4-2828917-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828917
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828917
    reference: chr 4
allele count: 1
allele frequency: 8.622771013692961e-6
allele num: 115972
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-40C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-40C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.495C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-40C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-40C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-40C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-40C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-40C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-40C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-40C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.866C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-40C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.341C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-40C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-40C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-40C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-40C>G
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38081
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-2828927-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828927
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828927
    reference: chr 4
allele count: 2
allele frequency: 1.683076664142052e-5
allele num: 118830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-30C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.505C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-30C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-30C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-30C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-30C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.876C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-30C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-30C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-30C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-30C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-30C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.351C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-30C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-30C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-30C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-30C>A
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

4-2828927-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828927
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828927
    reference: chr 4
allele count: 2
allele frequency: 1.683076664142052e-5
allele num: 118830
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-30C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.505C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.351C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-30C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-30C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-30C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-30C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.876C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-30C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-30C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-30C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-30C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-30C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-30C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-30C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-30C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-30C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38548
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

4-2828928-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828928
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828928
    reference: chr 4
allele count: 4
allele frequency: 3.359424866462861e-5
allele num: 119068
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-29C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-29C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-29C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-29C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-29C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.877C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.352C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-29C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-29C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.506C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-29C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-29C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-29C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-29C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-29C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-29C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-29C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9743
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

4-2828929-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828929
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828929
    reference: chr 4
allele count: 7
allele frequency: 5.85587846542522e-5
allele num: 119538
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-28G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-28G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-28G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-28G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-28G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.878G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.507G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-28G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-28G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-28G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-28G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-28G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.353G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-28G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-28G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-28G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-28G>A
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9921
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38503
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

4-2828932-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828932
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828932
    reference: chr 4
allele count: 7
allele frequency: 5.831681023709949e-5
allele num: 120034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-25C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-25C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-25C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.881C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-25C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-25C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-25C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-25C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-25C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.510C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-25C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-25C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-25C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.356C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-25C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-25C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-25C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

4-2828933-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828933
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828933
    reference: chr 4
allele count: 5
allele frequency: 4.158073315148693e-5
allele num: 120248
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.882G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-24G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-24G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-24G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-24G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.357G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-24G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-24G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.511G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-24G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-24G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-24G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-24G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-24G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-24G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-24G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-24G>A
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

4-2828935-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828935
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828935
    reference: chr 4
allele count: 1
allele frequency: 8.302613662781043e-6
allele num: 120444
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-22C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-22C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-22C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.359C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.884C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-22C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-22C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-22C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-22C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-22C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.513C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-22C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-22C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-22C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-22C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-22C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-22C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

4-2828939-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828939
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828939
    reference: chr 4
allele count: 1
allele frequency: 8.282533792737874e-6
allele num: 120736
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-18A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-18A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-18A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.363A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.888A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.517A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-18A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-18A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-18A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-18A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-18A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-18A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-18A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-18A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-18A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-18A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-18A>G
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

4-2828940-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828940
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828940
    reference: chr 4
allele count: 13
allele frequency: 1.076194575979337e-4
allele num: 120796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-17C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-17C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-17C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.889C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-17C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-17C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.364C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-17C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-17C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-17C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-17C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-17C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.518C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-17C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-17C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-17C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-17C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

4-2828941-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828941
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828941
    reference: chr 4
allele count: 2
allele frequency: 1.654861984510492e-5
allele num: 120856
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.890G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.365G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.519G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-16G>A
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38389
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

4-2828942-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828942
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828942
    reference: chr 4
allele count: 3
allele frequency: 2.480486836883186e-5
allele num: 120944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.520C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.891C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.366C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-15C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum

4-2828944-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828944
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828944
    reference: chr 4
allele count: 1
allele frequency: 8.264326209484141e-6
allele num: 121002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-13C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.368C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-13C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-13C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.522C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-13C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.893C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-13C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-13C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-13C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-13C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-13C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-13C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-13C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-13C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-13C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-13C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

4-2828946-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828946
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828946
    reference: chr 4
allele count: 1
allele frequency: 8.260639703938672e-6
allele num: 121056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-11C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-11C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.895C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-11C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.524C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-11C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-11C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-11C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-11C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-11C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-11C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-11C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-11C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.370C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-11C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-11C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-11C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10687
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

4-2828947-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828947
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828947
    reference: chr 4
allele count: 1
allele frequency: 8.258593066085262e-6
allele num: 121086
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-10T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.525T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-10T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-10T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-10T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-10T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-10T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-10T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.896T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-10T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-10T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-10T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-10T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.371T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-10T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-10T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-10T>C
  variant of: http://identifiers.org/hgnc/10825
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

4-2828953-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828953
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828953
    reference: chr 4
allele count: 1
allele frequency: 8.252459232851389e-6
allele num: 121176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429-4G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.377G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429-4G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314-4G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429-4G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447-4G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513-4G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600-4G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167-4G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429-4G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429-4G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429-4G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005-4G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.531G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.902G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879-4G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429-4G>A
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.600-4G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD

4-2828957-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828957
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828957
    reference: chr 4
allele count: 1
allele frequency: 8.25082508250825e-6
allele num: 121200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.429C>T
  hgvsp: ENST00000504294.1:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.429C>T
  hgvsp: ENST00000452765.2:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1005C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.906C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.447C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*314C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.513C>T
  hgvsp: ENST00000442312.2:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.167C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.429C>T
  hgvsp: ENST00000511747.1:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.429C>T
  hgvsp: ENST00000356331.5:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.429C>T
  hgvsp: ENST00000435136.2:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.879C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.429C>T
  hgvsp: ENST00000508385.1:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.535C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.600C>T
  hgvsp: ENST00000503393.2:c.600C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.381C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.429C>T
  hgvsp: ENST00000512014.1:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.600C>T
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP

4-2828959-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828959
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828959
    reference: chr 4
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.431A>T
  hgvsp: ENSP00000424105.1:p.Asp144Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.431A>T
  hgvsp: ENSP00000409746.2:p.Asp144Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.169A>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*316A>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.515A>T
  hgvsp: ENSP00000388152.2:p.Asp172Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.881A>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.431A>T
  hgvsp: ENSP00000424846.1:p.Asp144Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.431A>T
  hgvsp: ENSP00000403231.2:p.Asp144Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1007A>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.537A>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.602A>T
  hgvsp: ENSP00000422168.2:p.Asp201Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.431A>T
  hgvsp: ENSP00000424917.1:p.Asp144Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.431A>T
  hgvsp: ENSP00000348685.5:p.Asp144Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.449A>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.908A>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.383A>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.431A>T
  hgvsp: ENSP00000423275.1:p.Asp144Val
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp201Val
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

4-2828967-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828967
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828967
    reference: chr 4
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.439T>C
  hgvsp: ENSP00000423275.1:p.Ser147Pro
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.457T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.545T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.439T>C
  hgvsp: ENSP00000424917.1:p.Ser147Pro
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.439T>C
  hgvsp: ENSP00000424846.1:p.Ser147Pro
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.439T>C
  hgvsp: ENSP00000403231.2:p.Ser147Pro
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.523T>C
  hgvsp: ENSP00000388152.2:p.Ser175Pro
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.439T>C
  hgvsp: ENSP00000409746.2:p.Ser147Pro
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.439T>C
  hgvsp: ENSP00000348685.5:p.Ser147Pro
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.391T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.439T>C
  hgvsp: ENSP00000424105.1:p.Ser147Pro
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*324T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.177T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.889T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.610T>C
  hgvsp: ENSP00000422168.2:p.Ser204Pro
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.916T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1015T>C
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38396
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser204Pro
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

4-2828968-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828968
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828968
    reference: chr 4
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.440C>G
  hgvsp: ENSP00000403231.2:p.Ser147Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1016C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.392C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.546C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.524C>G
  hgvsp: ENSP00000388152.2:p.Ser175Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.178C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.458C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.440C>G
  hgvsp: ENSP00000348685.5:p.Ser147Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.440C>G
  hgvsp: ENSP00000409746.2:p.Ser147Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.890C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.440C>G
  hgvsp: ENSP00000424105.1:p.Ser147Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.440C>G
  hgvsp: ENSP00000424917.1:p.Ser147Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*325C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.611C>G
  hgvsp: ENSP00000422168.2:p.Ser204Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.917C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.440C>G
  hgvsp: ENSP00000423275.1:p.Ser147Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.440C>G
  hgvsp: ENSP00000424846.1:p.Ser147Trp
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser204Trp
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

4-2828968-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828968
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828968
    reference: chr 4
allele count: 5
allele frequency: 4.122011541632317e-5
allele num: 121300
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.178C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.440C>T
  hgvsp: ENSP00000403231.2:p.Ser147Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.440C>T
  hgvsp: ENSP00000424105.1:p.Ser147Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.392C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.440C>T
  hgvsp: ENSP00000348685.5:p.Ser147Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.546C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.440C>T
  hgvsp: ENSP00000424917.1:p.Ser147Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.524C>T
  hgvsp: ENSP00000388152.2:p.Ser175Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.440C>T
  hgvsp: ENSP00000409746.2:p.Ser147Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.917C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.440C>T
  hgvsp: ENSP00000424846.1:p.Ser147Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.611C>T
  hgvsp: ENSP00000422168.2:p.Ser204Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.458C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*325C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.890C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1016C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.440C>T
  hgvsp: ENSP00000423275.1:p.Ser147Leu
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser204Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

4-2828969-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828969
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828969
    reference: chr 4
allele count: 56
allele frequency: 4.616348468361526e-4
allele num: 121308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.891G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.441G>A
  hgvsp: ENST00000452765.2:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.612G>A
  hgvsp: ENST00000503393.2:c.612G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.441G>A
  hgvsp: ENST00000356331.5:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.441G>A
  hgvsp: ENST00000435136.2:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.525G>A
  hgvsp: ENST00000442312.2:c.525G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.441G>A
  hgvsp: ENST00000508385.1:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.547G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*326G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.918G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.459G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.441G>A
  hgvsp: ENST00000511747.1:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.179G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.441G>A
  hgvsp: ENST00000504294.1:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.393G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.441G>A
  hgvsp: ENST00000512014.1:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1017G>A
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser204Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-2828977-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828977
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828977
    reference: chr 4
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.449A>C
  hgvsp: ENSP00000409746.2:p.Asp150Ala
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.449A>C
  hgvsp: ENSP00000424105.1:p.Asp150Ala
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.401A>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1025A>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.187A>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.467A>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.449A>C
  hgvsp: ENSP00000424846.1:p.Asp150Ala
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.449A>C
  hgvsp: ENSP00000423275.1:p.Asp150Ala
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.449A>C
  hgvsp: ENSP00000424917.1:p.Asp150Ala
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.620A>C
  hgvsp: ENSP00000422168.2:p.Asp207Ala
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.533A>C
  hgvsp: ENSP00000388152.2:p.Asp178Ala
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.449A>C
  hgvsp: ENSP00000403231.2:p.Asp150Ala
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*334A>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.449A>C
  hgvsp: ENSP00000348685.5:p.Asp150Ala
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.926A>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.899A>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.555A>C
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp207Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

4-2828981-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828981
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828981
    reference: chr 4
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.191C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.559C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.453C>T
  hgvsp: ENST00000452765.2:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.453C>T
  hgvsp: ENST00000512014.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.453C>T
  hgvsp: ENST00000356331.5:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.453C>T
  hgvsp: ENST00000508385.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.537C>T
  hgvsp: ENST00000442312.2:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.624C>T
  hgvsp: ENST00000503393.2:c.624C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.903C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.453C>T
  hgvsp: ENST00000511747.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.453C>T
  hgvsp: ENST00000504294.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.405C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1029C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.471C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.930C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*338C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.453C>T
  hgvsp: ENST00000435136.2:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser208Ser
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

4-2828987-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828987
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828987
    reference: chr 4
allele count: 21
allele frequency: 1.730303379859269e-4
allele num: 121366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1035C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.459C>T
  hgvsp: ENST00000512014.1:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.459C>T
  hgvsp: ENST00000508385.1:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.565C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.936C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.543C>T
  hgvsp: ENST00000442312.2:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.459C>T
  hgvsp: ENST00000504294.1:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.459C>T
  hgvsp: ENST00000356331.5:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.459C>T
  hgvsp: ENST00000452765.2:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.459C>T
  hgvsp: ENST00000435136.2:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.630C>T
  hgvsp: ENST00000503393.2:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.909C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.477C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*344C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.197C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.459C>T
  hgvsp: ENST00000511747.1:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.411C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr210Tyr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

4-2828991-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828991
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828991
    reference: chr 4
allele count: 2
allele frequency: 1.647907980818351e-5
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.415G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.634G>A
  hgvsp: ENSP00000422168.2:p.Ala212Thr
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*348G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.463G>A
  hgvsp: ENSP00000403231.2:p.Ala155Thr
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.547G>A
  hgvsp: ENSP00000388152.2:p.Ala183Thr
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.481G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.463G>A
  hgvsp: ENSP00000424105.1:p.Ala155Thr
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.463G>A
  hgvsp: ENSP00000423275.1:p.Ala155Thr
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.463G>A
  hgvsp: ENSP00000348685.5:p.Ala155Thr
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.463G>A
  hgvsp: ENSP00000424846.1:p.Ala155Thr
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.463G>A
  hgvsp: ENSP00000424917.1:p.Ala155Thr
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.913G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.463G>A
  hgvsp: ENSP00000409746.2:p.Ala155Thr
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.201G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1039G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.569G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.940G>A
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10925
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala212Thr
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-2828992-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828992
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828992
    reference: chr 4
allele count: 682
allele frequency: 5.619273614132226e-3
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*349C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.464C>T
  hgvsp: ENSP00000424105.1:p.Ala155Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.464C>T
  hgvsp: ENSP00000424846.1:p.Ala155Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.464C>T
  hgvsp: ENSP00000409746.2:p.Ala155Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.464C>T
  hgvsp: ENSP00000424917.1:p.Ala155Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.548C>T
  hgvsp: ENSP00000388152.2:p.Ala183Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.202C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.416C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.464C>T
  hgvsp: ENSP00000348685.5:p.Ala155Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.635C>T
  hgvsp: ENSP00000422168.2:p.Ala212Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.941C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1040C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.464C>T
  hgvsp: ENSP00000423275.1:p.Ala155Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.482C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.570C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.464C>T
  hgvsp: ENSP00000403231.2:p.Ala155Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.914C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 37864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 4.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.25e1
  variant carriers: 45
genotype quality: GenotypeQuality
hgvs: p.Ala212Val
num of homozygotes: 4
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

4-2828997-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2828997
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2828997
    reference: chr 4
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.487G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.469G>C
  hgvsp: ENSP00000423275.1:p.Glu157Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.640G>C
  hgvsp: ENSP00000422168.2:p.Glu214Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.469G>C
  hgvsp: ENSP00000424105.1:p.Glu157Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.469G>C
  hgvsp: ENSP00000424917.1:p.Glu157Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.469G>C
  hgvsp: ENSP00000403231.2:p.Glu157Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.469G>C
  hgvsp: ENSP00000424846.1:p.Glu157Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.469G>C
  hgvsp: ENSP00000348685.5:p.Glu157Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.207G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.575G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.469G>C
  hgvsp: ENSP00000409746.2:p.Glu157Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1045G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.919G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.421G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.553G>C
  hgvsp: ENSP00000388152.2:p.Glu185Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.946G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*354G>C
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu214Gln
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

4-2829000-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829000
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829000
    reference: chr 4
allele count: 20
allele frequency: 1.64774506088418e-4
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.424C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.472C>T
  hgvsp: ENSP00000423275.1:p.Arg158Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.472C>T
  hgvsp: ENSP00000424846.1:p.Arg158Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.472C>T
  hgvsp: ENSP00000424917.1:p.Arg158Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.578C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.472C>T
  hgvsp: ENSP00000424105.1:p.Arg158Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.922C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.643C>T
  hgvsp: ENSP00000422168.2:p.Arg215Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.472C>T
  hgvsp: ENSP00000348685.5:p.Arg158Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.556C>T
  hgvsp: ENSP00000388152.2:p.Arg186Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1048C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.210C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.472C>T
  hgvsp: ENSP00000409746.2:p.Arg158Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.490C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.949C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.472C>T
  hgvsp: ENSP00000403231.2:p.Arg158Trp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*357C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37855
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg215Trp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

4-2829001-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829001
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829001
    reference: chr 4
allele count: 2
allele frequency: 1.64774506088418e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.644G>A
  hgvsp: ENSP00000422168.2:p.Arg215Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.425G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.579G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.950G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.491G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.473G>A
  hgvsp: ENSP00000348685.5:p.Arg158Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.473G>A
  hgvsp: ENSP00000403231.2:p.Arg158Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*358G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1049G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.473G>A
  hgvsp: ENSP00000424846.1:p.Arg158Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.473G>A
  hgvsp: ENSP00000424105.1:p.Arg158Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.923G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.557G>A
  hgvsp: ENSP00000388152.2:p.Arg186Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.473G>A
  hgvsp: ENSP00000409746.2:p.Arg158Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.211G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.473G>A
  hgvsp: ENSP00000424917.1:p.Arg158Gln
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.473G>A
  hgvsp: ENSP00000423275.1:p.Arg158Gln
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10903
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg215Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

4-2829006-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829006
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829006
    reference: chr 4
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.478G>C
  hgvsp: ENSP00000403231.2:p.Val160Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.478G>C
  hgvsp: ENSP00000348685.5:p.Val160Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1054G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.216G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.496G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.478G>C
  hgvsp: ENSP00000424917.1:p.Val160Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.478G>C
  hgvsp: ENSP00000424105.1:p.Val160Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.478G>C
  hgvsp: ENSP00000409746.2:p.Val160Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.478G>C
  hgvsp: ENSP00000423275.1:p.Val160Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.478G>C
  hgvsp: ENSP00000424846.1:p.Val160Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.584G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.649G>C
  hgvsp: ENSP00000422168.2:p.Val217Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.955G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.928G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*363G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.562G>C
  hgvsp: ENSP00000388152.2:p.Val188Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.430G>C
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37858
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val217Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

4-2829018-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829018
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829018
    reference: chr 4
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.490C>G
  hgvsp: ENSP00000424846.1:p.Leu164Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.490C>G
  hgvsp: ENSP00000409746.2:p.Leu164Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.490C>G
  hgvsp: ENSP00000348685.5:p.Leu164Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.574C>G
  hgvsp: ENSP00000388152.2:p.Leu192Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.508C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.442C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.940C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.490C>G
  hgvsp: ENSP00000424917.1:p.Leu164Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.596C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.228C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*375C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.490C>G
  hgvsp: ENSP00000424105.1:p.Leu164Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.490C>G
  hgvsp: ENSP00000403231.2:p.Leu164Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.661C>G
  hgvsp: ENSP00000422168.2:p.Leu221Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.490C>G
  hgvsp: ENSP00000423275.1:p.Leu164Val
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.967C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1066C>G
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu221Val
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

4-2829018-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829018
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829018
    reference: chr 4
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.490C>T
  hgvsp: ENSP00000423275.1:p.Leu164Phe
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.490C>T
  hgvsp: ENSP00000409746.2:p.Leu164Phe
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.596C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1066C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.490C>T
  hgvsp: ENSP00000424917.1:p.Leu164Phe
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.490C>T
  hgvsp: ENSP00000403231.2:p.Leu164Phe
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.508C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.228C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.490C>T
  hgvsp: ENSP00000348685.5:p.Leu164Phe
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.490C>T
  hgvsp: ENSP00000424105.1:p.Leu164Phe
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.661C>T
  hgvsp: ENSP00000422168.2:p.Leu221Phe
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*375C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.490C>T
  hgvsp: ENSP00000424846.1:p.Leu164Phe
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.442C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.940C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.574C>T
  hgvsp: ENSP00000388152.2:p.Leu192Phe
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.967C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37844
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu221Phe
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

4-2829019-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829019
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829019
    reference: chr 4
allele count: 15
allele frequency: 1.235503426462836e-4
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.662T>G
  hgvsp: ENSP00000422168.2:p.Leu221Arg
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.968T>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.491T>G
  hgvsp: ENSP00000348685.5:p.Leu164Arg
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.491T>G
  hgvsp: ENSP00000409746.2:p.Leu164Arg
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.941T>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.575T>G
  hgvsp: ENSP00000388152.2:p.Leu192Arg
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.597T>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.491T>G
  hgvsp: ENSP00000424105.1:p.Leu164Arg
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.491T>G
  hgvsp: ENSP00000424846.1:p.Leu164Arg
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.443T>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511185
  gene symbol: SH3BP2
  hgvsc: ENST00000511185.1:n.1067T>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.491T>G
  hgvsp: ENSP00000423275.1:p.Leu164Arg
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*376T>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.491T>G
  hgvsp: ENSP00000424917.1:p.Leu164Arg
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.491T>G
  hgvsp: ENSP00000403231.2:p.Leu164Arg
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.229T>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.509T>G
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu221Arg
num of homozygotes: 1
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

4-2829025-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829025
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829025
    reference: chr 4
allele count: 3
allele frequency: 2.471210398853358e-5
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.497C>T
  hgvsp: ENSP00000423275.1:p.Pro166Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.497C>T
  hgvsp: ENSP00000348685.5:p.Pro166Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.974C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.497C>T
  hgvsp: ENSP00000403231.2:p.Pro166Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.515C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.497C>T
  hgvsp: ENSP00000424105.1:p.Pro166Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.581C>T
  hgvsp: ENSP00000388152.2:p.Pro194Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.497C>T
  hgvsp: ENSP00000424846.1:p.Pro166Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.497C>T
  hgvsp: ENSP00000409746.2:p.Pro166Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.603C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.668C>T
  hgvsp: ENSP00000422168.2:p.Pro223Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.497C>T
  hgvsp: ENSP00000424917.1:p.Pro166Leu
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.947C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.235C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*382C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.449C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro223Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

4-2829026-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829026
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829026
    reference: chr 4
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*383G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.948G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.975G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.498G>A
  hgvsp: ENST00000511747.1:c.498G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.604G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.498G>A
  hgvsp: ENST00000512014.1:c.498G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.498G>A
  hgvsp: ENST00000504294.1:c.498G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.236G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.498G>A
  hgvsp: ENST00000508385.1:c.498G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.669G>A
  hgvsp: ENST00000503393.2:c.669G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.582G>A
  hgvsp: ENST00000442312.2:c.582G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.498G>A
  hgvsp: ENST00000435136.2:c.498G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.450G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.498G>A
  hgvsp: ENST00000452765.2:c.498G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.516G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.498G>A
  hgvsp: ENST00000356331.5:c.498G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro223Pro
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

4-2829034-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829034
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829034
    reference: chr 4
allele count: 15
allele frequency: 1.235564488229189e-4
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.677C>T
  hgvsp: ENSP00000422168.2:p.Thr226Met
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.506C>T
  hgvsp: ENSP00000423275.1:p.Thr169Met
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.506C>T
  hgvsp: ENSP00000424917.1:p.Thr169Met
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.590C>T
  hgvsp: ENSP00000388152.2:p.Thr197Met
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.506C>T
  hgvsp: ENSP00000409746.2:p.Thr169Met
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.956C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.524C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.506C>T
  hgvsp: ENSP00000424846.1:p.Thr169Met
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.458C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.506C>T
  hgvsp: ENSP00000424105.1:p.Thr169Met
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.506C>T
  hgvsp: ENSP00000403231.2:p.Thr169Met
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.506C>T
  hgvsp: ENSP00000348685.5:p.Thr169Met
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.244C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.612C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*391C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.983C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr226Met
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

4-2829035-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829035
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829035
    reference: chr 4
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.957G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.507G>A
  hgvsp: ENST00000356331.5:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.507G>A
  hgvsp: ENST00000508385.1:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.459G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.507G>A
  hgvsp: ENST00000435136.2:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.984G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.245G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.507G>A
  hgvsp: ENST00000504294.1:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.507G>A
  hgvsp: ENST00000452765.2:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.507G>A
  hgvsp: ENST00000512014.1:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.678G>A
  hgvsp: ENST00000503393.2:c.678G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*392G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.507G>A
  hgvsp: ENST00000511747.1:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.525G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.613G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.591G>A
  hgvsp: ENST00000442312.2:c.591G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10945
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr226Thr
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

4-2829039-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829039
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829039
    reference: chr 4
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.511A>G
  hgvsp: ENSP00000424105.1:p.Asn171Asp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.682A>G
  hgvsp: ENSP00000422168.2:p.Asn228Asp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.617A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.529A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.511A>G
  hgvsp: ENSP00000424846.1:p.Asn171Asp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.511A>G
  hgvsp: ENSP00000423275.1:p.Asn171Asp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.511A>G
  hgvsp: ENSP00000348685.5:p.Asn171Asp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.249A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.511A>G
  hgvsp: ENSP00000424917.1:p.Asn171Asp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.961A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.595A>G
  hgvsp: ENSP00000388152.2:p.Asn199Asp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*396A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.511A>G
  hgvsp: ENSP00000403231.2:p.Asn171Asp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.511A>G
  hgvsp: ENSP00000409746.2:p.Asn171Asp
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.988A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.463A>G
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn228Asp
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

4-2829040-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829040
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829040
    reference: chr 4
allele count: 4
allele frequency: 3.294947198471145e-5
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.512A>G
  hgvsp: ENSP00000424105.1:p.Asn171Ser
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.512A>G
  hgvsp: ENSP00000348685.5:p.Asn171Ser
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.512A>G
  hgvsp: ENSP00000409746.2:p.Asn171Ser
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.596A>G
  hgvsp: ENSP00000388152.2:p.Asn199Ser
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.464A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.512A>G
  hgvsp: ENSP00000423275.1:p.Asn171Ser
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.989A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.962A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*397A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.512A>G
  hgvsp: ENSP00000424917.1:p.Asn171Ser
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.512A>G
  hgvsp: ENSP00000403231.2:p.Asn171Ser
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.683A>G
  hgvsp: ENSP00000422168.2:p.Asn228Ser
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.530A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.618A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.250A>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.512A>G
  hgvsp: ENSP00000424846.1:p.Asn171Ser
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn228Ser
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

4-2829041-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829041
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829041
    reference: chr 4
allele count: 3
allele frequency: 2.471251112063001e-5
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*398T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.513T>C
  hgvsp: ENST00000512014.1:c.513T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.251T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000511663
  gene symbol: SH3BP2
  hgvsc: ENST00000511663.1:n.963T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.513T>C
  hgvsp: ENST00000452765.2:c.513T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.513T>C
  hgvsp: ENST00000356331.5:c.513T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.684T>C
  hgvsp: ENST00000503393.2:c.684T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.513T>C
  hgvsp: ENST00000435136.2:c.513T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.513T>C
  hgvsp: ENST00000508385.1:c.513T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.531T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.465T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.597T>C
  hgvsp: ENST00000442312.2:c.597T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.619T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.990T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000423275
  ensembl transcript: ENST00000504294
  gene symbol: SH3BP2
  hgvsc: ENST00000504294.1:c.513T>C
  hgvsp: ENST00000504294.1:c.513T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.513T>C
  hgvsp: ENST00000511747.1:c.513T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn228Asn
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP

4-2829050-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829050
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829050
    reference: chr 4
allele count: 11
allele frequency: 9.062149871482238e-5
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.517+5G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.535+5G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.255+5G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.517+5G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.688+5G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.994+5G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.601+5G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.517+5G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.517+5G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.469+5G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.623+5G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*402+5G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.517+5G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.517+5G>A
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10905
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: c.688+5G>A
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP

4-2829054-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829054
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829054
    reference: chr 4
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.517+9T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.255+9T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.994+9T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.535+9T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.601+9T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.623+9T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.517+9T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.517+9T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*402+9T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.517+9T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.688+9T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.469+9T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.517+9T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.517+9T>C
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10880
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS

4-2829060-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829060
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829060
    reference: chr 4
allele count: 4
allele frequency: 3.296359171295305e-5
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.688+15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.517+15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.517+15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.517+15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.255+15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.535+15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*402+15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.623+15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.601+15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.469+15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.517+15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.517+15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.994+15C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.517+15C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

4-2829061-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829061
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829061
    reference: chr 4
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.994+16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*402+16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.517+16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.601+16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.517+16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.517+16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.517+16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.517+16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.623+16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.517+16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.688+16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.255+16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.469+16G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.535+16G>A
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

4-2829073-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829073
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829073
    reference: chr 4
allele count: 7
allele frequency: 5.772910206505245e-5
allele num: 121256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.601+28C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.688+28C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.994+28C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.623+28C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.517+28C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.469+28C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*402+28C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.535+28C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.255+28C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.517+28C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.517+28C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.517+28C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.517+28C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.517+28C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

4-2829074-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829074
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829074
    reference: chr 4
allele count: 4
allele frequency: 3.298425002061515e-5
allele num: 121270
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.255+29G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.517+29G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.623+29G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.517+29G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.517+29G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*402+29G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.688+29G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.601+29G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.517+29G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.469+29G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.535+29G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.517+29G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.994+29G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.517+29G>A
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

4-2829074-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829074
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829074
    reference: chr 4
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.601+29G>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.688+29G>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*402+29G>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.469+29G>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.517+29G>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.255+29G>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.535+29G>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.517+29G>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.623+29G>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.517+29G>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.994+29G>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.517+29G>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.517+29G>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.517+29G>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

4-2829077-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829077
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829077
    reference: chr 4
allele count: 90552
allele frequency: 7.480668825589849e-1
allele num: 121048
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.994+32T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.601+32T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.688+32T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.517+32T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.517+32T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.623+32T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.255+32T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.517+32T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.517+32T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.517+32T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.535+32T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.517+32T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.469+32T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*402+32T>C
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6322
  bin: 3.25e1
  variant carriers: 5928
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 8.25e1
  variant carriers: 994
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 5.75e1
  variant carriers: 3954
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 7.25e1
  variant carriers: 1656
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 8.75e1
  variant carriers: 802
genotype depth: GenotypeDepth
  all individuals: 5094
  bin: 2.25e1
  variant carriers: 2529
genotype depth: GenotypeDepth
  all individuals: 3650
  bin: 9.75e1
  variant carriers: 3637
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 2.75e1
  variant carriers: 4449
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.25e1
  variant carriers: 221
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 1.75e1
  variant carriers: 918
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 9.25e1
  variant carriers: 636
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 6.75e1
  variant carriers: 2295
genotype quality: GenotypeQuality
num of homozygotes: 34460
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

4-2829078-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829078
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829078
    reference: chr 4
allele count: 1
allele frequency: 8.258047467256841e-6
allele num: 121094
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.517+33G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.469+33G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.535+33G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.688+33G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.255+33G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.623+33G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.517+33G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.601+33G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*402+33G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.517+33G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.994+33G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.517+33G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.517+33G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.517+33G>A
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5728
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-2829085-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829085
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829085
    reference: chr 4
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.517+40C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.601+40C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.994+40C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.469+40C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*402+40C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.517+40C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.255+40C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.688+40C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.517+40C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.517+40C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.623+40C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.535+40C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.517+40C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.517+40C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11346
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

4-2829292-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829292
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829292
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 29988
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.518-41T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.995-41T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.689-41T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*403-41T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.518-41T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.470-41T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.518-41T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.518-41T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.602-41T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.518-41T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.624-41T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.536-41T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.518-41T>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.256-41T>C
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26522
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

4-2829295-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829295
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829295
    reference: chr 4
allele count: 2
allele frequency: 6.626027034190299e-5
allele num: 30184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.518-38G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.518-38G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.536-38G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.518-38G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.518-38G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.689-38G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.624-38G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.470-38G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.256-38G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.995-38G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*403-38G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.518-38G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.602-38G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.518-38G>A
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17684
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27038
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

4-2829296-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829296
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829296
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 30276
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.602-37C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.689-37C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.256-37C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.624-37C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.518-37C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.518-37C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.518-37C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*403-37C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.995-37C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.518-37C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.518-37C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.536-37C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.518-37C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.470-37C>G
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27214
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17451
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS

4-2829297-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829297
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829297
    reference: chr 4
allele count: 6
allele frequency: 1.977717713758323e-4
allele num: 30338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.624-36C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.470-36C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.602-36C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*403-36C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.518-36C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.518-36C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.518-36C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.518-36C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.256-36C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.518-36C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.536-36C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.518-36C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.689-36C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.995-36C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27491
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

4-2829298-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829298
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829298
    reference: chr 4
allele count: 3
allele frequency: 9.874917709019091e-5
allele num: 30380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.518-35G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.518-35G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.518-35G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.602-35G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.689-35G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.256-35G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.536-35G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.995-35G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*403-35G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.470-35G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.518-35G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.518-35G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.624-35G>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.518-35G>A
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16490
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28060
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

4-2829299-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829299
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829299
    reference: chr 4
allele count: 1
allele frequency: 3.252878797735996e-5
allele num: 30742
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.995-34G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.518-34G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.602-34G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.624-34G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.518-34G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.470-34G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*403-34G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.256-34G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.518-34G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.518-34G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.689-34G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.536-34G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.518-34G>C
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.518-34G>C
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4595
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28473
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

4-2829309-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829309
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829309
    reference: chr 4
allele count: 1
allele frequency: 3.126758801826027e-5
allele num: 31982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.256-24C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.536-24C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.689-24C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.518-24C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.602-24C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.518-24C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.518-24C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.470-24C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.995-24C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*403-24C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.518-24C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.624-24C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.518-24C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.518-24C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12823
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/4-2829314-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829314
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829314
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 33074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.995-19C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.256-19C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.518-19C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.518-19C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.518-19C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.602-19C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.689-19C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.536-19C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.518-19C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.518-19C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*403-19C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.624-19C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.518-19C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.470-19C>A
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32137
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

4-2829314-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829314
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829314
    reference: chr 4
allele count: 2
allele frequency: 6.047046018020197e-5
allele num: 33074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*403-19C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.689-19C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.624-19C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.602-19C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.518-19C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.518-19C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.536-19C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.470-19C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.518-19C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.256-19C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.518-19C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.518-19C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.518-19C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.995-19C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32137
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5289
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/4-2829315-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829315
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829315
    reference: chr 4
allele count: 334
allele frequency: 9.931018078020933e-3
allele num: 33632
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.624-18C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.518-18C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.518-18C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.995-18C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*403-18C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.602-18C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.689-18C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.256-18C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.470-18C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.518-18C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.518-18C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.518-18C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.518-18C>A
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.536-18C>A
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 1.25e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10704
  bin: 2.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 1.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 32253
  bin: 7.5e0
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
num of homozygotes: 9
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

4-2829315-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829315
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829315
    reference: chr 4
allele count: 23
allele frequency: 6.83872502378687e-4
allele num: 33632
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.689-18C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.470-18C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.518-18C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.536-18C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*403-18C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.256-18C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.602-18C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.518-18C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.518-18C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.995-18C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.624-18C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.518-18C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.518-18C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.518-18C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10704
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

4-2829317-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829317
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829317
    reference: chr 4
allele count: 5
allele frequency: 1.442668359397542e-4
allele num: 34658
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.602-16C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.470-16C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.518-16C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.689-16C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.518-16C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.518-16C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*403-16C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.256-16C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.518-16C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.536-16C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.518-16C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.624-16C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.995-16C>G
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.518-16C>G
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32724
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 10120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

4-2829317-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2829317
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 2829317
    reference: chr 4
allele count: 1
allele frequency: 2.885336718795083e-5
allele num: 34658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515802
  gene symbol: SH3BP2
  hgvsc: ENST00000515802.1:n.624-16C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422605
  ensembl transcript: ENST00000515737
  gene symbol: SH3BP2
  hgvsc: ENST00000515737.1:c.*403-16C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000422168
  ensembl transcript: ENST00000503393
  gene symbol: SH3BP2
  hgvsc: ENST00000503393.2:c.689-16C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000409746
  ensembl transcript: ENST00000452765
  gene symbol: SH3BP2
  hgvsc: ENST00000452765.2:c.518-16C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424846
  ensembl transcript: ENST00000511747
  gene symbol: SH3BP2
  hgvsc: ENST00000511747.1:c.518-16C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000515183
  gene symbol: SH3BP2
  hgvsc: ENST00000515183.1:n.256-16C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000504450
  gene symbol: SH3BP2
  hgvsc: ENST00000504450.1:n.470-16C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424917
  ensembl transcript: ENST00000508385
  gene symbol: SH3BP2
  hgvsc: ENST00000508385.1:c.518-16C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000403231
  ensembl transcript: ENST00000435136
  gene symbol: SH3BP2
  hgvsc: ENST00000435136.2:c.518-16C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000510204
  gene symbol: SH3BP2
  hgvsc: ENST00000510204.1:n.995-16C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000424105
  ensembl transcript: ENST00000512014
  gene symbol: SH3BP2
  hgvsc: ENST00000512014.1:c.518-16C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000348685
  ensembl transcript: ENST00000356331
  gene symbol: SH3BP2
  hgvsc: ENST00000356331.5:c.518-16C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl protein: ENSP00000388152
  ensembl transcript: ENST00000442312
  gene symbol: SH3BP2
  hgvsc: ENST00000442312.2:c.602-16C>T
  variant of: http://identifiers.org/hgnc/10825
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000087266
  ensembl transcript: ENST00000505941
  gene symbol: SH3BP2
  hgvsc: ENST00000505941.1:n.536-16C>T
  variant of: http://identifiers.org/hgnc/10825
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 783
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3921
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 786
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1000
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 520
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 846
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 83
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1761
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2130
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5754
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2882
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4359
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2509
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37332
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.568627450980392e-5
allele num: 63750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.525219e6

MQRankSum
type: SiteQuality
SIO_000300: -1.369e0

QD
type: SiteQuality
SIO_000300: 1.165e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.49e0

VQSLOD
type: SiteQuality
SIO_000300: -1.773e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.213e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.782e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.83e-1

GenotypeDepth
all individuals: 38548
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9599
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 565
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 520
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1160
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 118
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4509
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 365
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 83
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1387
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38561
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2339
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6169
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1936
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4409
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2744
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.979414093428345e-4
allele num: 10104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65258
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.729e1

DP
type: SiteQuality
SIO_000300: 1.564539e6

MQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.341e0

VQSLOD
type: SiteQuality
SIO_000300: -2.753e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.31e-1

FS
type: SiteQuality
SIO_000300: 1.061e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

QD
type: SiteQuality
SIO_000300: 1.351e1

GenotypeDepth
all individuals: 1160
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 788
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 875
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 644
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4509
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9599
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1257
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 83
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 520
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6169
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1387
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4409
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 210
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1936
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38561
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2744
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2339
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.231830500123183e-4
allele num: 16236
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.31e-1

FS
type: SiteQuality
SIO_000300: 1.061e0

DP
type: SiteQuality
SIO_000300: 1.564539e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.341e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.753e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.351e1

MQ
type: SiteQuality
SIO_000300: 5.729e1

GenotypeDepth
all individuals: 526
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1182
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 646
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 38485
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4598
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 892
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 520
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38638
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6174
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1941
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2338
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2751
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4412
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 149
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.118827632625589e-5
allele num: 65372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

FS
type: SiteQuality
SIO_000300: 8.022e0

QD
type: SiteQuality
SIO_000300: 1.401e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 1.569683e6

GenotypeDepth
all individuals: 444
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 798
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4727
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 646
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 275
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 904
bin: 4.25e1
variant carriers: 2

GenotypeDepth
all individuals: 788
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1204
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2790
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6278
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2362
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 897
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1971
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38893
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4434
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 181
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.61591421434229e-5
allele num: 65652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.225640397107489e-4
allele num: 16318
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.85e-1

QD
type: SiteQuality
SIO_000300: 1.558e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-2

DP
type: SiteQuality
SIO_000300: 1.57719e6

GenotypeDepth
all individuals: 4847
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 521
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 362
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 649
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 787
bin: 5.25e1
variant carriers: 2

GenotypeDepth
all individuals: 38496
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 801
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 41
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 914
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6402
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2852
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4447
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2393
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39030
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1994
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.066488716330988e-5
allele num: 65936
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.698677800974252e-5
allele num: 11496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.953125e-4
allele num: 10240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.61e0

DP
type: SiteQuality
SIO_000300: 1.585221e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
SIO_000300: 1.502e1

GenotypeDepth
all individuals: 316
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 158
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 790
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38439
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 926
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 522
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4914
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1273
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6457
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2420
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2874
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4466
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 39182
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.218620521569583e-4
allele num: 16412
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.494874184529357e-4
allele num: 8584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66050
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.575e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 7.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.08e0

DP
type: SiteQuality
SIO_000300: 1.589453e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.36e-1

GenotypeDepth
all individuals: 165
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38447
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 263
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1281
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10349
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 791
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4972
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 926
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 805
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 648
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6524
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2041
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2901
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39321
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4474
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511670093118878e-5
allele num: 66152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

DP
type: SiteQuality
SIO_000300: 1.592756e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

VQSLOD
type: SiteQuality
SIO_000300: 9.2e-2

QD
type: SiteQuality
SIO_000300: 9.640000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 8.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

GenotypeDepth
all individuals: 118
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38475
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 927
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 200
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 790
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1292
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2470
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4477
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2916
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6572
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2043
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39627
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.071645415907711e-5
allele num: 16470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.404e0

QD
type: SiteQuality
SIO_000300: 1.316e1

FS
type: SiteQuality
SIO_000300: 1.095e0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 1.597295e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
SIO_000300: 9.95e-1

GenotypeDepth
all individuals: 5051
bin: 3.25e1
variant carriers: 2

GenotypeDepth
all individuals: 84
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1300
bin: 3.75e1
variant carriers: 2

GenotypeDepth
all individuals: 10537
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 38442
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 520
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 158
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 41
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 808
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4487
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 39630
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2043
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2473
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2911
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6573
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.654373431164318e-5
allele num: 10358
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.601456815816858e-4
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.02990834539315e-5
allele num: 66336
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.035454103933948e-4
allele num: 16472
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.28e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.8e-1

FS
type: SiteQuality
SIO_000300: 2.014e0

DP
type: SiteQuality
SIO_000300: 1.598715e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.265e0

MQRankSum
type: SiteQuality
SIO_000300: 3.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-1

QD
type: SiteQuality
SIO_000300: 1.214e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeDepth
all individuals: 5089
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 934
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 810
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 791
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10589
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1308
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4488
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39613
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2038
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2917
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2471
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6569
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73370319001387e-4
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.600315e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.58e0

QD
type: SiteQuality
SIO_000300: 1.219e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.94e-1

GenotypeDepth
all individuals: 5098
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38421
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 97
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 931
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1301
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10614
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 649
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 522
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 791
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 811
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4494
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2477
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2927
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6624
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2041
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39722
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.598302442404296e-4
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66406
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.95e-1

DP
type: SiteQuality
SIO_000300: 1.601243e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.053e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.881e0

QD
type: SiteQuality
SIO_000300: 1.287e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-2

GenotypeDepth
all individuals: 196
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 791
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10647
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38454
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 813
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39777
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2490
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2936
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6625
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4493
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66442
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.899e1

VQSLOD
type: SiteQuality
SIO_000300: 9.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.152e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.99e-1

DP
type: SiteQuality
SIO_000300: 1.602384e6

QD
type: SiteQuality
SIO_000300: 1.218e1

GenotypeDepth
all individuals: 5138
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 649
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 521
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 814
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38425
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 158
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2485
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4496
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2943
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6631
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2048
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39788
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66478
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.804e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 1.279e1

FS
type: SiteQuality
SIO_000300: 1.151e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.344e0

DP
type: SiteQuality
SIO_000300: 1.603826e6

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-1

GenotypeDepth
all individuals: 120
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 930
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5146
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 521
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1310
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 811
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2945
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6653
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2050
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4498
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39825
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2495
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

FS
type: SiteQuality
SIO_000300: 5.854e0

MQRankSum
type: SiteQuality
SIO_000300: 3.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.64e-1

DP
type: SiteQuality
SIO_000300: 1.603964e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 1.229e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 650
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 811
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 793
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10769
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 38429
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 929
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1314
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39883
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 941
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6670
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2950
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2056
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4501
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.422e0

DP
type: SiteQuality
SIO_000300: 1.605534e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.19e-1

FS
type: SiteQuality
SIO_000300: 4.961e0

QD
type: SiteQuality
SIO_000300: 1.469e1

GenotypeDepth
all individuals: 100
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10825
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 934
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 521
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 649
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 74
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 793
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1313
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5183
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 814
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 38380
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6677
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4502
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2061
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39874
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 943
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2960
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502042778178322e-5
allele num: 66576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.154e1

DP
type: SiteQuality
SIO_000300: 1.606607e6

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 814
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10827
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 793
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1313
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 38404
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 932
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 63
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5198
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 649
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6697
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39923
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2063
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2963
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4508
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501456412720339e-5
allele num: 66602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.91e-1

MQ
type: SiteQuality
SIO_000300: 5.893e1

VQSLOD
type: SiteQuality
SIO_000300: -6.202e-1

FS
type: SiteQuality
SIO_000300: 4.363e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.607146e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e-1

QD
type: SiteQuality
SIO_000300: 9.039999999999999e0

GenotypeDepth
all individuals: 933
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 816
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 649
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10869
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1316
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 793
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4513
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6708
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2067
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2514
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39960
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2973
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.02e-1

QD
type: SiteQuality
SIO_000300: 1.225e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.017e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

VQSLOD
type: SiteQuality
SIO_000300: -3.164e-1

DP
type: SiteQuality
SIO_000300: 1.608217e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

FS
type: SiteQuality
SIO_000300: 6.395e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.05e-1

GenotypeDepth
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 794
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5213
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10868
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 87
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 522
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38386
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1321
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 938
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2967
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 859
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2063
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39948
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2512
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6702
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4521
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

DP
type: SiteQuality
SIO_000300: 1.608943e6

FS
type: SiteQuality
SIO_000300: 5.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.27e0

QD
type: SiteQuality
SIO_000300: 1.266e1

GenotypeDepth
all individuals: 1321
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 794
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 522
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5213
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 816
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 938
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38386
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 650
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 43
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39948
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4521
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6702
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 859
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2512
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2967
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2063
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.502550867294881e-5
allele num: 66644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.98e1

FS
type: SiteQuality
SIO_000300: 5.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

DP
type: SiteQuality
SIO_000300: 1.608943e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.266e1

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

GenotypeDepth
all individuals: 10874
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 823
bin: 4.75e1
variant carriers: 4

GenotypeDepth
all individuals: 378
bin: 6.75e1
variant carriers: 3

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5206
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 523
bin: 6.25e1
variant carriers: 4

GenotypeDepth
all individuals: 938
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 38347
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 651
bin: 5.75e1
variant carriers: 3

GenotypeDepth
all individuals: 235
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 65
bin: 8.75e1
variant carriers: 4

GenotypeDepth
all individuals: 163
bin: 7.75e1
variant carriers: 6

GenotypeDepth
all individuals: 102
bin: 9.75e1
variant carriers: 17

GenotypeDepth
all individuals: 49
bin: 9.25e1
variant carriers: 7

GenotypeDepth
all individuals: 799
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2965
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4567
bin: 9.75e1
variant carriers: 56

GenotypeQuality
all individuals: 2515
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6699
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2061
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39928
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 49
allele frequency: 7.352279206554031e-4
allele num: 66646
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.884060757546626e-4
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.22e0

DP
type: SiteQuality
SIO_000300: 1.612348e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.58e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.282e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.49e-1

GenotypeDepth
all individuals: 235
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10898
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5230
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 941
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 91
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 379
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 827
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38339
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 159
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 522
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 651
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6725
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2529
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39931
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2972
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4545
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2072
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.62e0

MQRankSum
type: SiteQuality
SIO_000300: -1.76e-1

QD
type: SiteQuality
SIO_000300: 9.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.739e0

DP
type: SiteQuality
SIO_000300: 1.611235e6

MQ
type: SiteQuality
SIO_000300: 5.87e1

VQSLOD
type: SiteQuality
SIO_000300: -1.473e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

GenotypeDepth
all individuals: 1326
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 91
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5230
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 944
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 235
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 379
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38330
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 827
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 159
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10909
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2531
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6724
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2075
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39934
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2978
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4550
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.195e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.391e1

FS
type: SiteQuality
SIO_000300: 1.328e0

VQSLOD
type: SiteQuality
SIO_000300: 3.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

DP
type: SiteQuality
SIO_000300: 1.611498e6

GenotypeDepth
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 653
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 10916
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 801
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 946
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 66
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 102
bin: 9.75e1
variant carriers: 11

GenotypeDepth
all individuals: 829
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 520
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5236
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38314
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 235
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6723
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4570
bin: 9.75e1
variant carriers: 21

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39914
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2979
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2533
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998590662388677e-5
allele num: 66698
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.239341085271318e-4
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.77336327517706e-4
allele num: 11578
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.52e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.99e-1

QD
type: SiteQuality
SIO_000300: 1.171e1

DP
type: SiteQuality
SIO_000300: 1.613495e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.34e-1

GenotypeDepth
all individuals: 382
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 235
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 159
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 652
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5248
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 521
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1332
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38292
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 804
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 94
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39911
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4563
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6722
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2537
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2981
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2081
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.807e0

VQSLOD
type: SiteQuality
SIO_000300: -6.832e-1

QD
type: SiteQuality
SIO_000300: 1.298e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.612786e6

MQRankSum
type: SiteQuality
SIO_000300: -9.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e0

GenotypeDepth
all individuals: 552
bin: 6.25e1
variant carriers: 34

GenotypeDepth
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10806
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5193
bin: 3.25e1
variant carriers: 6

GenotypeDepth
all individuals: 267
bin: 7.25e1
variant carriers: 37

GenotypeDepth
all individuals: 1324
bin: 3.75e1
variant carriers: 9

GenotypeDepth
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 420
bin: 6.75e1
variant carriers: 40

GenotypeDepth
all individuals: 684
bin: 5.75e1
variant carriers: 32

GenotypeDepth
all individuals: 406
bin: 9.75e1
variant carriers: 322

GenotypeDepth
all individuals: 78
bin: 9.25e1
variant carriers: 36

GenotypeDepth
all individuals: 949
bin: 4.25e1
variant carriers: 11

GenotypeDepth
all individuals: 95
bin: 8.75e1
variant carriers: 31

GenotypeQuality
all individuals: 6649
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2945
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2051
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 859
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39493
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5190
bin: 9.75e1
variant carriers: 678

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 28
allele frequency: 2.418379685610641e-3
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 48
allele frequency: 2.906976744186046e-3
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 1.249759661603538e-3
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 584
allele frequency: 8.755622188905547e-3
allele num: 66700
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 7
allele frequency: 1.058361052313275e-3
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.106e0

DP
type: SiteQuality
SIO_000300: 1.661141e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQ
type: SiteQuality
SIO_000300: 5.966e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.758e0

VQSLOD
type: SiteQuality
SIO_000300: 4.24e0

QD
type: SiteQuality
SIO_000300: 1.147e1

GenotypeDepth
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10898
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1002
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 854
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 401
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 567
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 131
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 246
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 118
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5287
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2092
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4870
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2516
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6695
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2998
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39607
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.408e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

QD
type: SiteQuality
SIO_000300: 3.104e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 6.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.207e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

DP
type: SiteQuality
SIO_000300: 1.628137e6

GenotypeDepth
all individuals: 883
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 854
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 567
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1401
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5287
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 401
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 9.75e1
variant carriers: 12

GenotypeDepth
all individuals: 78
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 247
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 132
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 982
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39593
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6690
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4889
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2516
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2998
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 2.99805126667666e-4
allele num: 66710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.6e-2

QD
type: SiteQuality
SIO_000300: 1.161e1

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

DP
type: SiteQuality
SIO_000300: 1.629855e6

FS
type: SiteQuality
SIO_000300: 5.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.49e-1

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 889
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 855
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5291
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 568
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 698
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1403
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1004
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 403
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 248
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39601
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6689
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4885
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2998
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2518
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 4.493e0

QD
type: SiteQuality
SIO_000300: 1.302e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 1.628838e6

GenotypeDepth
all individuals: 175
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 568
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5291
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 403
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10915
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 698
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 854
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 887
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 247
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1405
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3001
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4884
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39606
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2521
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2092
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6692
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.54e-1

DP
type: SiteQuality
SIO_000300: 1.629075e6

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.35e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
SIO_000300: 1.11e1

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 856
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1008
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 37844
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 698
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 887
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 403
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 175
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10921
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 568
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39608
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6693
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4885
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3004
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2094
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

QD
type: SiteQuality
SIO_000300: 1.208e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -9.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e-1

FS
type: SiteQuality
SIO_000300: 4.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

VQSLOD
type: SiteQuality
SIO_000300: 3.14e-1

DP
type: SiteQuality
SIO_000300: 1.629301e6

GenotypeDepth
all individuals: 247
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 403
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 698
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1008
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5299
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 175
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 856
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 887
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 568
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6693
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2094
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3004
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4885
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39608
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.82e-1

DP
type: SiteQuality
SIO_000300: 1.629301e6

FS
type: SiteQuality
SIO_000300: 4.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.208e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.14e-1

GenotypeDepth
all individuals: 178
bin: 7.75e1
variant carriers: 3

GenotypeDepth
all individuals: 45
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1007
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 78
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 887
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5301
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10919
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 698
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 249
bin: 7.25e1
variant carriers: 2

GenotypeDepth
all individuals: 1405
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 568
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3003
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6692
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2095
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39594
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4899
bin: 9.75e1
variant carriers: 14

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.295560545862843e-3
allele num: 11578
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.38e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.025e-1

FS
type: SiteQuality
SIO_000300: 3.378e0

DP
type: SiteQuality
SIO_000300: 1.63016e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.2e-1

QD
type: SiteQuality
SIO_000300: 1.232e1

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10930
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 570
bin: 6.25e1
variant carriers: 2

GenotypeDepth
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 247
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 859
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5303
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 175
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 404
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2517
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6688
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39575
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2998
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4893
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2092
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.41e-1

DP
type: SiteQuality
SIO_000300: 1.630028e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.291e1

MQRankSum
type: SiteQuality
SIO_000300: -2.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-2

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

VQSLOD
type: SiteQuality
SIO_000300: 8.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

GenotypeDepth
all individuals: 44
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 247
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 403
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 892
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1413
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5307
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 568
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1010
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 700
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4894
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2999
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39580
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2522
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6689
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2092
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.58e-1

FS
type: SiteQuality
SIO_000300: 1.2661e1

VQSLOD
type: SiteQuality
SIO_000300: -1.77e0

QD
type: SiteQuality
SIO_000300: 9.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.107e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.908e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.629893e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeDepth
all individuals: 37759
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10942
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 701
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 403
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 569
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5305
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 857
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 45
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 124
bin: 9.75e1
variant carriers: 4

GenotypeDepth
all individuals: 894
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2515
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6692
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4906
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2994
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2092
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39570
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.774706288873532e-4
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

FS
type: SiteQuality
SIO_000300: 5.649999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.49e0

DP
type: SiteQuality
SIO_000300: 1.630589e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

QD
type: SiteQuality
SIO_000300: 1.174e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeDepth
all individuals: 37741
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 247
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 568
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1414
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 858
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 702
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1013
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 175
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39545
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6685
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2992
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4900
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2516
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.629857e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.177e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 6.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.93e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.28e-1

GenotypeDepth
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10944
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5304
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1415
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 892
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 247
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 858
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 702
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2514
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6688
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4900
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2093
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2993
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39542
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.629703e6

FS
type: SiteQuality
SIO_000300: 5.534e0

VQSLOD
type: SiteQuality
SIO_000300: 7.91e-1

QD
type: SiteQuality
SIO_000300: 1.502e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e-1

GenotypeDepth
all individuals: 1416
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 702
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 569
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5307
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 37726
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 122
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 247
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6685
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39542
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2093
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2992
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4903
bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994305409860632e-5
allele num: 66730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
type: SiteQuality
SIO_000300: -7.881e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.3e-2

FS
type: SiteQuality
SIO_000300: 1.2888e1

QD
type: SiteQuality
SIO_000300: 1.326e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.51e-1

DP
type: SiteQuality
SIO_000300: 1.630071e6

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5305
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1416
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 404
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 893
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37724
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 858
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10939
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 702
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 569
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2991
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39544
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4904
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2093
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6687
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.882952142994427e-4
allele num: 10406
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.029e0

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

MQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

QD
type: SiteQuality
SIO_000300: 1.378e1

FS
type: SiteQuality
SIO_000300: 6.054e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.47e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.629875e6

GenotypeDepth
all individuals: 893
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 703
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1014
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 121
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1417
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 131
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 248
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 406
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4917
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 39402
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2089
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2510
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2988
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.648582219291409e-4
allele num: 66724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.775e0

QD
type: SiteQuality
SIO_000300: 1.271e1

DP
type: SiteQuality
SIO_000300: 1.629495e6

GenotypeDepth
all individuals: 120
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 893
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 861
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 77
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 175
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4911
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 988
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6663
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2991
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2507
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39190
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.93e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

QD
type: SiteQuality
SIO_000300: 1.245e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 1.628233e6

MQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

FS
type: SiteQuality
SIO_000300: 2.483e0

GenotypeDepth
all individuals: 10830
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 248
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 573
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 77
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2084
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4918
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 179
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6620
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38866
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 991
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2979
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728608470181504e-4
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998410842253606e-5
allele num: 66702
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.094e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e-1

DP
type: SiteQuality
SIO_000300: 1.627507e6

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-1

QD
type: SiteQuality
SIO_000300: 8.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e-1

GenotypeDepth
all individuals: 37130
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 403
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5327
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 251
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4922
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 38644
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2081
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6596
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2974
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.73e-1

FS
type: SiteQuality
SIO_000300: 1.334e0

MQRankSum
type: SiteQuality
SIO_000300: 1.61e-1

QD
type: SiteQuality
SIO_000300: 1.35e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.934e0

DP
type: SiteQuality
SIO_000300: 1.627541e6

GenotypeDepth
all individuals: 1075
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 36203
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 121
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 44
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 715
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 5427
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4999
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 35936
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2507
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2995
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 897
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2120
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6462
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.502550867294881e-5
allele num: 66644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.65e-1

QD
type: SiteQuality
SIO_000300: 1.406e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.73e-1

DP
type: SiteQuality
SIO_000300: 1.631858e6

VQSLOD
type: SiteQuality
SIO_000300: 3.32e0

FS
type: SiteQuality
SIO_000300: 1.572e0

MQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.44e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeDepth
all individuals: 130
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 121
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 573
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 249
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 77
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35650
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 887
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2123
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6474
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3014
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5007
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1053
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923446816695518e-4
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.633375e6

MQ
type: SiteQuality
SIO_000300: 5.955e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.63e-1

FS
type: SiteQuality
SIO_000300: 1.569e0

MQRankSum
type: SiteQuality
SIO_000300: -1.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.843e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.38e-1

QD
type: SiteQuality
SIO_000300: 1.291e1

GenotypeDepth
all individuals: 573
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 77
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 881
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 249
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 175
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6474
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35650
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2123
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3014
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 887
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1053
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5007
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

QD
type: SiteQuality
SIO_000300: 1.291e1

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 1.569e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.843e0

MQRankSum
type: SiteQuality
SIO_000300: -1.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

DP
type: SiteQuality
SIO_000300: 1.633375e6

GenotypeDepth
all individuals: 6812
bin: 3.75e1
variant carriers: 6682

GenotypeDepth
all individuals: 5049
bin: 5.25e1
variant carriers: 5003

GenotypeDepth
all individuals: 5765
bin: 4.75e1
variant carriers: 5711

GenotypeDepth
all individuals: 3006
bin: 6.25e1
variant carriers: 2982

GenotypeDepth
all individuals: 6561
bin: 4.25e1
variant carriers: 6476

GenotypeDepth
all individuals: 1300
bin: 7.75e1
variant carriers: 1294

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 32

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 43

GenotypeQuality
all individuals: 771
bin: 8.75e1
variant carriers: 727

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 17

GenotypeQuality
all individuals: 364
bin: 5.25e1
variant carriers: 317

GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 109

GenotypeQuality
all individuals: 687
bin: 7.25e1
variant carriers: 496

GenotypeQuality
all individuals: 100
bin: 2.25e1
variant carriers: 31

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 15

GenotypeQuality
all individuals: 1193
bin: 7.75e1
variant carriers: 1009

GenotypeQuality
all individuals: 151
bin: 3.25e1
variant carriers: 71

GenotypeQuality
all individuals: 155
bin: 4.25e1
variant carriers: 112

GenotypeQuality
all individuals: 48963
bin: 9.75e1
variant carriers: 48813

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 15

GenotypeQuality
all individuals: 1328
bin: 8.25e1
variant carriers: 1200

GenotypeQuality
all individuals: 319
bin: 5.75e1
variant carriers: 279

GenotypeQuality
all individuals: 1226
bin: 6.75e1
variant carriers: 786

GenotypeQuality
all individuals: 1440
bin: 9.25e1
variant carriers: 1387

GenotypeQuality
all individuals: 270
bin: 4.75e1
variant carriers: 227

GenotypeQuality
all individuals: 3347
bin: 6.25e1
variant carriers: 514

East Asian
type: Population
allele count: 4558
allele frequency: 5.312354312354313e-1
allele num: 8580
num of homozygotes: 1158

European (Finnish)
type: Population
allele count: 4482
allele frequency: 6.815693430656934e-1
allele num: 6576
num of homozygotes: 1517

South Asian
type: Population
allele count: 13651
allele frequency: 8.273333333333334e-1
allele num: 16500
num of homozygotes: 5677

Latino
type: Population
allele count: 10156
allele frequency: 8.791551246537396e-1
allele num: 11552
num of homozygotes: 4471

African
type: Population
allele count: 9580
allele frequency: 9.213310251971533e-1
allele num: 10398
num of homozygotes: 4414

Other
type: Population
allele count: 693
allele frequency: 7.649006622516556e-1
allele num: 906
num of homozygotes: 268

European (Non-Finnish)
type: Population
allele count: 47432
allele frequency: 7.128772393892029e-1
allele num: 66536
num of homozygotes: 16955

VQSLOD
type: SiteQuality
SIO_000300: 4.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.11e-2

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 2.529e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-2

DP
type: SiteQuality
SIO_000300: 3.006588e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.035e0

GenotypeDepth
all individuals: 11166
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7510
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1771
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 366
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2377
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1847
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2932
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7059
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15042
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3809
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17791
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3009
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.067e0

DP
type: SiteQuality
SIO_000300: 2.36532e6

VQSLOD
type: SiteQuality
SIO_000300: -3.169e-1

FS
type: SiteQuality
SIO_000300: 1.357e0

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 8.199999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.026e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

GenotypeDepth
all individuals: 3617
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2564
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1346
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10263
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7360
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5214
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2812
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1271
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13409
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6177
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1534
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1834
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3728
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17777
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2920
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4473
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504302304591131e-5
allele num: 66476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.35e1

VQSLOD
type: SiteQuality
SIO_000300: -1.807e0

FS
type: SiteQuality
SIO_000300: 7.389e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.068e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.694e0

MQRankSum
type: SiteQuality
SIO_000300: -2.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.337474e6

GenotypeDepth
all individuals: 272
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1987
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 94
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 154
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 302
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2927
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6538
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1609
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16401
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1523
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14566
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6747
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1336
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1420
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3453
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1190
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1374
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.33612e5

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

QD
type: SiteQuality
SIO_000300: 1.121e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.334e0

GenotypeDepth
all individuals: 94
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1092
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 302
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1876
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14593
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1438
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1616
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5270
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18703
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3456
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3017
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1255
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5961
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 290
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 551
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1336
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1398
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.633986928104575e-3
allele num: 1224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3564
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.39188e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.91e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1

QD
type: SiteQuality
SIO_000300: 9.470000000000001e0

GenotypeDepth
all individuals: 1405
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 512
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 154
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1623
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1433
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5735
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14545
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4698
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19561
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3046
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1335
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3454
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1236
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.93e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.41561e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

QD
type: SiteQuality
SIO_000300: 1.028e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 1091
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17143
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 1406
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 401
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 135
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 302
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1620
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1336
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20091
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5488
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4599
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 288
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1445
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14435
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3459
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 3063
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.172607879924953e-4
allele num: 8528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.403846153846154e-3
allele num: 1248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.781500067815e-5
allele num: 14746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3564
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 6.973500697350069e-4
allele num: 1434
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

DP
type: SiteQuality
SIO_000300: 7.44294e5

FS
type: SiteQuality
SIO_000300: 3.73e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

QD
type: SiteQuality
SIO_000300: 1.368e1

VQSLOD
type: SiteQuality
SIO_000300: 2.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.87e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeDepth
all individuals: 154
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 400
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 95
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 303
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3138
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3451
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1276
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21954
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3525
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1332
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4908
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14205
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 2.791736460078169e-4
allele num: 3582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14724
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 6.896551724137931e-4
allele num: 1450
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.17096018735363e-4
allele num: 8540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1266
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

FS
type: SiteQuality
SIO_000300: 1.11e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.50483e5

QD
type: SiteQuality
SIO_000300: 1.158e1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.93e-2

GenotypeDepth
all individuals: 1092
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16089
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 135
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 400
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 94
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3179
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3277
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4576
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1655
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22964
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3449
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13991
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1339
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1469
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.68985817500669e-5
allele num: 14948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.42e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-1

QD
type: SiteQuality
SIO_000300: 1.156e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.830000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.53707e5

BaseQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

GenotypeDepth
all individuals: 207
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 539
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1092
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 135
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1499
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11692
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3069
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1347
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2957
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3404
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3450
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27044
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1717
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.374298827129016e-5
allele num: 15688
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.359e0

QD
type: SiteQuality
SIO_000300: 4.91e0

MQRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.811e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.34e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

DP
type: SiteQuality
SIO_000300: 7.78066e5

ClippingRankSum
type: SiteQuality
SIO_000300: 6.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 777
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1518
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1403
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 135
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2443
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3452
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 147
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10316
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3568
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28082
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3355
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1739
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1344
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8676
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1768
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16304
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

DP
type: SiteQuality
SIO_000300: 7.94247e5

VQSLOD
type: SiteQuality
SIO_000300: -1.036e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 7.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

FS
type: SiteQuality
SIO_000300: 2.058e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.97e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeDepth
all individuals: 539
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 135
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1403
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 302
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 154
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28082
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10316
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2443
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1739
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3452
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3568
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3355
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1344
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1768
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8676
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.226692836113837e-4
allele num: 16304
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.97e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 7.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

FS
type: SiteQuality
SIO_000300: 2.058e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

DP
type: SiteQuality
SIO_000300: 7.94247e5

VQSLOD
type: SiteQuality
SIO_000300: -1.036e-1

GenotypeDepth
all individuals: 155
bin: 7.75e1
variant carriers: 6

GenotypeDepth
all individuals: 531
bin: 5.25e1
variant carriers: 3

GenotypeDepth
all individuals: 197
bin: 6.75e1
variant carriers: 2

GenotypeDepth
all individuals: 1092
bin: 4.25e1
variant carriers: 7

GenotypeDepth
all individuals: 1935
bin: 2.75e1
variant carriers: 6

GenotypeDepth
all individuals: 263
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3708
bin: 6.25e1
variant carriers: 8

GenotypeQuality
all individuals: 149
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2285
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 3667
bin: 9.75e1
variant carriers: 323

GenotypeQuality
all individuals: 593
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1052
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9934
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 2891
bin: 1.75e1
variant carriers: 9

GenotypeQuality
all individuals: 696
bin: 7.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1718
bin: 2.75e1
variant carriers: 8

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 11

GenotypeQuality
all individuals: 28651
bin: 2.25e1
variant carriers: 10

GenotypeQuality
all individuals: 529
bin: 7.25e1
variant carriers: 11

GenotypeQuality
all individuals: 1350
bin: 6.75e1
variant carriers: 8

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 9

GenotypeQuality
all individuals: 175
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 492
bin: 9.25e1
variant carriers: 21

GenotypeQuality
all individuals: 1495
bin: 3.25e1
variant carriers: 9

GenotypeQuality
all individuals: 295
bin: 8.75e1
variant carriers: 11

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 5

Other
type: Population
allele count: 1
allele frequency: 3.448275862068965e-3
allele num: 290
num of homozygotes: 0

Latino
type: Population
allele count: 19
allele frequency: 1.178660049627792e-2
allele num: 1612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.820609297244811e-4
allele num: 16478
num of homozygotes: 0

African
type: Population
allele count: 311
allele frequency: 7.656326932545544e-2
allele num: 4062
num of homozygotes: 9

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8694
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.17e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

FS
type: SiteQuality
SIO_000300: 3.339e0

DP
type: SiteQuality
SIO_000300: 8.02389e5

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 1.386e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 777
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32253
bin: 7.5e0
variant carriers: 5

GenotypeDepth
all individuals: 1092
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 343
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 115
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 135
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1350
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2891
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28651
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1052
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3667
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 9934
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2285
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 492
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 295
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1495
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3708
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 16
allele frequency: 3.938946331856229e-3
allele num: 4062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 6.203473945409429e-4
allele num: 1612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.150218541522889e-4
allele num: 8694
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 3.034348828741352e-4
allele num: 16478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1796
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.17e-2

FS
type: SiteQuality
SIO_000300: 3.339e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

DP
type: SiteQuality
SIO_000300: 8.02389e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 1.386e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.41e-1

GenotypeDepth
all individuals: 92
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 542
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1414
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 781
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 397
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2199
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1370
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3383
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 640
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9464
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1559
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30391
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4066
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2064
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1920
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.143641354071363e-4
allele num: 8744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.170138076293003e-4
allele num: 17092
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 4.859086491739553e-4
allele num: 4116
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1744
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.85e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.04e0

FS
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

QD
type: SiteQuality
SIO_000300: 1.068e1

DP
type: SiteQuality
SIO_000300: 8.02012e5