1-76253248-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253248
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253248
    reference: chr 1
allele count: 1
allele frequency: 8.249463784853985e-6
allele num: 121220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.330G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.68G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.285G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.41G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.233G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.114G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.70G>T
  hgvsp: ENSP00000359862.3:p.Ala24Ser
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-648G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117054
  ensembl protein: ENSP00000434284
  ensembl transcript: ENST00000528016
  gene symbol: ACADM
  hgvsc: ENST00000528016.1:c.*330G>T
  variant of: http://identifiers.org/hgnc/89
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.70G>T
  hgvsp: ENSP00000317473.3:p.Ala24Ser
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.99G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.212G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.863G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.145G>T
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19069
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20086
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala24Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-76253251-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253251
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253251
    reference: chr 1
allele count: 1
allele frequency: 8.250280509537325e-6
allele num: 121208
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.73G>A
  hgvsp: ENSP00000359862.3:p.Asp25Asn
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.73G>A
  hgvsp: ENSP00000317473.3:p.Asp25Asn
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.215G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.866G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.44G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.71G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-645G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117054
  ensembl protein: ENSP00000434284
  ensembl transcript: ENST00000528016
  gene symbol: ACADM
  hgvsc: ENST00000528016.1:c.*333G>A
  variant of: http://identifiers.org/hgnc/89
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.288G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.236G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.102G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.333G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.148G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.117G>A
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20069
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp25Asn
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

1-76253254-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253254
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253254
    reference: chr 1
allele count: 3
allele frequency: 2.475165836111019e-5
allele num: 121204
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-642T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.291T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.336T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.218T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.239T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.76T>C
  hgvsp: ENSP00000359862.3:p.Tyr26His
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.74T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.76T>C
  hgvsp: ENSP00000317473.3:p.Tyr26His
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.869T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.151T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.105T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.47T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117054
  ensembl protein: ENSP00000434284
  ensembl transcript: ENST00000528016
  gene symbol: ACADM
  hgvsc: ENST00000528016.1:c.*336T>C
  variant of: http://identifiers.org/hgnc/89
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.120T>C
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr26His
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

1-76253259-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253259
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253259
    reference: chr 1
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.341C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.52C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.79C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.125C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.110C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.874C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.81C>T
  hgvsp: ENST00000370826.3:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-637C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117054
  ensembl protein: ENSP00000434284
  ensembl transcript: ENST00000528016
  gene symbol: ACADM
  hgvsc: ENST00000528016.1:c.*341C>T
  variant of: http://identifiers.org/hgnc/89
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.223C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.81C>T
  hgvsp: ENST00000319942.3:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.244C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.296C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.156C>T
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile27Ile
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

1-76253260-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253260
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253260
    reference: chr 1
allele count: 1
allele frequency: 8.252595441266279e-6
allele num: 121174
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-636G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.875G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.82G>T
  hgvsp: ENSP00000359862.3:p.Ala28Ser
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.342G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.245G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.82G>T
  hgvsp: ENSP00000317473.3:p.Ala28Ser
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000117054
  ensembl protein: ENSP00000434284
  ensembl transcript: ENST00000528016
  gene symbol: ACADM
  hgvsc: ENST00000528016.1:c.*342G>T
  variant of: http://identifiers.org/hgnc/89
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.80G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.53G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.224G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.297G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.111G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.157G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.126G>T
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19039
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala28Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

1-76253267-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253267
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253267
    reference: chr 1
allele count: 1
allele frequency: 8.254230293025175e-6
allele num: 121150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.60A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.89A>G
  hgvsp: ENSP00000317473.3:p.Tyr30Cys
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.231A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.133A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.118A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-629A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.349A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.89A>G
  hgvsp: ENSP00000359862.3:p.Tyr30Cys
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.304A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.164A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.87A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.882A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.252A>G
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr30Cys
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

1-76253269-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253269
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253269
    reference: chr 1
allele count: 1
allele frequency: 8.255047961828658e-6
allele num: 121138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.884G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.89G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.306G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.120G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.62G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-627G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.166G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.351G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.91G>T
  hgvsp: ENSP00000359862.3:p.Gly31Cys
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.91G>T
  hgvsp: ENSP00000317473.3:p.Gly31Cys
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.254G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.233G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.135G>T
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly31Cys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

1-76253270-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253270
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253270
    reference: chr 1
allele count: 1
allele frequency: 8.256002113536541e-6
allele num: 121124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-626G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.90G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.63G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.167G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.234G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.307G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.92G>T
  hgvsp: ENSP00000359862.3:p.Gly31Val
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.92G>T
  hgvsp: ENSP00000317473.3:p.Gly31Val
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.352G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.136G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.885G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.255G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.121G>T
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly31Val
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

1-76253276-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253276
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253276
    reference: chr 1
allele count: 2
allele frequency: 1.651664051531918e-5
allele num: 121090
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.69A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-620A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.358A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.96A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.142A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.98A>G
  hgvsp: ENSP00000359862.3:p.Lys33Arg
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.98A>G
  hgvsp: ENSP00000317473.3:p.Lys33Arg
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.127A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.240A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.261A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.173A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.313A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.891A>G
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys33Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ

1-76253282-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253282
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253282
    reference: chr 1
allele count: 1
allele frequency: 8.266102367411717e-6
allele num: 120976
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.104A>G
  hgvsp: ENSP00000317473.3:p.Asp35Gly
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-614A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.102A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.267A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.104A>G
  hgvsp: ENSP00000359862.3:p.Asp35Gly
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.148A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.179A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.75A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.319A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.897A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.364A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.133A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.246A>G
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp35Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

1-76253298-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253298
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253298
    reference: chr 1
allele count: 3
allele frequency: 2.488717812582957e-5
allele num: 120544
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+9A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+9A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+9A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+9A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+9A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+9A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+9A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.195A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.149A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+9A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+9A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+9A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+9A>G
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

1-76253299-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253299
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253300
    reference: chr 1
allele count: 2
allele frequency: 1.659999004000598e-5
allele num: 120482
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+17dupT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+17dupT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+17dupT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+17dupT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+17dupT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+17dupT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+17dupT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+17dupT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.157dupT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+17dupT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+17dupT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.203dupT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+17dupT
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS

1-76253306-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253306
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253306
    reference: chr 1
allele count: 1
allele frequency: 8.328752519447637e-6
allele num: 120066
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+17T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+17T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+17T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+17T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+17T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.157T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+17T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.203T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+17T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+17T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+17T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+17T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+17T>A
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ

1-76253306-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253306
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253306
    reference: chr 1
allele count: 1
allele frequency: 8.328752519447637e-6
allele num: 120066
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+17T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+17T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.203T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+17T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+17T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+17T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+17T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+17T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+17T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+17T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.157T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+17T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+17T>C
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

1-76253307-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253307
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253307
    reference: chr 1
allele count: 7
allele frequency: 5.833041681249271e-5
allele num: 120006
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+18A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+18A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+18A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+18A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+18A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+18A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+18A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+18A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.158A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+18A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.204A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+18A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+18A>G
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

1-76253313-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253313
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253313
    reference: chr 1
allele count: 1
allele frequency: 8.352404657300837e-6
allele num: 119726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+24G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.210G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+24G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+24G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+24G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.164G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+24G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+24G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+24G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+24G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+24G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+24G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+24G>T
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

1-76253314-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253314
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253314
    reference: chr 1
allele count: 1
allele frequency: 8.353660574063554e-6
allele num: 119708
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+25A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+25A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+25A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.165A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+25A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.211A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+25A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+25A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+25A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+25A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+25A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+25A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+25A>G
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

1-76253325-TAAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253325
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253322
    reference: chr 1
allele count: 1
allele frequency: 8.388980235562565e-6
allele num: 119204
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.177_179delAAA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+37_109+39delAAA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+37_904+39delAAA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+37_274+39delAAA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+37_-607+39delAAA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+37_111+39delAAA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+37_111+39delAAA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+37_371+39delAAA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.223_225delAAA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+37_155+39delAAA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+37_82+39delAAA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+37_326+39delAAA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+37_253+39delAAA
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3798
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: TAAA
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-76253326-AAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253326
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253323
    reference: chr 1
allele count: 3
allele frequency: 2.516060855125216e-5
allele num: 119234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+41_109+43delAAG
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+41_111+43delAAG
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.227_229delAAG
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+41_155+43delAAG
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+41_326+43delAAG
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+41_371+43delAAG
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+41_111+43delAAG
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.181_183delAAG
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+41_253+43delAAG
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+41_-607+43delAAG
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+41_274+43delAAG
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+41_904+43delAAG
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+41_82+43delAAG
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6588
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15482
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8701
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4904
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: AAAG
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-76253327-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253327
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253327
    reference: chr 1
allele count: 1
allele frequency: 8.393627557957998e-6
allele num: 119138
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+38A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+38A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+38A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+38A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+38A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+38A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+38A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.224A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.178A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+38A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+38A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+38A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+38A>G
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12103
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4898
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD

1-76253339-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253339
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253339
    reference: chr 1
allele count: 1
allele frequency: 8.496609852668785e-6
allele num: 117694
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.190A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+50A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+50A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+50A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+50A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+50A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+50A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.236A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+50A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+50A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+50A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+50A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+50A>G
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8507
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

1-76253340-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253340
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253340
    reference: chr 1
allele count: 1
allele frequency: 8.513826454161559e-6
allele num: 117456
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+51G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+51G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+51G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.191G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.237G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+51G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+51G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+51G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+51G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+51G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+51G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+51G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+51G>C
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7864
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12681
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

1-76253537-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253537
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253537
    reference: chr 1
allele count: 1
allele frequency: 1.113312996815925e-5
allele num: 89822
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+248G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.388G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+248G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.434G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+248G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+248G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+248G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+248G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+248G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+248G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+248G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+248G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+248G>A
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12455
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9998
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5824
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17046
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

1-76253538-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253538
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253538
    reference: chr 1
allele count: 1
allele frequency: 1.109065501408513e-5
allele num: 90166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+249G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+249G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+249G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+249G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.435G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+249G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+249G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.389G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+249G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+249G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+249G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+249G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+249G>A
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12099
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10005
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-76253542-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253542
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253542
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 90604
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+253T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+253T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+253T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+253T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+253T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+253T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+253T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+253T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+253T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+253T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+253T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.439T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.393T>G
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10829
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9933
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD

1-76253561-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253561
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253561
    reference: chr 1
allele count: 2
allele frequency: 2.124721130351641e-5
allele num: 94130
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+272G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+272G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+272G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+272G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+272G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+272G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.458G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.412G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+272G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+272G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+272G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+272G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+272G>T
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4937
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28743
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

1-76253563-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253563
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253563
    reference: chr 1
allele count: 1
allele frequency: 1.058380254857965e-5
allele num: 94484
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.460A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+274A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+274A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+274A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+274A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+274A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+274A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+274A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+274A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+274A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+274A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.414A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+274A>T
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

1-76253575-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253575
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253575
    reference: chr 1
allele count: 1
allele frequency: 1.040842666222574e-5
allele num: 96076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+286G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+286G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+286G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+286G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+286G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.426G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+286G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+286G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+286G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.2G>A
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+286G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.472G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+286G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+286G>A
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7797
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD

1-76253579-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253579
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253579
    reference: chr 1
allele count: 1
allele frequency: 1.034404286571363e-5
allele num: 96674
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+290A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+290A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+290A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+290A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.430A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+290A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.6A>G
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.476A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+290A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+290A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+290A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+290A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+290A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+290A>G
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2864
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31372
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

1-76253580-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253580
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253580
    reference: chr 1
allele count: 4
allele frequency: 4.133256179217988e-5
allele num: 96776
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+291T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+291T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+291T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+291T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+291T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+291T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+291T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+291T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+291T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.431T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.477T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+291T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.7T>G
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+291T>G
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10339
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31501
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-76253584-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253584
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253584
    reference: chr 1
allele count: 1
allele frequency: 1.029950974333622e-5
allele num: 97092
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+295G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+295G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+295G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.11G>A
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.435G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+295G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+295G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+295G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+295G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.481G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+295G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+295G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+295G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+295G>A
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

1-76253585-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253585
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253585
    reference: chr 1
allele count: 1
allele frequency: 1.028721915891696e-5
allele num: 97208
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.436T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+296T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+296T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.12T>A
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+296T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+296T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.482T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+296T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+296T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+296T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+296T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+296T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+296T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+296T>A
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31879
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-76253589-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253589
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253589
    reference: chr 1
allele count: 1
allele frequency: 1.025851456709069e-5
allele num: 97480
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+300G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+300G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+300G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+300G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+300G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+300G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.16G>A
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+300G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+300G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.440G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.486G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+300G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+300G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+300G>A
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

1-76253589-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253589
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253589
    reference: chr 1
allele count: 2
allele frequency: 2.051702913418137e-5
allele num: 97480
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+300G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.486G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+300G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+300G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.16G>C
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+300G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+300G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+300G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.440G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+300G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+300G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+300G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+300G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+300G>C
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP

1-76253594-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253594
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253594
    reference: chr 1
allele count: 2
allele frequency: 2.050693134279386e-5
allele num: 97528
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+305G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+305G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+305G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+305G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+305G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+305G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+305G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+305G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+305G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.491G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+305G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.445G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.21G>T
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+305G>T
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7052
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-76253598-TATC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253598
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253595
    reference: chr 1
allele count: 1
allele frequency: 1.031097913057824e-5
allele num: 96984
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+310_111+312delATC
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+310_253+312delATC
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+310_371+312delATC
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.26_28delATC
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+310_274+312delATC
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+310_109+312delATC
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+310_111+312delATC
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+310_-607+312delATC
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+310_155+312delATC
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+310_82+312delATC
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.496_498delATC
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.450_452delATC
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+310_326+312delATC
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+310_904+312delATC
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: TATC
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-76253599-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253599
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253599
    reference: chr 1
allele count: 7
allele frequency: 7.214412334583831e-5
allele num: 97028
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.496A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+310A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.26A>G
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+310A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.450A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+310A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+310A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+310A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+310A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+310A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+310A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+310A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+310A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+310A>G
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31270
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

1-76253603-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253603
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253603
    reference: chr 1
allele count: 2
allele frequency: 2.065774252189721e-5
allele num: 96816
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+314G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.30G>T
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+314G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.500G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+314G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+314G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+314G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.454G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+314G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+314G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+314G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+314G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+314G>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+314G>T
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

1-76253607-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253607
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253607
    reference: chr 1
allele count: 289
allele frequency: 2.995812082763196e-3
allele num: 96468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+318C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+318C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+318C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+318C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+318C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.504C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+318C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.458C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+318C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+318C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+318C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+318C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.34C>T
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+318C>T
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10975
  bin: 2.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 1.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 30467
  bin: 2.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 3.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 1.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 3.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/1-76253609-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253609
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253609
    reference: chr 1
allele count: 1
allele frequency: 1.040084870925467e-5
allele num: 96146
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+320A>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.506A>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+320A>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+320A>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+320A>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+320A>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+320A>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+320A>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.36A>C
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+320A>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.460A>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+320A>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+320A>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+320A>C
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

1-76253613-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253613
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253613
    reference: chr 1
allele count: 8
allele frequency: 8.369076263207448e-5
allele num: 95590
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.40C>T
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+324C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+324C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+324C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+324C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+324C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+324C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.464C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+324C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.510C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+324C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+324C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+324C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+324C>T
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7751
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29669
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/1-76253627-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253627
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253627
    reference: chr 1
allele count: 1
allele frequency: 1.085823488533704e-5
allele num: 92096
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+338C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+338C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+338C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+338C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+338C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.478C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.524C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+338C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+338C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+338C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+338C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+338C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.54C>A
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+338C>A
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9005
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26036
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

1-76253628-ACTTTAGCTCTAGAATTACT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253628
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253609
    reference: chr 1
allele count: 1
allele frequency: 1.085658451851048e-5
allele num: 92110
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9036
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: ACTTTAGCTCTAGAATTACT
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ

1-76253630-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253630
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253630
    reference: chr 1
allele count: 1
allele frequency: 1.092466352036357e-5
allele num: 91536
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.57T>C
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+341T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+341T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+341T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+341T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.527T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+341T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.481T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+341T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+341T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+341T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+341T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+341T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+341T>C
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5623
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
reference allele: T
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

1-76253632-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253632
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253632
    reference: chr 1
allele count: 2
allele frequency: 2.198913736614113e-5
allele num: 90954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+343T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.483T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.59T>C
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+343T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+343T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+343T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+343T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+343T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+343T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.529T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+343T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+343T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+343T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+343T>C
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5943
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25042
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

1-76253649-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253649
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253649
    reference: chr 1
allele count: 5
allele frequency: 6.030926591561527e-5
allele num: 82906
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.500T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+360T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+360T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+360T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.546T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+360T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+360T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+360T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+360T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000207241
  ensembl transcript: ENST00000384512
  gene symbol: SNORD45A
  hgvsc: ENST00000384512.1:n.76T>C
  variant of: http://identifiers.org/hgnc/10184
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+360T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+360T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+360T>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+360T>C
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10882
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12050
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16816
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9469
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

1-76253671-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253671
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253671
    reference: chr 1
allele count: 13
allele frequency: 1.848376272535972e-4
allele num: 70332
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.568C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+382C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+382C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+382C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.522C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+382C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+382C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+382C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+382C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+382C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+382C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+382C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+382C>G
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5895
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17085
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14549
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7574
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

1-76253676-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253676
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253676
    reference: chr 1
allele count: 1
allele frequency: 1.540357362908195e-5
allele num: 64920
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+387A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+387A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+387A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+387A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+387A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+387A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+387A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.527A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.573A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+387A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+387A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+387A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+387A>T
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17861
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5053
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8631
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

1-76253681-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253681
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253681
    reference: chr 1
allele count: 1
allele frequency: 1.598669906637678e-5
allele num: 62552
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+392T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+392T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+392T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.532T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+392T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+392T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+392T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+392T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+392T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+392T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.578T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+392T>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+392T>A
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9458
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-76253688-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253688
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253688
    reference: chr 1
allele count: 35
allele frequency: 6.050548006776614e-4
allele num: 57846
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+399C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+399C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+399C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+399C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+399C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.539C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+399C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.585C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+399C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+399C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+399C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+399C>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+399C>T
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 16495
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16449
  bin: 7.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 10498
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP

1-76253689-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253689
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253689
    reference: chr 1
allele count: 1
allele frequency: 1.747213194954048e-5
allele num: 57234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+400G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.586G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+400G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+400G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+400G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+400G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+400G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+400G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+400G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+400G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.540G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+400G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+400G>C
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10654
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16367
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5809
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum

1-76253703-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76253703
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76253703
    reference: chr 1
allele count: 1
allele frequency: 2.007951487892052e-5
allele num: 49802
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.326+414G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-607+414G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.155+414G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.253+414G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.109+414G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.82+414G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.111+414G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000497648
  gene symbol: RABGGTB
  hgvsc: ENST00000497648.1:n.554G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.600G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.274+414G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.111+414G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.371+414G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.904+414G>A
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10960
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19357
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-76254796-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76254796
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76254796
    reference: chr 1
allele count: 1
allele frequency: 8.354498061756449e-6
allele num: 119696
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.1693T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.156-841T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-606-48T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.372-48T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.327-48T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.905-48T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.110-48T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.254-48T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.275-48T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.112-48T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.112-48T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.83-48T>G
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4984
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

1-76254805-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76254805
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76254805
    reference: chr 1
allele count: 5
allele frequency: 4.173483356148376e-5
allele num: 119804
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.83-39G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-606-39G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.1702G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.275-39G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.112-39G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.327-39G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.112-39G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.254-39G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.156-832G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.372-39G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.110-39G>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.905-39G>A
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6687
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10837
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13152
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13430
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

1-76254811-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76254811
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76254811
    reference: chr 1
allele count: 1
allele frequency: 8.335000333400014e-6
allele num: 119976
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.327-33A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.275-33A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-606-33A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.254-33A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.110-33A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.1708A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.905-33A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.112-33A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.372-33A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.112-33A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.156-826A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.83-33A>G
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6708
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

1-76254820-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76254820
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76254820
    reference: chr 1
allele count: 16
allele frequency: 1.329080276448698e-4
allele num: 120384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.112-24T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.275-24T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.254-24T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-606-24T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.110-24T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.372-24T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.83-24T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.1717T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.112-24T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.905-24T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.156-817T>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.327-24T>G
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14277
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15423
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD

1-76254824-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76254824
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76254823
    reference: chr 1
allele count: 1
allele frequency: 8.294900295298451e-6
allele num: 120556
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-606-17delA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.372-17delA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.1724delA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.112-17delA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.327-17delA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.156-810delA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.905-17delA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.110-17delA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.254-17delA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.275-17delA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.112-17delA
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.83-17delA
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6724
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: GA
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

1-76254827-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76254827
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76254827
    reference: chr 1
allele count: 1
allele frequency: 8.285553309249991e-6
allele num: 120692
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.112-17A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.1724A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.275-17A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.110-17A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.156-810A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-606-17A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.254-17A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.905-17A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.327-17A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.112-17A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.372-17A>T
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.83-17A>T
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6727
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

1-76254828-T-TTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76254828
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76254830
    reference: chr 1
allele count: 32
allele frequency: 2.650893848269463e-4
allele num: 120714
alternate allele: TTG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.275-12_275-11dupGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.905-12_905-11dupGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.327-12_327-11dupGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.112-12_112-11dupGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.110-12_110-11dupGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.1729_1730dupGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.156-805_156-804dupGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.372-12_372-11dupGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.83-12_83-11dupGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-606-12_-606-11dupGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.254-12_254-11dupGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.112-12_112-11dupGT
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11189
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6725
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14509
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15888
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

1-76254828-TTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76254828
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76254826
    reference: chr 1
allele count: 1
allele frequency: 8.284043275842073e-6
allele num: 120714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.1729_1730delGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.83-12_83-11delGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.254-12_254-11delGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.112-12_112-11delGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.372-12_372-11delGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.156-805_156-804delGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.327-12_327-11delGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.905-12_905-11delGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.110-12_110-11delGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-606-12_-606-11delGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.112-12_112-11delGT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.275-12_275-11delGT
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: TTG
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

1-76254832-GTAT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76254832
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76254829
    reference: chr 1
allele count: 6
allele frequency: 4.964832436905254e-5
allele num: 120850
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.156-800_156-798delATT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.327-7_327-5delATT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.372-7_372-5delATT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.1734_1736delATT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.275-7_275-5delATT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-606-7_-606-5delATT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.112-7_112-5delATT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.112-7_112-5delATT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.110-7_110-5delATT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.254-7_254-5delATT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.905-7_905-5delATT
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.83-7_83-5delATT
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11229
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6731
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: GTAT
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

1-76254834-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76254834
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76254834
    reference: chr 1
allele count: 1
allele frequency: 8.271709100534353e-6
allele num: 120894
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.254-10A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.112-10A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.327-10A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.156-803A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.110-10A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.112-10A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.83-10A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.372-10A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-606-10A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.1731A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.275-10A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.905-10A>G
  variant of: http://identifiers.org/hgnc/9796
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-76254849-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76254849
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76254849
    reference: chr 1
allele count: 2
allele frequency: 1.649348507339601e-5
allele num: 121260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.115C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.117C>A
  hgvsp: ENSP00000359862.3:p.Tyr39Ter
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.280C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.332C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.156-788C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.377C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.1746C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.88C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-601C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.117C>A
  hgvsp: ENSP00000317473.3:p.Tyr39Ter
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.910C>A
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.259C>A
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr39Ter
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

1-76254873-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76254873
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76254873
    reference: chr 1
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.141G>C
  hgvsp: ENSP00000317473.3:p.Met47Ile
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.156-764G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.934G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.139G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.141G>C
  hgvsp: ENSP00000359862.3:p.Met47Ile
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.401G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.356G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.112G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.304G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.1770G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.283G>C
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-577G>C
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met47Ile
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

1-76254879-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76254879
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76254879
    reference: chr 1
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.940C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.310C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.407C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.118C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.147C>G
  hgvsp: ENST00000319942.3:c.147C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.362C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.289C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.1776C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-571C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.145C>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.147C>G
  hgvsp: ENST00000370826.3:c.147C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.156-758C>G
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly49Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

1-76254880-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 76254880
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 76254880
    reference: chr 1
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000485459
  gene symbol: RABGGTB
  hgvsc: ENST00000485459.1:n.156-757A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000496055
  gene symbol: RABGGTB
  hgvsc: ENST00000496055.1:n.1777A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000489450
  gene symbol: RABGGTB
  hgvsc: ENST00000489450.1:n.119A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000461653
  gene symbol: RABGGTB
  hgvsc: ENST00000461653.1:n.146A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000440452
  ensembl transcript: ENST00000535300
  gene symbol: RABGGTB
  hgvsc: ENST00000535300.1:c.-570A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000317473
  ensembl transcript: ENST00000319942
  gene symbol: RABGGTB
  hgvsc: ENST00000319942.3:c.148A>G
  hgvsp: ENSP00000317473.3:p.Ile50Val
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137955
  ensembl protein: ENSP00000359862
  ensembl transcript: ENST00000370826
  gene symbol: RABGGTB
  hgvsc: ENST00000370826.3:c.148A>G
  hgvsp: ENSP00000359862.3:p.Ile50Val
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000471759
  gene symbol: RABGGTB
  hgvsc: ENST00000471759.1:n.941A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000491266
  gene symbol: RABGGTB
  hgvsc: ENST00000491266.1:n.408A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000473406
  gene symbol: RABGGTB
  hgvsc: ENST00000473406.1:n.290A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000470201
  gene symbol: RABGGTB
  hgvsc: ENST00000470201.1:n.311A>G
  variant of: http://identifiers.org/hgnc/9796
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137955
  ensembl transcript: ENST00000462042
  gene symbol: RABGGTB
  hgvsc: ENST00000462042.1:n.363A>G
  variant of: http://identifiers.org/hgnc/9796
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile50Val
num of homozygotes: 0
reference allele: A

GenotypeDepth
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 386
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 813
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9605
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 261
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7331
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8201
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33551
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1433
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3564
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2837
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500690317546071e-5
allele num: 66636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

DP
type: SiteQuality
SIO_000300: 1.902384e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.46e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.52e-1

FS
type: SiteQuality
SIO_000300: 8.43e-1

QD
type: SiteQuality
SIO_000300: 1.144e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.258e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

GenotypeDepth
all individuals: 593
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9605
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 386
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 311
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 437
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3881
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8199
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2832
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33528
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1433
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3563
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7330
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 4.15e0

DP
type: SiteQuality
SIO_000300: 1.902136e6

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.37e-1

QD
type: SiteQuality
SIO_000300: 1.225e1

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

GenotypeDepth
all individuals: 486
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 386
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 774
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3881
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 437
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2831
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8197
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33533
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7331
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3565
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.0016509079994e-5
allele num: 66630
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

DP
type: SiteQuality
SIO_000300: 1.90211e6

VQSLOD
type: SiteQuality
SIO_000300: 8.129999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

FS
type: SiteQuality
SIO_000300: 3.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.42e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e-1

GenotypeDepth
all individuals: 774
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19045
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3882
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 592
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 386
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 814
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7328
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3563
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33483
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8188
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2829
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.983e1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.0e-3

DP
type: SiteQuality
SIO_000300: 1.901448e6

FS
type: SiteQuality
SIO_000300: 1.656e0

QD
type: SiteQuality
SIO_000300: 1.334e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.48e-1

GenotypeDepth
all individuals: 814
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 774
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9603
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3882
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 592
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 437
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2827
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8184
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33442
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3563
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7329
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.157e0

DP
type: SiteQuality
SIO_000300: 1.900998e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.948e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

QD
type: SiteQuality
SIO_000300: 9.289999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

GenotypeDepth
all individuals: 3882
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 592
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 437
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19989
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8177
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33438
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7329
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3562
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2828
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501501501501501e-5
allele num: 66600
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.14e-1

DP
type: SiteQuality
SIO_000300: 1.900365e6

QD
type: SiteQuality
SIO_000300: 1.404e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.948e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeDepth
all individuals: 78
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3880
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 437
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1926
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8173
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33414
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7328
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3559
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2828
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.861e0

FS
type: SiteQuality
SIO_000300: 1.298e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.405e1

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.682e-1

DP
type: SiteQuality
SIO_000300: 1.900062e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.892e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 437
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3882
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 386
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3557
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33394
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8171
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7328
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2828
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.064281382656155e-5
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.899885e6

FS
type: SiteQuality
SIO_000300: 1.305e0

QD
type: SiteQuality
SIO_000300: 1.431e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.616e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.197e0

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

GenotypeDepth
all individuals: 813
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1142
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 262
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 97
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3557
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7329
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 58
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2823
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33321
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8166
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.316423442205235e-4
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.7e-2

DP
type: SiteQuality
SIO_000300: 1.898984e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.68e-1

FS
type: SiteQuality
SIO_000300: 5.415e0

QD
type: SiteQuality
SIO_000300: 1.389e1

MQ
type: SiteQuality
SIO_000300: 5.914e1

GenotypeDepth
all individuals: 311
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 773
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1925
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3553
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33069
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2821
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8131
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7327
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504121292341014e-5
allele num: 66484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.369e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.404e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

MQRankSum
type: SiteQuality
SIO_000300: -1.879e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-1

DP
type: SiteQuality
SIO_000300: 1.896234e6

GenotypeDepth
all individuals: 409
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 437
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 458
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7328
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2807
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2437
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3548
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8060
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32232
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1431
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.824817518248175e-4
allele num: 16440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66182
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-2

FS
type: SiteQuality
SIO_000300: 2.606e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.79e-1

DP
type: SiteQuality
SIO_000300: 1.885845e6

MQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

QD
type: SiteQuality
SIO_000300: 1.226e1

GenotypeDepth
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 437
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1143
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1036
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2435
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8042
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3547
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1430
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32052
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7327
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2806
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511670093118878e-5
allele num: 66152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16144018583043e-4
allele num: 8610
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.054e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

DP
type: SiteQuality
SIO_000300: 1.88455e6

MQRankSum
type: SiteQuality
SIO_000300: 4.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.79e-1

QD
type: SiteQuality
SIO_000300: 1.035e1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

FS
type: SiteQuality
SIO_000300: 6.053e0

GenotypeDepth
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 437
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 261
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30755
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1429
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1604
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2430
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7966
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3542
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7327
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2798
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517957436473481e-5
allele num: 65878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.869458e6

MQRankSum
type: SiteQuality
SIO_000300: -1.078e0

VQSLOD
type: SiteQuality
SIO_000300: -1.457e-1

QD
type: SiteQuality
SIO_000300: 1.397e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e0

FS
type: SiteQuality
SIO_000300: 2.076e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 386
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 310
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1604
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30755
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7327
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2798
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1429
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7966
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2430
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3542
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517957436473481e-5
allele num: 65878
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.078e0

QD
type: SiteQuality
SIO_000300: 1.397e1

FS
type: SiteQuality
SIO_000300: 2.076e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e0

VQSLOD
type: SiteQuality
SIO_000300: -1.457e-1

DP
type: SiteQuality
SIO_000300: 1.869458e6

GenotypeDepth
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9464
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3859
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2431
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30480
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3541
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7329
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 512
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7954
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2795
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1429
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.073858114674441e-5
allele num: 65856
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.809691975671964e-5
allele num: 10194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.028467595396729e-4
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.25e-1

DP
type: SiteQuality
SIO_000300: 1.86675e6

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 2.054e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.37e0

QD
type: SiteQuality
SIO_000300: 1.688e1

GenotypeDepth
all individuals: 3324
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 310
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9375
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28412
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2320
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7322
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 184
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2757
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7780
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3529
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522487134983709e-5
allele num: 65682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.47e-1

DP
type: SiteQuality
SIO_000300: 1.845709e6

QD
type: SiteQuality
SIO_000300: 1.085e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.455e0

FS
type: SiteQuality
SIO_000300: 5.027e0

MQRankSum
type: SiteQuality
SIO_000300: 5.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.93e-1

GenotypeDepth
all individuals: 17858
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 386
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2761
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7777
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2397
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2419
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3531
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28048
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7322
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 167
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.109481915933529e-5
allele num: 16368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.88e1

VQSLOD
type: SiteQuality
SIO_000300: -9.674e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.467e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.715e1

MQRankSum
type: SiteQuality
SIO_000300: 4.34e-1

DP
type: SiteQuality
SIO_000300: 1.841272e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.92e0

GenotypeDepth
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 310
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8726
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2747
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3109
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7319
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1031
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3084
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2411
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7195
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2710
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21092
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3500
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1629
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530268715186387e-5
allele num: 65348
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10106
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.782269e6

MQ
type: SiteQuality
SIO_000300: 5.568e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

VQSLOD
type: SiteQuality
SIO_000300: 9.340000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.681e1

MQRankSum
type: SiteQuality
SIO_000300: -1.672e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.588e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.92e0

GenotypeDepth
all individuals: 261
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 590
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12443
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2705
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3108
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1054
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2411
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3497
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21382
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7321
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1637
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2736
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3114
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1031
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7204
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.589963280293758e-5
allele num: 65360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.68e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.312e0

QD
type: SiteQuality
SIO_000300: 1.479e1

MQ
type: SiteQuality
SIO_000300: 5.669e1

DP
type: SiteQuality
SIO_000300: 1.781644e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.32e-1

GenotypeDepth
all individuals: 1913
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 437
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3326
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7076
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3133
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3490
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2703
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1698
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3118
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19792
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7319
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1031
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2409
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531346666258308e-5
allele num: 65302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.772748e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.94e0

VQSLOD
type: SiteQuality
SIO_000300: -2.891e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.56e0

GenotypeDepth
all individuals: 457
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 386
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 813
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2624
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3225
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7317
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1423
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1022
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5142
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3852
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2353
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5110
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4986
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2358
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1847
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2263
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2609
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4477
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8794
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.197322756569162e-5
allele num: 16136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9944
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

DP
type: SiteQuality
SIO_000300: 1.744679e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.73e-1

QD
type: SiteQuality
SIO_000300: 1.359e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.73e0

GenotypeDepth
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4765
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 457
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2631
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5084
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4480
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1825
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2350
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2587
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7318
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2332
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3216
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8964
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5009
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5116
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3831
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9928
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.211180124223603e-5
allele num: 16100
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8232
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.119e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.363e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

DP
type: SiteQuality
SIO_000300: 1.744943e6

QD
type: SiteQuality
SIO_000300: 1.252e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

MQRankSum
type: SiteQuality
SIO_000300: -2.135e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeDepth
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1824
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20797
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5096
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4513
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3065
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2007
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2570
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3127
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10279
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 679
bin: 9.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9410
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.14215329248961e-5
allele num: 46682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5586
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.044e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 1.916e0

DP
type: SiteQuality
SIO_000300: 1.000876e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.06e-1

QD
type: SiteQuality
SIO_000300: 3.063e1

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4259
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1771
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1661
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3014
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21846
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2631
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4997
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10369
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3046
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9476
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.267441860465116e-5
allele num: 13760
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46874
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.83e-1

QD
type: SiteQuality
SIO_000300: 1.333e1

DP
type: SiteQuality
SIO_000300: 1.0068e6

FS
type: SiteQuality
SIO_000300: 7.574e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.893e1

VQSLOD
type: SiteQuality
SIO_000300: -7.433e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.044e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4517
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3457
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2865
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24375
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1241
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10381
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2859
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1206
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2756
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 541
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5636
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.231e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQ
type: SiteQuality
SIO_000300: 5.203e1

VQSLOD
type: SiteQuality
SIO_000300: -1.762e0

DP
type: SiteQuality
SIO_000300: 1.028524e6

QD
type: SiteQuality
SIO_000300: 6.38e0

GenotypeDepth
all individuals: 9271
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34402
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9423
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 278
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1821
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2211
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3200
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7766
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.026753141467369e-4
allele num: 9868
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14276
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.171e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.107e1

VQSLOD
type: SiteQuality
SIO_000300: 3.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

DP
type: SiteQuality
SIO_000300: 1.135481e6

GenotypeDepth
all individuals: 29058
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 49
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34832
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2135
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1380
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9280
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3241
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1653
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.018163471241171e-5
allele num: 49550
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.901e0

VQSLOD
type: SiteQuality
SIO_000300: -1.448e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.34e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

QD
type: SiteQuality
SIO_000300: 1.182e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.98e-1

DP
type: SiteQuality
SIO_000300: 1.142608e6

GenotypeDepth
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 49
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10136
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3329
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8572
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37175
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1003
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10034
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.523461304082876e-4
allele num: 6564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50562
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.748e0

MQRankSum
type: SiteQuality
SIO_000300: 5.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.63e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.009e0

FS
type: SiteQuality
SIO_000300: 1.8276e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

DP
type: SiteQuality
SIO_000300: 1.173272e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.41e-1

QD
type: SiteQuality
SIO_000300: 1.095e1

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 419
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 219
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3358
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8376
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1881
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38203
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50964
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5826
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.84369011771147e-5
allele num: 14612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.49e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.317e0

VQSLOD
type: SiteQuality
SIO_000300: -8.609e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

DP
type: SiteQuality
SIO_000300: 1.182126e6

QD
type: SiteQuality
SIO_000300: 7.99e0

GenotypeDepth
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 416
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38392
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 8334
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1859
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3368
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51026
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5822
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 5.055611729019212e-4
allele num: 7912
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.41e0

DP
type: SiteQuality
SIO_000300: 1.183788e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.78e-1

QD
type: SiteQuality
SIO_000300: 1.155e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-1

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3376
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8160
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38611
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1801
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.951524140353616e-5
allele num: 51242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7924
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.236e0

VQSLOD
type: SiteQuality
SIO_000300: 3.58e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

DP
type: SiteQuality
SIO_000300: 1.189906e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.65e-1

QD
type: SiteQuality
SIO_000300: 1.016e1

GenotypeDepth
all individuals: 7266
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 49
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2531
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1807
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38942
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 605
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8122
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3390
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.948330280949227e-5
allele num: 51326
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5866
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.039999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -2.697e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

DP
type: SiteQuality
SIO_000300: 1.19168e6

FS
type: SiteQuality
SIO_000300: 6.262e0

MQ
type: SiteQuality
SIO_000300: 5.864e1

MQRankSum
type: SiteQuality
SIO_000300: -2.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e-1

GenotypeDepth
all individuals: 539
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39433
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3370
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8047
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1767
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 516
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7934
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.852216748768474e-5
allele num: 10150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.317e0

DP
type: SiteQuality
SIO_000300: 1.196759e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.99e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

VQSLOD
type: SiteQuality
SIO_000300: -9.954e-1

FS
type: SiteQuality
SIO_000300: 6.092e0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.059e0

QD
type: SiteQuality
SIO_000300: 8.140000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

GenotypeDepth
all individuals: 10638
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1767
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39433
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8047
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3370
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 208
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7934
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.882138281765597e-5
allele num: 51518
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

QD
type: SiteQuality
SIO_000300: 8.140000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.059e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.317e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

VQSLOD
type: SiteQuality
SIO_000300: -9.954e-1

FS
type: SiteQuality
SIO_000300: 6.092e0

DP
type: SiteQuality
SIO_000300: 1.196759e6

GenotypeDepth
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1779
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3381
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39425
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8086
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 281
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5858
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.361841209314994e-4
allele num: 14686
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.855e1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

QD
type: SiteQuality
SIO_000300: 1.222e1

DP
type: SiteQuality
SIO_000300: 1.198287e6

FS
type: SiteQuality
SIO_000300: 3.069e0

VQSLOD
type: SiteQuality
SIO_000300: -5.864e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.96e-1

GenotypeDepth
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10912
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 49
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31215
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37897
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1700
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8487
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3356
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 137
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10132
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.836204539239814e-5
allele num: 14628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

QD
type: SiteQuality
SIO_000300: 1.788e1

FS
type: SiteQuality
SIO_000300: 1.365e0

DP
type: SiteQuality
SIO_000300: 1.19101e6

VQSLOD
type: SiteQuality
SIO_000300: 3.26e0

MQRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.76e-1

MQ
type: SiteQuality
SIO_000300: 5.646e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-1

GenotypeDepth
all individuals: 49
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10903
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8522
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38207
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1711
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 279
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3351
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 672
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5836
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51226
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.856275303643725e-4
allele num: 7904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14630
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 1.191751e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

FS
type: SiteQuality
SIO_000300: 3.548e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

QD
type: SiteQuality
SIO_000300: 1.294e1

MQRankSum
type: SiteQuality
SIO_000300: 5.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.4e0

GenotypeDepth
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 49
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3315
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8720
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 664
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38320
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.027550711474417e-4
allele num: 6606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7892
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51092
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

QD
type: SiteQuality
SIO_000300: 1.133e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 1.190609e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.679e0

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.56e-1

FS
type: SiteQuality
SIO_000300: 4.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 123
bin: 5.75e1
variant carriers: 15

GenotypeDepth
all individuals: 54
bin: 6.25e1
variant carriers: 8

GenotypeDepth
all individuals: 178
bin: 4.75e1
variant carriers: 18

GenotypeDepth
all individuals: 7435
bin: 7.5e0
variant carriers: 11

GenotypeDepth
all individuals: 10
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1739
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 513
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 553
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 9.75e1
variant carriers: 285

GenotypeQuality
all individuals: 113
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 463
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 222
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 114
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 658
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 145
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9051
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 273
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 261
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 589
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 37828
bin: 6.25e1
variant carriers: 3

Latino
type: Population
allele count: 17
allele frequency: 1.685170499603489e-3
allele num: 10088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 216
allele frequency: 4.246451460700664e-3
allele num: 50866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.380262249827467e-3
allele num: 5796
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.949852507374631e-3
allele num: 678
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 7.589556769884638e-4
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 41
allele frequency: 2.811685639829927e-3
allele num: 14582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7870
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.67e0

QD
type: SiteQuality
SIO_000300: 1.127e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.523e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

DP
type: SiteQuality
SIO_000300: 1.189003e6

GenotypeDepth
all individuals: 1930
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3313
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9366
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37761
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10070
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.974099810486418e-5
allele num: 50656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14530
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.181076e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

MQRankSum
type: SiteQuality
SIO_000300: -5.71e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e-1

FS
type: SiteQuality
SIO_000300: 3.5e0

QD
type: SiteQuality
SIO_000300: 1.262e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 142
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3284
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37431
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9804
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1764
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 9.75e1
variant carriers: 8

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7820
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.590836780146357e-4
allele num: 50288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5750
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10016
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.17563e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

FS
type: SiteQuality
SIO_000300: 5.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.077e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

QD
type: SiteQuality
SIO_000300: 1.151e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.21e-1

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2113
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3132
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12556
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33408
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.085070892410342e-5
allele num: 47960
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.05e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

DP
type: SiteQuality
SIO_000300: 1.125636e6

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

GenotypeDepth
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33673
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12622
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2099
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3123
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14172
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9656
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5558
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.312680493567866e-4
allele num: 7618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47986
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.55e0

VQSLOD
type: SiteQuality
SIO_000300: -9.818e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.67e0

DP
type: SiteQuality
SIO_000300: 1.125094e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.54e-1

FS
type: SiteQuality
SIO_000300: 3.779e0

MQ
type: SiteQuality
SIO_000300: 5.34e1

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 142
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 213
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3119
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13050
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.101370093300832e-5
allele num: 47588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.11671e6

MQ
type: SiteQuality
SIO_000300: 5.896e1

QD
type: SiteQuality
SIO_000300: 1.454e1

MQRankSum
type: SiteQuality
SIO_000300: -6.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e0

FS
type: SiteQuality
SIO_000300: 5.942e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.163e-1

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 142
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10538
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2239
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13498
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3111
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32468
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 362
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.103049421661409e-4
allele num: 9510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.64e-1

FS
type: SiteQuality
SIO_000300: 1.372e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

QD
type: SiteQuality
SIO_000300: 8.99e0

DP
type: SiteQuality
SIO_000300: 1.107874e6

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 411
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 488
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23298
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1894
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19280
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1409
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3368
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2721
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 9.75e1
variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.072802715956243e-5
allele num: 42416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7012
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.929273084479371e-4
allele num: 5090
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.898e0

VQSLOD
type: SiteQuality
SIO_000300: 9.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

QD
type: SiteQuality
SIO_000300: 1.372e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.532e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.3e-3

DP
type: SiteQuality
SIO_000300: 9.88431e5

GenotypeDepth
all individuals: 28
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24081
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3011
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3389
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 245
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1922
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 224
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 6917
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 11656
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 2.592016588906169e-4
allele num: 34722
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.820167455405897e-4
allele num: 5494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6126
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.43427458617332e-4
allele num: 12324
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.53e-2

FS
type: SiteQuality
SIO_000300: 9.65e-1

DP
type: SiteQuality
SIO_000300: 7.91788e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

VQSLOD
type: SiteQuality
SIO_000300: 3.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

QD
type: SiteQuality
SIO_000300: 1.344e1

GenotypeDepth
all individuals: 11
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1424
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1674
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3503
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1496
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23293
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8884
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3707
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8230
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.203074951953876e-5
allele num: 31220
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6082
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11870
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.32e-1

DP
type: SiteQuality
SIO_000300: 7.17649e5

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.87e-2

QD
type: SiteQuality
SIO_000300: 8.57e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.225e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.108000000000001e-1

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17726
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9762
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22464
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3719
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6882
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2013
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1482
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4167
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29734
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.552856654122477e-5
allele num: 11692
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4096
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 494
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.945e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.02e-2

QD
type: SiteQuality
SIO_000300: 6.4e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

FS
type: SiteQuality
SIO_000300: 4.191e0

DP
type: SiteQuality
SIO_000300: 6.86334e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.78e-1

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2625
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2710
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1888
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 224
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 545
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3904
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4732
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10989
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 180
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 673
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 20169
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 127
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 9.75e1
variant carriers: 36

GenotypeQuality
all individuals: 155
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 176
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4627
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3854
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 1.188118811881188e-3
allele num: 5050
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5210
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 2.582439411998411e-3
allele num: 5034
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 5.183649289099526e-4
allele num: 27008
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.777461784571632e-4
allele num: 11252
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

VQSLOD
type: SiteQuality
SIO_000300: 3.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-1

FS
type: SiteQuality
SIO_000300: 1.415e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.37e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

QD
type: SiteQuality
SIO_000300: 1.287e1

DP
type: SiteQuality
SIO_000300: 6.4003e5

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19857
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4393
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2693
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3927
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1941
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11188
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2865
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4780
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 159
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3834
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.006420545746388e-4
allele num: 4984
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4924
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26676
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.15e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.755e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.425e1

DP
type: SiteQuality
SIO_000300: 6.33483e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

GenotypeDepth
all individuals: 11
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1574
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6326
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3773
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3249
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12314
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 167
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1189
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5171
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11276
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4995
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.418912947414936e-5
allele num: 22630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.554e0

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

QD
type: SiteQuality
SIO_000300: 1.656e1

MQ
type: SiteQuality
SIO_000300: 5.89e1

VQSLOD
type: SiteQuality
SIO_000300: -1.72e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.89986e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.87e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.252e0

GenotypeDepth
all individuals: 536
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6466
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4882
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11804
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2138
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1980
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3349
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2199
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3057
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1574
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4181
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14556
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10106
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.710801393728223e-5
allele num: 11480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15894
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.7e0

MQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.648e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.17e-1

QD
type: SiteQuality
SIO_000300: 1.517e1

DP
type: SiteQuality
SIO_000300: 1.925526e6

GenotypeDepth
all individuals: 871
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1003
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3080
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6688
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3377
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15927
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4906
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4247
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2221
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14576
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 785
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.278252134605726e-5
allele num: 15928
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.046314771146986e-5
allele num: 66156
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.148e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.11e-1

DP
type: SiteQuality
SIO_000300: 1.951366e6

VQSLOD
type: SiteQuality
SIO_000300: 4.55e0

QD
type: SiteQuality
SIO_000300: 1.457e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.99e-1

GenotypeDepth
all individuals: 436
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17567
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14584
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6884
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3105
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4993
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2239
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66232
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e0

FS
type: SiteQuality
SIO_000300: 2.124e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.78e0

DP
type: SiteQuality
SIO_000300: 1.967349e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.94e1

VQSLOD
type: SiteQuality
SIO_000300: -1.153e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.289e0

QD
type: SiteQuality
SIO_000300: 1.591e1

GenotypeDepth
all individuals: 6721
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 222
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3115
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5079
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2256
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18918
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14593
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 7096
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3489
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4346
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 1.567398119122257e-3
allele num: 10208
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-1

DP
type: SiteQuality
SIO_000300: 1.986583e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.09e0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

QD
type: SiteQuality
SIO_000300: 1.79e1

GenotypeDepth
all individuals: 152
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4357
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19307
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14588
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 151
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2262
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5100
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7124
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3513
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3120
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505434618974498e-5
allele num: 66426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-1

QD
type: SiteQuality
SIO_000300: 2.165e1

FS
type: SiteQuality
SIO_000300: 1.012e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.591e0

MQRankSum
type: SiteQuality
SIO_000300: 8.77e-1

DP
type: SiteQuality
SIO_000300: 1.991984e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

MQ
type: SiteQuality
SIO_000300: 5.898e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e0

GenotypeDepth
all individuals: 318
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3529
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19439
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4367
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2262
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7158
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3120
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5110
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14589
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504845602841149e-5
allele num: 66452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.359e0

QD
type: SiteQuality
SIO_000300: 2.098e1

MQ
type: SiteQuality
SIO_000300: 5.863e1

MQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: -3.153e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

DP
type: SiteQuality
SIO_000300: 1.995162e6

GenotypeDepth
all individuals: 320
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2262
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3120
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4362
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3533
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5112
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19523
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14610
bin: 9.75e1
variant carriers: 32

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16292
num of homozygotes: 0

African
type: Population
allele count: 30
allele frequency: 2.917152858809802e-3
allele num: 10284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66460
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.737015806843842e-4
allele num: 11514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

FS
type: SiteQuality
SIO_000300: 2.123e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

MQ
type: SiteQuality
SIO_000300: 5.999e1

VQSLOD
type: SiteQuality
SIO_000300: 3.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e-1

DP
type: SiteQuality
SIO_000300: 1.99666e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.31e-1

QD
type: SiteQuality
SIO_000300: 1.836e1

GenotypeDepth
all individuals: 440
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4362
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14610
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2262
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19523
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3120
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5112
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3533
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504664459825459e-5
allele num: 66460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16292
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.11e0

FS
type: SiteQuality
SIO_000300: 2.123e0

QD
type: SiteQuality
SIO_000300: 1.836e1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

DP
type: SiteQuality
SIO_000300: 1.99666e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.31e-1

MQ
type: SiteQuality
SIO_000300: 5.999e1

GenotypeDepth
all individuals: 872
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3560
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14597
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 81
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5117
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2267
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7197
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19755
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4369
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3122
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 3.876720294630742e-4
allele num: 10318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.119202056051891e-5
allele num: 16342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503895088278642e-5
allele num: 66494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.999355e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e-1

MQ
type: SiteQuality
SIO_000300: 5.745e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.25e0

FS
type: SiteQuality
SIO_000300: 6.25e-1

QD
type: SiteQuality
SIO_000300: 1.782e1

GenotypeDepth
all individuals: 1342
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19840
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3568
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3123
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4367
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7207
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5122
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2268
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14593
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503307276007216e-5
allele num: 66520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.000284e6

MQRankSum
type: SiteQuality
SIO_000300: -1.755e0

VQSLOD
type: SiteQuality
SIO_000300: -2.521e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.41e0

QD
type: SiteQuality
SIO_000300: 2.061e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.804e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.082e0

GenotypeDepth
all individuals: 198
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4374
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20185
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2269
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5138
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14602
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3577
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7245
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3124
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.006417e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 8.24e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.93e0

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

QD
type: SiteQuality
SIO_000300: 1.218e1

GenotypeDepth
all individuals: 424
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14601
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2269
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20301
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4380
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7264
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3126
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3583
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5142
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.5e-1

DP
type: SiteQuality
SIO_000300: 2.008093e6

MQRankSum
type: SiteQuality
SIO_000300: -1.482e0

FS
type: SiteQuality
SIO_000300: 2.647e0

VQSLOD
type: SiteQuality
SIO_000300: -5.576e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.035e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.506e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

MQ
type: SiteQuality
SIO_000300: 5.929e1

GenotypeDepth
all individuals: 2163
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3584
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14603
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2269
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7265
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5142
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3126
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20306
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4380
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.029e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 2.008283e6

VQSLOD
type: SiteQuality
SIO_000300: 1.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 2.91e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

GenotypeDepth
all individuals: 319
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4381
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2270
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20307
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3584
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3126
bin: 9.25e1
variant carriers: 0