http://identifiers.org/exac.variant/1-26691158-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691158
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691158
    reference: chr 1
allele count: 4
allele frequency: 3.29614186594591e-5
allele num: 121354
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.879T>G
  hgvsp: ENST00000436292.1:c.879T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.879T>G
  hgvsp: ENST00000349618.3:c.879T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.879T>G
  hgvsp: ENST00000374204.1:c.879T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.879T>G
  hgvsp: ENST00000403843.1:c.879T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11354
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8869
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31998
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4746
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17958
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1595
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser293Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

1-26691164-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691164
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691164
    reference: chr 1
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.873G>C
  hgvsp: ENSP00000363320.1:p.Met291Ile
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.873G>C
  hgvsp: ENSP00000344095.3:p.Met291Ile
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.873G>C
  hgvsp: ENSP00000388792.1:p.Met291Ile
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.873G>C
  hgvsp: ENSP00000384782.1:p.Met291Ile
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8870
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7877
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17862
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genotype quality: GenotypeQuality
  all individuals: 1595
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genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31999
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Met291Ile
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-26691169-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691169
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691169
    reference: chr 1
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.868G>T
  hgvsp: ENSP00000384782.1:p.Gly290Cys
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.868G>T
  hgvsp: ENSP00000344095.3:p.Gly290Cys
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.868G>T
  hgvsp: ENSP00000363320.1:p.Gly290Cys
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.868G>T
  hgvsp: ENSP00000388792.1:p.Gly290Cys
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 32000
  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 750
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly290Cys
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-26691171-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691171
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691171
    reference: chr 1
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.866G>C
  hgvsp: ENSP00000388792.1:p.Gly289Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.866G>C
  hgvsp: ENSP00000344095.3:p.Gly289Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.866G>C
  hgvsp: ENSP00000384782.1:p.Gly289Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.866G>C
  hgvsp: ENSP00000363320.1:p.Gly289Ala
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1134
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32000
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1796
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly289Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/1-26691174-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691174
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691174
    reference: chr 1
allele count: 39424
allele frequency: 3.25092768203183e-1
allele num: 121270
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.863G>T
  hgvsp: ENSP00000388792.1:p.Arg288Leu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.863G>T
  hgvsp: ENSP00000384782.1:p.Arg288Leu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.863G>T
  hgvsp: ENSP00000363320.1:p.Arg288Leu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.863G>T
  hgvsp: ENSP00000344095.3:p.Arg288Leu
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 8.75e1
  variant carriers: 1878
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 5.25e1
  variant carriers: 365
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 4.75e1
  variant carriers: 280
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.25e1
  variant carriers: 1076
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 3.75e1
  variant carriers: 244
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 10413
  bin: 2.75e1
  variant carriers: 148
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5775
  bin: 2.25e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 21378
  bin: 9.75e1
  variant carriers: 21146
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 9.25e1
  variant carriers: 2088
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 8.25e1
  variant carriers: 1676
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 7.75e1
  variant carriers: 1372
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 3.25e1
  variant carriers: 175
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 6.25e1
  variant carriers: 585
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 6.75e1
  variant carriers: 758
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 5.75e1
  variant carriers: 458
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 4.25e1
  variant carriers: 249
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 115
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4073
  bin: 6.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1387
  bin: 7.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 8.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 8.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 1
hgvs: p.Arg288Leu
num of homozygotes: 6804
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD

1-26691174-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691174
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691174
    reference: chr 1
allele count: 4
allele frequency: 3.298425002061515e-5
allele num: 121270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.863G>A
  hgvsp: ENSP00000344095.3:p.Arg288His
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.863G>A
  hgvsp: ENSP00000384782.1:p.Arg288His
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.863G>A
  hgvsp: ENSP00000388792.1:p.Arg288His
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.863G>A
  hgvsp: ENSP00000363320.1:p.Arg288His
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21378
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15677
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 7
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genotype quality: GenotypeQuality
  all individuals: 4073
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genotype quality: GenotypeQuality
  all individuals: 115
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genotype quality: GenotypeQuality
  all individuals: 8
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genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 23
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genotype quality: GenotypeQuality
  all individuals: 438
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genotype quality: GenotypeQuality
  all individuals: 25
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 4
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36107
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg288His
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum

1-26691175-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691175
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691175
    reference: chr 1
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.862C>T
  hgvsp: ENSP00000363320.1:p.Arg288Cys
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.862C>T
  hgvsp: ENSP00000388792.1:p.Arg288Cys
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.862C>T
  hgvsp: ENSP00000384782.1:p.Arg288Cys
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.862C>T
  hgvsp: ENSP00000344095.3:p.Arg288Cys
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 171
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1644
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 35715
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 964
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genotype quality: GenotypeQuality
  all individuals: 2950
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg288Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

1-26691181-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691181
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691181
    reference: chr 1
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.856C>T
  hgvsp: ENST00000349618.3:c.856C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.856C>T
  hgvsp: ENST00000436292.1:c.856C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.856C>T
  hgvsp: ENST00000374204.1:c.856C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.856C>T
  hgvsp: ENST00000403843.1:c.856C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10785
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 324
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2863
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35602
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu286Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

1-26691194-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691194
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691194
    reference: chr 1
allele count: 5
allele frequency: 4.128682785044259e-5
allele num: 121104
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.843C>T
  hgvsp: ENST00000374204.1:c.843C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.843C>T
  hgvsp: ENST00000436292.1:c.843C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.843C>T
  hgvsp: ENST00000403843.1:c.843C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.843C>T
  hgvsp: ENST00000349618.3:c.843C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11219
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5955
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2925
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35422
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2850
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr281Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD

1-26691194-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691194
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691194
    reference: chr 1
allele count: 2
allele frequency: 1.651473114017704e-5
allele num: 121104
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.843C>A
  hgvsp: ENST00000374204.1:c.843C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.843C>A
  hgvsp: ENST00000403843.1:c.843C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.843C>A
  hgvsp: ENST00000436292.1:c.843C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.843C>A
  hgvsp: ENST00000349618.3:c.843C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2925
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35422
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9284
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2850
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr281Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

1-26691197-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691197
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691198
    reference: chr 1
allele count: 1
allele frequency: 8.260093834665961e-6
allele num: 121064
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.839dupC
  hgvsp: ENSP00000344095.3:p.Thr281AsnfsTer112
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.839dupC
  hgvsp: ENSP00000363320.1:p.Thr281AsnfsTer112
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.839dupC
  hgvsp: ENSP00000388792.1:p.Thr281AsnfsTer132
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.839dupC
  hgvsp: ENSP00000384782.1:p.Thr281AsnfsTer132
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2845
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35452
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2930
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5950
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1624
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr281AsnfsTer112
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

1-26691198-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691198
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691198
    reference: chr 1
allele count: 1
allele frequency: 8.259684480052863e-6
allele num: 121070
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.839C>G
  hgvsp: ENSP00000384782.1:p.Pro280Arg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.839C>G
  hgvsp: ENSP00000344095.3:p.Pro280Arg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.839C>G
  hgvsp: ENSP00000363320.1:p.Pro280Arg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.839C>G
  hgvsp: ENSP00000388792.1:p.Pro280Arg
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2844
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35462
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5949
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Pro280Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-26691199-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691199
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691199
    reference: chr 1
allele count: 1
allele frequency: 8.260503229856763e-6
allele num: 121058
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.838C>G
  hgvsp: ENSP00000344095.3:p.Pro280Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.838C>G
  hgvsp: ENSP00000363320.1:p.Pro280Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.838C>G
  hgvsp: ENSP00000384782.1:p.Pro280Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.838C>G
  hgvsp: ENSP00000388792.1:p.Pro280Ala
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11239
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5945
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2844
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35384
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2925
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9277
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1623
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro280Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

1-26691203-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691203
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691202
    reference: chr 1
allele count: 1
allele frequency: 8.262414277451872e-6
allele num: 121030
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.833delC
  hgvsp: ENSP00000344095.3:p.Ala278ValfsTer23
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.833delC
  hgvsp: ENSP00000384782.1:p.Ala278ValfsTer23
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.833delC
  hgvsp: ENSP00000363320.1:p.Ala278ValfsTer23
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.833delC
  hgvsp: ENSP00000388792.1:p.Ala278ValfsTer23
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35348
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9239
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2923
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala278ValfsTer23
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: AG
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

1-26691205-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691205
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691205
    reference: chr 1
allele count: 3
allele frequency: 2.479707725116133e-5
allele num: 120982
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.832G>A
  hgvsp: ENSP00000363320.1:p.Ala278Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.832G>A
  hgvsp: ENSP00000344095.3:p.Ala278Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.832G>A
  hgvsp: ENSP00000384782.1:p.Ala278Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.832G>A
  hgvsp: ENSP00000388792.1:p.Ala278Thr
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5936
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
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genotype quality: GenotypeQuality
  all individuals: 58
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9212
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1618
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 106
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala278Thr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

1-26691207-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691207
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691207
    reference: chr 1
allele count: 7
allele frequency: 5.785506479767257e-5
allele num: 120992
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.830G>A
  hgvsp: ENSP00000363320.1:p.Gly277Glu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.830G>A
  hgvsp: ENSP00000384782.1:p.Gly277Glu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.830G>A
  hgvsp: ENSP00000344095.3:p.Gly277Glu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.830G>A
  hgvsp: ENSP00000388792.1:p.Gly277Glu
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9217
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1618
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2914
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2834
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly277Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/1-26691211-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691211
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691211
    reference: chr 1
allele count: 1
allele frequency: 8.26541913940456e-6
allele num: 120986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.826G>T
  hgvsp: ENSP00000344095.3:p.Ala276Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.826G>T
  hgvsp: ENSP00000363320.1:p.Ala276Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.826G>T
  hgvsp: ENSP00000388792.1:p.Ala276Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.826G>T
  hgvsp: ENSP00000384782.1:p.Ala276Ser
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9201
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35167
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5918
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala276Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD

1-26691211-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691211
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691211
    reference: chr 1
allele count: 4
allele frequency: 3.306167655761824e-5
allele num: 120986
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.826G>C
  hgvsp: ENSP00000344095.3:p.Ala276Pro
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.826G>C
  hgvsp: ENSP00000388792.1:p.Ala276Pro
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.826G>C
  hgvsp: ENSP00000363320.1:p.Ala276Pro
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.826G>C
  hgvsp: ENSP00000384782.1:p.Ala276Pro
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1617
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5918
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35167
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9201
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2825
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala276Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-26691223-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691223
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691223
    reference: chr 1
allele count: 1
allele frequency: 8.272803984182399e-6
allele num: 120878
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.814C>T
  hgvsp: ENSP00000344095.3:p.Arg272Ter
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.814C>T
  hgvsp: ENSP00000388792.1:p.Arg272Ter
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.814C>T
  hgvsp: ENSP00000363320.1:p.Arg272Ter
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.814C>T
  hgvsp: ENSP00000384782.1:p.Arg272Ter
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.838C>T
  hgvsp: ENSP00000411289.1:p.Arg280Ter
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1599
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5904
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2793
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9155
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2900
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg272Ter
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

1-26691223-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691223
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691223
    reference: chr 1
allele count: 1
allele frequency: 8.272803984182399e-6
allele num: 120878
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.814C>G
  hgvsp: ENSP00000344095.3:p.Arg272Gly
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.838C>G
  hgvsp: ENSP00000411289.1:p.Arg280Gly
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.814C>G
  hgvsp: ENSP00000384782.1:p.Arg272Gly
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.814C>G
  hgvsp: ENSP00000388792.1:p.Arg272Gly
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.814C>G
  hgvsp: ENSP00000363320.1:p.Arg272Gly
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9155
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1599
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35153
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg272Gly
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

1-26691223-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691223
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691223
    reference: chr 1
allele count: 1
allele frequency: 8.272803984182399e-6
allele num: 120878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.814C>A
  hgvsp: ENST00000349618.3:c.814C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.814C>A
  hgvsp: ENST00000436292.1:c.814C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.814C>A
  hgvsp: ENST00000374204.1:c.814C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.838C>A
  hgvsp: ENST00000455900.1:c.838C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.814C>A
  hgvsp: ENST00000403843.1:c.814C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24830
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5904
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9155
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2793
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg272Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum

1-26691243-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691243
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691242
    reference: chr 1
allele count: 1
allele frequency: 8.32251406504877e-6
allele num: 120156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.793delC
  hgvsp: ENSP00000411290.1:p.Gln265LysfsTer?
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.793delC
  hgvsp: ENSP00000363320.1:p.Gln265LysfsTer36
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.793delC
  hgvsp: ENSP00000388792.1:p.Gln265LysfsTer36
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.793delC
  hgvsp: ENSP00000384782.1:p.Gln265LysfsTer36
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.817delC
  hgvsp: ENSP00000411289.1:p.Gln273LysfsTer?
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.793delC
  hgvsp: ENSP00000344095.3:p.Gln265LysfsTer36
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24309
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2830
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln265LysfsTer36
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: TG
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

1-26691245-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691245
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691245
    reference: chr 1
allele count: 2
allele frequency: 1.666055779547499e-5
allele num: 120044
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.816C>A
  hgvsp: ENST00000455900.1:c.816C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.792C>A
  hgvsp: ENST00000451801.1:c.792C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.792C>A
  hgvsp: ENST00000436292.1:c.792C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.792C>A
  hgvsp: ENST00000349618.3:c.792C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.792C>A
  hgvsp: ENST00000403843.1:c.792C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.792C>A
  hgvsp: ENST00000374204.1:c.792C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24216
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1557
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8852
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly264Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

1-26691252-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691252
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691252
    reference: chr 1
allele count: 1
allele frequency: 8.369321415419637e-6
allele num: 119484
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.785C>T
  hgvsp: ENSP00000344095.3:p.Ala262Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.785C>T
  hgvsp: ENSP00000411290.1:p.Ala262Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.809C>T
  hgvsp: ENSP00000411289.1:p.Ala270Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.785C>T
  hgvsp: ENSP00000384782.1:p.Ala262Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.785C>T
  hgvsp: ENSP00000388792.1:p.Ala262Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.785C>T
  hgvsp: ENSP00000363320.1:p.Ala262Val
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8582
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2240
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2669
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33229
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala262Val
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-26691261-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691261
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691261
    reference: chr 1
allele count: 299
allele frequency: 2.51925248133731e-3
allele num: 118686
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.776C>T
  hgvsp: ENSP00000363320.1:p.Ala259Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.776C>T
  hgvsp: ENSP00000344095.3:p.Ala259Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.776C>T
  hgvsp: ENSP00000411290.1:p.Ala259Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.776C>T
  hgvsp: ENSP00000384782.1:p.Ala259Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.800C>T
  hgvsp: ENSP00000411289.1:p.Ala267Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.776C>T
  hgvsp: ENSP00000388792.1:p.Ala259Val
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 5.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 4.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 23663
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 4.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 6.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 9661
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 6.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 7.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 10838
  bin: 2.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 1
hgvs: p.Ala259Val
num of homozygotes: 3
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/1-26691264-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691264
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691264
    reference: chr 1
allele count: 1
allele frequency: 8.444234276835777e-6
allele num: 118424
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.773G>T
  hgvsp: ENSP00000363320.1:p.Gly258Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.773G>T
  hgvsp: ENSP00000344095.3:p.Gly258Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.773G>T
  hgvsp: ENSP00000411290.1:p.Gly258Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.773G>T
  hgvsp: ENSP00000384782.1:p.Gly258Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.797G>T
  hgvsp: ENSP00000411289.1:p.Gly266Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.773G>T
  hgvsp: ENSP00000388792.1:p.Gly258Val
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8561
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2736
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly258Val
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum

1-26691268-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691268
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691268
    reference: chr 1
allele count: 5
allele frequency: 4.236211132762857e-5
allele num: 118030
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.769C>T
  hgvsp: ENSP00000384782.1:p.Pro257Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.769C>T
  hgvsp: ENSP00000344095.3:p.Pro257Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.769C>T
  hgvsp: ENSP00000363320.1:p.Pro257Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.769C>T
  hgvsp: ENSP00000411290.1:p.Pro257Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.769C>T
  hgvsp: ENSP00000388792.1:p.Pro257Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.793C>T
  hgvsp: ENSP00000411289.1:p.Pro265Ser
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2642
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32505
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8550
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1521
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3561
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro257Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

1-26691268-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691268
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691268
    reference: chr 1
allele count: 1
allele frequency: 8.472422265525714e-6
allele num: 118030
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.769C>G
  hgvsp: ENSP00000411290.1:p.Pro257Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.793C>G
  hgvsp: ENSP00000411289.1:p.Pro265Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.769C>G
  hgvsp: ENSP00000388792.1:p.Pro257Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.769C>G
  hgvsp: ENSP00000363320.1:p.Pro257Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.769C>G
  hgvsp: ENSP00000384782.1:p.Pro257Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.769C>G
  hgvsp: ENSP00000344095.3:p.Pro257Ala
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2740
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8550
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro257Ala
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP

1-26691269-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691269
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691269
    reference: chr 1
allele count: 2
allele frequency: 1.696525515743757e-5
allele num: 117888
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.768C>T
  hgvsp: ENST00000436292.1:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.768C>T
  hgvsp: ENST00000403843.1:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.768C>T
  hgvsp: ENST00000374204.1:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.768C>T
  hgvsp: ENST00000451801.1:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.768C>T
  hgvsp: ENST00000349618.3:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.792C>T
  hgvsp: ENST00000455900.1:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2637
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3668
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr256Tyr
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP

1-26691285-TCCCACCGAGCG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691285
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691274
    reference: chr 1
allele count: 1
allele frequency: 8.850967410737994e-6
allele num: 112982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsp: ENSP00000388792.1:p.Ser247ArgfsTer162
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsp: ENSP00000411290.1:p.Ser247ArgfsTer?
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsp: ENSP00000411289.1:p.Ser255ArgfsTer?
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsp: ENSP00000344095.3:p.Ser247ArgfsTer142
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsp: ENSP00000363320.1:p.Ser247ArgfsTer142
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsp: ENSP00000384782.1:p.Ser247ArgfsTer162
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23039
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2575
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8087
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31226
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5192
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser247ArgfsTer142
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: TCCCACCGAGCG
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

1-26691286-CCCACCGAGCGCTGGGGTGCCCCAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691286
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691262
    reference: chr 1
allele count: 11800
allele frequency: 1.017469432803904e-1
allele num: 115974
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsp: ENSP00000411289.1:p.Leu251_Trp258del
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsp: ENSP00000384782.1:p.Leu243_Trp250del
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsp: ENSP00000363320.1:p.Leu243_Trp250del
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsp: ENSP00000411290.1:p.Leu243_Trp250del
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsp: ENSP00000344095.3:p.Leu243_Trp250del
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsp: ENSP00000388792.1:p.Leu243_Trp250del
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9953
  bin: 2.25e1
  variant carriers: 198
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 8.25e1
  variant carriers: 708
genotype depth: GenotypeDepth
  all individuals: 9005
  bin: 3.25e1
  variant carriers: 180
genotype depth: GenotypeDepth
  all individuals: 22682
  bin: 2.75e1
  variant carriers: 146
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.25e1
  variant carriers: 491
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.25e1
  variant carriers: 766
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 1.25e1
  variant carriers: 328
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 7.75e1
  variant carriers: 749
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 1.75e1
  variant carriers: 342
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 6.75e1
  variant carriers: 721
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 3.75e1
  variant carriers: 234
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 4.25e1
  variant carriers: 325
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 9.25e1
  variant carriers: 576
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 7.5e0
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.75e1
  variant carriers: 593
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 6.25e1
  variant carriers: 650
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 4.75e1
  variant carriers: 439
genotype depth: GenotypeDepth
  all individuals: 3001
  bin: 9.75e1
  variant carriers: 2984
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 8.75e1
  variant carriers: 648
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3122
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 8.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 1.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 9.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1904
  bin: 7.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7543
  bin: 6.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 8
hgvs: p.Leu243_Trp250del
num of homozygotes: 738
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: CCCACCGAGCGCTGGGGTGCCCCAG
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/1-26691288-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691288
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691288
    reference: chr 1
allele count: 2
allele frequency: 2.07546386617409e-5
allele num: 96364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.773G>T
  hgvsp: ENSP00000411289.1:p.Trp258Leu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.749G>T
  hgvsp: ENSP00000363320.1:p.Trp250Leu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.749G>T
  hgvsp: ENSP00000388792.1:p.Trp250Leu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.749G>T
  hgvsp: ENSP00000344095.3:p.Trp250Leu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.749G>T
  hgvsp: ENSP00000411290.1:p.Trp250Leu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.749G>T
  hgvsp: ENSP00000384782.1:p.Trp250Leu
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3146
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2057
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Trp250Leu
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

1-26691291-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691291
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691291
    reference: chr 1
allele count: 2
allele frequency: 2.106149957877001e-5
allele num: 94960
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.746G>A
  hgvsp: ENSP00000388792.1:p.Arg249Gln
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.746G>A
  hgvsp: ENSP00000344095.3:p.Arg249Gln
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.746G>A
  hgvsp: ENSP00000411290.1:p.Arg249Gln
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.746G>A
  hgvsp: ENSP00000363320.1:p.Arg249Gln
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.770G>A
  hgvsp: ENSP00000411289.1:p.Arg257Gln
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.746G>A
  hgvsp: ENSP00000384782.1:p.Arg249Gln
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2208
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30407
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7524
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg249Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-26691292-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691292
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691292
    reference: chr 1
allele count: 8
allele frequency: 8.532241206458907e-5
allele num: 93762
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.745C>T
  hgvsp: ENSP00000344095.3:p.Arg249Trp
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.745C>T
  hgvsp: ENSP00000388792.1:p.Arg249Trp
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.745C>T
  hgvsp: ENSP00000384782.1:p.Arg249Trp
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.745C>T
  hgvsp: ENSP00000363320.1:p.Arg249Trp
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.769C>T
  hgvsp: ENSP00000411289.1:p.Arg257Trp
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.745C>T
  hgvsp: ENSP00000411290.1:p.Arg249Trp
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30425
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg249Trp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP

1-26691295-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691295
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691295
    reference: chr 1
allele count: 2
allele frequency: 2.072410005595507e-5
allele num: 96506
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.742G>A
  hgvsp: ENSP00000344095.3:p.Ala248Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.766G>A
  hgvsp: ENSP00000411289.1:p.Ala256Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.742G>A
  hgvsp: ENSP00000388792.1:p.Ala248Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.742G>A
  hgvsp: ENSP00000411290.1:p.Ala248Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.742G>A
  hgvsp: ENSP00000363320.1:p.Ala248Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.742G>A
  hgvsp: ENSP00000384782.1:p.Ala248Thr
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2957
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30450
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1927
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2424
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ala248Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ

1-26691296-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691296
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691296
    reference: chr 1
allele count: 2
allele frequency: 2.138077013534027e-5
allele num: 93542
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.765C>T
  hgvsp: ENST00000455900.1:c.765C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.741C>T
  hgvsp: ENST00000374204.1:c.741C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.741C>T
  hgvsp: ENST00000349618.3:c.741C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.741C>T
  hgvsp: ENST00000403843.1:c.741C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.741C>T
  hgvsp: ENST00000451801.1:c.741C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.741C>T
  hgvsp: ENST00000436292.1:c.741C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8838
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1904
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2972
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30534
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser247Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

1-26691298-TGGGGTGCCCCAGC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691298
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691285
    reference: chr 1
allele count: 1
allele frequency: 1.031714916534263e-5
allele num: 96926
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsp: ENSP00000411289.1:p.Leu251AlafsTer?
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsp: ENSP00000384782.1:p.Leu243AlafsTer54
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsp: ENSP00000388792.1:p.Leu243AlafsTer54
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsp: ENSP00000363320.1:p.Leu243AlafsTer54
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsp: ENSP00000411290.1:p.Leu243AlafsTer?
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsp: ENSP00000344095.3:p.Leu243AlafsTer54
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9794
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7562
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3062
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu243AlafsTer54
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: TGGGGTGCCCCAGC
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum

1-26691301-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691301
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691301
    reference: chr 1
allele count: 1
allele frequency: 1.039241769205188e-5
allele num: 96224
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.736C>T
  hgvsp: ENSP00000384782.1:p.Pro246Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.736C>T
  hgvsp: ENSP00000411290.1:p.Pro246Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.736C>T
  hgvsp: ENSP00000363320.1:p.Pro246Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.760C>T
  hgvsp: ENSP00000411289.1:p.Pro254Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.736C>T
  hgvsp: ENSP00000344095.3:p.Pro246Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.736C>T
  hgvsp: ENSP00000388792.1:p.Pro246Ser
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22606
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
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genotype depth: GenotypeDepth
  all individuals: 102
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genotype depth: GenotypeDepth
  all individuals: 8869
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2952
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
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genotype quality: GenotypeQuality
  all individuals: 2229
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 381
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 844
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genotype quality: GenotypeQuality
  all individuals: 43
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro246Ser
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

1-26691305-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691305
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691305
    reference: chr 1
allele count: 1
allele frequency: 1.056859015007398e-5
allele num: 94620
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.732G>A
  hgvsp: ENST00000451801.1:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.732G>A
  hgvsp: ENST00000436292.1:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.732G>A
  hgvsp: ENST00000403843.1:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.732G>A
  hgvsp: ENST00000374204.1:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.756G>A
  hgvsp: ENST00000455900.1:c.756G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.732G>A
  hgvsp: ENST00000349618.3:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1914
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2224
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7558
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30596
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly244Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-26691307-CCAGCTCATTGACCATCAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691307
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691289
    reference: chr 1
allele count: 1
allele frequency: 1.053674161802204e-5
allele num: 94906
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsp: ENSP00000363320.1:p.Met238_Leu243del
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsp: ENSP00000411290.1:p.Met238_Leu243del
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsp: ENSP00000411289.1:p.Met246_Leu251del
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsp: ENSP00000388792.1:p.Met238_Leu243del
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsp: ENSP00000344095.3:p.Met238_Leu243del
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsp: ENSP00000384782.1:p.Met238_Leu243del
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8849
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2740
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7555
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2222
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Met238_Leu243del
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: CCAGCTCATTGACCATCAT
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-26691308-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691308
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691308
    reference: chr 1
allele count: 161
allele frequency: 1.724507283633248e-3
allele num: 93360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.729G>T
  hgvsp: ENST00000451801.1:c.729G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.729G>T
  hgvsp: ENST00000436292.1:c.729G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.729G>T
  hgvsp: ENST00000349618.3:c.729G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.753G>T
  hgvsp: ENST00000455900.1:c.753G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.729G>T
  hgvsp: ENST00000374204.1:c.729G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.729G>T
  hgvsp: ENST00000403843.1:c.729G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8835
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 9779
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 22611
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2214
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 9.75e1
  variant carriers: 158
genotype quality: GenotypeQuality
  all individuals: 1901
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2666
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7553
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu243Leu
num of homozygotes: 2
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

1-26691310-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691310
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691310
    reference: chr 1
allele count: 1
allele frequency: 1.080567081604426e-5
allele num: 92544
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.727C>T
  hgvsp: ENST00000403843.1:c.727C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.751C>T
  hgvsp: ENST00000455900.1:c.751C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.727C>T
  hgvsp: ENST00000436292.1:c.727C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.727C>T
  hgvsp: ENST00000349618.3:c.727C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.727C>T
  hgvsp: ENST00000451801.1:c.727C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.727C>T
  hgvsp: ENST00000374204.1:c.727C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7574
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1151
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2219
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30677
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu243Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum

1-26691313-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691313
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691313
    reference: chr 1
allele count: 1
allele frequency: 8.99814638184534e-6
allele num: 111134
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.724G>A
  hgvsp: ENSP00000388792.1:p.Glu242Lys
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.748G>A
  hgvsp: ENSP00000411289.1:p.Glu250Lys
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.724G>A
  hgvsp: ENSP00000363320.1:p.Glu242Lys
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.724G>A
  hgvsp: ENSP00000411290.1:p.Glu242Lys
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.724G>A
  hgvsp: ENSP00000344095.3:p.Glu242Lys
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.724G>A
  hgvsp: ENSP00000384782.1:p.Glu242Lys
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9133
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36465
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2912
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2707
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu242Lys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

1-26691321-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691321
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691321
    reference: chr 1
allele count: 1
allele frequency: 8.920606601248886e-6
allele num: 112100
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.716T>C
  hgvsp: ENSP00000363320.1:p.Met239Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.740T>C
  hgvsp: ENSP00000411289.1:p.Met247Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.716T>C
  hgvsp: ENSP00000384782.1:p.Met239Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.716T>C
  hgvsp: ENSP00000411290.1:p.Met239Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.716T>C
  hgvsp: ENSP00000388792.1:p.Met239Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.716T>C
  hgvsp: ENSP00000344095.3:p.Met239Thr
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27691
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2809
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37353
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2336
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1758
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9307
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Met239Thr
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

1-26691322-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691322
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691322
    reference: chr 1
allele count: 1
allele frequency: 8.926021136818052e-6
allele num: 112032
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.715A>G
  hgvsp: ENSP00000384782.1:p.Met239Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.739A>G
  hgvsp: ENSP00000411289.1:p.Met247Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.715A>G
  hgvsp: ENSP00000344095.3:p.Met239Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.715A>G
  hgvsp: ENSP00000411290.1:p.Met239Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.715A>G
  hgvsp: ENSP00000363320.1:p.Met239Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.715A>G
  hgvsp: ENSP00000388792.1:p.Met239Val
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1815
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9304
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37342
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2746
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met239Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

1-26691337-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691337
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691337
    reference: chr 1
allele count: 2
allele frequency: 1.797429675563943e-5
allele num: 111270
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.724C>T
  hgvsp: ENSP00000411289.1:p.Pro242Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.700C>T
  hgvsp: ENSP00000411290.1:p.Pro234Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.700C>T
  hgvsp: ENSP00000388792.1:p.Pro234Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.700C>T
  hgvsp: ENSP00000344095.3:p.Pro234Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.700C>T
  hgvsp: ENSP00000363320.1:p.Pro234Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.700C>T
  hgvsp: ENSP00000384782.1:p.Pro234Ser
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2409
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro234Ser
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD

1-26691340-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691340
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691340
    reference: chr 1
allele count: 2
allele frequency: 1.798431767498741e-5
allele num: 111208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.721A>G
  hgvsp: ENSP00000411289.1:p.Met241Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.697A>G
  hgvsp: ENSP00000344095.3:p.Met233Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.697A>G
  hgvsp: ENSP00000363320.1:p.Met233Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.697A>G
  hgvsp: ENSP00000411290.1:p.Met233Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.697A>G
  hgvsp: ENSP00000384782.1:p.Met233Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.697A>G
  hgvsp: ENSP00000388792.1:p.Met233Val
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2745
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9351
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2037
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met233Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

1-26691346-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691346
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691346
    reference: chr 1
allele count: 3
allele frequency: 2.701826434669837e-5
allele num: 111036
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.715A>G
  hgvsp: ENSP00000411289.1:p.Met239Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.691A>G
  hgvsp: ENSP00000344095.3:p.Met231Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.691A>G
  hgvsp: ENSP00000363320.1:p.Met231Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.691A>G
  hgvsp: ENSP00000388792.1:p.Met231Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.691A>G
  hgvsp: ENSP00000411290.1:p.Met231Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.691A>G
  hgvsp: ENSP00000384782.1:p.Met231Val
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2738
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1822
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2308
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9355
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2740
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Met231Val
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

1-26691347-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691347
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691347
    reference: chr 1
allele count: 148
allele frequency: 1.333261265156838e-3
allele num: 111006
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.690C>T
  hgvsp: ENST00000403843.1:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.690C>T
  hgvsp: ENST00000436292.1:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.690C>T
  hgvsp: ENST00000349618.3:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.690C>T
  hgvsp: ENST00000451801.1:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.714C>T
  hgvsp: ENST00000455900.1:c.714C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.690C>T
  hgvsp: ENST00000374204.1:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27869
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 10946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 11859
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2717
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2305
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9348
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1712
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2737
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr230Thr
num of homozygotes: 1
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

1-26691347-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691347
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691347
    reference: chr 1
allele count: 1
allele frequency: 9.008522061870529e-6
allele num: 111006
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.690C>A
  hgvsp: ENST00000374204.1:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.690C>A
  hgvsp: ENST00000436292.1:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.690C>A
  hgvsp: ENST00000451801.1:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.690C>A
  hgvsp: ENST00000403843.1:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.714C>A
  hgvsp: ENST00000455900.1:c.714C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.690C>A
  hgvsp: ENST00000349618.3:c.690C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2717
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2305
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2737
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37556
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr230Thr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum

1-26691354-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691354
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691354
    reference: chr 1
allele count: 1
allele frequency: 9.018271017080606e-6
allele num: 110886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.683A>T
  hgvsp: ENSP00000384782.1:p.Tyr228Phe
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.683A>T
  hgvsp: ENSP00000388792.1:p.Tyr228Phe
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.683A>T
  hgvsp: ENSP00000411290.1:p.Tyr228Phe
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.683A>T
  hgvsp: ENSP00000344095.3:p.Tyr228Phe
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.707A>T
  hgvsp: ENSP00000411289.1:p.Tyr236Phe
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.683A>T
  hgvsp: ENSP00000363320.1:p.Tyr228Phe
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27952
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2747
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2877
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37683
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1524
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Tyr228Phe
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

1-26691359-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691359
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691359
    reference: chr 1
allele count: 10
allele frequency: 9.023641941887746e-5
allele num: 110820
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.678C>T
  hgvsp: ENST00000436292.1:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.702C>T
  hgvsp: ENST00000455900.1:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.678C>T
  hgvsp: ENST00000403843.1:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.678C>T
  hgvsp: ENST00000451801.1:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.678C>T
  hgvsp: ENST00000349618.3:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.678C>T
  hgvsp: ENST00000374204.1:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2308
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9366
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2748
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 37699
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro226Pro
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

1-26691369-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691369
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691369
    reference: chr 1
allele count: 2
allele frequency: 1.806782662113574e-5
allele num: 110694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.692C>T
  hgvsp: ENSP00000411289.1:p.Pro231Leu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.668C>T
  hgvsp: ENSP00000388792.1:p.Pro223Leu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.668C>T
  hgvsp: ENSP00000384782.1:p.Pro223Leu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.668C>T
  hgvsp: ENSP00000363320.1:p.Pro223Leu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.668C>T
  hgvsp: ENSP00000411290.1:p.Pro223Leu
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.668C>T
  hgvsp: ENSP00000344095.3:p.Pro223Leu
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37703
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3093
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2738
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro223Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

1-26691382-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691382
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691382
    reference: chr 1
allele count: 1
allele frequency: 9.04224537037037e-6
allele num: 110592
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.655C>A
  hgvsp: ENSP00000411290.1:p.Leu219Ile
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.655C>A
  hgvsp: ENSP00000344095.3:p.Leu219Ile
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.655C>A
  hgvsp: ENSP00000384782.1:p.Leu219Ile
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.679C>A
  hgvsp: ENSP00000411289.1:p.Leu227Ile
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.655C>A
  hgvsp: ENSP00000388792.1:p.Leu219Ile
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.655C>A
  hgvsp: ENSP00000363320.1:p.Leu219Ile
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3209
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37770
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9323
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu219Ile
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

1-26691403-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691403
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691403
    reference: chr 1
allele count: 1
allele frequency: 9.045189768081334e-6
allele num: 110556
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.634C>T
  hgvsp: ENSP00000411290.1:p.Pro212Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.634C>T
  hgvsp: ENSP00000363320.1:p.Pro212Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.658C>T
  hgvsp: ENSP00000411289.1:p.Pro220Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.634C>T
  hgvsp: ENSP00000344095.3:p.Pro212Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.634C>T
  hgvsp: ENSP00000388792.1:p.Pro212Ser
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.634C>T
  hgvsp: ENSP00000384782.1:p.Pro212Ser
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10859
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37833
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1222
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2268
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro212Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

1-26691408-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691408
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691408
    reference: chr 1
allele count: 1
allele frequency: 9.045517041754106e-6
allele num: 110552
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.629C>T
  hgvsp: ENSP00000363320.1:p.Ala210Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.653C>T
  hgvsp: ENSP00000411289.1:p.Ala218Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.629C>T
  hgvsp: ENSP00000388792.1:p.Ala210Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.629C>T
  hgvsp: ENSP00000411290.1:p.Ala210Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.629C>T
  hgvsp: ENSP00000384782.1:p.Ala210Val
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.629C>T
  hgvsp: ENSP00000344095.3:p.Ala210Val
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10838
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9272
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2698
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala210Val
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

1-26691413-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691413
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691413
    reference: chr 1
allele count: 1
allele frequency: 9.045517041754106e-6
allele num: 110552
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.624T>C
  hgvsp: ENST00000436292.1:c.624T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.648T>C
  hgvsp: ENST00000455900.1:c.648T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.624T>C
  hgvsp: ENST00000374204.1:c.624T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.624T>C
  hgvsp: ENST00000403843.1:c.624T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.624T>C
  hgvsp: ENST00000451801.1:c.624T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.624T>C
  hgvsp: ENST00000349618.3:c.624T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12192
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2992
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9254
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr208Tyr
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

1-26691417-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691417
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691417
    reference: chr 1
allele count: 1
allele frequency: 9.045680687471733e-6
allele num: 110550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.620C>T
  hgvsp: ENSP00000384782.1:p.Thr207Ile
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.620C>T
  hgvsp: ENSP00000411290.1:p.Thr207Ile
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.620C>T
  hgvsp: ENSP00000388792.1:p.Thr207Ile
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.620C>T
  hgvsp: ENSP00000344095.3:p.Thr207Ile
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.644C>T
  hgvsp: ENSP00000411289.1:p.Thr215Ile
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.620C>T
  hgvsp: ENSP00000363320.1:p.Thr207Ile
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27920
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9243
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2960
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr207Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD

1-26691426-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691426
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691426
    reference: chr 1
allele count: 2
allele frequency: 1.809267065911599e-5
allele num: 110542
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.611A>C
  hgvsp: ENSP00000411290.1:p.His204Pro
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.635A>C
  hgvsp: ENSP00000411289.1:p.His212Pro
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.611A>C
  hgvsp: ENSP00000384782.1:p.His204Pro
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.611A>C
  hgvsp: ENSP00000344095.3:p.His204Pro
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.461A>C
  hgvsp: ENSP00000412881.1:p.His154Pro
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.611A>C
  hgvsp: ENSP00000388792.1:p.His204Pro
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.611A>C
  hgvsp: ENSP00000363320.1:p.His204Pro
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10754
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27899
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2212
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9200
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37868
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His204Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-26691428-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691428
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691428
    reference: chr 1
allele count: 4
allele frequency: 3.617617798679569e-5
allele num: 110570
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.609C>A
  hgvsp: ENST00000374204.1:c.609C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.609C>A
  hgvsp: ENST00000436292.1:c.609C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.459C>A
  hgvsp: ENST00000454975.1:c.459C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.609C>A
  hgvsp: ENST00000349618.3:c.609C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.609C>A
  hgvsp: ENST00000451801.1:c.609C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.609C>A
  hgvsp: ENST00000403843.1:c.609C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.633C>A
  hgvsp: ENST00000455900.1:c.633C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12249
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27883
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro203Pro
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

1-26691445-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691445
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691445
    reference: chr 1
allele count: 16
allele frequency: 1.448252140697695e-4
allele num: 110478
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.592C>T
  hgvsp: ENSP00000363320.1:p.Leu198Phe
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.592C>T
  hgvsp: ENSP00000344095.3:p.Leu198Phe
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.592C>T
  hgvsp: ENSP00000384782.1:p.Leu198Phe
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.442C>T
  hgvsp: ENSP00000412881.1:p.Leu148Phe
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.592C>T
  hgvsp: ENSP00000388792.1:p.Leu198Phe
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.592C>T
  hgvsp: ENSP00000411290.1:p.Leu198Phe
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.616C>T
  hgvsp: ENSP00000411289.1:p.Leu206Phe
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 27759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10480
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12394
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9030
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2547
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu198Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

1-26691448-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691448
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691448
    reference: chr 1
allele count: 1
allele frequency: 9.062567969259769e-6
allele num: 110344
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.589C>G
  hgvsp: ENSP00000384782.1:p.Pro197Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.589C>G
  hgvsp: ENSP00000344095.3:p.Pro197Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.589C>G
  hgvsp: ENSP00000363320.1:p.Pro197Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.439C>G
  hgvsp: ENSP00000412881.1:p.Pro147Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.589C>G
  hgvsp: ENSP00000388792.1:p.Pro197Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.589C>G
  hgvsp: ENSP00000411290.1:p.Pro197Ala
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.613C>G
  hgvsp: ENSP00000411289.1:p.Pro205Ala
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2061
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2882
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2502
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro197Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

1-26691448-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691448
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691448
    reference: chr 1
allele count: 1
allele frequency: 9.062567969259769e-6
allele num: 110344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.613C>A
  hgvsp: ENSP00000411289.1:p.Pro205Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.589C>A
  hgvsp: ENSP00000411290.1:p.Pro197Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.589C>A
  hgvsp: ENSP00000388792.1:p.Pro197Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.589C>A
  hgvsp: ENSP00000363320.1:p.Pro197Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.439C>A
  hgvsp: ENSP00000412881.1:p.Pro147Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.589C>A
  hgvsp: ENSP00000344095.3:p.Pro197Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.589C>A
  hgvsp: ENSP00000384782.1:p.Pro197Thr
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2502
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2061
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2882
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro197Thr
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-26691449-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691449
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691449
    reference: chr 1
allele count: 1
allele frequency: 9.059940566789881e-6
allele num: 110376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.612C>T
  hgvsp: ENST00000455900.1:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.588C>T
  hgvsp: ENST00000436292.1:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.588C>T
  hgvsp: ENST00000349618.3:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.588C>T
  hgvsp: ENST00000374204.1:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.438C>T
  hgvsp: ENST00000454975.1:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.588C>T
  hgvsp: ENST00000451801.1:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.588C>T
  hgvsp: ENST00000403843.1:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10369
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12485
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2495
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37522
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2106
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Tyr196Tyr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff

1-26691452-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691452
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691452
    reference: chr 1
allele count: 1
allele frequency: 9.065196896076583e-6
allele num: 110312
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.585A>G
  hgvsp: ENST00000451801.1:c.585A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.585A>G
  hgvsp: ENST00000349618.3:c.585A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.585A>G
  hgvsp: ENST00000436292.1:c.585A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.585A>G
  hgvsp: ENST00000403843.1:c.585A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.585A>G
  hgvsp: ENST00000374204.1:c.585A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.609A>G
  hgvsp: ENST00000455900.1:c.609A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.435A>G
  hgvsp: ENST00000454975.1:c.435A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27632
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12544
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8816
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3186
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly195Gly
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

1-26691452-T-TCTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691452
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691455
    reference: chr 1
allele count: 1
allele frequency: 9.065196896076583e-6
allele num: 110312
alternate allele: TCTG
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.608_609insCAG
  hgvsp: ENSP00000411289.1:p.Gly203_Tyr204insArg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.584_585insCAG
  hgvsp: ENSP00000384782.1:p.Gly195_Tyr196insArg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.434_435insCAG
  hgvsp: ENSP00000412881.1:p.Gly145_Tyr146insArg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.584_585insCAG
  hgvsp: ENSP00000411290.1:p.Gly195_Tyr196insArg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.584_585insCAG
  hgvsp: ENSP00000388792.1:p.Gly195_Tyr196insArg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.584_585insCAG
  hgvsp: ENSP00000363320.1:p.Gly195_Tyr196insArg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.584_585insCAG
  hgvsp: ENSP00000344095.3:p.Gly195_Tyr196insArg
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12544
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10286
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37695
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3186
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly195_Tyr196insArg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-26691454-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691454
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691454
    reference: chr 1
allele count: 1
allele frequency: 9.068814161860195e-6
allele num: 110268
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.583G>A
  hgvsp: ENSP00000363320.1:p.Gly195Arg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.583G>A
  hgvsp: ENSP00000411290.1:p.Gly195Arg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.607G>A
  hgvsp: ENSP00000411289.1:p.Gly203Arg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.583G>A
  hgvsp: ENSP00000344095.3:p.Gly195Arg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.583G>A
  hgvsp: ENSP00000388792.1:p.Gly195Arg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.433G>A
  hgvsp: ENSP00000412881.1:p.Gly145Arg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.583G>A
  hgvsp: ENSP00000384782.1:p.Gly195Arg
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2424
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1927
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly195Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

1-26691460-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691460
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691460
    reference: chr 1
allele count: 1
allele frequency: 9.088100041805261e-6
allele num: 110034
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.577T>C
  hgvsp: ENSP00000411290.1:p.Tyr193His
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.601T>C
  hgvsp: ENSP00000411289.1:p.Tyr201His
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.577T>C
  hgvsp: ENSP00000384782.1:p.Tyr193His
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.577T>C
  hgvsp: ENSP00000388792.1:p.Tyr193His
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.427T>C
  hgvsp: ENSP00000412881.1:p.Tyr143His
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.577T>C
  hgvsp: ENSP00000363320.1:p.Tyr193His
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.577T>C
  hgvsp: ENSP00000344095.3:p.Tyr193His
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2361
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Tyr193His
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-26691464-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691464
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691464
    reference: chr 1
allele count: 2
allele frequency: 1.820797144990077e-5
allele num: 109842
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.423C>T
  hgvsp: ENST00000454975.1:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.573C>T
  hgvsp: ENST00000451801.1:c.573C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.573C>T
  hgvsp: ENST00000349618.3:c.573C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.597C>T
  hgvsp: ENST00000455900.1:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.573C>T
  hgvsp: ENST00000436292.1:c.573C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.573C>T
  hgvsp: ENST00000403843.1:c.573C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.573C>T
  hgvsp: ENST00000374204.1:c.573C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26976
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36826
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala191Ala
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

1-26691466-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691466
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691466
    reference: chr 1
allele count: 336
allele frequency: 3.06787677361626e-3
allele num: 109522
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.571G>A
  hgvsp: ENSP00000411290.1:p.Ala191Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.571G>A
  hgvsp: ENSP00000384782.1:p.Ala191Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.571G>A
  hgvsp: ENSP00000363320.1:p.Ala191Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.571G>A
  hgvsp: ENSP00000344095.3:p.Ala191Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.571G>A
  hgvsp: ENSP00000388792.1:p.Ala191Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.595G>A
  hgvsp: ENSP00000411289.1:p.Ala199Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000406734
  ensembl transcript: ENST00000453132
  gene symbol: ZNF683
  hgvsc: ENST00000453132.1:c.366G>A
  hgvsp: ENST00000453132.1:c.366G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.421G>A
  hgvsp: ENSP00000412881.1:p.Ala141Thr
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 26779
  bin: 2.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 3.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 12721
  bin: 2.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9702
  bin: 3.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 4.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36380
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala191Thr
num of homozygotes: 5
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

1-26691467-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691467
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691467
    reference: chr 1
allele count: 2
allele frequency: 1.824517871152548e-5
allele num: 109618
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.570C>T
  hgvsp: ENST00000436292.1:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.420C>T
  hgvsp: ENST00000454975.1:c.420C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.570C>T
  hgvsp: ENST00000403843.1:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.570C>T
  hgvsp: ENST00000451801.1:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.594C>T
  hgvsp: ENST00000455900.1:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.570C>T
  hgvsp: ENST00000349618.3:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000406734
  ensembl transcript: ENST00000453132
  gene symbol: ZNF683
  hgvsc: ENST00000453132.1:c.365C>T
  hgvsp: ENSP00000406734.1:p.Thr122Met
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.570C>T
  hgvsp: ENST00000374204.1:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26753
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4765
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr122Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD

1-26691479-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691479
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691479
    reference: chr 1
allele count: 1
allele frequency: 9.266294779369521e-6
allele num: 107918
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.558A>G
  hgvsp: ENST00000451801.1:c.558A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.558A>G
  hgvsp: ENST00000436292.1:c.558A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000391584
  ensembl transcript: ENST00000423508
  gene symbol: ZNF683
  hgvsc: ENST00000423508.1:c.582A>G
  hgvsp: ENST00000423508.1:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.558A>G
  hgvsp: ENST00000403843.1:c.558A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.558A>G
  hgvsp: ENST00000349618.3:c.558A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.408A>G
  hgvsp: ENST00000454975.1:c.408A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000406734
  ensembl transcript: ENST00000453132
  gene symbol: ZNF683
  hgvsc: ENST00000453132.1:c.353A>G
  hgvsp: ENSP00000406734.1:p.His118Arg
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.582A>G
  hgvsp: ENST00000455900.1:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000401961
  ensembl transcript: ENST00000416125
  gene symbol: ZNF683
  hgvsc: ENST00000416125.1:c.558A>G
  hgvsp: ENST00000416125.1:c.558A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.558A>G
  hgvsp: ENST00000374204.1:c.558A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28495
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His118Arg
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-26691485-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26691485
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26691485
    reference: chr 1
allele count: 295
allele frequency: 2.762793137034539e-3
allele num: 106776
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000388792
  ensembl transcript: ENST00000436292
  gene symbol: ZNF683
  hgvsc: ENST00000436292.1:c.552G>C
  hgvsp: ENSP00000388792.1:p.Glu184Asp
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411289
  ensembl transcript: ENST00000455900
  gene symbol: ZNF683
  hgvsc: ENST00000455900.1:c.576G>C
  hgvsp: ENSP00000411289.1:p.Glu192Asp
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000344095
  ensembl transcript: ENST00000349618
  gene symbol: ZNF683
  hgvsc: ENST00000349618.3:c.552G>C
  hgvsp: ENSP00000344095.3:p.Glu184Asp
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000384782
  ensembl transcript: ENST00000403843
  gene symbol: ZNF683
  hgvsc: ENST00000403843.1:c.552G>C
  hgvsp: ENSP00000384782.1:p.Glu184Asp
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000363320
  ensembl transcript: ENST00000374204
  gene symbol: ZNF683
  hgvsc: ENST00000374204.1:c.552G>C
  hgvsp: ENSP00000363320.1:p.Glu184Asp
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000406734
  ensembl transcript: ENST00000453132
  gene symbol: ZNF683
  hgvsc: ENST00000453132.1:c.347G>C
  hgvsp: ENSP00000406734.1:p.Ser116Thr
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000412881
  ensembl transcript: ENST00000454975
  gene symbol: ZNF683
  hgvsc: ENST00000454975.1:c.402G>C
  hgvsp: ENSP00000412881.1:p.Glu134Asp
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000391584
  ensembl transcript: ENST00000423508
  gene symbol: ZNF683
  hgvsc: ENST00000423508.1:c.576G>C
  hgvsp: ENSP00000391584.1:p.Glu192Asp
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000411290
  ensembl transcript: ENST00000451801
  gene symbol: ZNF683
  hgvsc: ENST00000451801.1:c.552G>C
  hgvsp: ENSP00000411290.1:p.Glu184Asp
  variant of: http://identifiers.org/hgnc/28495
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176083
  ensembl protein: ENSP00000401961
  ensembl transcript: ENST00000416125
  gene symbol: ZNF683
  hgvsc: ENST00000416125.1:c.552G>C
  hgvsp: ENSP00000401961.1:p.Glu184Asp
  variant of: http://identifiers.org/hgnc/28495
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 13550
  bin: 2.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 23901
  bin: 2.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 3.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 5832
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7625
  bin: 3.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 4.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu184Asp
num of homozygotes: 3
reference allele: C

GenotypeQuality
all individuals: 1795
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.99592277251469e-5
allele num: 66712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.320000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

MQRankSum
type: SiteQuality
SIO_000300: -2.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.782e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.98e1

DP
type: SiteQuality
SIO_000300: 3.482807e6

QD
type: SiteQuality
SIO_000300: 1.155e1

GenotypeQuality
all individuals: 1132
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1796
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4738
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 3.31e0

MQRankSum
type: SiteQuality
SIO_000300: -3.53e-1

DP
type: SiteQuality
SIO_000300: 3.482345e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.64e-1

QD
type: SiteQuality
SIO_000300: 1.415e1

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.828e0

VQSLOD
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.59e-1

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.482218e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.135e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

MQRankSum
type: SiteQuality
SIO_000300: 7.56e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 1.926e1

FS
type: SiteQuality
SIO_000300: 3.968e0

VQSLOD
type: SiteQuality
SIO_000300: -9.242e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.658e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 3.482194e6

FS
type: SiteQuality
SIO_000300: 1.029e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.24e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

VQSLOD
type: SiteQuality
SIO_000300: -7.611e-1

QD
type: SiteQuality
SIO_000300: 1.494e1

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 536
bin: 9.25e1
variant carriers: 13

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 7

GenotypeQuality
all individuals: 36107
bin: 9.75e1
variant carriers: 32537

African
type: Population
allele count: 1688
allele frequency: 1.631233088519521e-1
allele num: 10348
num of homozygotes: 138

European (Non-Finnish)
type: Population
allele count: 23747
allele frequency: 3.560803718698455e-1
allele num: 66690
num of homozygotes: 4317

European (Finnish)
type: Population
allele count: 2523
allele frequency: 3.814635621409132e-1
allele num: 6614
num of homozygotes: 487

East Asian
type: Population
allele count: 2231
allele frequency: 2.58277379022922e-1
allele num: 8638
num of homozygotes: 306

South Asian
type: Population
allele count: 4255
allele frequency: 2.577225923682617e-1
allele num: 16510
num of homozygotes: 580

Other
type: Population
allele count: 306
allele frequency: 3.377483443708609e-1
allele num: 906
num of homozygotes: 50

Latino
type: Population
allele count: 4674
allele frequency: 4.041854029747492e-1
allele num: 11564
num of homozygotes: 926

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.95e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.77e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 4.444249e6

QD
type: SiteQuality
SIO_000300: 1.966e1

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1387
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.99790073474284e-5
allele num: 66690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: 5.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.95e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.966e1

DP
type: SiteQuality
SIO_000300: 4.444249e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.77e0

GenotypeQuality
all individuals: 5979
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2865
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499700059988002e-5
allele num: 66680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.16e0

DP
type: SiteQuality
SIO_000300: 1.981621e6

QD
type: SiteQuality
SIO_000300: 1.047e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.174e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.09e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.34e-2

FS
type: SiteQuality
SIO_000300: 6.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1640
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5973
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.91e-1

MQ
type: SiteQuality
SIO_000300: 5.935e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.747e0

VQSLOD
type: SiteQuality
SIO_000300: -4.231e-1

QD
type: SiteQuality
SIO_000300: 1.768e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.979849e6

GenotypeQuality
all individuals: 98
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9284
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004897983713453e-5
allele num: 66558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.944012441679627e-4
allele num: 10288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

QD
type: SiteQuality
SIO_000300: 1.469e1

DP
type: SiteQuality
SIO_000300: 1.974311e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.43e0

FS
type: SiteQuality
SIO_000300: 1.468e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5955
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.004897983713453e-5
allele num: 66558
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.974311e6

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.469e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.43e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66528
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -9.86e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.03e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66534
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.543e1

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.688e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

MQRankSum
type: SiteQuality
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DP
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.09e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66524
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.725734292939116e-5
allele num: 10282
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.971495e6

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.911e1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -5.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.59e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8648
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503578516870151e-5
allele num: 66508
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.710000000000001e0

FS
type: SiteQuality
SIO_000300: 4.695e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.969641e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.014e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.993e0

MQ
type: SiteQuality
SIO_000300: 6.018e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.512499623958364e-5
allele num: 66482
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16500
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.71e-1

FS
type: SiteQuality
SIO_000300: 1.925e0

DP
type: SiteQuality
SIO_000300: 1.968175e6

MQRankSum
type: SiteQuality
SIO_000300: 4.62e-1

MQ
type: SiteQuality
SIO_000300: 5.912e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.419999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.245e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e-1

QD
type: SiteQuality
SIO_000300: 1.499e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.052821561785585e-4
allele num: 66488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.961e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.967491e6

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.784e0

QD
type: SiteQuality
SIO_000300: 1.44e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50407604608489e-5
allele num: 66486
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.965754e6

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
type: Population
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African
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allele frequency: 3.894080996884735e-4
allele num: 10272
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66486
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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allele frequency: 8.646031471554557e-5
allele num: 11566
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African
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East Asian
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European (Non-Finnish)
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Other
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European (Finnish)
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allele frequency: 0.0e0
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Non-Finnish)
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East Asian
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European (Finnish)
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allele num: 6614
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Latino
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Other
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ReadPosRankSum
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DP
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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African
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Latino
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East Asian
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Other
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South Asian
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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FS
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DP
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ClippingRankSum
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ReadPosRankSum
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QD
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MQ
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34403
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.275100401606425e-5
allele num: 15936
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66232
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

QD
type: SiteQuality
SIO_000300: 1.585e1

VQSLOD
type: SiteQuality
SIO_000300: 3.61e0

MQRankSum
type: SiteQuality
SIO_000300: 1.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

DP
type: SiteQuality
SIO_000300: 1.941308e6

GenotypeQuality
all individuals: 2727
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5879
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2813
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34156
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730702665282105e-4
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66198
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.938458e6

MQ
type: SiteQuality
SIO_000300: 5.964e1

MQRankSum
type: SiteQuality
SIO_000300: 4.49e-1

QD
type: SiteQuality
SIO_000300: 1.368e1

FS
type: SiteQuality
SIO_000300: 7.988e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.772e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
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GenotypeQuality
all individuals: 5869
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2749
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GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513683700653911e-5
allele num: 66064
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15476
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.093e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.444e0

MQRankSum
type: SiteQuality
SIO_000300: -3.94e-1

QD
type: SiteQuality
SIO_000300: 2.685e1

DP
type: SiteQuality
SIO_000300: 1.92301e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.218e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

GenotypeQuality
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bin: 9.75e1
variant carriers: 293

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32926
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.79896013864818e-4
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.072935960890293e-5
allele num: 65866
num of homozygotes: 0

African
type: Population
allele count: 286
allele frequency: 2.805021577089055e-2
allele num: 10196
num of homozygotes: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14946
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

FS
type: SiteQuality
SIO_000300: 5.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.723e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.05e-2

DP
type: SiteQuality
SIO_000300: 1.880917e6

QD
type: SiteQuality
SIO_000300: 1.273e1

MQ
type: SiteQuality
SIO_000300: 5.946e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2635
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variant carriers: 0

GenotypeQuality
all individuals: 5415
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519618271890101e-5
allele num: 65806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.95e0

QD
type: SiteQuality
SIO_000300: 1.154e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.307e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.01e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.872756e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.851e0

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
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GenotypeQuality
all individuals: 109
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variant carriers: 0

GenotypeQuality
all individuals: 59
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GenotypeQuality
all individuals: 5439
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 156
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variant carriers: 0

GenotypeQuality
all individuals: 897
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variant carriers: 0

GenotypeQuality
all individuals: 2740
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.024803387779795e-4
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.562598856308554e-5
allele num: 65752
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.194e0

DP
type: SiteQuality
SIO_000300: 1.866737e6

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.107e0

QD
type: SiteQuality
SIO_000300: 1.354e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.934e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.189e0

GenotypeQuality
all individuals: 2642
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5439
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3561
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1521
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32505
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variant carriers: 0

GenotypeQuality
all individuals: 109
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GenotypeQuality
all individuals: 95
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GenotypeQuality
all individuals: 764
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520866285436184e-5
allele num: 65752
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

QD
type: SiteQuality
SIO_000300: 1.354e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.189e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

FS
type: SiteQuality
SIO_000300: 3.194e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.107e0

DP
type: SiteQuality
SIO_000300: 1.866737e6

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32298
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1522
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variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8518
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 5435
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.043862052171795e-5
allele num: 65706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14362
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.05e-1

QD
type: SiteQuality
SIO_000300: 1.142e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.608e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.82e-1

FS
type: SiteQuality
SIO_000300: 6.571e0

DP
type: SiteQuality
SIO_000300: 1.864471e6

GenotypeQuality
all individuals: 576
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 4.25e1
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GenotypeQuality
all individuals: 228
bin: 4.75e1
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GenotypeQuality
all individuals: 3560
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552939714880269e-5
allele num: 64394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8860
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

MQ
type: SiteQuality
SIO_000300: 5.319e1

QD
type: SiteQuality
SIO_000300: 3.52e0

MQRankSum
type: SiteQuality
SIO_000300: -5.906e0

VQSLOD
type: SiteQuality
SIO_000300: -4.042e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.64e0

FS
type: SiteQuality
SIO_000300: 1.037e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.63e-1

DP
type: SiteQuality
SIO_000300: 1.843619e6

GenotypeQuality
all individuals: 30429
bin: 6.25e1
variant carriers: 18

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 12

GenotypeQuality
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bin: 7.25e1
variant carriers: 15

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 9

GenotypeQuality
all individuals: 11911
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variant carriers: 11010

GenotypeQuality
all individuals: 368
bin: 8.75e1
variant carriers: 10

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 11

European (Non-Finnish)
type: Population
allele count: 5627
allele frequency: 8.626927912182258e-2
allele num: 65226
num of homozygotes: 183

Other
type: Population
allele count: 86
allele frequency: 1.011764705882353e-1
allele num: 850
num of homozygotes: 4

Latino
type: Population
allele count: 549
allele frequency: 4.764797778163513e-2
allele num: 11522
num of homozygotes: 12

European (Finnish)
type: Population
allele count: 535
allele frequency: 8.093797276853253e-2
allele num: 6610
num of homozygotes: 13

East Asian
type: Population
allele count: 378
allele frequency: 4.391263940520446e-2
allele num: 8608
num of homozygotes: 7

African
type: Population
allele count: 3140
allele frequency: 3.07843137254902e-1
allele num: 10200
num of homozygotes: 440

South Asian
type: Population
allele count: 1485
allele frequency: 1.146010186757216e-1
allele num: 12958
num of homozygotes: 79

DP
type: SiteQuality
SIO_000300: 2.150675e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.92e-2

MQ
type: SiteQuality
SIO_000300: 5.256e1

MQRankSum
type: SiteQuality
SIO_000300: -5.398e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.85e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

QD
type: SiteQuality
SIO_000300: 1.74e0

GenotypeQuality
all individuals: 2211
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7537
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30431
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1917
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5392
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.253761283851555e-4
allele num: 7976
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5708
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.688044952528579e-5
allele num: 10322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55696
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.284e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.076e0

MQRankSum
type: SiteQuality
SIO_000300: -6.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.43e0

FS
type: SiteQuality
SIO_000300: 5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.289999999999999e0

DP
type: SiteQuality
SIO_000300: 1.422634e6

GenotypeQuality
all individuals: 3064
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 327
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5664
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.259763164525069e-4
allele num: 7938
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.815409193232155e-5
allele num: 55084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.37612e6

MQ
type: SiteQuality
SIO_000300: 5.911e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

GenotypeQuality
all individuals: 2205
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2986
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7535
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 366
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variant carriers: 0

GenotypeQuality
all individuals: 1908
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.283932501834189e-4
allele num: 54520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4958
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.785076758300607e-4
allele num: 5602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7884
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

QD
type: SiteQuality
SIO_000300: 1.37e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.69e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.39e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 5.53e-1

DP
type: SiteQuality
SIO_000300: 1.331332e6

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2230
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7557
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.787310098302055e-5
allele num: 55950
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8010
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5736
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.77430801987225e-4
allele num: 5636
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.427e-1

QD
type: SiteQuality
SIO_000300: 1.098e1

DP
type: SiteQuality
SIO_000300: 1.456947e6

VQSLOD
type: SiteQuality
SIO_000300: 6.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.38e-1

FS
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2213
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7553
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 365
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variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1223
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9420
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 4.011231448054553e-4
allele num: 4986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10482
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.936e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.98e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.69e-1

QD
type: SiteQuality
SIO_000300: 1.269e1

MQRankSum
type: SiteQuality
SIO_000300: 6.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-1

DP
type: SiteQuality
SIO_000300: 1.334124e6

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

GenotypeQuality
all individuals: 2223
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2564
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1928
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variant carriers: 0

GenotypeQuality
all individuals: 142
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variant carriers: 0

GenotypeQuality
all individuals: 30554
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5766
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.780119624038735e-5
allele num: 56176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7994
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.912e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.71e0

DP
type: SiteQuality
SIO_000300: 1.470899e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-1

GenotypeQuality
all individuals: 296
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 857
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variant carriers: 0

GenotypeQuality
all individuals: 7554
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variant carriers: 0

GenotypeQuality
all individuals: 30562
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2340
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GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 1930
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variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7976
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55910
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.733102253032929e-4
allele num: 5770
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.203e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.87e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.312e0

QD
type: SiteQuality
SIO_000300: 1.582e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.16e-1

DP
type: SiteQuality
SIO_000300: 1.446527e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2747
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.813499691705052e-5
allele num: 55142
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7936
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

FS
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

MQRankSum
type: SiteQuality
SIO_000300: 5.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.74e-1

DP
type: SiteQuality
SIO_000300: 1.399149e6

QD
type: SiteQuality
SIO_000300: 1.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.679e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.026e0

GenotypeQuality
all individuals: 30591
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1918
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2031
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 254
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.808056700658132e-5
allele num: 55308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7938
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

VQSLOD
type: SiteQuality
SIO_000300: -1.067e0

DP
type: SiteQuality
SIO_000300: 1.412698e6

QD
type: SiteQuality
SIO_000300: 3.02e0

MQ
type: SiteQuality
SIO_000300: 5.317e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.269e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.09e-1

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30590
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.834727726405401e-5
allele num: 54504
num of homozygotes: 0

African
type: Population
allele count: 155
allele frequency: 2.995747970622343e-2
allele num: 5174
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5630
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.812428516965307e-4
allele num: 10492
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.483679525222552e-3
allele num: 674
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8996
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7890
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.408e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.141e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.418e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 1.354957e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.79e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
all individuals: 183
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2523
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1898
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.27000254000508e-4
allele num: 7874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54232
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4970
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

QD
type: SiteQuality
SIO_000300: 8.220000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -8.37e-1

FS
type: SiteQuality
SIO_000300: 5.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.610000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

DP
type: SiteQuality
SIO_000300: 1.327865e6

MQ
type: SiteQuality
SIO_000300: 5.944e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.385e0

GenotypeQuality
all individuals: 173
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.564455569461827e-5
allele num: 63920
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.135e0

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 1.607e0

QD
type: SiteQuality
SIO_000300: 9.76e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e-1

DP
type: SiteQuality
SIO_000300: 1.618256e6

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165501165501166e-4
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64276
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.583e0

FS
type: SiteQuality
SIO_000300: 5.666e0

MQRankSum
type: SiteQuality
SIO_000300: 1.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.38e-1

DP
type: SiteQuality
SIO_000300: 1.592135e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

QD
type: SiteQuality
SIO_000300: 1.141e1

MQ
type: SiteQuality
SIO_000300: 5.984e1

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555935895441108e-5
allele num: 64270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.5e0

FS
type: SiteQuality
SIO_000300: 2.15e0

MQ
type: SiteQuality
SIO_000300: 5.897e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

QD
type: SiteQuality
SIO_000300: 8.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.062e-1

DP
type: SiteQuality
SIO_000300: 1.591676e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2746
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1030
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9352
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37562
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.966955153422502e-4
allele num: 10168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64064
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.179999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.11e0

DP
type: SiteQuality
SIO_000300: 1.581604e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQ
type: SiteQuality
SIO_000300: 5.901e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.41e-1

QD
type: SiteQuality
SIO_000300: 1.35e1

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1057
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 331
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 37581
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.561670362619858e-5
allele num: 64034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169864295741694e-4
allele num: 8548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9546
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-1

FS
type: SiteQuality
SIO_000300: 1.381e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.99e0

QD
type: SiteQuality
SIO_000300: 1.404e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

DP
type: SiteQuality
SIO_000300: 1.580977e6

GenotypeQuality
all individuals: 2676
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37570
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 381
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variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.180661577608143e-4
allele num: 9432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63980
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.223e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.79e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 1.5322e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.578898e6

MQRankSum
type: SiteQuality
SIO_000300: 8.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.1e0

VQSLOD
type: SiteQuality
SIO_000300: -2.06e0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 147

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.53857791225416e-4
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.061571125265393e-4
allele num: 9420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 142
allele frequency: 2.219790526809442e-3
allele num: 63970
num of homozygotes: 1

Latino
type: Population
allele count: 2
allele frequency: 1.741553465691397e-4
allele num: 11484
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 1.743e0

DP
type: SiteQuality
SIO_000300: 1.581674e6

VQSLOD
type: SiteQuality
SIO_000300: 3.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

QD
type: SiteQuality
SIO_000300: 1.301e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.966e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 33
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GenotypeQuality
all individuals: 1024
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563232765358762e-5
allele num: 63970
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.581674e6

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.32e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

VQSLOD
type: SiteQuality
SIO_000300: 3.78e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

FS
type: SiteQuality
SIO_000300: 1.743e0

QD
type: SiteQuality
SIO_000300: 1.301e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.966e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9326
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.709284096847239e-5
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63940
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.995e0

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.845e1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.477e0

InbreedingCoeff
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SIO_000300: -2.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

MQRankSum
type: SiteQuality
SIO_000300: -9.52e-1

DP
type: SiteQuality
SIO_000300: 1.571962e6

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3005
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GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 331
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GenotypeQuality
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GenotypeQuality
all individuals: 1267
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GenotypeQuality
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GenotypeQuality
all individuals: 27
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GenotypeQuality
all individuals: 60
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.710801393728223e-5
allele num: 11480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.407877858774208e-4
allele num: 63926
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9264
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.202e0

QD
type: SiteQuality
SIO_000300: 1.347e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

MQ
type: SiteQuality
SIO_000300: 5.92e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

DP
type: SiteQuality
SIO_000300: 1.570603e6

MQRankSum
type: SiteQuality
SIO_000300: 4.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.69e-1

GenotypeQuality
all individuals: 385
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1028
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.130478337089907e-5
allele num: 63888
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9190
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

QD
type: SiteQuality
SIO_000300: 1.252e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e0

VQSLOD
type: SiteQuality
SIO_000300: 6.16e-1

DP
type: SiteQuality
SIO_000300: 1.567365e6

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.805844283192783e-5
allele num: 10198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9136
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.96e-1

FS
type: SiteQuality
SIO_000300: 1.022e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-1

DP
type: SiteQuality
SIO_000300: 1.565025e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.357e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

VQSLOD
type: SiteQuality
SIO_000300: -1.262e0

QD
type: SiteQuality
SIO_000300: 2.378e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2709
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9128
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.566465114821893e-5
allele num: 63838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.314e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.81e-1

FS
type: SiteQuality
SIO_000300: 4.278e0

MQRankSum
type: SiteQuality
SIO_000300: -1.629e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.577e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.009e0

DP
type: SiteQuality
SIO_000300: 1.562342e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30
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GenotypeQuality
all individuals: 867
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.798157946306095e-5
allele num: 10206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

DP
type: SiteQuality
SIO_000300: 1.561909e6

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.925e0

VQSLOD
type: SiteQuality
SIO_000300: -3.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.335e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.51e-1

MQ
type: SiteQuality
SIO_000300: 5.403e1

QD
type: SiteQuality
SIO_000300: 9.529999999999999e0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37881
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 856
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.566514192618585e-5
allele num: 63836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9140
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.42e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.86e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

FS
type: SiteQuality
SIO_000300: 1.137e0

DP
type: SiteQuality
SIO_000300: 1.561241e6

VQSLOD
type: SiteQuality
SIO_000300: 8.34e-1

GenotypeQuality
all individuals: 1519
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 25
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9146
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
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African
type: Population
allele count: 1
allele frequency: 9.805844283192783e-5
allele num: 10198
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.463e1

DP
type: SiteQuality
SIO_000300: 1.560934e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.28e-1

VQSLOD
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.37e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.566857823321112e-5
allele num: 63822
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African
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East Asian
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Latino
type: Population
allele count: 1
allele frequency: 8.730574471800244e-5
allele num: 11454
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Other
type: Population
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allele num: 786
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South Asian
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allele num: 9154
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VQSLOD
type: SiteQuality
SIO_000300: -2.504e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.560359e6

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e-1

QD
type: SiteQuality
SIO_000300: 9.4e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.729050279329609e-5
allele num: 11456
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63826
num of homozygotes: 0

South Asian
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allele count: 0
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allele num: 9172
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African
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allele count: 3
allele frequency: 2.94233032561789e-4
allele num: 10196
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

MQ
type: SiteQuality
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QD
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 11
allele frequency: 1.725815055382974e-4
allele num: 63738
num of homozygotes: 0

African
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Latino
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allele frequency: 8.759635599159075e-5
allele num: 11416
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Other
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East Asian
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allele num: 8566
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South Asian
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allele count: 4
allele frequency: 4.317789291882556e-4
allele num: 9264
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.47e0

MQ
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
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FS
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8901
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.863878477017163e-5
allele num: 10138
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

FS
type: SiteQuality
SIO_000300: 1.555e0

DP
type: SiteQuality
SIO_000300: 1.54788e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.46e-1

MQ
type: SiteQuality
SIO_000300: 5.875e1

QD
type: SiteQuality
SIO_000300: 1.225e1

GenotypeQuality
all individuals: 2129
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 272
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37384
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8901
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9264
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.570746418698165e-5
allele num: 63664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQ
type: SiteQuality
SIO_000300: 5.875e1

QD
type: SiteQuality
SIO_000300: 1.225e1

VQSLOD
type: SiteQuality
SIO_000300: 4.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.35e-1

FS
type: SiteQuality
SIO_000300: 1.555e0

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

DP
type: SiteQuality
SIO_000300: 1.54788e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.64e-1

GenotypeQuality
all individuals: 262
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.570105197048202e-5
allele num: 63690
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9270
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.412e0

MQRankSum
type: SiteQuality
SIO_000300: -5.41e-1

MQ
type: SiteQuality
SIO_000300: 5.823e1

FS
type: SiteQuality
SIO_000300: 4.655e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.71e0

QD
type: SiteQuality
SIO_000300: 1.288e1

DP
type: SiteQuality
SIO_000300: 1.547312e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

GenotypeQuality
all individuals: 161
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2452
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2031
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 324
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variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63670
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.078050884001725e-4
allele num: 9276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.53e-1

QD
type: SiteQuality
SIO_000300: 1.286e1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

FS
type: SiteQuality
SIO_000300: 3.751e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.54578e6

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

GenotypeQuality
all individuals: 279
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2034
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variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2452
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8816
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 324
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.881422924901186e-5
allele num: 10120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

DP
type: SiteQuality
SIO_000300: 1.54578e6

FS
type: SiteQuality
SIO_000300: 3.751e0

QD
type: SiteQuality
SIO_000300: 1.286e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.53e-1

GenotypeQuality
all individuals: 309
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 851
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variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
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variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2021
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variant carriers: 0

GenotypeQuality
all individuals: 3376
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8787
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37623
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.571733936879165e-5
allele num: 63624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.031e0

VQSLOD
type: SiteQuality
SIO_000300: 7.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.92e-1

QD
type: SiteQuality
SIO_000300: 1.19e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.365e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

DP
type: SiteQuality
SIO_000300: 1.544069e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

GenotypeQuality
all individuals: 414
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 37167
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 818
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.575299306868305e-5
allele num: 63480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11338
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9340
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.299e1

FS
type: SiteQuality
SIO_000300: 6.153e0

DP
type: SiteQuality
SIO_000300: 1.531679e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 8.68e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

GenotypeQuality
all individuals: 219
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2327
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 798
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 261
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variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4355
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1953
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variant carriers: 0

GenotypeQuality
all individuals: 8530
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 2
allele frequency: 2.351281448389372e-4
allele num: 8506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10024
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

FS
type: SiteQuality
SIO_000300: 5.53e-1

QD
type: SiteQuality
SIO_000300: 1.232e1

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.009e0

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-2

DP
type: SiteQuality
SIO_000300: 1.522245e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-2

GenotypeQuality
all individuals: 390
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 314
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2252
bin: 7.25e1
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GenotypeQuality
all individuals: 298
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
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GenotypeQuality
all individuals: 941
bin: 9.75e1
variant carriers: 329

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1871
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8372
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.903638835319781e-5
allele num: 63262
num of homozygotes: 0

African
type: Population
allele count: 322
allele frequency: 3.216140631242509e-2
allele num: 10012
num of homozygotes: 5

Latino
type: Population
allele count: 9
allele frequency: 8.005692937199787e-4
allele num: 11242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9286
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

FS
type: SiteQuality
SIO_000300: 1.946e0

DP
type: SiteQuality
SIO_000300: 1.521962e6

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

QD
type: SiteQuality
SIO_000300: 1.365e1

GenotypeQuality
all individuals: 245
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 335
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 7.5e0
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GenotypeQuality
all individuals: 555
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2273
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8419
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variant carriers: 0

GenotypeQuality
all individuals: 36509
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1899
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.579928587227857e-5
allele num: 63294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.996001599360256e-5
allele num: 10004
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.313e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.146e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.5157e6

FS
type: SiteQuality
SIO_000300: 3.516e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

VQSLOD
type: SiteQuality
SIO_000300: 6.07e-1

GenotypeQuality
all individuals: 658
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7641
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1007
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1080
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33973
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6683
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1671
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.600256040966555e-5
allele num: 62490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10946
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.459467e6

VQSLOD
type: SiteQuality
SIO_000300: -1.063e0

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.493e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

QD
type: SiteQuality
SIO_000300: 1.109e1

FS
type: SiteQuality
SIO_000300: 1.411e0

MQ
type: SiteQuality
SIO_000300: 5.892e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.49e-1

GenotypeQuality
all individuals: 635
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 830
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7843
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 306
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33310
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1370
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 820
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1484
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 457
bin: 4.25e1
variant carriers: 0