GenotypeQuality
all individuals: 880
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4159
bin: 9.75e1
variant carriers: 274

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4255
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 215
allele frequency: 3.229586012137235e-3
allele num: 66572
num of homozygotes: 2

South Asian
type: Population
allele count: 17
allele frequency: 1.030802813485326e-3
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.325942350332594e-3
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.752845842176346e-4
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.515610791148833e-4
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 33
allele frequency: 2.860114404576183e-3
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.42e-2

DP
type: SiteQuality
SIO_000300: 1.704926e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.327e1

VQSLOD
type: SiteQuality
SIO_000300: 5.94e0

GenotypeQuality
all individuals: 837
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
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GenotypeQuality
all individuals: 49310
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

FS
type: SiteQuality
SIO_000300: 3.613e0

MQRankSum
type: SiteQuality
SIO_000300: 5.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e0

VQSLOD
type: SiteQuality
SIO_000300: -2.893e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 1.691959e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.662e0

QD
type: SiteQuality
SIO_000300: 1.401e1

GenotypeQuality
all individuals: 549
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 221
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 29
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GenotypeQuality
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GenotypeQuality
all individuals: 831
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GenotypeQuality
all individuals: 4269
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variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502765087761481e-5
allele num: 66544
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.238e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.24e0

DP
type: SiteQuality
SIO_000300: 1.690827e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4244
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variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 221
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GenotypeQuality
all individuals: 3906
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variant carriers: 1

GenotypeQuality
all individuals: 516
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GenotypeQuality
all individuals: 548
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GenotypeQuality
all individuals: 362
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variant carriers: 0

GenotypeQuality
all individuals: 48862
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.242e1

DP
type: SiteQuality
SIO_000300: 1.686913e6

FS
type: SiteQuality
SIO_000300: 1.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.61e0

VQSLOD
type: SiteQuality
SIO_000300: 3.82e-1

MQ
type: SiteQuality
SIO_000300: 5.927e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1152
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 73
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variant carriers: 0

GenotypeQuality
all individuals: 146
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variant carriers: 0

GenotypeQuality
all individuals: 4106
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 48048
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variant carriers: 0

GenotypeQuality
all individuals: 357
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variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
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GenotypeQuality
all individuals: 3905
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variant carriers: 1

GenotypeQuality
all individuals: 537
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16198001394376e-4
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66058
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.489e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.104e0

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

QD
type: SiteQuality
SIO_000300: 6.59e0

DP
type: SiteQuality
SIO_000300: 1.677139e6

GenotypeQuality
all individuals: 238
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1655
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.039421294185587e-5
allele num: 65802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.899029895070283e-5
allele num: 10102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

FS
type: SiteQuality
SIO_000300: 1.799e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 1.322e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.419999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.12e0

DP
type: SiteQuality
SIO_000300: 1.668537e6

GenotypeQuality
all individuals: 269
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47024
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variant carriers: 0

GenotypeQuality
all individuals: 1933
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 842
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variant carriers: 0

GenotypeQuality
all individuals: 218
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GenotypeQuality
all individuals: 4030
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GenotypeQuality
all individuals: 47
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GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 69
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GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3903
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10070
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.165988407941794e-5
allele num: 16218
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.353e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.01e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

MQRankSum
type: SiteQuality
SIO_000300: -1.475e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.278e0

DP
type: SiteQuality
SIO_000300: 1.663641e6

FS
type: SiteQuality
SIO_000300: 4.664e0

QD
type: SiteQuality
SIO_000300: 1.383e1

GenotypeQuality
all individuals: 502
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3833
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45190
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variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
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variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.247660636306925e-4
allele num: 16030
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64986
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

FS
type: SiteQuality
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QD
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VQSLOD
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SIO_000300: 6.48e-1

InbreedingCoeff
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SIO_000300: 2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-2

MQ
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SIO_000300: 5.936e1

MQRankSum
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SIO_000300: -5.09e-1

ClippingRankSum
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SIO_000300: 2.2e-2

DP
type: SiteQuality
SIO_000300: 1.643435e6

BaseQRankSum
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SIO_000300: 1.33e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9706
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63012
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8296
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.416014371872192e-5
allele num: 15586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11166
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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SIO_000300: -9.429999999999999e-1

MQ
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VQSLOD
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DP
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MQRankSum
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QD
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BaseQRankSum
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SIO_000300: 4.63e0

FS
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SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61930
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9572
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11030
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.522306287503261e-5
allele num: 15332
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8142
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.419101e6

FS
type: SiteQuality
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MQRankSum
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BaseQRankSum
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SIO_000300: 1.37e0

ClippingRankSum
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SIO_000300: 4.87e-1

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 2
allele frequency: 2.089427496865859e-4
allele num: 9572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61930
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15332
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.87e-1

DP
type: SiteQuality
SIO_000300: 1.419101e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10948
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 1.370729649936736e-3
allele num: 9484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61190
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8054
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15158
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.92e-1

MQRankSum
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SIO_000300: 1.93e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.367844e6

QD
type: SiteQuality
SIO_000300: 1.303e1

BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 59076
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South Asian
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allele frequency: 6.803646754660499e-5
allele num: 14698
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
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InbreedingCoeff
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SIO_000300: -4.3e-3

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.454e1

DP
type: SiteQuality
SIO_000300: 1.295452e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.518344478583047e-5
allele num: 66396
num of homozygotes: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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DP
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66408
num of homozygotes: 0

Latino
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Other
type: Population
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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DP
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MQ
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VQSLOD
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MQRankSum
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FS
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ReadPosRankSum
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ClippingRankSum
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SIO_000300: -8.47e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504211793020457e-5
allele num: 66480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
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Other
type: Population
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allele num: 900
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.543014e6

ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: 2.1e-3

ReadPosRankSum
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SIO_000300: 3.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-1

FS
type: SiteQuality
SIO_000300: 3.041e0

QD
type: SiteQuality
SIO_000300: 1.386e1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503668952243474e-5
allele num: 66504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

DP
type: SiteQuality
SIO_000300: 2.543395e6

MQ
type: SiteQuality
SIO_000300: 6.019e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

QD
type: SiteQuality
SIO_000300: 1.197e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66500
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.235e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

DP
type: SiteQuality
SIO_000300: 2.544407e6

VQSLOD
type: SiteQuality
SIO_000300: -9.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

FS
type: SiteQuality
SIO_000300: 4.101e0

QD
type: SiteQuality
SIO_000300: 1.9e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.0e-2

FS
type: SiteQuality
SIO_000300: 3.133e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.373e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.7e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

DP
type: SiteQuality
SIO_000300: 2.549847e6

QD
type: SiteQuality
SIO_000300: 1.696e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.2e0

MQ
type: SiteQuality
SIO_000300: 5.434e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.41e0

QD
type: SiteQuality
SIO_000300: 1.834e1

FS
type: SiteQuality
SIO_000300: 9.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.78e-1

DP
type: SiteQuality
SIO_000300: 2.550968e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.156119182467373e-5
allele num: 16244
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66550
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.684e0

MQRankSum
type: SiteQuality
SIO_000300: -5.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

FS
type: SiteQuality
SIO_000300: 7.473e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.99e-1

DP
type: SiteQuality
SIO_000300: 2.551604e6

QD
type: SiteQuality
SIO_000300: 8.26e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.144015728680265e-5
allele num: 16276
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.971e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele num: 8654
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.501817198810561e-5
allele num: 66586
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e-1

FS
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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VQSLOD
type: SiteQuality
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BaseQRankSum
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DP
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MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500645277469312e-5
allele num: 66638
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.33e-1

FS
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DP
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ClippingRankSum
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MQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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QD
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InbreedingCoeff
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SIO_000300: 8.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

South Asian
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allele num: 16480
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Other
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.500645277469312e-5
allele num: 66638
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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QD
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FS
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MQ
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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QD
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FS
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MQ
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10406
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
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MQ
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MQRankSum
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QD
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InbreedingCoeff
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FS
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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VQSLOD
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MQ
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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QD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele num: 10406
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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VQSLOD
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ClippingRankSum
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QD
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MQ
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DP
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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African
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European (Non-Finnish)
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East Asian
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Latino
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European (Finnish)
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FS
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ReadPosRankSum
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MQRankSum
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DP
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QD
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VQSLOD
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MQ
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Other
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African
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European (Non-Finnish)
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Latino
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South Asian
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InbreedingCoeff
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MQ
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MQRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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DP
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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South Asian
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Other
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QD
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ClippingRankSum
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MQRankSum
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MQ
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BaseQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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East Asian
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African
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Latino
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European (Finnish)
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South Asian
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allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 1.778e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.984e1

DP
type: SiteQuality
SIO_000300: 2.562739e6

QD
type: SiteQuality
SIO_000300: 1.339e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.77e0

GenotypeQuality
all individuals: 12712
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25472
bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.998080614203455e-5
allele num: 66688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.78e-1

FS
type: SiteQuality
SIO_000300: 1.852e0

DP
type: SiteQuality
SIO_000300: 2.562118e6

QD
type: SiteQuality
SIO_000300: 1.361e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 12709
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GenotypeQuality
all individuals: 5009
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.498e1

MQRankSum
type: SiteQuality
SIO_000300: 6.44e-1

DP
type: SiteQuality
SIO_000300: 2.562368e6

VQSLOD
type: SiteQuality
SIO_000300: 5.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.45e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.049601151562406e-4
allele num: 66692
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.498e1

MQRankSum
type: SiteQuality
SIO_000300: 6.44e-1

DP
type: SiteQuality
SIO_000300: 2.562368e6

VQSLOD
type: SiteQuality
SIO_000300: 5.11e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.41e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2607
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variant carriers: 0

GenotypeQuality
all individuals: 2317
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.561745e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.0608e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.999e0

MQRankSum
type: SiteQuality
SIO_000300: -9.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.514e0

QD
type: SiteQuality
SIO_000300: 9.800000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: 9.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.21e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.28e-1

DP
type: SiteQuality
SIO_000300: 2.561621e6

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002191599867904e-5
allele num: 66618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.37e-1

DP
type: SiteQuality
SIO_000300: 2.556897e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 6.22e-1

QD
type: SiteQuality
SIO_000300: 1.299e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.74e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.109481915933529e-5
allele num: 16368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.439e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.004e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.105e1

DP
type: SiteQuality
SIO_000300: 2.556448e6

VQSLOD
type: SiteQuality
SIO_000300: 8.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.81e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66556
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 2.546596e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e0

QD
type: SiteQuality
SIO_000300: 1.654e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66538
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.664e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.382e1

VQSLOD
type: SiteQuality
SIO_000300: 4.14e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

DP
type: SiteQuality
SIO_000300: 2.541928e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66464
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.231678778174652e-4
allele num: 16238
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.47e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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InbreedingCoeff
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QD
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MQ
type: SiteQuality
SIO_000300: 5.914e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.56e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.191183754333828e-5
allele num: 16152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.59e-1

DP
type: SiteQuality
SIO_000300: 2.516127e6

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

MQ
type: SiteQuality
SIO_000300: 5.915e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66398
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.998e1

QD
type: SiteQuality
SIO_000300: 7.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.515742e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e0

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.520659413519785e-5
allele num: 66362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.58e-1

QD
type: SiteQuality
SIO_000300: 1.257e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.64e-1

FS
type: SiteQuality
SIO_000300: 1.123e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.861e0

DP
type: SiteQuality
SIO_000300: 2.512801e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Finnish)
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allele count: 2
allele frequency: 3.03030303030303e-4
allele num: 6600
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66384
num of homozygotes: 0

East Asian
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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DP
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
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allele count: 0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66292
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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MQRankSum
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ClippingRankSum
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MQ
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 2.314814814814815e-4
allele num: 8640
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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FS
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MQRankSum
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QD
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VQSLOD
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ClippingRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15728
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.225189904435187e-4
allele num: 8162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65074
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.98e-1

QD
type: SiteQuality
SIO_000300: 1.126e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

DP
type: SiteQuality
SIO_000300: 1.686025e6

MQ
type: SiteQuality
SIO_000300: 6.0e1