1-27023398-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023398
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023398
    reference: chr 1
allele count: 2
allele frequency: 3.095975232198143e-4
allele num: 6460
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.504C>T
  hgvsp: ENST00000324856.7:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.504C>T
  hgvsp: ENST00000457599.2:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 0
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  variant carriers: 0
hgvs: p.Val168Val
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 592
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-27023402-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023402
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023402
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 7374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.508C>T
  hgvsp: ENSP00000387636.2:p.His170Tyr
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.508C>T
  hgvsp: ENSP00000320485.7:p.His170Tyr
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 779
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His170Tyr
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4198
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/1-27023405-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023405
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023405
    reference: chr 1
allele count: 1
allele frequency: 1.179245283018868e-4
allele num: 8480
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.511C>A
  hgvsp: ENSP00000387636.2:p.Gln171Lys
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.511C>A
  hgvsp: ENSP00000320485.7:p.Gln171Lys
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32629
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gln171Lys
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 228
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/1-27023407-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023407
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023407
    reference: chr 1
allele count: 1
allele frequency: 1.103265666372463e-4
allele num: 9064
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.513A>C
  hgvsp: ENSP00000387636.2:p.Gln171His
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.513A>C
  hgvsp: ENSP00000320485.7:p.Gln171His
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18501
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Gln171His
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1148
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-27023413-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023413
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023413
    reference: chr 1
allele count: 1
allele frequency: 9.47867298578199e-5
allele num: 10550
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.519T>G
  hgvsp: ENSP00000387636.2:p.His173Gln
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.519T>G
  hgvsp: ENSP00000320485.7:p.His173Gln
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.His173Gln
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 930
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
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site quality: QD

1-27023429-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023429
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023429
    reference: chr 1
allele count: 16
allele frequency: 1.054574215660427e-3
allele num: 15172
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.535C>T
  hgvsp: ENSP00000387636.2:p.Pro179Ser
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.535C>T
  hgvsp: ENSP00000320485.7:p.Pro179Ser
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Pro179Ser
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
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  allele num: 1648
  num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: DP
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1-27023431-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023431
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023431
    reference: chr 1
allele count: 1
allele frequency: 6.333122229259025e-5
allele num: 15790
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.537T>C
  hgvsp: ENST00000324856.7:c.537T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.537T>C
  hgvsp: ENST00000457599.2:c.537T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Pro179Pro
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population: European (Finnish)
  type: Population
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  allele num: 458
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population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
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site quality: DP
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1-27023433-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023433
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023433
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 16146
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.539G>C
  hgvsp: ENSP00000320485.7:p.Gly180Ala
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.539G>C
  hgvsp: ENSP00000387636.2:p.Gly180Ala
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Gly180Ala
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population: European (Non-Finnish)
  type: Population
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  allele num: 9462
  num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
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site quality: FS
site quality: VQSLOD
site quality: MQ
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1-27023435-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023435
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023435
    reference: chr 1
allele count: 1
allele frequency: 5.910165484633569e-5
allele num: 16920
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.541C>T
  hgvsp: ENST00000324856.7:c.541C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
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  hgvsp: ENST00000457599.2:c.541C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2074
  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu181Leu
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1290
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

1-27023437-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023437
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023437
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 17544
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.543G>T
  hgvsp: ENST00000324856.7:c.543G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.543G>T
  hgvsp: ENST00000457599.2:c.543G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Leu181Leu
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 560
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/1-27023440-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023440
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023440
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 18232
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.546A>C
  hgvsp: ENST00000324856.7:c.546A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.546A>C
  hgvsp: ENST00000457599.2:c.546A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 34999
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1773
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hgvs: p.Ala182Ala
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10628
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum

1-27023441-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023441
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023441
    reference: chr 1
allele count: 9
allele frequency: 4.859611231101512e-4
allele num: 18520
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.547G>A
  hgvsp: ENSP00000320485.7:p.Ala183Thr
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.547G>A
  hgvsp: ENSP00000387636.2:p.Ala183Thr
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1438
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 214
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hgvs: p.Ala183Thr
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1508
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

1-27023442-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023442
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023442
    reference: chr 1
allele count: 1
allele frequency: 5.353892279687333e-5
allele num: 18678
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.548C>T
  hgvsp: ENSP00000320485.7:p.Ala183Val
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.548C>T
  hgvsp: ENSP00000387636.2:p.Ala183Val
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5881
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12925
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala183Val
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1376
  num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

1-27023443-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023443
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023443
    reference: chr 1
allele count: 1
allele frequency: 5.187260089220873e-5
allele num: 19278
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.549G>A
  hgvsp: ENST00000324856.7:c.549G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.549G>A
  hgvsp: ENST00000457599.2:c.549G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2107
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala183Ala
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 126
  num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

1-27023444-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023444
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023444
    reference: chr 1
allele count: 4
allele frequency: 2.015722636565209e-4
allele num: 19844
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.550C>T
  hgvsp: ENST00000457599.2:c.550C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.550C>T
  hgvsp: ENST00000324856.7:c.550C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12084
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 4
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Leu184Leu
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2016
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ

1-27023445-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023445
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023445
    reference: chr 1
allele count: 1
allele frequency: 4.988526389304599e-5
allele num: 20046
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.551T>C
  hgvsp: ENSP00000387636.2:p.Leu184Pro
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.551T>C
  hgvsp: ENSP00000320485.7:p.Leu184Pro
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34827
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu184Pro
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 6.963788300835655e-4
  allele num: 1436
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP

1-27023449-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023449
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023449
    reference: chr 1
allele count: 1
allele frequency: 4.995504046358277e-5
allele num: 20018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.555G>A
  hgvsp: ENST00000457599.2:c.555G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.555G>A
  hgvsp: ENST00000324856.7:c.555G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29767
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln185Gln
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 556
  num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

1-27023450-A-AGCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023450
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023453
    reference: chr 1
allele count: 2
allele frequency: 1.041883725776203e-4
allele num: 19196
alternate allele: AGCG
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.567_569dupCGG
  hgvsp: ENSP00000387636.2:p.Gly190dup
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.567_569dupCGG
  hgvsp: ENSP00000320485.7:p.Gly190dup
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7109
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33026
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11543
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12475
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2636
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28855
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2764
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly190dup
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 542
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

1-27023450-AGCG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023450
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023447
    reference: chr 1
allele count: 24
allele frequency: 1.250260470931444e-3
allele num: 19196
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.567_569delCGG
  hgvsp: ENSP00000320485.7:p.Gly191del
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.567_569delCGG
  hgvsp: ENSP00000387636.2:p.Gly191del
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 33026
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7109
  bin: 1.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 11543
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2764
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28855
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 12475
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2636
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly191del
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.845018450184502e-3
  allele num: 542
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: AGCG
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

1-27023450-AGCGGCG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023450
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023444
    reference: chr 1
allele count: 2
allele frequency: 1.041883725776203e-4
allele num: 19196
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.564_569delCGGCGG
  hgvsp: ENSP00000320485.7:p.Gly190_Gly191del
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.564_569delCGGCGG
  hgvsp: ENSP00000387636.2:p.Gly190_Gly191del
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7109
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11543
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33026
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2764
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12475
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 28855
  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2636
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
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genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly190_Gly191del
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 542
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
reference allele: AGCGGCG
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

1-27023453-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023453
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023453
    reference: chr 1
allele count: 1
allele frequency: 5.180810278727593e-5
allele num: 19302
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.559G>A
  hgvsp: ENSP00000320485.7:p.Gly187Ser
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.559G>A
  hgvsp: ENSP00000387636.2:p.Gly187Ser
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 11379
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1802
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genotype depth: GenotypeDepth
  all individuals: 417
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genotype depth: GenotypeDepth
  all individuals: 2623
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 11862
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 874
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 3465
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
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genotype quality: GenotypeQuality
  all individuals: 298
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1751
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1440
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly187Ser
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1942
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

1-27023454-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023454
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023454
    reference: chr 1
allele count: 1
allele frequency: 5.043373007867662e-5
allele num: 19828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.560G>T
  hgvsp: ENSP00000387636.2:p.Gly187Val
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.560G>T
  hgvsp: ENSP00000320485.7:p.Gly187Val
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Gly187Val
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 554
  num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP

1-27023473-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023473
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023473
    reference: chr 1
allele count: 2
allele frequency: 7.679311933650745e-5
allele num: 26044
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.579G>T
  hgvsp: ENSP00000320485.7:p.Glu193Asp
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.579G>T
  hgvsp: ENSP00000387636.2:p.Glu193Asp
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10899
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Glu193Asp
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1660
  num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

1-27023474-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023474
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023474
    reference: chr 1
allele count: 2
allele frequency: 7.572315614114796e-5
allele num: 26412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.580C>T
  hgvsp: ENSP00000387636.2:p.Pro194Ser
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.580C>T
  hgvsp: ENSP00000320485.7:p.Pro194Ser
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro194Ser
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 15118
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
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site quality: MQ
site quality: QD
site quality: DP

1-27023475-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023475
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023475
    reference: chr 1
allele count: 4
allele frequency: 1.484450382245973e-4
allele num: 26946
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.581C>T
  hgvsp: ENSP00000320485.7:p.Pro194Leu
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.581C>T
  hgvsp: ENSP00000387636.2:p.Pro194Leu
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Pro194Leu
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 812
  num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

1-27023485-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023485
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023485
    reference: chr 1
allele count: 1
allele frequency: 3.227263925643839e-5
allele num: 30986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.591G>A
  hgvsp: ENST00000457599.2:c.591G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.591G>A
  hgvsp: ENST00000324856.7:c.591G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 388
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  variant carriers: 0
hgvs: p.Gly197Gly
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 940
  num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

1-27023485-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023485
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023485
    reference: chr 1
allele count: 2
allele frequency: 6.454527851287678e-5
allele num: 30986
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.591G>T
  hgvsp: ENST00000324856.7:c.591G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.591G>T
  hgvsp: ENST00000457599.2:c.591G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly197Gly
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1908
  num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

1-27023486-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023486
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023486
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 31316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.592C>T
  hgvsp: ENSP00000387636.2:p.Pro198Ser
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.592C>T
  hgvsp: ENSP00000320485.7:p.Pro198Ser
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro198Ser
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2620
  num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
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site quality: MQ
site quality: DP

1-27023490-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023490
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023490
    reference: chr 1
allele count: 1
allele frequency: 2.973535533749628e-5
allele num: 33630
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.596A>G
  hgvsp: ENSP00000320485.7:p.Gln199Arg
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.596A>G
  hgvsp: ENSP00000387636.2:p.Gln199Arg
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 702
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Gln199Arg
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2042
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
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1-27023499-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023499
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023499
    reference: chr 1
allele count: 1
allele frequency: 2.675084265154352e-5
allele num: 37382
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.605C>T
  hgvsp: ENSP00000320485.7:p.Ser202Phe
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.605C>T
  hgvsp: ENSP00000387636.2:p.Ser202Phe
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1787
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser202Phe
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3006
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-27023503-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023503
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023503
    reference: chr 1
allele count: 6
allele frequency: 1.556500985783958e-4
allele num: 38548
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.609C>A
  hgvsp: ENSP00000387636.2:p.His203Gln
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.609C>A
  hgvsp: ENSP00000320485.7:p.His203Gln
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31960
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.His203Gln
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3538
  num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
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site quality: InbreedingCoeff
site quality: VQSLOD
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1-27023503-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023503
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023503
    reference: chr 1
allele count: 1
allele frequency: 2.594168309639929e-5
allele num: 38548
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.609C>G
  hgvsp: ENSP00000320485.7:p.His203Gln
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.609C>G
  hgvsp: ENSP00000387636.2:p.His203Gln
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.His203Gln
num of homozygotes: 0
population: European (Finnish)
  type: Population
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  allele frequency: 0.0e0
  allele num: 1192
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population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
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1-27023506-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023506
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023506
    reference: chr 1
allele count: 2
allele frequency: 5.014542172299669e-5
allele num: 39884
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.612C>G
  hgvsp: ENSP00000320485.7:p.Asp204Glu
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.612C>G
  hgvsp: ENSP00000387636.2:p.Asp204Glu
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Asp204Glu
num of homozygotes: 0
population: African
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  allele num: 2404
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population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
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1-27023510-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023510
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023510
    reference: chr 1
allele count: 1
allele frequency: 2.413826397605484e-5
allele num: 41428
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.616G>A
  hgvsp: ENSP00000320485.7:p.Gly206Ser
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.616G>A
  hgvsp: ENSP00000387636.2:p.Gly206Ser
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 1
hgvs: p.Gly206Ser
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1310
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

1-27023512-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023512
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023512
    reference: chr 1
allele count: 1
allele frequency: 2.374394529395004e-5
allele num: 42116
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.618C>T
  hgvsp: ENST00000324856.7:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.618C>T
  hgvsp: ENST00000457599.2:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly206Gly
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3974
  num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-27023516-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023516
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023516
    reference: chr 1
allele count: 2
allele frequency: 4.605747973470892e-5
allele num: 43424
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.622C>A
  hgvsp: ENSP00000320485.7:p.Pro208Thr
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.622C>A
  hgvsp: ENSP00000387636.2:p.Pro208Thr
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5724
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Pro208Thr
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 290
  num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-27023517-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023517
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023517
    reference: chr 1
allele count: 1
allele frequency: 2.291895856252292e-5
allele num: 43632
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.623C>A
  hgvsp: ENSP00000320485.7:p.Pro208His
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.623C>A
  hgvsp: ENSP00000387636.2:p.Pro208His
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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hgvs: p.Pro208His
num of homozygotes: 0
population: East Asian
  type: Population
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  allele num: 3426
  num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
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site quality: BaseQRankSum
site quality: QD
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1-27023517-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023517
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023517
    reference: chr 1
allele count: 1
allele frequency: 2.291895856252292e-5
allele num: 43632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.623C>T
  hgvsp: ENSP00000387636.2:p.Pro208Leu
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.623C>T
  hgvsp: ENSP00000320485.7:p.Pro208Leu
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Pro208Leu
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2668
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/1-27023518-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023518
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023518
    reference: chr 1
allele count: 1
allele frequency: 2.280085731223494e-5
allele num: 43858
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.624C>A
  hgvsp: ENST00000457599.2:c.624C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.624C>A
  hgvsp: ENST00000324856.7:c.624C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro208Pro
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4136
  num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

1-27023520-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023520
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023520
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 44152
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.626A>G
  hgvsp: ENSP00000320485.7:p.Asn209Ser
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.626A>G
  hgvsp: ENSP00000387636.2:p.Asn209Ser
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asn209Ser
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1410
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ

1-27023524-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023524
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023524
    reference: chr 1
allele count: 1
allele frequency: 2.21837703536093e-5
allele num: 45078
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.630C>T
  hgvsp: ENST00000324856.7:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.630C>T
  hgvsp: ENST00000457599.2:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.His210His
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2740
  num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
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site quality: VQSLOD

1-27023534-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023534
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023534
    reference: chr 1
allele count: 1
allele frequency: 2.249820014398848e-5
allele num: 44448
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.640T>C
  hgvsp: ENSP00000320485.7:p.Ser214Pro
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.640T>C
  hgvsp: ENSP00000387636.2:p.Ser214Pro
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser214Pro
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3590
  num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

1-27023535-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023535
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023535
    reference: chr 1
allele count: 1
allele frequency: 2.265416156948031e-5
allele num: 44142
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.641C>T
  hgvsp: ENSP00000320485.7:p.Ser214Phe
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.641C>T
  hgvsp: ENSP00000387636.2:p.Ser214Phe
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser214Phe
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2716
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

1-27023536-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023536
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023536
    reference: chr 1
allele count: 1
allele frequency: 2.261931689662972e-5
allele num: 44210
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.642C>T
  hgvsp: ENST00000324856.7:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.642C>T
  hgvsp: ENST00000457599.2:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser214Ser
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4208
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

1-27023538-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023538
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023538
    reference: chr 1
allele count: 1
allele frequency: 2.297794117647059e-5
allele num: 43520
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.644A>G
  hgvsp: ENSP00000387636.2:p.Tyr215Cys
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.644A>G
  hgvsp: ENSP00000320485.7:p.Tyr215Cys
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Tyr215Cys
num of homozygotes: 0
population: South Asian
  type: Population
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  allele frequency: 0.0e0
  allele num: 6904
  num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

1-27023539-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023539
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023539
    reference: chr 1
allele count: 3
allele frequency: 6.945730690868679e-5
allele num: 43192
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.645C>T
  hgvsp: ENST00000324856.7:c.645C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.645C>T
  hgvsp: ENST00000457599.2:c.645C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Tyr215Tyr
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3492
  num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

1-27023548-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023548
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023548
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 41428
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.654C>T
  hgvsp: ENST00000457599.2:c.654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.654C>T
  hgvsp: ENST00000324856.7:c.654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
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  variant carriers: 0
hgvs: p.Asn218Asn
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2580
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

1-27023551-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023551
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023551
    reference: chr 1
allele count: 4
allele frequency: 9.963632740497185e-5
allele num: 40146
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.657C>T
  hgvsp: ENST00000324856.7:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.657C>T
  hgvsp: ENST00000457599.2:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Arg219Arg
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3848
  num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

1-27023556-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023556
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023556
    reference: chr 1
allele count: 8
allele frequency: 2.085397007455294e-4
allele num: 38362
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.662C>T
  hgvsp: ENSP00000320485.7:p.Ala221Val
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.662C>T
  hgvsp: ENSP00000387636.2:p.Ala221Val
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala221Val
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3664
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

1-27023560-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023560
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023560
    reference: chr 1
allele count: 1
allele frequency: 2.738825591586328e-5
allele num: 36512
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.666C>T
  hgvsp: ENST00000457599.2:c.666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.666C>T
  hgvsp: ENST00000324856.7:c.666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Tyr222Tyr
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3474
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

1-27023569-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023569
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023569
    reference: chr 1
allele count: 4
allele frequency: 1.196959722305344e-4
allele num: 33418
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.675C>T
  hgvsp: ENST00000324856.7:c.675C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.675C>T
  hgvsp: ENST00000457599.2:c.675C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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hgvs: p.Pro225Pro
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3222
  num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-27023570-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023570
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023570
    reference: chr 1
allele count: 1
allele frequency: 3.073329645337759e-5
allele num: 32538
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.676G>T
  hgvsp: ENSP00000387636.2:p.Ala226Ser
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.676G>T
  hgvsp: ENSP00000320485.7:p.Ala226Ser
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala226Ser
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 5.035246727089627e-4
  allele num: 1986
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD

1-27023571-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023571
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023571
    reference: chr 1
allele count: 5
allele frequency: 1.549330689142291e-4
allele num: 32272
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.677C>T
  hgvsp: ENSP00000320485.7:p.Ala226Val
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.677C>T
  hgvsp: ENSP00000387636.2:p.Ala226Val
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 3
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala226Val
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 220
  num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: QD
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site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
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site quality: VQSLOD

1-27023573-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023573
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023573
    reference: chr 1
allele count: 1
allele frequency: 3.177427554651754e-5
allele num: 31472
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.679C>T
  hgvsp: ENSP00000320485.7:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.679C>T
  hgvsp: ENSP00000387636.2:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Pro227Ser
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 5.515719801434087e-5
  allele num: 18130
  num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
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site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-27023577-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023577
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023577
    reference: chr 1
allele count: 1
allele frequency: 3.337338139100253e-5
allele num: 29964
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.683C>A
  hgvsp: ENSP00000320485.7:p.Ala228Asp
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.683C>A
  hgvsp: ENSP00000387636.2:p.Ala228Asp
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11986
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala228Asp
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2910
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
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site quality: DP

1-27023577-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023577
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023577
    reference: chr 1
allele count: 2
allele frequency: 6.674676278200507e-5
allele num: 29964
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.683C>T
  hgvsp: ENSP00000387636.2:p.Ala228Val
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.683C>T
  hgvsp: ENSP00000320485.7:p.Ala228Val
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala228Val
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2454
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
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1-27023582-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023582
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023582
    reference: chr 1
allele count: 2
allele frequency: 7.146430358036161e-5
allele num: 27986
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.688G>C
  hgvsp: ENSP00000320485.7:p.Ala230Pro
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.688G>C
  hgvsp: ENSP00000387636.2:p.Ala230Pro
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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num of homozygotes: 0
population: African
  type: Population
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  allele frequency: 0.0e0
  allele num: 1738
  num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
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1-27023583-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023583
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023583
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 27306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.689C>T
  hgvsp: ENSP00000387636.2:p.Ala230Val
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.689C>T
  hgvsp: ENSP00000320485.7:p.Ala230Val
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: African
  type: Population
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  allele num: 1664
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population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
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1-27023585-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023585
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023585
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 26534
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
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  hgvsp: ENSP00000387636.2:p.Leu231Val
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.691C>G
  hgvsp: ENSP00000320485.7:p.Leu231Val
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu231Val
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 15354
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

1-27023590-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023590
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023590
    reference: chr 1
allele count: 1
allele frequency: 4.007694773966015e-5
allele num: 24952
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.696C>T
  hgvsp: ENST00000324856.7:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.696C>T
  hgvsp: ENST00000457599.2:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser232Ser
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 158
  num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
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site quality: VQSLOD
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1-27023592-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023592
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023592
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 24468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.698C>T
  hgvsp: ENSP00000387636.2:p.Ser233Phe
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.698C>T
  hgvsp: ENSP00000320485.7:p.Ser233Phe
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser233Phe
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1450
  num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: QD

1-27023594-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023594
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023594
    reference: chr 1
allele count: 1
allele frequency: 4.202033784351626e-5
allele num: 23798
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.700C>G
  hgvsp: ENSP00000320485.7:p.Pro234Ala
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.700C>G
  hgvsp: ENSP00000387636.2:p.Pro234Ala
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 828
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  variant carriers: 0
genotype depth: GenotypeDepth
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hgvs: p.Pro234Ala
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population: South Asian
  type: Population
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  allele num: 3516
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
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site quality: BaseQRankSum
site quality: DP
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1-27023596-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023596
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023596
    reference: chr 1
allele count: 1
allele frequency: 4.37177581533619e-5
allele num: 22874
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.702G>A
  hgvsp: ENST00000324856.7:c.702G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
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  hgvsp: ENST00000457599.2:c.702G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro234Pro
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 644
  num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-27023620-C-CGCG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023620
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023623
    reference: chr 1
allele count: 3
allele frequency: 2.391581632653061e-4
allele num: 12544
alternate allele: CGCG
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.735_737dupGGC
  hgvsp: ENSP00000387636.2:p.Ala246dup
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.735_737dupGGC
  hgvsp: ENSP00000320485.7:p.Ala246dup
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20917
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19766
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3204
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21416
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3184
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 22
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.75e1
  variant carriers: 6
hgvs: p.Ala246dup
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 392
  num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

1-27023620-CGCG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023620
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023617
    reference: chr 1
allele count: 1
allele frequency: 7.971938775510203e-5
allele num: 12544
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.735_737delGGC
  hgvsp: ENSP00000320485.7:p.Ala247del
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.735_737delGGC
  hgvsp: ENSP00000387636.2:p.Ala247del
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20917
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24162
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21416
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3204
  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 290
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala247del
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.349892008639309e-4
  allele num: 7408
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: CGCG
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

1-27023625-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023625
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023625
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 10072
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.731C>G
  hgvsp: ENSP00000387636.2:p.Ala244Gly
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.731C>G
  hgvsp: ENSP00000320485.7:p.Ala244Gly
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 23171
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16464
  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala244Gly
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 68
  num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

1-27023634-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023634
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023634
    reference: chr 1
allele count: 1
allele frequency: 1.072961373390558e-4
allele num: 9320
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.740C>G
  hgvsp: ENSP00000320485.7:p.Ala247Gly
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.740C>G
  hgvsp: ENSP00000387636.2:p.Ala247Gly
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala247Gly
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 612
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum

1-27023634-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023634
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023634
    reference: chr 1
allele count: 1
allele frequency: 1.072961373390558e-4
allele num: 9320
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.740C>T
  hgvsp: ENSP00000387636.2:p.Ala247Val
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.740C>T
  hgvsp: ENSP00000320485.7:p.Ala247Val
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ala247Val
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.852537977028529e-4
  allele num: 5398
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum

1-27023635-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023635
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023635
    reference: chr 1
allele count: 1
allele frequency: 1.114330287497214e-4
allele num: 8974
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.741C>T
  hgvsp: ENST00000324856.7:c.741C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.741C>T
  hgvsp: ENST00000457599.2:c.741C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala247Ala
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 584
  num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

1-27023637-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023637
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023637
    reference: chr 1
allele count: 1
allele frequency: 1.178411501296253e-4
allele num: 8486
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.743G>T
  hgvsp: ENSP00000387636.2:p.Gly248Val
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.743G>T
  hgvsp: ENSP00000320485.7:p.Gly248Val
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Gly248Val
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
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  allele num: 1532
  num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
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site quality: InbreedingCoeff

1-27023641-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023641
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023641
    reference: chr 1
allele count: 2
allele frequency: 2.452182442373713e-4
allele num: 8156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.747C>T
  hgvsp: ENST00000457599.2:c.747C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.747C>T
  hgvsp: ENST00000324856.7:c.747C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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hgvs: p.Ser249Ser
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 248
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
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site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
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site quality: ClippingRankSum

1-27023651-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023651
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023651
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 7438
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.757C>G
  hgvsp: ENSP00000387636.2:p.Pro253Ala
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.757C>G
  hgvsp: ENSP00000320485.7:p.Pro253Ala
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro253Ala
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 696
  num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
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site quality: FS
site quality: MQ
site quality: QD
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1-27023652-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023652
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023652
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 7256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.758C>T
  hgvsp: ENSP00000387636.2:p.Pro253Leu
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.758C>T
  hgvsp: ENSP00000320485.7:p.Pro253Leu
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Pro253Leu
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 52
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
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site quality: VQSLOD
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site quality: MQ
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1-27023653-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023653
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023653
    reference: chr 1
allele count: 7
allele frequency: 9.557618787547789e-4
allele num: 7324
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.759C>G
  hgvsp: ENST00000324856.7:c.759C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.759C>G
  hgvsp: ENST00000457599.2:c.759C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: European (Finnish)
  type: Population
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  allele frequency: 0.0e0
  allele num: 192
  num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
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site quality: VQSLOD

1-27023671-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023671
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023671
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 6282
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.777C>T
  hgvsp: ENST00000324856.7:c.777C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.777C>T
  hgvsp: ENST00000457599.2:c.777C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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hgvs: p.Ala259Ala
num of homozygotes: 0
population: Other
  type: Population
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  allele frequency: 0.0e0
  allele num: 40
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

1-27023672-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023672
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023672
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 6192
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.778T>A
  hgvsp: ENSP00000320485.7:p.Ser260Thr
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.778T>A
  hgvsp: ENSP00000387636.2:p.Ser260Thr
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: missense
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26489
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20830
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2158
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 281
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2297
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser260Thr
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1218
  num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: QD

1-27023674-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 27023674
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 27023674
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 6222
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000387636
  ensembl transcript: ENST00000457599
  gene symbol: ARID1A
  hgvsc: ENST00000457599.2:c.780C>G
  hgvsp: ENST00000457599.2:c.780C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000117713
  ensembl protein: ENSP00000320485
  ensembl transcript: ENST00000324856
  gene symbol: ARID1A
  hgvsc: ENST00000324856.7:c.780C>G
  hgvsp: ENST00000324856.7:c.780C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11110
canonical: true
consequence: synonymous
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24148
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27050
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2041
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1074
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21667
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26478
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1898
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
hgvs: p.Ser260Ser
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3456
  num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 474
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.582278481012658e-3
allele num: 632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.73224043715847e-4
allele num: 3660
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.116e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.18102e5

FS
type: SiteQuality
SIO_000300: 1.83e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.221e0

QD
type: SiteQuality
SIO_000300: 8.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.49e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.19e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.84e0

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

QD
type: SiteQuality
SIO_000300: 6.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.21e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

MQ
type: SiteQuality
SIO_000300: 5.748e1

VQSLOD
type: SiteQuality
SIO_000300: -1.284e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

DP
type: SiteQuality
SIO_000300: 3.37045e5

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.061005770816158e-4
allele num: 4852
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1086
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.034e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.98e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.09e0

QD
type: SiteQuality
SIO_000300: 4.62e0

DP
type: SiteQuality
SIO_000300: 3.51595e5

VQSLOD
type: SiteQuality
SIO_000300: -2.508e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5176
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.052631578947368e-3
allele num: 950
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.62e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

FS
type: SiteQuality
SIO_000300: 3.31e0

MQ
type: SiteQuality
SIO_000300: 5.747e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.79e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

DP
type: SiteQuality
SIO_000300: 3.58539e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.52e-1

QD
type: SiteQuality
SIO_000300: 9.58e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.65016501650165e-4
allele num: 6060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1290
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.77482e5

FS
type: SiteQuality
SIO_000300: 2.218e0

VQSLOD
type: SiteQuality
SIO_000300: -2.545e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.52e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.545e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.077e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 6.54e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.242152466367713e-3
allele num: 446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 1.686530245109062e-3
allele num: 8894
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1216
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1668
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

QD
type: SiteQuality
SIO_000300: 1.127e1

DP
type: SiteQuality
SIO_000300: 4.15377e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.13e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 9.330000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1244
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1720
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 5.630630630630631e-4
allele num: 1776
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.06e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 4.19762e5

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 7.57e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1806
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1740
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

FS
type: SiteQuality
SIO_000300: 3.399e0

VQSLOD
type: SiteQuality
SIO_000300: -7.318e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.08e-2

QD
type: SiteQuality
SIO_000300: 8.09e0

DP
type: SiteQuality
SIO_000300: 4.21442e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.04e0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.012350678274954e-4
allele num: 9878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1964
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1792
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

FS
type: SiteQuality
SIO_000300: 3.665e0

QD
type: SiteQuality
SIO_000300: 1.214e1

MQRankSum
type: SiteQuality
SIO_000300: 9.55e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.338e0

DP
type: SiteQuality
SIO_000300: 4.26003e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.99e-2

MQ
type: SiteQuality
SIO_000300: 5.777e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.37e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2056
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1834
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.98e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.67e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.29e-1

DP
type: SiteQuality
SIO_000300: 4.31834e5

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 108
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.31703e5

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.767e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.94e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 5.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1362
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 4.166666666666667e-3
allele num: 1920
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 9.269558769002595e-5
allele num: 10788
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.96e-2

DP
type: SiteQuality
SIO_000300: 4.33218e5

FS
type: SiteQuality
SIO_000300: 1.4384e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

VQSLOD
type: SiteQuality
SIO_000300: -1.642e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

QD
type: SiteQuality
SIO_000300: 1.166e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 6.510416666666666e-4
allele num: 1536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.34e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.683e0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-2

DP
type: SiteQuality
SIO_000300: 4.36138e5

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.23e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 7.204610951008645e-4
allele num: 1388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11222
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.39124e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.96e-2

FS
type: SiteQuality
SIO_000300: 1.999e0

VQSLOD
type: SiteQuality
SIO_000300: -2.016e0

MQ
type: SiteQuality
SIO_000300: 5.805e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.98e-1

QD
type: SiteQuality
SIO_000300: 1.435e1

MQRankSum
type: SiteQuality
SIO_000300: 3.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.65e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

DP
type: SiteQuality
SIO_000300: 4.414e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.85e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

QD
type: SiteQuality
SIO_000300: 1.014e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2054
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.32e-1

QD
type: SiteQuality
SIO_000300: 9.380000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.67e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.89e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.42347e5

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.589589417625838e-5
allele num: 11642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.96e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.041e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e-1

QD
type: SiteQuality
SIO_000300: 2.488e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.365e0

DP
type: SiteQuality
SIO_000300: 4.37066e5

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.950948800572861e-5
allele num: 11172
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 4.149377593360996e-4
allele num: 2410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1964
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

FS
type: SiteQuality
SIO_000300: 6.974e0

DP
type: SiteQuality
SIO_000300: 4.45879e5

VQSLOD
type: SiteQuality
SIO_000300: -4.286e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.729999999999999e-2

QD
type: SiteQuality
SIO_000300: 3.51e0

MQ
type: SiteQuality
SIO_000300: 5.918e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e-1

East Asian
type: Population
allele count: 2
allele frequency: 1.018329938900204e-3
allele num: 1964
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 8.950948800572861e-4
allele num: 11172
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 8.333333333333333e-3
allele num: 120
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 3.768844221105527e-3
allele num: 1592
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 7.163323782234957e-4
allele num: 1396
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.244813278008299e-3
allele num: 2410
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.974e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.729999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

DP
type: SiteQuality
SIO_000300: 4.45879e5

VQSLOD
type: SiteQuality
SIO_000300: -4.286e-1

MQ
type: SiteQuality
SIO_000300: 5.918e1

QD
type: SiteQuality
SIO_000300: 3.51e0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.790189760114572e-4
allele num: 11172
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1964
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.918e1

VQSLOD
type: SiteQuality
SIO_000300: -4.286e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.729999999999999e-2

FS
type: SiteQuality
SIO_000300: 6.974e0

QD
type: SiteQuality
SIO_000300: 3.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

DP
type: SiteQuality
SIO_000300: 4.45879e5

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1388
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 4.019292604501608e-4
allele num: 2488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11210
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.874e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.774e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.617e0

DP
type: SiteQuality
SIO_000300: 4.46692e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.84e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-1

QD
type: SiteQuality
SIO_000300: 6.98e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 7.112375533428165e-4
allele num: 1406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2014
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2578
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 4.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.77e0

DP
type: SiteQuality
SIO_000300: 4.47197e5

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 8.741258741258741e-4
allele num: 2288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2228
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4026
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14912
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.549e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

QD
type: SiteQuality
SIO_000300: 1.89e1

DP
type: SiteQuality
SIO_000300: 4.73385e5

VQSLOD
type: SiteQuality
SIO_000300: -2.389e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.55e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.25e-1

East Asian
type: Population
allele count: 2
allele frequency: 8.658008658008658e-4
allele num: 2310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4070
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.55e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.73e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

FS
type: SiteQuality
SIO_000300: 8.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.426e1

DP
type: SiteQuality
SIO_000300: 4.77867e5

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 2.607222004953722e-4
allele num: 15342
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.037e1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 1.512e0

DP
type: SiteQuality
SIO_000300: 4.82367e5

ClippingRankSum
type: SiteQuality
SIO_000300: 5.46e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2698
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5086
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.707111060381235e-5
allele num: 17522
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.36e-1

MQ
type: SiteQuality
SIO_000300: 5.855e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.425e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.99e-2

FS
type: SiteQuality
SIO_000300: 6.143e0

MQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.893e0

DP
type: SiteQuality
SIO_000300: 5.2804e5

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2602
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 940
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 7.412898443291327e-4
allele num: 2698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5086
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European (Non-Finnish)
type: Population
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allele frequency: 0.0e0
allele num: 17522
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.425e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.99e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.36e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.2804e5

FS
type: SiteQuality
SIO_000300: 6.143e0

MQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2748
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 228
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1930
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5120
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 956
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.14e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.291e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 3.22e0

FS
type: SiteQuality
SIO_000300: 7.037e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.32447e5

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18972
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South Asian
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allele frequency: 1.769285208775655e-4
allele num: 5652
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2950
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1020
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
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VQSLOD
type: SiteQuality
SIO_000300: 6.43e-1

FS
type: SiteQuality
SIO_000300: 1.76e0

MQRankSum
type: SiteQuality
SIO_000300: 4.62e-1

DP
type: SiteQuality
SIO_000300: 5.5653e5

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.01e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.385e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.39e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2254
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1154
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3394
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6292
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21016
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Other
type: Population
allele count: 1
allele frequency: 3.759398496240601e-3
allele num: 266
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.676e0

VQSLOD
type: SiteQuality
SIO_000300: 2.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.18e-1

DP
type: SiteQuality
SIO_000300: 5.9311e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-2

QD
type: SiteQuality
SIO_000300: 1.667e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 268
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East Asian
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allele count: 0
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allele num: 3112
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South Asian
type: Population
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African
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allele count: 3
allele frequency: 1.282051282051282e-3
allele num: 2340
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1192
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European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.384274640088594e-4
allele num: 21672
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QD
type: SiteQuality
SIO_000300: 6.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

FS
type: SiteQuality
SIO_000300: 3.865e0

DP
type: SiteQuality
SIO_000300: 6.05449e5

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.756e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 268
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2340
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3112
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.614248800295312e-5
allele num: 21672
num of homozygotes: 0

Latino
type: Population
allele count: 0
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South Asian
type: Population
allele count: 0
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allele num: 6426
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MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.865e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.756e-1

DP
type: SiteQuality
SIO_000300: 6.05449e5

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.13e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6650
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.932559178204556e-5
allele num: 22390
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1246
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.65e-2

FS
type: SiteQuality
SIO_000300: 1.26e0

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 6.1649e5

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.94e-1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.286694101508916e-5
allele num: 23328
num of homozygotes: 0

African
type: Population
allele count: 0
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Latino
type: Population
allele count: 0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6830
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3294
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.582e0

DP
type: SiteQuality
SIO_000300: 6.31549e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.61e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.301e0

MQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.79e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2564
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6890
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 278
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.217629692113033e-5
allele num: 23710
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East Asian
type: Population
allele count: 0
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allele num: 3346
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.56e-2

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.769e1

FS
type: SiteQuality
SIO_000300: 3.261e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.55e-1

African
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allele count: 2
allele frequency: 7.535795026375283e-4
allele num: 2654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
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South Asian
type: Population
allele count: 0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24504
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.54e-2

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.24e-1

MQ
type: SiteQuality
SIO_000300: 5.705e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4122
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 2668
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.054163626043947e-5
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7088
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1374
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MQRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.827e0

QD
type: SiteQuality
SIO_000300: 3.11e0

FS
type: SiteQuality
SIO_000300: 6.856e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-2

DP
type: SiteQuality
SIO_000300: 6.52166e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4122
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 4.054163626043947e-5
allele num: 24666
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East Asian
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allele count: 0
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Other
type: Population
allele count: 0
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allele num: 288
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DP
type: SiteQuality
SIO_000300: 6.52166e5

FS
type: SiteQuality
SIO_000300: 6.856e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.827e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

African
type: Population
allele count: 1
allele frequency: 3.725782414307004e-4
allele num: 2684
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European (Finnish)
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3452
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European (Non-Finnish)
type: Population
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South Asian
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Other
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allele count: 0
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allele num: 290
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DP
type: SiteQuality
SIO_000300: 6.53398e5

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.13e-1

FS
type: SiteQuality
SIO_000300: 8.323e0

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-2

MQ
type: SiteQuality
SIO_000300: 5.695e1

Other
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allele count: 0
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allele num: 296
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European (Non-Finnish)
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allele count: 0
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South Asian
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Latino
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African
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East Asian
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.056e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-2

DP
type: SiteQuality
SIO_000300: 6.52417e5

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

East Asian
type: Population
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Latino
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European (Finnish)
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European (Non-Finnish)
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allele count: 1
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South Asian
type: Population
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Other
type: Population
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MQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.44e-2

QD
type: SiteQuality
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DP
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SIO_000300: 6.60225e5

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.808e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.982477100756671e-5
allele num: 25110
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2742
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1434
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VQSLOD
type: SiteQuality
SIO_000300: 2.91e-1

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.907e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.55e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.29e-1

QD
type: SiteQuality
SIO_000300: 1.518e1

MQRankSum
type: SiteQuality
SIO_000300: -7.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7010
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European (Finnish)
type: Population
allele count: 1
allele frequency: 6.993006993006993e-4
allele num: 1430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3566
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24918
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4206
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DP
type: SiteQuality
SIO_000300: 6.36328e5

FS
type: SiteQuality
SIO_000300: 4.083e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.084e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

MQ
type: SiteQuality
SIO_000300: 5.908e1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.56e-2

QD
type: SiteQuality
SIO_000300: 1.184e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1436
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European (Non-Finnish)
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allele count: 1
allele frequency: 4.001920922042581e-5
allele num: 24988
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3560
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2716
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.887e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.539e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.37203e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.427e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.66e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2688
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1374
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.062728528479727e-5
allele num: 24614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.23e0

VQSLOD
type: SiteQuality
SIO_000300: -5.113e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.62e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

DP
type: SiteQuality
SIO_000300: 6.25906e5

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1370
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2676
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4108
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 4.382120946538125e-4
allele num: 6846
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
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FS
type: SiteQuality
SIO_000300: 1.323e0

QD
type: SiteQuality
SIO_000300: 8.289999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.22143e5

MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.69e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.38e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23484
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3956
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.533e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.81e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.06e-1

DP
type: SiteQuality
SIO_000300: 5.96266e5

VQSLOD
type: SiteQuality
SIO_000300: -2.366e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 3.9e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

South Asian
type: Population
allele count: 4
allele frequency: 6.414368184733803e-4
allele num: 6236
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2508
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1232
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 5.78613e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.531e0

MQRankSum
type: SiteQuality
SIO_000300: -3.36e-1

QD
type: SiteQuality
SIO_000300: 7.51e0

VQSLOD
type: SiteQuality
SIO_000300: -7.576000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.93e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
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South Asian
type: Population
allele count: 8
allele frequency: 1.355472721111488e-3
allele num: 5902
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FS
type: SiteQuality
SIO_000300: 2.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.441e0

DP
type: SiteQuality
SIO_000300: 5.54007e5

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.05e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.85e-1

QD
type: SiteQuality
SIO_000300: 1.279e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3012
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.802151363810988e-5
allele num: 20824
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5600
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.477e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

FS
type: SiteQuality
SIO_000300: 2.974e0

VQSLOD
type: SiteQuality
SIO_000300: -1.144e0

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.34e-2

MQ
type: SiteQuality
SIO_000300: 5.936e1

QD
type: SiteQuality
SIO_000300: 6.43e0

DP
type: SiteQuality
SIO_000300: 5.35226e5

European (Finnish)
type: Population
allele count: 2
allele frequency: 2.09643605870021e-3
allele num: 954
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2728
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.044277360066834e-4
allele num: 19152
num of homozygotes: 0

South Asian
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allele count: 0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 224
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

DP
type: SiteQuality
SIO_000300: 5.03796e5

MQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.078e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.49e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 932
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 228
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South Asian
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allele count: 0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2686
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18638
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.65e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

DP
type: SiteQuality
SIO_000300: 5.00328e5

QD
type: SiteQuality
SIO_000300: 1.531e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18510
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South Asian
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allele count: 5
allele frequency: 1.021659174499387e-3
allele num: 4894
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2656
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 914
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

DP
type: SiteQuality
SIO_000300: 4.92052e5

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.58e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.27e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1942
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3026
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2554
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.68e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.24e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.49e-1

DP
type: SiteQuality
SIO_000300: 4.83865e5

ClippingRankSum
type: SiteQuality
SIO_000300: -9.59e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17302
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 836
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African
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allele count: 1
allele frequency: 5.399568034557236e-4
allele num: 1852
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2454
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FS
type: SiteQuality
SIO_000300: 7.318e0

MQ
type: SiteQuality
SIO_000300: 5.899e1

VQSLOD
type: SiteQuality
SIO_000300: -6.711e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.002e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-1

QD
type: SiteQuality
SIO_000300: 1.157e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.47e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.78e-1

DP
type: SiteQuality
SIO_000300: 4.7061e5

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.155935729973414e-4
allele num: 17302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4412
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2910
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.002e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.47e-2

FS
type: SiteQuality
SIO_000300: 7.318e0

QD
type: SiteQuality
SIO_000300: 1.157e1

MQ
type: SiteQuality
SIO_000300: 5.899e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.78e-1

DP
type: SiteQuality
SIO_000300: 4.7061e5

VQSLOD
type: SiteQuality
SIO_000300: -6.711e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

South Asian
type: Population
allele count: 0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16114
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 7.31528895391368e-4
allele num: 2734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
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allele num: 790
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2312
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.08e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

FS
type: SiteQuality
SIO_000300: 5.876e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.34e1

DP
type: SiteQuality
SIO_000300: 4.5159e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15762
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2244
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South Asian
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allele frequency: 0.0e0
allele num: 3998
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VQSLOD
type: SiteQuality
SIO_000300: -1.021e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.16e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.572e1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

Other
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allele frequency: 0.0e0
allele num: 176
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European (Finnish)
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allele frequency: 0.0e0
allele num: 720
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African
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East Asian
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Latino
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South Asian
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.25e-2

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 4.37995e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

European (Finnish)
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allele frequency: 0.0e0
allele num: 674
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
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East Asian
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allele frequency: 0.0e0
allele num: 2030
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European (Non-Finnish)
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allele frequency: 6.892748828232699e-5
allele num: 14508
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MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.3e0

QD
type: SiteQuality
SIO_000300: 6.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.42e-2

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.392e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1956
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 156
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 14204
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 670
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South Asian
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allele count: 0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2448
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MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.47e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.22e-1

DP
type: SiteQuality
SIO_000300: 4.21307e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.486e1

European (Non-Finnish)
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allele count: 1
allele frequency: 7.227522405319457e-5
allele num: 13836
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 1404
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2368
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Other
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allele num: 144
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East Asian
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allele num: 1862
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MQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.59e-2

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 4.15602e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.134e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2288
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 13298
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African
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South Asian
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allele frequency: 2.9708853238265e-4
allele num: 3366
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Other
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East Asian
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DP
type: SiteQuality
SIO_000300: 4.09085e5

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.71e-2

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.041e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

Other
type: Population
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allele num: 72
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African
type: Population
allele count: 0
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allele num: 692
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 1894
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.049676025917927e-4
allele num: 7408
num of homozygotes: 0

East Asian
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DP
type: SiteQuality
SIO_000300: 3.18953e5

VQSLOD
type: SiteQuality
SIO_000300: 2.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.21e-1

FS
type: SiteQuality
SIO_000300: 1.138e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.22e-2

MQ
type: SiteQuality
SIO_000300: 5.787e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
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Other
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allele count: 0
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allele num: 72
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South Asian
type: Population
allele count: 0
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allele num: 1894
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ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.22e-2

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -5.21e-1

MQ
type: SiteQuality
SIO_000300: 5.787e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

FS
type: SiteQuality
SIO_000300: 1.138e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1668
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 678
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5944
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 508
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.434e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
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SIO_000300: 2.98248e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.25e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.221e0

VQSLOD
type: SiteQuality
SIO_000300: 4.1e0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.852537977028529e-4
allele num: 5398
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 280
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1628
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 462
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 7.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 9.529999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.33e-2

DP
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.439e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

Other
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allele num: 66
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East Asian
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allele count: 0
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allele num: 612
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South Asian
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allele frequency: 0.0e0
allele num: 1628
num of homozygotes: 0

Latino
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allele count: 0
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allele num: 874
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 7.85e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.439e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
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DP
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QD
type: SiteQuality
SIO_000300: 9.529999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.33e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 268
num of homozygotes: 0

African
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allele num: 446
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Other
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South Asian
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Latino
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allele frequency: 0.0e0
allele num: 836
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.924557351809084e-4
allele num: 5196
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.42e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

FS
type: SiteQuality
SIO_000300: 6.923e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.276e0

QD
type: SiteQuality
SIO_000300: 8.07e0

MQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.25e-1

MQ
type: SiteQuality
SIO_000300: 5.787e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
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Other
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allele count: 0
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African
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allele frequency: 0.0e0
allele num: 418
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.050020500205002e-4
allele num: 4878
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East Asian
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allele count: 0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
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DP
type: SiteQuality
SIO_000300: 2.83838e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.028e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -5.69e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.52e-2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.15610176800345e-4
allele num: 4638
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South Asian
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allele frequency: 6.684491978609625e-4
allele num: 1496
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African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 530
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Latino
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Other
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allele count: 0
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FS
type: SiteQuality
SIO_000300: 2.963e0

VQSLOD
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QD
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

DP
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

Other
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allele count: 0
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African
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East Asian
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allele frequency: 0.0e0
allele num: 494
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European (Non-Finnish)
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European (Finnish)
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South Asian
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

FS
type: SiteQuality
SIO_000300: 8.451000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
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VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.56e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1388
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.808e0

QD
type: SiteQuality
SIO_000300: 2.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.78355e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.65e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.964e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -9.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.204819277108434e-3
allele num: 4150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.443001443001443e-3
allele num: 1386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.57e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.179e0

QD
type: SiteQuality
SIO_000300: 1.095e1

DP
type: SiteQuality
SIO_000300: 2.79386e5

FS
type: SiteQuality
SIO_000300: 5.877e0

VQSLOD
type: SiteQuality
SIO_000300: -9.376e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.505e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.402e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.54e-2

DP
type: SiteQuality
SIO_000300: 2.83228e5

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.55e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.82955e5

QD
type: SiteQuality
SIO_000300: 1.487e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.96e-1

DP
type: SiteQuality
SIO_000300: 2.85252e5

MQ
type: SiteQuality
SIO_000300: 5.705e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.31e-2

QD
type: SiteQuality
SIO_000300: 8.09e0