1-167893789-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167893789
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167893789
    reference: chr 1
allele count: 1
allele frequency: 1.790189760114572e-5
allele num: 55860
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.110-14C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.110-14C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.110-14C>T
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/1-167893790-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167893790
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167893790
    reference: chr 1
allele count: 1
allele frequency: 1.731721677691961e-5
allele num: 57746
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.110-15T>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.110-15T>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.110-15T>G
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: A
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

1-167893791-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167893791
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167893791
    reference: chr 1
allele count: 1
allele frequency: 1.725030188028291e-5
allele num: 57970
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.110-16T>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.110-16T>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.110-16T>C
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

1-167893794-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167893794
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167893794
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 54994
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.110-19C>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.110-19C>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.110-19C>G
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

1-167893817-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167893817
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167893817
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 39374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.110-42A>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.110-42A>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.110-42A>G
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24690
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14534
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1658
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1534
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5688
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19312
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4372
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2783
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1645
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

1-167904929-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167904929
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167904929
    reference: chr 1
allele count: 1
allele frequency: 4.777830864787386e-5
allele num: 20930
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.109+42C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.109+42C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.109+42C>T
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37805
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4556
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1181
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1872
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 1673
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

1-167904929-GAGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167904929
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167904926
    reference: chr 1
allele count: 1
allele frequency: 4.777830864787386e-5
allele num: 20930
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.109+39_109+41delTCT
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.109+39_109+41delTCT
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.109+39_109+41delTCT
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37805
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1181
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3395
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4556
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29011
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1673
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1872
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1556
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: GAGA
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

1-167904937-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167904937
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167904937
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 20978
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.109+34T>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.109+34T>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.109+34T>C
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38066
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 361
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31906
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

1-167904939-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167904939
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167904939
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 20992
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.109+32C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.109+32C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.109+32C>T
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37984
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5875
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2807
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32184
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1300
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3701
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3893
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4759
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

1-167904944-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167904944
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167904944
    reference: chr 1
allele count: 1
allele frequency: 4.75511174512601e-5
allele num: 21030
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.109+27C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.109+27C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.109+27C>T
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7353
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1208
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 33000
  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 637
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD

1-167904945-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167904945
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167904945
    reference: chr 1
allele count: 25
allele frequency: 1.187987074700627e-3
allele num: 21044
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.109+26T>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.109+26T>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.109+26T>C
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 37194
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  variant carriers: 4
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7719
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  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 21
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4795
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
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  variant carriers: 3
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.75e1
  variant carriers: 2
num of homozygotes: 2
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-167904948-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167904948
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167904948
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 21064
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.109+23T>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.109+23T>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.109+23T>G
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
  all individuals: 2644
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 262
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

1-167904949-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167904949
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167904949
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 21078
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.109+22C>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.109+22C>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.109+22C>G
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36205
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
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  variant carriers: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2125
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1594
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7469
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4863
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1202
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1177
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

1-167904953-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167904953
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167904953
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 21148
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.109+18G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.109+18G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.109+18G>A
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11134
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35087
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1697
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32430
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9035
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

1-167904956-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167904956
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167904956
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 21240
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.109+15A>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.109+15A>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.109+15A>G
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 34019
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12659
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1179
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

1-167904975-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167904975
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167904975
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 21862
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.105A>G
  hgvsp: ENST00000271373.4:c.105A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.105A>G
  hgvsp: ENST00000367846.4:c.105A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.105A>G
  hgvsp: ENST00000458574.1:c.105A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20806
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro35Pro
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

1-167904977-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167904977
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167904977
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 21950
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.103C>T
  hgvsp: ENSP00000356820.4:p.Pro35Ser
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.103C>T
  hgvsp: ENSP00000271373.4:p.Pro35Ser
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.103C>T
  hgvsp: ENSP00000392874.1:p.Pro35Ser
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5008
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro35Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-167905000-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905000
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905000
    reference: chr 1
allele count: 1
allele frequency: 4.396763981709462e-5
allele num: 22744
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.80A>G
  hgvsp: ENSP00000356820.4:p.Lys27Arg
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.80A>G
  hgvsp: ENSP00000271373.4:p.Lys27Arg
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.80A>G
  hgvsp: ENSP00000392874.1:p.Lys27Arg
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24636
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23255
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4935
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21522
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22762
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys27Arg
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP

1-167905003-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905003
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905003
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 22650
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.77A>G
  hgvsp: ENSP00000356820.4:p.Glu26Gly
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.77A>G
  hgvsp: ENSP00000271373.4:p.Glu26Gly
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.77A>G
  hgvsp: ENSP00000392874.1:p.Glu26Gly
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24140
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23615
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4834
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu26Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

1-167905012-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905012
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905012
    reference: chr 1
allele count: 21
allele frequency: 9.197617379117028e-4
allele num: 22832
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.68T>C
  hgvsp: ENSP00000271373.4:p.Met23Thr
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.68T>C
  hgvsp: ENSP00000356820.4:p.Met23Thr
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.68T>C
  hgvsp: ENSP00000392874.1:p.Met23Thr
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 20
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Met23Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

1-167905015-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905015
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905015
    reference: chr 1
allele count: 1
allele frequency: 4.389815627743635e-5
allele num: 22780
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.65T>A
  hgvsp: ENSP00000271373.4:p.Leu22Gln
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.65T>A
  hgvsp: ENSP00000356820.4:p.Leu22Gln
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.65T>A
  hgvsp: ENSP00000392874.1:p.Leu22Gln
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22754
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
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  variant carriers: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4728
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Leu22Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

1-167905024-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905024
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905024
    reference: chr 1
allele count: 41
allele frequency: 1.828561234501829e-3
allele num: 22422
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.56A>G
  hgvsp: ENSP00000356820.4:p.Lys19Arg
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.56A>G
  hgvsp: ENSP00000271373.4:p.Lys19Arg
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.4T>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.56A>G
  hgvsp: ENSP00000392874.1:p.Lys19Arg
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20184
  bin: 7.5e0
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 1.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26903
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3168
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 9.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 26383
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1516
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 9.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1407
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4452
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 8.75e1
  variant carriers: 5
hgvs: p.Lys19Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-167905028-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905028
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905028
    reference: chr 1
allele count: 309
allele frequency: 1.394656075103809e-2
allele num: 22156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.52G>A
  hgvsp: ENSP00000271373.4:p.Asp18Asn
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.52G>A
  hgvsp: ENSP00000392874.1:p.Asp18Asn
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.52G>A
  hgvsp: ENSP00000356820.4:p.Asp18Asn
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.8C>T
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 27738
  bin: 2.5e0
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 1.25e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 19074
  bin: 7.5e0
  variant carriers: 262
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.75e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 8.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 7.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 8.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 7.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1497
  bin: 6.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 1471
  bin: 1.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 26909
  bin: 7.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2672
  bin: 1.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 14980
  bin: 2.25e1
  variant carriers: 27
hgvs: p.Asp18Asn
num of homozygotes: 10
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

1-167905049-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905049
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905049
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 21000
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.29C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.31G>C
  hgvsp: ENSP00000271373.4:p.Ala11Pro
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.31G>C
  hgvsp: ENSP00000356820.4:p.Ala11Pro
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.31G>C
  hgvsp: ENSP00000392874.1:p.Ala11Pro
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12945
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32791
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1245
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10510
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1557
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32156
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1627
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala11Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

1-167905050-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905050
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905050
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 20712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.30G>A
  hgvsp: ENST00000458574.1:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.30G>A
  hgvsp: ENST00000367846.4:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.30G>A
  hgvsp: ENST00000271373.4:c.30G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.30C>T
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12341
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32349
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3428
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg10Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

1-167905051-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905051
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905051
    reference: chr 1
allele count: 29
allele frequency: 1.404902625714563e-3
allele num: 20642
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.29G>A
  hgvsp: ENSP00000392874.1:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.29G>A
  hgvsp: ENSP00000356820.4:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.31C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.29G>A
  hgvsp: ENSP00000271373.4:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33330
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12029
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9319
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32398
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1928
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1881
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1128
  bin: 9.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 8.25e1
  variant carriers: 1
hgvs: p.Arg10Gln
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum

1-167905067-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905067
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905067
    reference: chr 1
allele count: 1
allele frequency: 5.246039240373518e-5
allele num: 19062
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.13G>C
  hgvsp: ENSP00000356820.4:p.Gly5Arg
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.13G>C
  hgvsp: ENSP00000271373.4:p.Gly5Arg
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.13G>C
  hgvsp: ENSP00000392874.1:p.Gly5Arg
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.47C>G
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35414
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5487
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1212
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33719
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1131
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2798
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly5Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

1-167905068-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905068
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905068
    reference: chr 1
allele count: 3
allele frequency: 1.563314226159458e-4
allele num: 19190
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.12C>G
  hgvsp: ENST00000458574.1:c.12C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.12C>G
  hgvsp: ENST00000367846.4:c.12C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.48G>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.12C>G
  hgvsp: ENST00000271373.4:c.12C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35543
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7811
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2437
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34175
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5819
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3060
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala4Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

1-167905071-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905071
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905071
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 18868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.9C>A
  hgvsp: ENST00000458574.1:c.9C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.9C>A
  hgvsp: ENST00000367846.4:c.9C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.51G>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.9C>A
  hgvsp: ENST00000271373.4:c.9C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 35740
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6925
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5134
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3007
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34165
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2626
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala3Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

1-167905082-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905082
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905082
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 18042
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-3G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.62C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.-3G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.-3G>A
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2489
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD

1-167905084-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905084
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905084
    reference: chr 1
allele count: 1
allele frequency: 5.582849486377847e-5
allele num: 17912
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.-5C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-5C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.64G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.-5C>T
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

1-167905089-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905089
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905089
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 17478
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.-10C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-10C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.-10C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.69G>A
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

1-167905094-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905094
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905094
    reference: chr 1
allele count: 1
allele frequency: 5.891363261458701e-5
allele num: 16974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.-15G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.-15G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-15G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.74C>T
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34440
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

1-167905096-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905096
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905096
    reference: chr 1
allele count: 1
allele frequency: 5.872680291284943e-5
allele num: 17028
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-17A>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.76T>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.-17A>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.-17A>G
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34599
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3283
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3210
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31906
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2559
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1049
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

1-167905097-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905097
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905097
    reference: chr 1
allele count: 1
allele frequency: 5.901097604154373e-5
allele num: 16946
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.-18A>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.77T>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-18A>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.-18A>G
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34460
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31752
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1049
  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2550
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

1-167905101-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905101
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905101
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 16736
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-22T>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.81A>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.-22T>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.-22T>C
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3762
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30539
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

1-167905129-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167905129
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167905129
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 15566
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000392874
  ensembl transcript: ENST00000458574
  gene symbol: MPC2
  hgvsc: ENST00000458574.1:c.-50C>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-50C>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.109G>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000356820
  ensembl transcript: ENST00000367846
  gene symbol: MPC2
  hgvsc: ENST00000367846.4:c.-50C>A
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
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  bin: 2.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1090
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genotype quality: GenotypeQuality
  all individuals: 815
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1177
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum

1-167906101-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906101
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906101
    reference: chr 1
allele count: 1
allele frequency: 5.163688939378292e-5
allele num: 19366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+354C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-49C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-49C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-49C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+751C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-49C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-49C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+76G>A
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17777
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6939
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7337
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1271
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-167906104-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906104
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906104
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 19832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-46C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+754C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-46C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+73G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-46C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+357C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-46C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-46C>T
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29035
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18095
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5453
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-167906110-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906110
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906110
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 20796
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+363C>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+760C>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+67G>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-40C>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-40C>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-40C>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-40C>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-40C>A
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20754
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3605
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26934
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4711
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15870
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22944
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1838
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

1-167906113-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906113
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906113
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 21180
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-37G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-37G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+366G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+64C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-37G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-37G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+763G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-37G>A
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22559
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18402
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2288
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21882
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

1-167906121-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906121
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906121
    reference: chr 1
allele count: 1
allele frequency: 4.171185450905147e-5
allele num: 23974
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-29C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+771C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-29C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-29C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-29C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-29C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+56G>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+374C>G
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20006
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1788
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

1-167906123-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906123
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906123
    reference: chr 1
allele count: 2
allele frequency: 8.124136810463888e-5
allele num: 24618
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-27C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+54G>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+376C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-27C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+773C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-27C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-27C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-27C>G
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18473
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1994
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1792
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum

1-167906123-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906123
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906123
    reference: chr 1
allele count: 1
allele frequency: 4.062068405231944e-5
allele num: 24618
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-27C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+773C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-27C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-27C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+376C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+54G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-27C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-27C>T
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28511
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18473
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1909
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1535
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1994
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16889
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1792
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

1-167906125-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906125
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906125
    reference: chr 1
allele count: 1
allele frequency: 3.908387399359025e-5
allele num: 25586
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+378C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-25C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+52G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-25C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-25C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-25C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-25C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+775C>T
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29599
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17014
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1413
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

1-167906126-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906126
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906126
    reference: chr 1
allele count: 1
allele frequency: 3.816502557056713e-5
allele num: 26202
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+51G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-24C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-24C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-24C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+379C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-24C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-24C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+776C>T
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15093
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1581
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27793
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP

1-167906130-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906130
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906130
    reference: chr 1
allele count: 1
allele frequency: 3.502381619501261e-5
allele num: 28552
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+780C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-20C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-20C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-20C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-20C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-20C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+47G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+383C>T
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13400
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31992
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1215
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1400
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4179
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

1-167906134-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906134
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906134
    reference: chr 1
allele count: 1
allele frequency: 3.140506249607436e-5
allele num: 31842
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-16C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-16C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+784C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+43G>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-16C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-16C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+387C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-16C>G
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10492
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1680
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-167906135-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906135
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906135
    reference: chr 1
allele count: 3
allele frequency: 9.07605736068252e-5
allele num: 33054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-15G>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-15G>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+785G>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-15G>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-15G>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+388G>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-15G>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+42C>G
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9751
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33538
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4447
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5696
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1429
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-167906141-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906141
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906141
    reference: chr 1
allele count: 1
allele frequency: 2.48558361503281e-5
allele num: 40232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+36C>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-9G>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-9G>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+394G>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-9G>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-9G>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+791G>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-9G>T
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4390
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32291
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

1-167906144-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906144
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906144
    reference: chr 1
allele count: 1
allele frequency: 2.256826901376664e-5
allele num: 44310
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-6A>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-6A>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+794A>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+33T>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-6A>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+397A>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-6A>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-6A>G
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32535
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4300
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5498
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1440
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

1-167906145-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906145
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906145
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 45328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+32C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+398G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-5G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-5G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-5G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-5G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-5G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+795G>A
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 32283
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5083
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-167906149-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906149
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906149
    reference: chr 1
allele count: 5
allele frequency: 1.009774618305194e-4
allele num: 49516
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.-1C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.-1C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+402C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.-1C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+28G>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.-1C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+799C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.-1C>G
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13358
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31047
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30300
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1603
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

1-167906156-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906156
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906156
    reference: chr 1
allele count: 9
allele frequency: 1.603249251817016e-4
allele num: 56136
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.7C>T
  hgvsp: ENSP00000396238.2:p.Arg3Trp
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.7C>T
  hgvsp: ENSP00000356817.3:p.Arg3Trp
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+409C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+21G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.7C>T
  hgvsp: ENSP00000432304.1:p.Arg3Trp
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.7C>T
  hgvsp: ENSP00000356814.3:p.Arg3Trp
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.7C>T
  hgvsp: ENSP00000311949.6:p.Arg3Trp
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+806C>T
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28640
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15124
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3341
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 998
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg3Trp
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

1-167906159-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906159
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906159
    reference: chr 1
allele count: 2
allele frequency: 3.295761650517435e-5
allele num: 60684
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.10G>A
  hgvsp: ENSP00000356814.3:p.Gly4Ser
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+412G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+18C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.10G>A
  hgvsp: ENSP00000396238.2:p.Gly4Ser
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.10G>A
  hgvsp: ENSP00000356817.3:p.Gly4Ser
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.10G>A
  hgvsp: ENSP00000311949.6:p.Gly4Ser
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.10G>A
  hgvsp: ENSP00000432304.1:p.Gly4Ser
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+809G>A
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26997
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1516
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2905
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly4Ser
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS

1-167906159-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906159
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906159
    reference: chr 1
allele count: 25
allele frequency: 4.119702063146793e-4
allele num: 60684
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+809G>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.10G>C
  hgvsp: ENSP00000356814.3:p.Gly4Arg
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.10G>C
  hgvsp: ENSP00000396238.2:p.Gly4Arg
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+412G>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.10G>C
  hgvsp: ENSP00000356817.3:p.Gly4Arg
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.10G>C
  hgvsp: ENSP00000311949.6:p.Gly4Arg
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+18C>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.10G>C
  hgvsp: ENSP00000432304.1:p.Gly4Arg
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26997
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1516
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26486
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1477
  bin: 9.75e1
  variant carriers: 24
hgvs: p.Gly4Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

1-167906162-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906162
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906162
    reference: chr 1
allele count: 1
allele frequency: 1.54832316601121e-5
allele num: 64586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.13G>A
  hgvsp: ENSP00000356817.3:p.Gly5Ser
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.13G>A
  hgvsp: ENSP00000396238.2:p.Gly5Ser
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+415G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.13G>A
  hgvsp: ENSP00000311949.6:p.Gly5Ser
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.13G>A
  hgvsp: ENSP00000432304.1:p.Gly5Ser
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.13G>A
  hgvsp: ENSP00000356814.3:p.Gly5Ser
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+15C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+812G>A
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4138
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly5Ser
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ

1-167906173-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906173
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906173
    reference: chr 1
allele count: 5
allele frequency: 6.699180020365507e-5
allele num: 74636
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.24A>G
  hgvsp: ENST00000432587.2:c.24A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+426A>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+823A>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-58+4T>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.24A>G
  hgvsp: ENST00000367843.3:c.24A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.24A>G
  hgvsp: ENST00000470721.1:c.24A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.24A>G
  hgvsp: ENST00000312263.6:c.24A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.24A>G
  hgvsp: ENST00000367840.3:c.24A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1859
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2914
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21054
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
hgvs: c.-58+4T>C
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

1-167906180-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906180
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906180
    reference: chr 1
allele count: 14
allele frequency: 1.739995028585633e-4
allele num: 80460
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.31T>C
  hgvsp: ENST00000432587.2:c.31T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+433T>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.31T>C
  hgvsp: ENST00000367843.3:c.31T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-61A>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.31T>C
  hgvsp: ENST00000367840.3:c.31T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.31T>C
  hgvsp: ENST00000470721.1:c.31T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+830T>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.31T>C
  hgvsp: ENST00000312263.6:c.31T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25601
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18752
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 9.75e1
  variant carriers: 13
hgvs: p.Leu11Leu
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

1-167906190-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906190
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906190
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 87056
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+840T>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.41T>A
  hgvsp: ENSP00000311949.6:p.Val14Glu
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-71A>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.41T>A
  hgvsp: ENSP00000356814.3:p.Val14Glu
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.41T>A
  hgvsp: ENSP00000396238.2:p.Val14Glu
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.41T>A
  hgvsp: ENSP00000432304.1:p.Val14Glu
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+443T>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.41T>A
  hgvsp: ENSP00000356817.3:p.Val14Glu
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15600
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1475
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val14Glu
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

1-167906202-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906202
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906202
    reference: chr 1
allele count: 1
allele frequency: 1.096371011950444e-5
allele num: 91210
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.53C>T
  hgvsp: ENSP00000356814.3:p.Ser18Phe
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+455C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.53C>T
  hgvsp: ENSP00000432304.1:p.Ser18Phe
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.53C>T
  hgvsp: ENSP00000396238.2:p.Ser18Phe
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-83G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.53C>T
  hgvsp: ENSP00000356817.3:p.Ser18Phe
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+852C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.53C>T
  hgvsp: ENSP00000311949.6:p.Ser18Phe
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4517
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser18Phe
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-167906203-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906203
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906203
    reference: chr 1
allele count: 1
allele frequency: 1.092514093431805e-5
allele num: 91532
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+853C>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.54C>A
  hgvsp: ENST00000367840.3:c.54C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.54C>A
  hgvsp: ENST00000367843.3:c.54C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.54C>A
  hgvsp: ENST00000432587.2:c.54C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-84G>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.54C>A
  hgvsp: ENST00000312263.6:c.54C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.54C>A
  hgvsp: ENST00000470721.1:c.54C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+456C>A
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14218
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser18Ser
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

1-167906203-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906203
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906203
    reference: chr 1
allele count: 8
allele frequency: 8.740112747454443e-5
allele num: 91532
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.54C>T
  hgvsp: ENST00000367843.3:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-84G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+853C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.54C>T
  hgvsp: ENST00000312263.6:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.54C>T
  hgvsp: ENST00000367840.3:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+456C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.54C>T
  hgvsp: ENST00000432587.2:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.54C>T
  hgvsp: ENST00000470721.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27654
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4577
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6630
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14218
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser18Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

1-167906206-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906206
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906206
    reference: chr 1
allele count: 1
allele frequency: 1.086106525328004e-5
allele num: 92072
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-87G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.57C>T
  hgvsp: ENST00000367840.3:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.57C>T
  hgvsp: ENST00000367843.3:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.57C>T
  hgvsp: ENST00000470721.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.57C>T
  hgvsp: ENST00000432587.2:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+459C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+856C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.57C>T
  hgvsp: ENST00000312263.6:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13061
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3075
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2027
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13979
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu19Leu
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD

1-167906221-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906221
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906221
    reference: chr 1
allele count: 1
allele frequency: 1.06069284456607e-5
allele num: 94278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.72G>T
  hgvsp: ENST00000312263.6:c.72G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.72G>T
  hgvsp: ENST00000367840.3:c.72G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.72G>T
  hgvsp: ENST00000470721.1:c.72G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.72G>T
  hgvsp: ENST00000432587.2:c.72G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+474G>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.72G>T
  hgvsp: ENST00000367843.3:c.72G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+871G>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-102C>A
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11932
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1585
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1335
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1225
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24140
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro24Pro
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

1-167906224-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906224
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906224
    reference: chr 1
allele count: 1
allele frequency: 1.057775709238613e-5
allele num: 94538
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.75C>T
  hgvsp: ENST00000432587.2:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.75C>T
  hgvsp: ENST00000312263.6:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+477C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.75C>T
  hgvsp: ENST00000470721.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.75C>T
  hgvsp: ENST00000367843.3:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.75C>T
  hgvsp: ENST00000367840.3:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-105G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+874C>T
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5700
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2039
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1498
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser25Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

1-167906225-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906225
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906225
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 94558
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.76C>T
  hgvsp: ENSP00000396238.2:p.Arg26Trp
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.76C>T
  hgvsp: ENSP00000432304.1:p.Arg26Trp
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.76C>T
  hgvsp: ENSP00000356817.3:p.Arg26Trp
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-106G>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+478C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.76C>T
  hgvsp: ENSP00000356814.3:p.Arg26Trp
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+875C>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.76C>T
  hgvsp: ENSP00000311949.6:p.Arg26Trp
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11702
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5733
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7913
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12529
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2049
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1498
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3504
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg26Trp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

1-167906226-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906226
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906226
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 94734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+876G>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.77G>T
  hgvsp: ENSP00000396238.2:p.Arg26Leu
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.77G>T
  hgvsp: ENSP00000311949.6:p.Arg26Leu
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-107C>A
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+479G>T
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.77G>T
  hgvsp: ENSP00000356814.3:p.Arg26Leu
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.77G>T
  hgvsp: ENSP00000432304.1:p.Arg26Leu
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.77G>T
  hgvsp: ENSP00000356817.3:p.Arg26Leu
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11669
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8085
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3517
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1498
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1647
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1456
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg26Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

1-167906230-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906230
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906230
    reference: chr 1
allele count: 2
allele frequency: 2.106948716868232e-5
allele num: 94924
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.81G>A
  hgvsp: ENST00000470721.1:c.81G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.81G>A
  hgvsp: ENST00000367843.3:c.81G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.81G>A
  hgvsp: ENST00000432587.2:c.81G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.81G>A
  hgvsp: ENST00000312263.6:c.81G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+483G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.81G>A
  hgvsp: ENST00000367840.3:c.81G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-111C>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+880G>A
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5813
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21969
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1886
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11930
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1365
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19317
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu27Leu
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/1-167906237-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906237
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906237
    reference: chr 1
allele count: 2
allele frequency: 2.101855938793955e-5
allele num: 95154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.88C>A
  hgvsp: ENST00000470721.1:c.88C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.88C>A
  hgvsp: ENST00000432587.2:c.88C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.88C>A
  hgvsp: ENST00000367843.3:c.88C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.88C>A
  hgvsp: ENST00000367840.3:c.88C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+887C>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.88C>A
  hgvsp: ENST00000312263.6:c.88C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-118G>T
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+490C>A
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8528
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6029
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4053
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3601
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15942
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1255
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg30Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

1-167906237-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906237
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906237
    reference: chr 1
allele count: 1
allele frequency: 1.050927969396978e-5
allele num: 95154
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.88C>G
  hgvsp: ENSP00000396238.2:p.Arg30Gly
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+490C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.88C>G
  hgvsp: ENSP00000432304.1:p.Arg30Gly
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-118G>C
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+887C>G
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.88C>G
  hgvsp: ENSP00000356814.3:p.Arg30Gly
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.88C>G
  hgvsp: ENSP00000311949.6:p.Arg30Gly
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.88C>G
  hgvsp: ENSP00000356817.3:p.Arg30Gly
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21559
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6029
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8528
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15942
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2157
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3601
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3334
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg30Gly
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-167906239-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906239
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906239
    reference: chr 1
allele count: 109276
allele frequency: 1.0e0
allele num: 109276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.90A>C
  hgvsp: ENST00000312263.6:c.90A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+492A>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-120T>G
  variant of: http://identifiers.org/hgnc/24515
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.90A>C
  hgvsp: ENST00000367843.3:c.90A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.90A>C
  hgvsp: ENST00000432587.2:c.90A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.90A>C
  hgvsp: ENST00000367840.3:c.90A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+889A>C
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.90A>C
  hgvsp: ENST00000470721.1:c.90A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 3.25e1
  variant carriers: 4557
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.75e1
  variant carriers: 493
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 2.5e0
  variant carriers: 703
genotype depth: GenotypeDepth
  all individuals: 10433
  bin: 2.25e1
  variant carriers: 10433
genotype depth: GenotypeDepth
  all individuals: 4734
  bin: 7.5e0
  variant carriers: 4734
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 9.25e1
  variant carriers: 408
genotype depth: GenotypeDepth
  all individuals: 7627
  bin: 2.75e1
  variant carriers: 7627
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.75e1
  variant carriers: 475
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 9.75e1
  variant carriers: 1701
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 4.25e1
  variant carriers: 1347
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.25e1
  variant carriers: 567
genotype depth: GenotypeDepth
  all individuals: 11740
  bin: 1.75e1
  variant carriers: 11740
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 6.75e1
  variant carriers: 527
genotype depth: GenotypeDepth
  all individuals: 9493
  bin: 1.25e1
  variant carriers: 9493
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 489
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.75e1
  variant carriers: 514
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 8.25e1
  variant carriers: 549
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 3.75e1
  variant carriers: 2502
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.75e1
  variant carriers: 787
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.25e1
  variant carriers: 528
genotype quality: GenotypeQuality
  all individuals: 1915
  bin: 7.25e1
  variant carriers: 1915
genotype quality: GenotypeQuality
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 1237
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 1.75e1
  variant carriers: 1319
genotype quality: GenotypeQuality
  all individuals: 2359
  bin: 5.75e1
  variant carriers: 2359
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 4054
  bin: 6.75e1
  variant carriers: 4054
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 1.25e1
  variant carriers: 435
hgvs: p.Arg30Arg
num of homozygotes: 54638
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

1-167906245-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 167906245
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 167906245
    reference: chr 1
allele count: 1
allele frequency: 1.228410682259293e-5
allele num: 81406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000311949
  ensembl transcript: ENST00000312263
  gene symbol: DCAF6
  hgvsc: ENST00000312263.6:c.96G>A
  hgvsp: ENST00000312263.6:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000396238
  ensembl transcript: ENST00000432587
  gene symbol: DCAF6
  hgvsc: ENST00000432587.2:c.96G>A
  hgvsp: ENST00000432587.2:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000450548
  gene symbol: DCAF6
  hgvsc: ENST00000450548.1:n.330+895G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356814
  ensembl transcript: ENST00000367840
  gene symbol: DCAF6
  hgvsc: ENST00000367840.3:c.96G>A
  hgvsp: ENST00000367840.3:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000143164
  ensembl transcript: ENST00000470919
  gene symbol: DCAF6
  hgvsc: ENST00000470919.1:n.236+498G>A
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000356817
  ensembl transcript: ENST00000367843
  gene symbol: DCAF6
  hgvsc: ENST00000367843.3:c.96G>A
  hgvsp: ENST00000367843.3:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000143164
  ensembl protein: ENSP00000432304
  ensembl transcript: ENST00000470721
  gene symbol: DCAF6
  hgvsc: ENST00000470721.1:c.96G>A
  hgvsp: ENST00000470721.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30002
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000143158
  ensembl protein: ENSP00000271373
  ensembl transcript: ENST00000271373
  gene symbol: MPC2
  hgvsc: ENST00000271373.4:c.-126C>T
  variant of: http://identifiers.org/hgnc/24515
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3591
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17531
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1399
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3004
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 7.75e1
  variant carriers: 0
hgvs: c.96G>A
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: G

GenotypeQuality
all individuals: 91
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.640334910811795e-5
allele num: 27470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4672
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.637e0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.69e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.25e-1

QD
type: SiteQuality
SIO_000300: 1.7e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.25e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.39414e5

VQSLOD
type: SiteQuality
SIO_000300: -8.855e-1

GenotypeQuality
all individuals: 92
bin: 9.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.518896474065733e-5
allele num: 28418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3556
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.24613e5

QD
type: SiteQuality
SIO_000300: 2.64e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.25e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.249e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-2

FS
type: SiteQuality
SIO_000300: 6.107e0

GenotypeQuality
all individuals: 887
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5170
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.393199323689649e-5
allele num: 10646
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.67e-1

QD
type: SiteQuality
SIO_000300: 7.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.93e-2

DP
type: SiteQuality
SIO_000300: 7.14037e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 760
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4888
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.31e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.86326e5

VQSLOD
type: SiteQuality
SIO_000300: -1.067e0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

QD
type: SiteQuality
SIO_000300: 1.879e1

GenotypeQuality
all individuals: 2834
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3000
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3270
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8686
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.60073e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.49e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.604e0

VQSLOD
type: SiteQuality
SIO_000300: -2.719e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

QD
type: SiteQuality
SIO_000300: 1.442e1

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2806
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.124606387764283e-4
allele num: 8892
num of homozygotes: 0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 4.35529e5

QD
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.766e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.66e-2

FS
type: SiteQuality
SIO_000300: 2.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2806
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7910
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.124606387764283e-4
allele num: 8892
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.278e1

DP
type: SiteQuality
SIO_000300: 4.35529e5

FS
type: SiteQuality
SIO_000300: 2.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8916
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -6.97e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.115e0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 7916
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2812
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8922
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.028e1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.94e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

DP
type: SiteQuality
SIO_000300: 4.49911e5

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2816
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.118568232662192e-4
allele num: 8940
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.83e0

VQSLOD
type: SiteQuality
SIO_000300: -5.415e-1

InbreedingCoeff
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SIO_000300: -6.75e-2

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.9e1

DP
type: SiteQuality
SIO_000300: 4.60346e5

FS
type: SiteQuality
SIO_000300: 5.677e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e0

QD
type: SiteQuality
SIO_000300: 1.494e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 23

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

South Asian
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allele count: 20
allele frequency: 2.525252525252525e-3
allele num: 7920
num of homozygotes: 2

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 684
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 5.587840858292355e-4
allele num: 8948
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2818
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.65e-2

DP
type: SiteQuality
SIO_000300: 4.63045e5

VQSLOD
type: SiteQuality
SIO_000300: 4.96e-1

FS
type: SiteQuality
SIO_000300: 2.616e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 1.483e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2820
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8958
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7922
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.7077e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.48e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.095e0

GenotypeQuality
all individuals: 98
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7926
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8960
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.752e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.59e0

FS
type: SiteQuality
SIO_000300: 3.716e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.92e-2

DP
type: SiteQuality
SIO_000300: 4.73295e5

QD
type: SiteQuality
SIO_000300: 1.513e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7930
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 2824
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 9010
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

FS
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InbreedingCoeff
type: SiteQuality
SIO_000300: -6.21e-2

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

DP
type: SiteQuality
SIO_000300: 4.83408e5

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 2838
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7936
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 9060
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.94e-2

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -9.149e-1

DP
type: SiteQuality
SIO_000300: 4.92195e5

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 2910
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 9404
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 474
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

ReadPosRankSum
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-2

BaseQRankSum
type: SiteQuality
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FS
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

DP
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BaseQRankSum
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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FS
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QD
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MQRankSum
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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FS
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MQ
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VQSLOD
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QD
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DP
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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South Asian
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Other
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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InbreedingCoeff
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QD
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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FS
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.60187e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 358
bin: 9.25e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 2.116082224909311e-3
allele num: 9924
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2986
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8054
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.02e0

FS
type: SiteQuality
SIO_000300: 5.25e-1

DP
type: SiteQuality
SIO_000300: 5.58397e5

MQRankSum
type: SiteQuality
SIO_000300: 2.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.41e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

QD
type: SiteQuality
SIO_000300: 1.008e1

GenotypeQuality
all individuals: 1555
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 910
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8054
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.010917913465427e-4
allele num: 9892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.796e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

FS
type: SiteQuality
SIO_000300: 9.320000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.56e-2

DP
type: SiteQuality
SIO_000300: 5.52029e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.07e1

GenotypeQuality
all individuals: 637
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 162
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 16697
bin: 2.25e1
variant carriers: 7

South Asian
type: Population
allele count: 6
allele frequency: 7.455268389662028e-4
allele num: 8048
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 1.020408163265306e-3
allele num: 2940
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 5.154639175257732e-3
allele num: 194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 2.999586263963591e-3
allele num: 9668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 1.587301587301587e-2
allele num: 126
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.93e-2

DP
type: SiteQuality
SIO_000300: 5.32956e5

QD
type: SiteQuality
SIO_000300: 1.32e1

FS
type: SiteQuality
SIO_000300: 5.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
all individuals: 1366
bin: 9.75e1
variant carriers: 287

GenotypeQuality
all individuals: 366
bin: 9.25e1
variant carriers: 24

GenotypeQuality
all individuals: 165
bin: 3.25e1
variant carriers: 9

GenotypeQuality
all individuals: 4166
bin: 6.25e1
variant carriers: 27

East Asian
type: Population
allele count: 99
allele frequency: 1.050955414012739e-1
allele num: 942
num of homozygotes: 2

African
type: Population
allele count: 5
allele frequency: 1.736111111111111e-3
allele num: 2880
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.845018450184502e-3
allele num: 542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 1.694915254237288e-2
allele num: 118
num of homozygotes: 0

South Asian
type: Population
allele count: 186
allele frequency: 2.312282446544008e-2
allele num: 8044
num of homozygotes: 8

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 1.588646473204829e-3
allele num: 9442
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 5.319148936170213e-3
allele num: 188
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 1.132e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e-1

FS
type: SiteQuality
SIO_000300: 5.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e-1

DP
type: SiteQuality
SIO_000300: 5.35733e5

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

GenotypeQuality
all individuals: 3632
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 266
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1109
bin: 9.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8746
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.919e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.31e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 4.683e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.147e1

MQRankSum
type: SiteQuality
SIO_000300: -6.850000000000001e-1

GenotypeQuality
all individuals: 351
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9736
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1838
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7972
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

QD
type: SiteQuality
SIO_000300: 1.168e1

DP
type: SiteQuality
SIO_000300: 4.59949e5

FS
type: SiteQuality
SIO_000300: 6.729e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.419999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.419e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 267
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 707
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3399
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 572
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

South Asian
type: Population
allele count: 29
allele frequency: 3.637732062217762e-3
allele num: 7972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

DP
type: SiteQuality
SIO_000300: 4.59025e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.907e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.55e-2

QD
type: SiteQuality
SIO_000300: 1.107e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQRankSum
type: SiteQuality
SIO_000300: 3.63e-1

GenotypeQuality
all individuals: 1104
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2979
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2278
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.258811681772407e-4
allele num: 7944
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

MQRankSum
type: SiteQuality
SIO_000300: 3.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.36e-2

FS
type: SiteQuality
SIO_000300: 4.706e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.79e0

DP
type: SiteQuality
SIO_000300: 4.11892e5

VQSLOD
type: SiteQuality
SIO_000300: -3.005e0

QD
type: SiteQuality
SIO_000300: 1.122e1

GenotypeQuality
all individuals: 1055
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1105
bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7948
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 3.956739646531258e-4
allele num: 7582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2324
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

DP
type: SiteQuality
SIO_000300: 4.12257e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.340000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.397e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 1.353e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.32e-2

GenotypeQuality
all individuals: 1175
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7928
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.01438e5

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.033e0

QD
type: SiteQuality
SIO_000300: 6.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

GenotypeQuality
all individuals: 655
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1120
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2028
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6950
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.75e-2

DP
type: SiteQuality
SIO_000300: 3.80529e5

ClippingRankSum
type: SiteQuality
SIO_000300: 8.76e-1

FS
type: SiteQuality
SIO_000300: 3.214e0

MQRankSum
type: SiteQuality
SIO_000300: 1.88e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.18e0

GenotypeQuality
all individuals: 517
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2886
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.267748478701826e-4
allele num: 7888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1992
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.079e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 3.78098e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.317e0

QD
type: SiteQuality
SIO_000300: 1.348e1

MQRankSum
type: SiteQuality
SIO_000300: -3.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.79e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

GenotypeQuality
all individuals: 602
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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SIO_000300: 7.27e-1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.556662515566625e-4
allele num: 6424
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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DP
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FS
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6458
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 462
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African
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allele frequency: 5.747126436781609e-4
allele num: 1740
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 170
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

South Asian
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MQ
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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FS
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VQSLOD
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 7836
num of homozygotes: 0

Latino
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allele frequency: 3.08641975308642e-3
allele num: 324
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

VQSLOD
type: SiteQuality
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QD
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InbreedingCoeff
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ClippingRankSum
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MQ
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MQRankSum
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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FS
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 434
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South Asian
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allele frequency: 0.0e0
allele num: 7832
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

InbreedingCoeff
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SIO_000300: -8.05e-2

MQRankSum
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FS
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MQ
type: SiteQuality
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QD
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SIO_000300: 9.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
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SIO_000300: 3.43948e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 384
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5550
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.45e-2

MQ
type: SiteQuality
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BaseQRankSum
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.75e0

DP
type: SiteQuality
SIO_000300: 3.12452e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1600
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Other
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allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

South Asian
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allele frequency: 1.242236024844721e-4
allele num: 8050
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1220
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 7804
num of homozygotes: 0

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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BaseQRankSum
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.14e-2

DP
type: SiteQuality
SIO_000300: 4.32636e5

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.102e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8060
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 416
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Other
type: Population
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allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 4.43291e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.89e-2

QD
type: SiteQuality
SIO_000300: 1.1e1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 432
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8184
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.225e1

VQSLOD
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FS
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.36e-2

MQ
type: SiteQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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ClippingRankSum
type: SiteQuality
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MQRankSum
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MQ
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QD
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ReadPosRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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VQSLOD
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 4.370629370629371e-4
allele num: 2288
num of homozygotes: 0

South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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allele frequency: 0.0e0
allele num: 1862
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Other
type: Population
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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DP
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VQSLOD
type: SiteQuality
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MQ
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.44e-2

MQRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: 9.350000000000001e-1

FS
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1958
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.847063169560399e-4
allele num: 10828
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.124e1

DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.304e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10828
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.188777936281503e-4
allele num: 8412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1958
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-2

MQRankSum
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VQSLOD
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FS
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.53959e5

QD
type: SiteQuality
SIO_000300: 1.124e1

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.803073967339097e-4
allele num: 2082
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -3.06e-2

QD
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FS
type: SiteQuality
SIO_000300: 3.31e0

DP
type: SiteQuality
SIO_000300: 5.6831e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.927e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11768
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.173984503404555e-4
allele num: 8518
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.196e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.94e-2

FS
type: SiteQuality
SIO_000300: 1.3024e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

MQ
type: SiteQuality
SIO_000300: 5.739e1

QD
type: SiteQuality
SIO_000300: 3.063e1

DP
type: SiteQuality
SIO_000300: 5.75881e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2826
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.153668666359022e-4
allele num: 8668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13164
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.78e-1

MQ
type: SiteQuality
SIO_000300: 5.915e1

VQSLOD
type: SiteQuality
SIO_000300: -9.72e-1

QD
type: SiteQuality
SIO_000300: 1.586e1

FS
type: SiteQuality
SIO_000300: 6.149e0

DP
type: SiteQuality
SIO_000300: 6.07382e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.56e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.558e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1006
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8918
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.57116572479958e-5
allele num: 15218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.019e0

FS
type: SiteQuality
SIO_000300: 9.763e0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.16e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.46897e5

QD
type: SiteQuality
SIO_000300: 1.748e1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.876172607879925e-4
allele num: 15990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2896
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 244
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8996
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.68e0

MQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

DP
type: SiteQuality
SIO_000300: 6.5755e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.02e-2

QD
type: SiteQuality
SIO_000300: 9.619999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1620
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9494
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.841208365608056e-5
allele num: 20656
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

DP
type: SiteQuality
SIO_000300: 7.25355e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e0

FS
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1908
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
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MQ
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FS
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InbreedingCoeff
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SIO_000300: -1.26e-2

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 7.60277e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10906
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2004
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1028
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24052
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.068e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

QD
type: SiteQuality
SIO_000300: 1.64e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.21e-2

DP
type: SiteQuality
SIO_000300: 7.70238e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

GenotypeQuality
all individuals: 950
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12511
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4269
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1927
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 357
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 601
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 9.75e1
variant carriers: 4

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 8.431703204047217e-4
allele num: 1186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.490312965722802e-4
allele num: 26840
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.09e-2

QD
type: SiteQuality
SIO_000300: 8.85e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.161e0

FS
type: SiteQuality
SIO_000300: 8.464e0

VQSLOD
type: SiteQuality
SIO_000300: -3.207e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

DP
type: SiteQuality
SIO_000300: 8.05974e5

GenotypeQuality
all individuals: 727
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1622
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28001
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1454
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 413
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2117
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.985002205558006e-3
allele num: 4534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3054
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4984
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 364
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.7e-2

FS
type: SiteQuality
SIO_000300: 7.0e-1

DP
type: SiteQuality
SIO_000300: 8.6194e5

MQRankSum
type: SiteQuality
SIO_000300: -5.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.246e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

QD
type: SiteQuality
SIO_000300: 1.395e1

GenotypeQuality
all individuals: 763
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2322
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17034
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1061
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1477
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 336
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26486
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34134
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4840
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.776435045317221e-4
allele num: 5296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10780
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1622
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

DP
type: SiteQuality
SIO_000300: 8.96651e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.192e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 6.76e-1

GenotypeQuality
all individuals: 17034
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 499
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 391
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1600
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2905
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 833
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2322
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1061
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 321
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 6
allele frequency: 1.655629139072848e-3
allele num: 3624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 3.021148036253776e-3
allele num: 5296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 8.788890841975742e-5
allele num: 34134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1622
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

FS
type: SiteQuality
SIO_000300: 6.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

DP
type: SiteQuality
SIO_000300: 8.96651e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.192e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.46e-1

GenotypeQuality
all individuals: 560
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1534
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25074
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1458
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2590
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2559
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1022
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18366
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 8.25e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.420135527589545e-4
allele num: 4132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1858
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.0e-1

DP
type: SiteQuality
SIO_000300: 9.265e5

VQSLOD
type: SiteQuality
SIO_000300: -2.945e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.33e-1

QD
type: SiteQuality
SIO_000300: 3.45e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 608
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
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variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1232
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21888
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variant carriers: 0

GenotypeQuality
all individuals: 1528
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1470
bin: 9.75e1
variant carriers: 5

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 474
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 4.269854824935952e-4
allele num: 11710
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.32e-1

FS
type: SiteQuality
SIO_000300: 3.45e0

MQ
type: SiteQuality
SIO_000300: 5.906e1

DP
type: SiteQuality
SIO_000300: 1.011453e6

VQSLOD
type: SiteQuality
SIO_000300: -1.5e-1

QD
type: SiteQuality
SIO_000300: 9.43e0

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

GenotypeQuality
all individuals: 1280
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24497
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3152
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 876
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1088
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 616
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1419
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1506
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6210
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 2.125721226844823e-3
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12084
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45940
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 1.275e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 5.669999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

DP
type: SiteQuality
SIO_000300: 1.059977e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 3401
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
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variant carriers: 0

GenotypeQuality
all individuals: 16051
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
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GenotypeQuality
all individuals: 1378
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
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variant carriers: 0

GenotypeQuality
all individuals: 668
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GenotypeQuality
all individuals: 1392
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GenotypeQuality
all individuals: 381
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variant carriers: 0

GenotypeQuality
all individuals: 440
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variant carriers: 0

GenotypeQuality
all individuals: 408
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variant carriers: 0

GenotypeQuality
all individuals: 27795
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7064
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7536
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.4e0

MQ
type: SiteQuality
SIO_000300: 5.739e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.159e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.114916e6

VQSLOD
type: SiteQuality
SIO_000300: -1.853e0

GenotypeQuality
all individuals: 119
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1847
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14275
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1418
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1228
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3536
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27516
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.924112983914415e-5
allele num: 51972
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6860
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8166
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7334
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3340
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.089e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.031e-1

MQRankSum
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DP
type: SiteQuality
SIO_000300: 1.142323e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.889e0

MQ
type: SiteQuality
SIO_000300: 5.935e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8192
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12954
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6880
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.91717791411043e-5
allele num: 52160
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.143742e6

MQRankSum
type: SiteQuality
SIO_000300: 4.24e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

FS
type: SiteQuality
SIO_000300: 1.115e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.22e-1

GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.834355828220859e-5
allele num: 52160
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8192
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7364
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6880
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 4.631773969430292e-4
allele num: 12954
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.33e0

MQRankSum
type: SiteQuality
SIO_000300: 4.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQ
type: SiteQuality
SIO_000300: 5.966e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.398e0

FS
type: SiteQuality
SIO_000300: 1.115e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.22e-1

DP
type: SiteQuality
SIO_000300: 1.143742e6

VQSLOD
type: SiteQuality
SIO_000300: 4.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7368
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3402
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13022
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6944
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.906068923452272e-5
allele num: 52464
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.76e-1

DP
type: SiteQuality
SIO_000300: 1.146349e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.52e0

FS
type: SiteQuality
SIO_000300: 1.276e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.08e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.866159071399246e-5
allele num: 53586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7046
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.874e1

VQSLOD
type: SiteQuality
SIO_000300: -2.389e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.273e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.03e-1

FS
type: SiteQuality
SIO_000300: 9.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.850000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

QD
type: SiteQuality
SIO_000300: 1.136e1

DP
type: SiteQuality
SIO_000300: 1.138792e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.863377184809749e-5
allele num: 53666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7068
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13284
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.204e0

DP
type: SiteQuality
SIO_000300: 1.135232e6

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7052
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 53678
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8656
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3606
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -4.3e-3

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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DP
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele num: 13318
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7618
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 53772
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.383e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 7618
num of homozygotes: 0

Latino
type: Population
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allele frequency: 1.147578609134726e-4
allele num: 8714
num of homozygotes: 0

South Asian
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.857493127275429e-5
allele num: 53836
num of homozygotes: 0

East Asian
type: Population
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Other
type: Population
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1531
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 943
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1318
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1219
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2106
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7648
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.712365890782196e-5
allele num: 53874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8756
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13408
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.952e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-2

QD
type: SiteQuality
SIO_000300: 6.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e-1

FS
type: SiteQuality
SIO_000300: 8.72e-1

DP
type: SiteQuality
SIO_000300: 1.140436e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.615e-1

GenotypeQuality
all individuals: 1219
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3496
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3598
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 943
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1531
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10959
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2106
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4053
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1255
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7648
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.856182945391098e-5
allele num: 53874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.615e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-2

FS
type: SiteQuality
SIO_000300: 8.72e-1

DP
type: SiteQuality
SIO_000300: 1.140436e6

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 6.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

GenotypeQuality
all individuals: 4727
bin: 5.25e1
variant carriers: 4727

GenotypeQuality
all individuals: 2069
bin: 2.25e1
variant carriers: 2069

GenotypeQuality
all individuals: 2250
bin: 4.25e1
variant carriers: 2250

GenotypeQuality
all individuals: 4424
bin: 6.25e1
variant carriers: 4424

GenotypeQuality
all individuals: 1416
bin: 2.75e1
variant carriers: 1416

GenotypeQuality
all individuals: 335
bin: 7.5e0
variant carriers: 335

GenotypeQuality
all individuals: 3313
bin: 3.25e1
variant carriers: 3313

GenotypeQuality
all individuals: 2107
bin: 9.25e1
variant carriers: 2107

GenotypeQuality
all individuals: 4656
bin: 4.75e1
variant carriers: 4656

GenotypeQuality
all individuals: 3987
bin: 3.75e1
variant carriers: 3987

GenotypeQuality
all individuals: 3407
bin: 7.75e1
variant carriers: 3407

GenotypeQuality
all individuals: 13199
bin: 9.75e1
variant carriers: 13199

GenotypeQuality
all individuals: 2938
bin: 8.25e1
variant carriers: 2938

European (Non-Finnish)
type: Population
allele count: 60542
allele frequency: 1.0e0
allele num: 60542
num of homozygotes: 30271

East Asian
type: Population
allele count: 8100
allele frequency: 1.0e0
allele num: 8100
num of homozygotes: 4050

African
type: Population
allele count: 8936
allele frequency: 1.0e0
allele num: 8936
num of homozygotes: 4468

Other
type: Population
allele count: 754
allele frequency: 1.0e0
allele num: 754
num of homozygotes: 377

Latino
type: Population
allele count: 10564
allele frequency: 1.0e0
allele num: 10564
num of homozygotes: 5282

European (Finnish)
type: Population
allele count: 5150
allele frequency: 1.0e0
allele num: 5150
num of homozygotes: 2575

South Asian
type: Population
allele count: 15230
allele frequency: 1.0e0
allele num: 15230
num of homozygotes: 7615

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.53e-1

FS
type: SiteQuality
SIO_000300: 2.8456e1

MQRankSum
type: SiteQuality
SIO_000300: 4.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.32e-1

DP
type: SiteQuality
SIO_000300: 1.635031e6

VQSLOD
type: SiteQuality
SIO_000300: -3.508e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

QD
type: SiteQuality
SIO_000300: 3.454e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.13e-1

GenotypeQuality
all individuals: 606
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11960
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25971
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2700
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3848
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1177
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 337
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3295
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.886435331230284e-5
allele num: 12680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3150
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0