2-54001618-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001618
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001618
    reference: chr 2
allele count: 1
allele frequency: 8.761784600287387e-6
allele num: 114132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44911C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8896C>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11804C>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8896C>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12340C>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8896C>G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.511G>C
  hgvsp: ENSP00000295304.4:p.Val171Leu
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8896C>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8896C>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8896C>G
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7391
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2853
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6550
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Val171Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

2-54001623-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001623
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001623
    reference: chr 2
allele count: 4
allele frequency: 3.516730847004624e-5
allele num: 113742
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8901C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8901C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8901C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11799C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8901C>T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.516G>A
  hgvsp: ENST00000295304.4:c.516G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8901C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44916C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8901C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12335C>T
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5210
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27332
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Lys172Lys
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

2-54001627-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001627
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001627
    reference: chr 2
allele count: 1
allele frequency: 8.831893734654584e-6
allele num: 113226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8905G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11795G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8905G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8905G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8905G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.520C>T
  hgvsp: ENSP00000295304.4:p.Arg174Cys
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12331G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8905G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8905G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44920G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5205
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3980
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg174Cys
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

2-54001628-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001628
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001628
    reference: chr 2
allele count: 2
allele frequency: 1.76934781839414e-5
allele num: 113036
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12330C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8906C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8906C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44921C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8906C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8906C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.521G>A
  hgvsp: ENSP00000295304.4:p.Arg174His
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8906C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8906C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11794C>T
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27337
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3837
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg174His
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

2-54001631-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001631
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001631
    reference: chr 2
allele count: 1
allele frequency: 8.861163293517173e-6
allele num: 112852
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8909A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.524T>C
  hgvsp: ENSP00000295304.4:p.Leu175Ser
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8909A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44924A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8909A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12327A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8909A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8909A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11791A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8909A>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7481
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22034
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3973
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu175Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

2-54001633-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001633
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001633
    reference: chr 2
allele count: 1
allele frequency: 8.879575201122378e-6
allele num: 112618
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8911C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8911C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12325C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8911C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.526G>A
  hgvsp: ENSP00000295304.4:p.Glu176Lys
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8911C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8911C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44926C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11789C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8911C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu176Lys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum

2-54001636-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001636
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001636
    reference: chr 2
allele count: 89
allele frequency: 7.927600520193113e-4
allele num: 112266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8914C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8914C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44929C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8914C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8914C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11786C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.529G>A
  hgvsp: ENSP00000295304.4:p.Gly177Arg
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12322C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8914C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8914C>T
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 21972
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12283
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5186
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7468
  bin: 2.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6569
  bin: 9.75e1
  variant carriers: 88
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1681
  bin: 9.25e1
  variant carriers: 1
hgvs: p.Gly177Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-54001645-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001645
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001645
    reference: chr 2
allele count: 1
allele frequency: 8.986663790934254e-6
allele num: 111276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12313T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.538A>C
  hgvsp: ENSP00000295304.4:p.Asn180His
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8923T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8923T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11777T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8923T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44938T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8923T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8923T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8923T>G
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5162
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2367
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2767
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asn180His
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD

2-54001648-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001648
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001648
    reference: chr 2
allele count: 3
allele frequency: 2.704018171002109e-5
allele num: 110946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8926G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.541C>T
  hgvsp: ENSP00000295304.4:p.Leu181Phe
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8926G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8926G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8926G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12310G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8926G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11774G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44941G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8926G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5158
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7918
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2915
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu181Phe
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum

2-54001649-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001649
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001649
    reference: chr 2
allele count: 1
allele frequency: 9.021037058420237e-6
allele num: 110852
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11773A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8927A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8927A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.542T>C
  hgvsp: ENSP00000295304.4:p.Leu181Pro
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44942A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8927A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12309A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8927A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8927A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8927A>G
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu181Pro
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

2-54001653-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001653
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001653
    reference: chr 2
allele count: 7
allele frequency: 6.350473563885764e-5
allele num: 110228
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.546T>C
  hgvsp: ENST00000295304.4:c.546T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8931A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44946A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11769A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8931A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8931A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8931A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8931A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8931A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12305A>G
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21669
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12017
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3012
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5112
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2581
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn182Asn
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

2-54001653-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001653
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001653
    reference: chr 2
allele count: 1
allele frequency: 9.072105091265377e-6
allele num: 110228
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8931A>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8931A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44946A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8931A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8931A>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11769A>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.546T>A
  hgvsp: ENSP00000295304.4:p.Asn182Lys
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8931A>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8931A>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12305A>T
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12017
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3012
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1202
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7798
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3046
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2780
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn182Lys
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

2-54001656-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001656
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001654
    reference: chr 2
allele count: 1
allele frequency: 9.082322168131948e-6
allele num: 110104
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8936_196-8935delAT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8936_-13-8935delAT
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8936_102-8935delAT
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8936_93-8935delAT
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.553_554delTA
  hgvsp: ENSP00000295304.4:p.Ter185Ile
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12300_-24+12301delAT
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44951_164-44950delAT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8936_126-8935delAT
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8936_30-8935delAT
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11764_-24+11765delAT
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ter185Ile
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: CAT
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

2-54001664-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001664
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001664
    reference: chr 2
allele count: 1
allele frequency: 9.124753631651945e-6
allele num: 109592
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8942A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11758A>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8942A>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8942A>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44957A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8942A>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.*2T>G
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12294A>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8942A>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8942A>C
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1671
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-54001666-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001666
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001666
    reference: chr 2
allele count: 9
allele frequency: 8.221580735922827e-5
allele num: 109468
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8944T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8944T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12292T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11756T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8944T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8944T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8944T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8944T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.*4A>C
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44959T>G
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3743
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5100
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11866
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7706
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3691
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2737
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/2-54001678-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001678
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001678
    reference: chr 2
allele count: 2
allele frequency: 1.833348611238427e-5
allele num: 109090
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12280T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44971T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8956T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8956T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11744T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8956T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8956T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.*16A>C
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8956T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8956T>G
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7267
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5052
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7521
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: A
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

2-54001683-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001683
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001683
    reference: chr 2
allele count: 1
allele frequency: 9.180207472688882e-6
allele num: 108930
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.*21C>G
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8961G>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8961G>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11739G>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12275G>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8961G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8961G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8961G>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8961G>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44976G>C
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2552
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11476
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7367
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

2-54001689-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001689
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001689
    reference: chr 2
allele count: 1
allele frequency: 9.191345429143918e-6
allele num: 108798
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8967A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11733A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8967A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12269A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8967A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44982A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8967A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8967A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.*27T>C
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8967A>G
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3816
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7242
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

2-54001691-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001691
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001691
    reference: chr 2
allele count: 3
allele frequency: 2.759889604415823e-5
allele num: 108700
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.*29C>T
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8969G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11731G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8969G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8969G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8969G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8969G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12267G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44984G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8969G>A
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11160
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1433
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2496
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

2-54001693-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001693
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001693
    reference: chr 2
allele count: 15
allele frequency: 1.380859446919763e-4
allele num: 108628
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8971G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8971G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8971G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12265G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11729G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8971G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8971G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8971G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.*31C>T
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44986G>A
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6184
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18642
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4968
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11014
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1625
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS

2-54001706-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001706
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001706
    reference: chr 2
allele count: 2
allele frequency: 1.852023335494027e-5
allele num: 107990
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8984T>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.*44A>G
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8984T>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8984T>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8984T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-44999T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8984T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11716T>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12252T>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8984T>C
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4833
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7943
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9166
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2990
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2010
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5786
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3619
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

2-54001711-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001711
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001711
    reference: chr 2
allele count: 10
allele frequency: 9.332885354836301e-5
allele num: 107148
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.*49G>A
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8989C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11711C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8989C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12247C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8989C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8989C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8989C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-45004C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8989C>T
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11267
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10731
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4762
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8333
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7903
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5185
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2493
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9892
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/2-54001712-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54001712
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54001712
    reference: chr 2
allele count: 3
allele frequency: 2.798664104334198e-5
allele num: 107194
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-8990T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-8990T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-45005T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-8990T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.126-8990T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000470916
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000470916.1:n.30-8990T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000143942
  ensembl protein: ENSP00000295304
  ensembl transcript: ENST00000295304
  gene symbol: CHAC2
  hgvsc: ENST00000295304.4:c.*50A>C
  variant of: http://identifiers.org/hgnc/32363
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000263634
  ensembl transcript: ENST00000263634
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000263634.3:c.-13-8990T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000378206
  ensembl transcript: ENST00000394717
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000394717.2:c.-24+12246T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000384728
  ensembl transcript: ENST00000406687
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000406687.1:c.-24+11710T>G
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4743
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3884
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11107
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6428
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2034
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

2-54014298-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014298
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014298
    reference: chr 2
allele count: 10
allele frequency: 1.130198915009042e-4
allele num: 88480
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.-50C>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21576G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57591G>C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.-50C>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+325G>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.-50C>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.118C>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21576G>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21576G>C
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19426
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7002
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13071
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12818
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6867
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3165
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3605
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7810
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

2-54014300-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014300
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014300
    reference: chr 2
allele count: 1
allele frequency: 1.129535083359689e-5
allele num: 88532
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.-48T>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.120T>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.-48T>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57593A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21578A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+323A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21578A>G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.-48T>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21578A>G
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12795
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11657
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6586
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1354
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4804
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10748
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3147
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

2-54014302-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014302
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014302
    reference: chr 2
allele count: 1
allele frequency: 1.123898579392196e-5
allele num: 88976
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21580C>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21580C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+321C>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21580C>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.-46G>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.-46G>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.-46G>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.122G>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57595C>G
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10554
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12769
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7714
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7704
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3084
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11180
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

2-54014303-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014303
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014303
    reference: chr 2
allele count: 13341
allele frequency: 1.489349825846209e-1
allele num: 89576
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.-45A>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.123A>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+320T>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.-45A>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21581T>C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.-45A>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57596T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21581T>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21581T>C
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 3.25e1
  variant carriers: 341
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 9952
  bin: 2.25e1
  variant carriers: 2146
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 2.75e1
  variant carriers: 817
genotype depth: GenotypeDepth
  all individuals: 11797
  bin: 7.5e0
  variant carriers: 1924
genotype depth: GenotypeDepth
  all individuals: 11363
  bin: 1.75e1
  variant carriers: 3901
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 2.5e0
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 182
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 18720
  bin: 1.25e1
  variant carriers: 4540
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 7.5e0
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 9.25e1
  variant carriers: 283
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 6.75e1
  variant carriers: 142
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 1.25e1
  variant carriers: 106
genotype quality: GenotypeQuality
  all individuals: 5489
  bin: 3.25e1
  variant carriers: 168
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 8.25e1
  variant carriers: 239
genotype quality: GenotypeQuality
  all individuals: 3735
  bin: 2.75e1
  variant carriers: 124
num of homozygotes: 990
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS

2-54014304-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014304
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014304
    reference: chr 2
allele count: 1
allele frequency: 1.085634879277401e-5
allele num: 92112
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.124G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.-44G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+319C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21582C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.-44G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21582C>T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.-44G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21582C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57597C>T
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18394
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11573
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4776
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2820
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6322
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8384
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

2-54014313-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014313
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014313
    reference: chr 2
allele count: 3
allele frequency: 3.499930001399972e-5
allele num: 85716
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.-35G>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57606C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.133G>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21591C>G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.-35G>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21591C>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21591C>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.-35G>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+310C>G
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15118
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6308
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6489
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12697
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1539
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13071
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum

2-54014317-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014317
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014317
    reference: chr 2
allele count: 1
allele frequency: 1.303746968788298e-5
allele num: 76702
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.-31T>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21595A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.137T>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57610A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21595A>G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.-31T>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.-31T>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21595A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+306A>G
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5050
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6729
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3420
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

2-54014317-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014317
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014318
    reference: chr 2
allele count: 2
allele frequency: 2.607493937576595e-5
allele num: 76702
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21596dupC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21596dupC
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.-29dupG
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57611dupC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.139dupG
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.-29dupG
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.-29dupG
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+305dupC
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21596dupC
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18785
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1996
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1857
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3778
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5050
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ

2-54014318-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014318
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014318
    reference: chr 2
allele count: 1
allele frequency: 1.272232258721152e-5
allele num: 78602
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21596C>A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.-30G>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.-30G>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.138G>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21596C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+305C>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57611C>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21596C>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.-30G>T
  variant of: http://identifiers.org/hgnc/25222
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10913
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13047
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1731
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15256
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7324
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3238
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

2-54014321-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014321
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014321
    reference: chr 2
allele count: 2
allele frequency: 2.366023896841358e-5
allele num: 84530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.-27G>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+302C>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.-27G>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.141G>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.-27G>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21599C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21599C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57614C>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21599C>A
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12567
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4812
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20485
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3545
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

2-54014323-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014323
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014323
    reference: chr 2
allele count: 65
allele frequency: 7.859543904621412e-4
allele num: 82702
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21601A>C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.-25T>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.-25T>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21601A>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.143T>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.-25T>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+300A>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57616A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21601A>C
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4472
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11991
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20268
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12757
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 4781
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 17149
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3230
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4322
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 5.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

2-54014326-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014326
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014326
    reference: chr 2
allele count: 1
allele frequency: 1.159420289855072e-5
allele num: 86250
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+297G>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.-22C>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.-22C>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57619G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21604G>C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.-22C>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.146C>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21604G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21604G>C
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3076
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11101
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4122
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3664
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3208
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19206
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1234
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

2-54014343-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014343
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014343
    reference: chr 2
allele count: 5
allele frequency: 4.92174426616793e-5
allele num: 101590
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.-5G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21621C>T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.-5G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.163G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+280C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.-5G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21621C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57636C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21621C>T
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9374
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5374
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29670
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9220
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2011
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1468
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 5
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-54014347-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014347
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014347
    reference: chr 2
allele count: 2
allele frequency: 1.904689345167803e-5
allele num: 105004
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.-1G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+276C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.167G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57640C>T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.-1G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21625C>T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.-1G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21625C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21625C>T
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7076
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6238
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31957
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP

2-54014359-A-AGGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014359
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014362
    reference: chr 2
allele count: 1
allele frequency: 9.052723059096176e-6
allele num: 110464
alternate allele: AGGC
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.20_22dupGCG
  hgvsp: ENSP00000385629.3:p.Gly7dup
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21640_102-21638dupGCC
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57655_164-57653dupGCC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21640_196-21638dupGCC
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.20_22dupGCG
  hgvsp: ENSP00000367485.5:p.Gly7dup
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.187_189dupGCG
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+261_125+263dupGCC
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21640_93-21638dupGCC
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.20_22dupGCG
  hgvsp: ENSP00000185150.4:p.Gly7dup
  variant of: http://identifiers.org/hgnc/25222
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 34464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4869
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5383
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34966
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly7dup
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

2-54014372-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014372
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014372
    reference: chr 2
allele count: 3
allele frequency: 2.591837439955766e-5
allele num: 115748
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.25C>T
  hgvsp: ENSP00000185150.4:p.Arg9Trp
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.25C>T
  hgvsp: ENSP00000385629.3:p.Arg9Trp
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.25C>T
  hgvsp: ENSP00000367485.5:p.Arg9Trp
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21650G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57665G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+251G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21650G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.192C>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21650G>A
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1882
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2807
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg9Trp
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

2-54014373-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014373
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014373
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 116172
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.193G>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.26G>C
  hgvsp: ENSP00000367485.5:p.Arg9Pro
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+250C>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21651C>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.26G>C
  hgvsp: ENSP00000185150.4:p.Arg9Pro
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57666C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.26G>C
  hgvsp: ENSP00000385629.3:p.Arg9Pro
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21651C>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21651C>G
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2630
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2609
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3006
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg9Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ

2-54014374-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014374
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014374
    reference: chr 2
allele count: 5
allele frequency: 4.297304730473048e-5
allele num: 116352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21652C>T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.27G>A
  hgvsp: ENST00000185150.4:c.27G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.194G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.27G>A
  hgvsp: ENST00000378239.5:c.27G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.27G>A
  hgvsp: ENST00000405123.3:c.27G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+249C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57667C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21652C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21652C>T
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38272
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg9Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum

2-54014376-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014376
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014376
    reference: chr 2
allele count: 6
allele frequency: 5.140947648016451e-5
allele num: 116710
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+247C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21654C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21654C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21654C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.29G>A
  hgvsp: ENSP00000385629.3:p.Ser10Asn
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.29G>A
  hgvsp: ENSP00000367485.5:p.Ser10Asn
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.196G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57669C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.29G>A
  hgvsp: ENSP00000185150.4:p.Ser10Asn
  variant of: http://identifiers.org/hgnc/25222
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13101
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37051
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7824
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser10Asn
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

2-54014378-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014378
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014378
    reference: chr 2
allele count: 5
allele frequency: 4.275550690928991e-5
allele num: 116944
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21656G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.31C>G
  hgvsp: ENSP00000367485.5:p.Leu11Val
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.198C>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.31C>G
  hgvsp: ENSP00000185150.4:p.Leu11Val
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57671G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21656G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21656G>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.31C>G
  hgvsp: ENSP00000385629.3:p.Leu11Val
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+245G>C
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu11Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

2-54014388-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014388
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014388
    reference: chr 2
allele count: 1
allele frequency: 8.459521191100584e-6
allele num: 118210
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.41G>T
  hgvsp: ENSP00000385629.3:p.Gly14Val
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21666C>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.41G>T
  hgvsp: ENSP00000185150.4:p.Gly14Val
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.208G>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57681C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21666C>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21666C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.41G>T
  hgvsp: ENSP00000367485.5:p.Gly14Val
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+235C>A
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38907
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2754
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly14Val
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

2-54014389-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014389
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014389
    reference: chr 2
allele count: 1
allele frequency: 8.448086508405846e-6
allele num: 118370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.42C>T
  hgvsp: ENST00000405123.3:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21667G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+234G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.42C>T
  hgvsp: ENST00000185150.4:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21667G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57682G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.42C>T
  hgvsp: ENST00000378239.5:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21667G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.209C>T
  variant of: http://identifiers.org/hgnc/25222
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2745
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly14Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

2-54014394-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014394
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014394
    reference: chr 2
allele count: 1
allele frequency: 8.388135820695209e-6
allele num: 119216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57687G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+229G>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.47C>G
  hgvsp: ENSP00000185150.4:p.Pro16Arg
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.214C>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.47C>G
  hgvsp: ENSP00000367485.5:p.Pro16Arg
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.47C>G
  hgvsp: ENSP00000385629.3:p.Pro16Arg
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21672G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21672G>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21672G>C
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2026
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro16Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

2-54014398-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014398
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014398
    reference: chr 2
allele count: 5
allele frequency: 4.179553623672992e-5
allele num: 119630
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+225C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21676C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57691C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21676C>T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.51G>A
  hgvsp: ENST00000185150.4:c.51G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.51G>A
  hgvsp: ENST00000378239.5:c.51G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.51G>A
  hgvsp: ENST00000405123.3:c.51G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.218G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21676C>T
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2803
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val17Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

2-54014407-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014407
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014407
    reference: chr 2
allele count: 4
allele frequency: 3.33438922325403e-5
allele num: 119962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+216G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57700G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21685G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.60C>T
  hgvsp: ENST00000405123.3:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.227C>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21685G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.60C>T
  hgvsp: ENST00000378239.5:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.60C>T
  hgvsp: ENST00000185150.4:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21685G>A
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39685
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val20Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

2-54014412-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014412
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014412
    reference: chr 2
allele count: 30
allele frequency: 2.4982512241431e-4
allele num: 120084
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+211C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.65G>A
  hgvsp: ENSP00000385629.3:p.Cys22Tyr
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21690C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21690C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21690C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.65G>A
  hgvsp: ENSP00000367485.5:p.Cys22Tyr
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57705C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.65G>A
  hgvsp: ENSP00000185150.4:p.Cys22Tyr
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.232G>A
  variant of: http://identifiers.org/hgnc/25222
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39732
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Cys22Tyr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/2-54014416-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014416
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014416
    reference: chr 2
allele count: 1
allele frequency: 8.319605983460623e-6
allele num: 120198
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21694G>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.69C>A
  hgvsp: ENST00000405123.3:c.69C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.236C>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+207G>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21694G>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.69C>A
  hgvsp: ENST00000378239.5:c.69C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.69C>A
  hgvsp: ENST00000185150.4:c.69C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21694G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57709G>T
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8226
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39863
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly23Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

2-54014426-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014426
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014426
    reference: chr 2
allele count: 1
allele frequency: 8.306889734345666e-6
allele num: 120382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.246G>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+197C>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21704C>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21704C>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.79G>T
  hgvsp: ENSP00000185150.4:p.Ala27Ser
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.79G>T
  hgvsp: ENSP00000367485.5:p.Ala27Ser
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57719C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.79G>T
  hgvsp: ENSP00000385629.3:p.Ala27Ser
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21704C>A
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39843
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala27Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

2-54014428-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014428
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014428
    reference: chr 2
allele count: 1
allele frequency: 8.304820117596252e-6
allele num: 120412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.81G>C
  hgvsp: ENST00000185150.4:c.81G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.81G>C
  hgvsp: ENST00000378239.5:c.81G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+195C>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.81G>C
  hgvsp: ENST00000405123.3:c.81G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.248G>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21706C>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21706C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57721C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21706C>G
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5473
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8231
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala27Ala
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

2-54014430-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014430
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014430
    reference: chr 2
allele count: 1
allele frequency: 8.304130474498016e-6
allele num: 120422
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57723G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+193G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21708G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.250C>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.83C>T
  hgvsp: ENSP00000385629.3:p.Ser28Phe
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.83C>T
  hgvsp: ENSP00000367485.5:p.Ser28Phe
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21708G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.83C>T
  hgvsp: ENSP00000185150.4:p.Ser28Phe
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21708G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37521
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2838
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39798
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser28Phe
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum

2-54014438-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014438
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014438
    reference: chr 2
allele count: 2
allele frequency: 1.659172736473594e-5
allele num: 120542
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.258G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21716C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+185C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.91G>A
  hgvsp: ENSP00000185150.4:p.Gly31Ser
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.91G>A
  hgvsp: ENSP00000367485.5:p.Gly31Ser
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21716C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21716C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.91G>A
  hgvsp: ENSP00000385629.3:p.Gly31Ser
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57731C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly31Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-54014443-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014443
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014443
    reference: chr 2
allele count: 1
allele frequency: 8.288437629506838e-6
allele num: 120650
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.96A>T
  hgvsp: ENST00000378239.5:c.96A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21721T>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21721T>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21721T>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.263A>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+180T>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.96A>T
  hgvsp: ENST00000185150.4:c.96A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.96A>T
  hgvsp: ENST00000405123.3:c.96A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57736T>A
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37610
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40292
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2856
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3251
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg32Arg
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-54014444-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014444
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014444
    reference: chr 2
allele count: 1
allele frequency: 8.288437629506838e-6
allele num: 120650
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.264G>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.97G>C
  hgvsp: ENSP00000367485.5:p.Ala33Pro
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21722C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57737C>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21722C>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+179C>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.97G>C
  hgvsp: ENSP00000185150.4:p.Ala33Pro
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21722C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.97G>C
  hgvsp: ENSP00000385629.3:p.Ala33Pro
  variant of: http://identifiers.org/hgnc/25222
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8283
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala33Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

2-54014448-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014448
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014448
    reference: chr 2
allele count: 1
allele frequency: 8.28349430923941e-6
allele num: 120722
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21726A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21726A>G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.101T>C
  hgvsp: ENSP00000185150.4:p.Leu34Pro
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.101T>C
  hgvsp: ENSP00000367485.5:p.Leu34Pro
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+175A>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57741A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.268T>C
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.101T>C
  hgvsp: ENSP00000385629.3:p.Leu34Pro
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21726A>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40399
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8295
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu34Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

2-54014448-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014448
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014448
    reference: chr 2
allele count: 1
allele frequency: 8.28349430923941e-6
allele num: 120722
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+175A>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57741A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21726A>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.101T>G
  hgvsp: ENSP00000185150.4:p.Leu34Arg
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.101T>G
  hgvsp: ENSP00000367485.5:p.Leu34Arg
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.101T>G
  hgvsp: ENSP00000385629.3:p.Leu34Arg
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.268T>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21726A>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21726A>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40399
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu34Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum

http://identifiers.org/exac.variant/2-54014450-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014450
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014450
    reference: chr 2
allele count: 2
allele frequency: 1.656397005234214e-5
allele num: 120744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.103C>A
  hgvsp: ENSP00000385629.3:p.Pro35Thr
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57743G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+173G>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21728G>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21728G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.270C>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.103C>A
  hgvsp: ENSP00000185150.4:p.Pro35Thr
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.103C>A
  hgvsp: ENSP00000367485.5:p.Pro35Thr
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21728G>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2853
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40405
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro35Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

2-54014450-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014450
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014450
    reference: chr 2
allele count: 1
allele frequency: 8.281985026171072e-6
allele num: 120744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21728G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.103C>T
  hgvsp: ENSP00000367485.5:p.Pro35Ser
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21728G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.270C>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.103C>T
  hgvsp: ENSP00000385629.3:p.Pro35Ser
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.103C>T
  hgvsp: ENSP00000185150.4:p.Pro35Ser
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+173G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21728G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57743G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2853
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8290
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40405
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro35Ser
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

2-54014459-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014459
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014459
    reference: chr 2
allele count: 1
allele frequency: 8.281847845891375e-6
allele num: 120746
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21737T>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.112A>T
  hgvsp: ENSP00000185150.4:p.Ser38Cys
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57752T>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.279A>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.112A>T
  hgvsp: ENSP00000367485.5:p.Ser38Cys
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+164T>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.112A>T
  hgvsp: ENSP00000385629.3:p.Ser38Cys
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21737T>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21737T>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8284
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser38Cys
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

2-54014467-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014467
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014467
    reference: chr 2
allele count: 1
allele frequency: 8.2936619835122e-6
allele num: 120574
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21745G>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.120C>T
  hgvsp: ENST00000185150.4:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.287C>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21745G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21745G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.120C>T
  hgvsp: ENST00000378239.5:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+156G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57760G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.120C>T
  hgvsp: ENST00000405123.3:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14533
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp40Asp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

2-54014469-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014469
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014469
    reference: chr 2
allele count: 2
allele frequency: 1.65873239670244e-5
allele num: 120574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+154A>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.122T>A
  hgvsp: ENSP00000185150.4:p.Ile41Asn
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21747A>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.122T>A
  hgvsp: ENSP00000367485.5:p.Ile41Asn
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.289T>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.122T>A
  hgvsp: ENSP00000385629.3:p.Ile41Asn
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21747A>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57762A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21747A>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40052
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2056
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2854
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile41Asn
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/2-54014483-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014483
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014483
    reference: chr 2
allele count: 2
allele frequency: 1.668362835549475e-5
allele num: 119878
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.136A>C
  hgvsp: ENSP00000367485.5:p.Asn46His
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+140T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21761T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21761T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57776T>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.136A>C
  hgvsp: ENSP00000385629.3:p.Asn46His
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21761T>G
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.136A>C
  hgvsp: ENSP00000185150.4:p.Asn46His
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.303A>C
  variant of: http://identifiers.org/hgnc/25222
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2054
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2840
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn46His
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS

2-54014490-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014490
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014490
    reference: chr 2
allele count: 1
allele frequency: 8.378718056137411e-6
allele num: 119350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.143C>T
  hgvsp: ENSP00000385629.3:p.Pro48Leu
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21768G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.310C>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.143C>T
  hgvsp: ENSP00000185150.4:p.Pro48Leu
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.143C>T
  hgvsp: ENSP00000367485.5:p.Pro48Leu
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21768G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+133G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57783G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21768G>A
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36097
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro48Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

2-54014492-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014492
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014492
    reference: chr 2
allele count: 1
allele frequency: 8.385322331790435e-6
allele num: 119256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+131C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.312G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.145G>A
  hgvsp: ENSP00000385629.3:p.Gly49Ser
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.145G>A
  hgvsp: ENSP00000185150.4:p.Gly49Ser
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.145G>A
  hgvsp: ENSP00000367485.5:p.Gly49Ser
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21770C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57785C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21770C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21770C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3230
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38056
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly49Ser
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ

2-54014500-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014500
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014500
    reference: chr 2
allele count: 6
allele frequency: 5.056890012642225e-5
allele num: 118650
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21778C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21778C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.320G>A
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.153G>A
  hgvsp: ENST00000378239.5:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.153G>A
  hgvsp: ENST00000185150.4:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+123C>T
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57793C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.153G>A
  hgvsp: ENST00000405123.3:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21778C>T
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3212
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu51Glu
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

2-54014505-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014505
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014505
    reference: chr 2
allele count: 1
allele frequency: 8.441953130276222e-6
allele num: 118456
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.158C>G
  hgvsp: ENSP00000185150.4:p.Ser53Cys
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.158C>G
  hgvsp: ENSP00000367485.5:p.Ser53Cys
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21783G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.158C>G
  hgvsp: ENSP00000385629.3:p.Ser53Cys
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21783G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.325C>G
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+118G>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21783G>C
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57798G>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7996
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3209
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser53Cys
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD

2-54014505-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014505
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014505
    reference: chr 2
allele count: 3
allele frequency: 2.532585939082866e-5
allele num: 118456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000068912
  ensembl transcript: ENST00000494373
  gene symbol: ERLEC1
  hgvsc: ENST00000494373.1:n.325C>T
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.158C>T
  hgvsp: ENSP00000385629.3:p.Ser53Phe
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21783G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21783G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl transcript: ENST00000414369
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000414369.2:n.125+118G>A
  variant of: http://identifiers.org/hgnc/40043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000367485
  ensembl transcript: ENST00000378239
  gene symbol: ERLEC1
  hgvsc: ENST00000378239.5:c.158C>T
  hgvsp: ENSP00000367485.5:p.Ser53Phe
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000498475
  gene symbol: ASB3
  hgvsc: ENST00000498475.2:n.164-57798G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000185150
  ensembl transcript: ENST00000185150
  gene symbol: ERLEC1
  hgvsc: ENST00000185150.4:c.158C>T
  hgvsp: ENSP00000185150.4:p.Ser53Phe
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl transcript: ENST00000459916
  gene symbol: ASB3
  hgvsc: ENST00000459916.1:n.196-21783G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2810
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2528
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser53Phe
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

2-54014506-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 54014506
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 54014506
    reference: chr 2
allele count: 1
allele frequency: 8.446516656530846e-6
allele num: 118392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000068912
  ensembl protein: ENSP00000385629
  ensembl transcript: ENST00000405123
  gene symbol: ERLEC1
  hgvsc: ENST00000405123.3:c.159T>G
  hgvsp: ENST00000405123.3:c.159T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25222
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000270898
  ensembl protein: ENSP00000385085
  ensembl transcript: ENST00000406625
  gene symbol: ASB3
  hgvsc: ENST00000406625.2:c.93-21784A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115239
  ensembl protein: ENSP00000313756
  ensembl transcript: ENST00000352846
  gene symbol: GPR75-ASB3
  hgvsc: ENST00000352846.3:c.102-21784A>C
  variant of: http://identifiers.org/hgnc/40043
canonical: true
consequence: synonymous
filter: PASS
hgvs: p.Ser53Ser
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4094
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3999
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27301
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8090
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.543019380323417e-5
allele num: 64808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 1.827012e6

FS
type: SiteQuality
SIO_000300: 1.367e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

QD
type: SiteQuality
SIO_000300: 1.346e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.525e0

GenotypeQuality
all individuals: 3985
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4047
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8062
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6553
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2839
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2791
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.181998021760633e-5
allele num: 64704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.822992e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.528e0

VQSLOD
type: SiteQuality
SIO_000300: 2.61e0

FS
type: SiteQuality
SIO_000300: 5.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.06e-1

QD
type: SiteQuality
SIO_000300: 1.129e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-2

MQ
type: SiteQuality
SIO_000300: 5.941e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.89e-1

GenotypeQuality
all individuals: 245
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1215
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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Other
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European (Finnish)
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MQRankSum
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VQSLOD
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ReadPosRankSum
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DP
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FS
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MQ
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BaseQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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Other
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South Asian
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ReadPosRankSum
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BaseQRankSum
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QD
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MQ
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FS
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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European (Non-Finnish)
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Other
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East Asian
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South Asian
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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FS
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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East Asian
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African
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
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MQ
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QD
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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Other
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African
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Latino
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South Asian
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European (Finnish)
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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MQRankSum
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FS
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QD
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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Other
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South Asian
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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QD
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FS
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MQ
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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South Asian
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Other
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East Asian
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European (Non-Finnish)
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ReadPosRankSum
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InbreedingCoeff
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QD
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MQ
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DP
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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FS
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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Other
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European (Finnish)
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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FS
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QD
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ReadPosRankSum
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MQ
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.044153720359771e-4
allele num: 9784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.866335231742236e-5
allele num: 63562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.36e-1

DP
type: SiteQuality
SIO_000300: 1.784199e6

FS
type: SiteQuality
SIO_000300: 1.186e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

QD
type: SiteQuality
SIO_000300: 1.888e1

GenotypeQuality
all individuals: 133
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.053518752633797e-4
allele num: 9492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63562
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.784199e6

QD
type: SiteQuality
SIO_000300: 1.888e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

FS
type: SiteQuality
SIO_000300: 1.186e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7778
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.574356875216474e-5
allele num: 63518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9428
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.608e0

MQRankSum
type: SiteQuality
SIO_000300: 1.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.43e-1

DP
type: SiteQuality
SIO_000300: 1.782169e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

QD
type: SiteQuality
SIO_000300: 1.67e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.578880889225717e-5
allele num: 63336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9710
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

DP
type: SiteQuality
SIO_000300: 1.770508e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e0

VQSLOD
type: SiteQuality
SIO_000300: -5.61e-2

QD
type: SiteQuality
SIO_000300: 1.789e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.469e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.422025596460736e-4
allele num: 63290
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.869e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

QD
type: SiteQuality
SIO_000300: 1.242e1

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-2

DP
type: SiteQuality
SIO_000300: 1.767285e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.584e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.95e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

GenotypeQuality
all individuals: 143
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63106
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9032
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.036484245439469e-4
allele num: 9648
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.745845723281441e-5
allele num: 11434
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.96e-1

DP
type: SiteQuality
SIO_000300: 1.746849e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

QD
type: SiteQuality
SIO_000300: 1.281e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9004
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.748906386701662e-5
allele num: 11430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63030
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.07e-1

QD
type: SiteQuality
SIO_000300: 1.691e1

MQ
type: SiteQuality
SIO_000300: 5.848e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.449e0

DP
type: SiteQuality
SIO_000300: 1.733654e6

FS
type: SiteQuality
SIO_000300: 1.639e0

VQSLOD
type: SiteQuality
SIO_000300: -1.584e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.181474480151229e-4
allele num: 8464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62956
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.28e-1

DP
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
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SIO_000300: -7.6e-1

MQ
type: SiteQuality
SIO_000300: 5.616e1

VQSLOD
type: SiteQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6449
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2602
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9550
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.339269813000891e-4
allele num: 8984
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.707114e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

QD
type: SiteQuality
SIO_000300: 1.013e1

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
type: SiteQuality
SIO_000300: -1.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

FS
type: SiteQuality
SIO_000300: 3.748e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.051e0

VQSLOD
type: SiteQuality
SIO_000300: 6.27e-1

GenotypeQuality
all individuals: 3774
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6991
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1640
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2586
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2547
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 15

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22708
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3575
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8980
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 1.57563025210084e-3
allele num: 9520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.178e1

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

DP
type: SiteQuality
SIO_000300: 1.698134e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.064e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 935
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6430
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2508
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8936
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62506
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.371916508538899e-4
allele num: 8432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.923e1

FS
type: SiteQuality
SIO_000300: 1.861e0

VQSLOD
type: SiteQuality
SIO_000300: -3.881e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

DP
type: SiteQuality
SIO_000300: 1.613556e6

MQRankSum
type: SiteQuality
SIO_000300: 1.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.57e-1

QD
type: SiteQuality
SIO_000300: 8.630000000000001e0

GenotypeQuality
all individuals: 2462
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3888
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3052
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2155
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3292
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3388
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6435
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1632
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8878
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 9.679500967950097e-4
allele num: 9298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.614987080103359e-5
allele num: 61920
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.92e0

DP
type: SiteQuality
SIO_000300: 1.594766e6

FS
type: SiteQuality
SIO_000300: 9.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.129999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.022e1

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.002e0

GenotypeQuality
all individuals: 1502
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4910
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3121
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2854
bin: 7.5e0
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GenotypeQuality
all individuals: 1662
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4853
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variant carriers: 0

GenotypeQuality
all individuals: 2476
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1635
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2460
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3928
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3320
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7489
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4881
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61950
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.372302158273381e-4
allele num: 8896
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.5e-2

DP
type: SiteQuality
SIO_000300: 1.590309e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e0

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

QD
type: SiteQuality
SIO_000300: 1.32e1

GenotypeQuality
all individuals: 2088
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3018
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4825
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9940
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 337
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4882
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 4998
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8666
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50736
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.612903225806452e-3
allele num: 620
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 9.17805425249847e-4
allele num: 9806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4734
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

QD
type: SiteQuality
SIO_000300: 1.224e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.1474e5

GenotypeQuality
all individuals: 2086
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4834
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2192
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2634
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1246
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2153
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7766
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 824
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6792
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.015640869388584e-4
allele num: 9846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50798
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.059e0

DP
type: SiteQuality
SIO_000300: 9.22243e5

VQSLOD
type: SiteQuality
SIO_000300: -1.198e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.47e-1

MQ
type: SiteQuality
SIO_000300: 5.883e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

QD
type: SiteQuality
SIO_000300: 1.342e1

GenotypeQuality
all individuals: 2160
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4828
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 5.75e1
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GenotypeQuality
all individuals: 998
bin: 7.75e1
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GenotypeQuality
all individuals: 2289
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 8.25e1
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GenotypeQuality
all individuals: 4454
bin: 4.75e1
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GenotypeQuality
all individuals: 1355
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6725
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2051
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8742
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.96232339089482e-5
allele num: 50960
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.261e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

QD
type: SiteQuality
SIO_000300: 1.169e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.22e-1

DP
type: SiteQuality
SIO_000300: 9.31884e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.22e-1

MQ
type: SiteQuality
SIO_000300: 5.723e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

GenotypeQuality
all individuals: 818
bin: 7.25e1
variant carriers: 160

GenotypeQuality
all individuals: 4809
bin: 3.75e1
variant carriers: 227

GenotypeQuality
all individuals: 443
bin: 8.75e1
variant carriers: 277

GenotypeQuality
all individuals: 11896
bin: 9.75e1
variant carriers: 11132

GenotypeQuality
all individuals: 3136
bin: 4.75e1
variant carriers: 253

GenotypeQuality
all individuals: 1492
bin: 5.25e1
variant carriers: 237

GenotypeQuality
all individuals: 1811
bin: 2.5e0
variant carriers: 38

GenotypeQuality
all individuals: 413
bin: 5.75e1
variant carriers: 158

GenotypeQuality
all individuals: 1358
bin: 1.75e1
variant carriers: 155

GenotypeQuality
all individuals: 2264
bin: 4.25e1
variant carriers: 162

GenotypeQuality
all individuals: 979
bin: 7.75e1
variant carriers: 228

GenotypeQuality
all individuals: 9142
bin: 2.25e1
variant carriers: 176

GenotypeQuality
all individuals: 6511
bin: 6.25e1
variant carriers: 160

East Asian
type: Population
allele count: 1388
allele frequency: 2.079089275014979e-1
allele num: 6676
num of homozygotes: 139

South Asian
type: Population
allele count: 1207
allele frequency: 1.195049504950495e-1
allele num: 10100
num of homozygotes: 69

European (Non-Finnish)
type: Population
allele count: 6053
allele frequency: 1.185839667737638e-1
allele num: 51044
num of homozygotes: 321

European (Finnish)
type: Population
allele count: 610
allele frequency: 1.306209850107066e-1
allele num: 4670
num of homozygotes: 31

Latino
type: Population
allele count: 1946
allele frequency: 2.199864345466878e-1
allele num: 8846
num of homozygotes: 167

Other
type: Population
allele count: 85
allele frequency: 1.311728395061728e-1
allele num: 648
num of homozygotes: 4

African
type: Population
allele count: 2052
allele frequency: 2.702845100105374e-1
allele num: 7592
num of homozygotes: 259

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.03e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

DP
type: SiteQuality
SIO_000300: 9.59578e5

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.87e0

QD
type: SiteQuality
SIO_000300: 1.652e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2307
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.916810427448725e-5
allele num: 52170
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9252
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.654e0

VQSLOD
type: SiteQuality
SIO_000300: -2.008e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

MQ
type: SiteQuality
SIO_000300: 5.833e1

DP
type: SiteQuality
SIO_000300: 9.6286e5

QD
type: SiteQuality
SIO_000300: 9.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.45e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 250
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 6.561966840194234e-5
allele num: 45718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7044
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4482
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.845e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.57e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.786e0

MQRankSum
type: SiteQuality
SIO_000300: -7.18e-1

DP
type: SiteQuality
SIO_000300: 1.039054e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.900000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.715e1

FS
type: SiteQuality
SIO_000300: 6.182e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6996
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7186
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.06224771616741e-4
allele num: 9414
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.67e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.7e-2

QD
type: SiteQuality
SIO_000300: 1.405e1

MQ
type: SiteQuality
SIO_000300: 5.996e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.9e-1

DP
type: SiteQuality
SIO_000300: 1.06276e6

MQRankSum
type: SiteQuality
SIO_000300: 6.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.31e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6996
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.277880403230063e-5
allele num: 37894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7186
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.67e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e0

DP
type: SiteQuality
SIO_000300: 1.06276e6

VQSLOD
type: SiteQuality
SIO_000300: 5.31e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.405e1

MQ
type: SiteQuality
SIO_000300: 5.996e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7042
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11006
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.365374112506827e-4
allele num: 7324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3888
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39274
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.214e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.48e0

QD
type: SiteQuality
SIO_000300: 1.039e1

MQ
type: SiteQuality
SIO_000300: 5.764e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.644e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.37e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

DP
type: SiteQuality
SIO_000300: 1.061856e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1103
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GenotypeQuality
all individuals: 517
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4062
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.534530449371967e-5
allele num: 44106
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.6638e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.33e-2

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.387e0

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.76e-1

DP
type: SiteQuality
SIO_000300: 1.067207e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 4.58e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 31

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 8.75e1
variant carriers: 2

European (Non-Finnish)
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allele count: 35
allele frequency: 8.149010477299185e-4
allele num: 42950
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7184
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9742
num of homozygotes: 0

Other
type: Population
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allele frequency: 1.689189189189189e-3
allele num: 592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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num of homozygotes: 0

African
type: Population
allele count: 28
allele frequency: 3.959276018099547e-3
allele num: 7072
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 2.626050420168067e-4
allele num: 3808
num of homozygotes: 0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.015954e6

MQ
type: SiteQuality
SIO_000300: 5.245e1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.1521e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.17e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.305e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.567e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.74e-1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7382
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.236235967619303e-5
allele num: 44718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9920
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4208
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-2

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.0681e1

MQRankSum
type: SiteQuality
SIO_000300: -1.071e0

MQ
type: SiteQuality
SIO_000300: 5.623e1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.103e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-2

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.205e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1978
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GenotypeQuality
all individuals: 648
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 9.087604507451835e-5
allele num: 55020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10734
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.227833e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

QD
type: SiteQuality
SIO_000300: 9.51e0

FS
type: SiteQuality
SIO_000300: 6.357e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.905e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

GenotypeQuality
all individuals: 1481
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10916
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8144
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5366
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14012
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.74831287807266e-5
allele num: 57198
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.593e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

FS
type: SiteQuality
SIO_000300: 1.2428e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

QD
type: SiteQuality
SIO_000300: 1.27e1

DP
type: SiteQuality
SIO_000300: 1.275057e6

GenotypeQuality
all individuals: 171
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 570
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6919
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GenotypeQuality
all individuals: 880
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9012
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11162
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.651473114017704e-5
allele num: 60552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5780
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.94e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 6.207e0

QD
type: SiteQuality
SIO_000300: 2.023e1

MQ
type: SiteQuality
SIO_000300: 5.69e1

DP
type: SiteQuality
SIO_000300: 1.354671e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.58e-1

GenotypeQuality
all individuals: 135
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7714
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 236
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variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15784
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.576342255430499e-5
allele num: 63438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.154574132492114e-4
allele num: 6340
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.427889e6

MQ
type: SiteQuality
SIO_000300: 5.905e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.56e-1

FS
type: SiteQuality
SIO_000300: 3.317e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.11e0

QD
type: SiteQuality
SIO_000300: 1.474e1

MQRankSum
type: SiteQuality
SIO_000300: 9.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
all individuals: 7761
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 102
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
all individuals: 100
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 762
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GenotypeQuality
all individuals: 1907
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variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9624
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.74e0

MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.1408e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.43e-1

DP
type: SiteQuality
SIO_000300: 1.432061e6

VQSLOD
type: SiteQuality
SIO_000300: -1.574e0

QD
type: SiteQuality
SIO_000300: 9.699999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 2516
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variant carriers: 0

GenotypeQuality
all individuals: 1386
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
all individuals: 2652
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GenotypeQuality
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GenotypeQuality
all individuals: 101
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 313
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GenotypeQuality
all individuals: 854
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variant carriers: 0

GenotypeQuality
all individuals: 1913
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variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.835762419683435e-5
allele num: 63810
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.56e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.398e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.88e0

VQSLOD
type: SiteQuality
SIO_000300: -7.915e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 1.1451e1

DP
type: SiteQuality
SIO_000300: 1.434439e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 114
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15918
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 6.199628022318661e-4
allele num: 9678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64022
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

FS
type: SiteQuality
SIO_000300: 4.882e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.85e-1

DP
type: SiteQuality
SIO_000300: 1.438618e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.25e-1

QD
type: SiteQuality
SIO_000300: 1.235e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 865
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.558749259594102e-5
allele num: 64154
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.224712107065049e-4
allele num: 6426
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.07e-1

FS
type: SiteQuality
SIO_000300: 2.959e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.933e1

VQSLOD
type: SiteQuality
SIO_000300: 6.879999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

QD
type: SiteQuality
SIO_000300: 1.5e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

DP
type: SiteQuality
SIO_000300: 1.442295e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 103
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GenotypeQuality
all individuals: 8004
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541449579184265e-5
allele num: 64874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

DP
type: SiteQuality
SIO_000300: 1.460409e6

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.1e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.87e1

QD
type: SiteQuality
SIO_000300: 1.041e1

MQRankSum
type: SiteQuality
SIO_000300: -1.814e0

VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.76731544800982e-5
allele num: 11406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64984
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.463344e6

FS
type: SiteQuality
SIO_000300: 3.924e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.288e0

VQSLOD
type: SiteQuality
SIO_000300: 1.81e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

MQRankSum
type: SiteQuality
SIO_000300: 4.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

QD
type: SiteQuality
SIO_000300: 1.051e1

GenotypeQuality
all individuals: 3183
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8108
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1440
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2777
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39574
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10012
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526670941345302e-5
allele num: 65502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.524e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 2.282e1

MQRankSum
type: SiteQuality
SIO_000300: -4.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.654e0

DP
type: SiteQuality
SIO_000300: 1.473049e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.65e0

VQSLOD
type: SiteQuality
SIO_000300: -5.487e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.24e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.98e-1

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39741
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.605025400784838e-5
allele num: 65746
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.15e-1

DP
type: SiteQuality
SIO_000300: 1.478567e6

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 2.152e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.836e0

VQSLOD
type: SiteQuality
SIO_000300: 9.429999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.272e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e-1

GenotypeQuality
all individuals: 120
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2050
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 909
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2825
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3231
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.954132068011072e-4
allele num: 10116
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.48e0

DP
type: SiteQuality
SIO_000300: 1.48278e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.707e0

QD
type: SiteQuality
SIO_000300: 1.305e1

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8218
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2830
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variant carriers: 0

GenotypeQuality
all individuals: 3243
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
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variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2054
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variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 9.75e1
variant carriers: 30

East Asian
type: Population
allele count: 28
allele frequency: 3.271792474877308e-3
allele num: 8558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65998
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.218323586744639e-4
allele num: 16416
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.955e1

DP
type: SiteQuality
SIO_000300: 1.486149e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 5.629999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.175e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.36e0

MQRankSum
type: SiteQuality
SIO_000300: -9.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.982e0

GenotypeQuality
all individuals: 1485
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 102
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 913
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variant carriers: 0

GenotypeQuality
all individuals: 105
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variant carriers: 0

GenotypeQuality
all individuals: 2835
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 2056
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.090875867949811e-5
allele num: 16418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

VQSLOD
type: SiteQuality
SIO_000300: 3.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.227e0

FS
type: SiteQuality
SIO_000300: 2.093e0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.006e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 1.486944e6

QD
type: SiteQuality
SIO_000300: 1.611e1

GenotypeQuality
all individuals: 2055
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
all individuals: 2834
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1487
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8224
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.084205402774397e-5
allele num: 16436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

QD
type: SiteQuality
SIO_000300: 1.305e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

FS
type: SiteQuality
SIO_000300: 3.248e0

DP
type: SiteQuality
SIO_000300: 1.489485e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: -1.011e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.911e0

MQRankSum
type: SiteQuality
SIO_000300: -2.192e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-2

GenotypeQuality
all individuals: 915
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 40
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.083465141744738e-5
allele num: 16438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

FS
type: SiteQuality
SIO_000300: 4.89e0

DP
type: SiteQuality
SIO_000300: 1.490104e6

QD
type: SiteQuality
SIO_000300: 1.191e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1487
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variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66184
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166044776119403e-4
allele num: 8576
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

DP
type: SiteQuality
SIO_000300: 1.490604e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.235e0

VQSLOD
type: SiteQuality
SIO_000300: -1.348e0

MQ
type: SiteQuality
SIO_000300: 5.895e1

FS
type: SiteQuality
SIO_000300: 7.471e0

QD
type: SiteQuality
SIO_000300: 1.131e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.36e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.018047926601074e-5
allele num: 66268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: 9.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

DP
type: SiteQuality
SIO_000300: 1.492056e6

QD
type: SiteQuality
SIO_000300: 1.234e1

FS
type: SiteQuality
SIO_000300: 1.2031e1

VQSLOD
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SIO_000300: -1.394e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.31e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66332
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.088650754992694e-5
allele num: 16424
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.59e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.08e-1

FS
type: SiteQuality
SIO_000300: 2.098e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.32e-1

DP
type: SiteQuality
SIO_000300: 1.49397e6

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.502e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.12e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507567991316408e-5
allele num: 66332
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.899e1

MQRankSum
type: SiteQuality
SIO_000300: 2.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.913e-1

DP
type: SiteQuality
SIO_000300: 1.494361e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.921e0

FS
type: SiteQuality
SIO_000300: 1.273e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.47e-1

QD
type: SiteQuality
SIO_000300: 1.187e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66374
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 1.151e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-2

DP
type: SiteQuality
SIO_000300: 1.495459e6

MQ
type: SiteQuality
SIO_000300: 5.983e1

FS
type: SiteQuality
SIO_000300: 1.701e0

MQRankSum
type: SiteQuality
SIO_000300: -5.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.09e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66374
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.091617933723197e-5
allele num: 16416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 1.701e0

QD
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.983e1

MQRankSum
type: SiteQuality
SIO_000300: -5.05e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.012501882813677e-5
allele num: 66390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66390
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.718172983479106e-5
allele num: 10290
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
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allele num: 906
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East Asian
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.505525277769414e-5
allele num: 66422
num of homozygotes: 0

QD
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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ReadPosRankSum
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MQ
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VQSLOD
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ClippingRankSum
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: 7.34e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506341698550899e-5
allele num: 66386
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.4928e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

VQSLOD
type: SiteQuality
SIO_000300: -1.156e-1

FS
type: SiteQuality
SIO_000300: 5.293e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.356e0

QD
type: SiteQuality
SIO_000300: 1.152e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.171e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.231375446373599e-4
allele num: 16242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.168e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.86e-1

DP
type: SiteQuality
SIO_000300: 1.492476e6

FS
type: SiteQuality
SIO_000300: 7.33e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.458e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.324500232450023e-4
allele num: 8604
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.479644e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

QD
type: SiteQuality
SIO_000300: 1.121e1

VQSLOD
type: SiteQuality
SIO_000300: 2.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.07e0

FS
type: SiteQuality
SIO_000300: 4.64e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2052
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3233
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66066
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162520344106022e-4
allele num: 8602
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.4702e6

MQ
type: SiteQuality
SIO_000300: 5.901e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.143e0

QD
type: SiteQuality
SIO_000300: 4.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.767e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.252e0

GenotypeQuality
all individuals: 8090
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513912859175826e-5
allele num: 66054
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15350
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.26e-1

DP
type: SiteQuality
SIO_000300: 1.468141e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.004e0

FS
type: SiteQuality
SIO_000300: 1.368e0

MQRankSum
type: SiteQuality
SIO_000300: 2.35e-1

QD
type: SiteQuality
SIO_000300: 1.03e1

MQ
type: SiteQuality
SIO_000300: 5.938e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14960
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele count: 6
allele frequency: 5.202913631633715e-4
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

DP
type: SiteQuality
SIO_000300: 1.455311e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.744e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.124e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.938e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.730380939561179e-5
allele num: 14858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65830
num of homozygotes: 0

InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.937e1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.68e-1

BaseQRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

DP
type: SiteQuality
SIO_000300: 1.451074e6

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.557192769254139e-5
allele num: 65830
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.457e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.451074e6

BaseQRankSum
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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