1-26608865-ACCGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608865
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608861
    reference: chr 1
allele count: 2
allele frequency: 5.941770647653e-5
allele num: 33660
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1618
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13257
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1418
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 2
  allele frequency: 3.862495171881035e-4
  allele num: 5178
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3138
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4576
  num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: ACCGG
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

1-26608865-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608865
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608865
    reference: chr 1
allele count: 1
allele frequency: 2.9708853238265e-5
allele num: 33660
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2553T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1389T>C
  hgvsp: ENST00000357089.4:c.1389T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2235T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1128T>C
  hgvsp: ENST00000314675.7:c.1128T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1488T>C
  hgvsp: ENST00000374222.1:c.1488T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2270T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.759T>C
  hgvsp: ENST00000374223.1:c.759T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1389T>C
  hgvsp: ENST00000374217.2:c.1389T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1488T>C
  hgvsp: ENST00000374221.3:c.1488T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2450T>C
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly496Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

1-26608865-ACCGGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608865
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608860
    reference: chr 1
allele count: 1
allele frequency: 2.9708853238265e-5
allele num: 33660
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1618
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13257
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3138
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 210
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5178
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4576
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: ACCGGG
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

1-26608865-ACCGGGACTGGGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608865
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608853
    reference: chr 1
allele count: 2
allele frequency: 5.941770647653e-5
allele num: 33660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsp: ENSP00000363339.1:p.Ser494_Pro497del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsp: ENSP00000324721.7:p.Ser374_Pro377del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsp: ENSP00000349601.4:p.Ser461_Pro464del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsp: ENSP00000363334.2:p.Ser461_Pro464del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsp: ENSP00000363338.3:p.Ser494_Pro497del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsp: ENSP00000363340.1:p.Ser251_Pro254del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser494_Pro497del
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: ACCGGGACTGGGG
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

1-26608866-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608866
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608866
    reference: chr 1
allele count: 6
allele frequency: 5.902026362384419e-4
allele num: 10166
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1487G>C
  hgvsp: ENSP00000363339.1:p.Gly496Ala
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1487G>C
  hgvsp: ENSP00000363338.3:p.Gly496Ala
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.758G>C
  hgvsp: ENSP00000363340.1:p.Gly253Ala
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1388G>C
  hgvsp: ENSP00000349601.4:p.Gly463Ala
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1388G>C
  hgvsp: ENSP00000363334.2:p.Gly463Ala
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1127G>C
  hgvsp: ENSP00000324721.7:p.Gly376Ala
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2552G>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2269G>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2234G>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2449G>C
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly496Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

1-26608866-CCGGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608866
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608862
    reference: chr 1
allele count: 60
allele frequency: 5.902026362384419e-3
allele num: 10166
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2548_2551delCCCG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1384_1387delCCCG
  hgvsp: ENSP00000363334.2:p.Pro462ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1384_1387delCCCG
  hgvsp: ENSP00000349601.4:p.Pro462ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1483_1486delCCCG
  hgvsp: ENSP00000363339.1:p.Pro495ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1123_1126delCCCG
  hgvsp: ENSP00000324721.7:p.Pro375ValfsTer67
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2265_2268delCCCG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.754_757delCCCG
  hgvsp: ENSP00000363340.1:p.Pro252ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1483_1486delCCCG
  hgvsp: ENSP00000363338.3:p.Pro495ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2230_2233delCCCG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2445_2448delCCCG
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro495ValfsTer?
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: CCGGG
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/1-26608867-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608867
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608867
    reference: chr 1
allele count: 139
allele frequency: 1.160460844882284e-2
allele num: 11978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2551G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1387G>T
  hgvsp: ENSP00000349601.4:p.Gly463Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1486G>T
  hgvsp: ENSP00000363339.1:p.Gly496Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1486G>T
  hgvsp: ENSP00000363338.3:p.Gly496Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1387G>T
  hgvsp: ENSP00000363334.2:p.Gly463Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2448G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.757G>T
  hgvsp: ENSP00000363340.1:p.Gly253Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1126G>T
  hgvsp: ENSP00000324721.7:p.Gly376Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2268G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2233G>T
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 3.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 7.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 2.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.75e1
  variant carriers: 2
hgvs: p.Gly496Cys
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

1-26608867-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608867
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608867
    reference: chr 1
allele count: 5
allele frequency: 4.174319585907497e-4
allele num: 11978
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2233G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1486G>A
  hgvsp: ENSP00000363338.3:p.Gly496Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1387G>A
  hgvsp: ENSP00000363334.2:p.Gly463Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.757G>A
  hgvsp: ENSP00000363340.1:p.Gly253Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1126G>A
  hgvsp: ENSP00000324721.7:p.Gly376Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1387G>A
  hgvsp: ENSP00000349601.4:p.Gly463Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1486G>A
  hgvsp: ENSP00000363339.1:p.Gly496Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2268G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2448G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2551G>A
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly496Ser
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

1-26608867-CGGGACT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608867
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608861
    reference: chr 1
allele count: 2
allele frequency: 1.669727834362999e-4
allele num: 11978
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.751_756delAGTCCC
  hgvsp: ENSP00000363340.1:p.Ser251_Pro252del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1120_1125delAGTCCC
  hgvsp: ENSP00000324721.7:p.Ser374_Pro375del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2227_2232delAGTCCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1381_1386delAGTCCC
  hgvsp: ENSP00000349601.4:p.Ser461_Pro462del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1480_1485delAGTCCC
  hgvsp: ENSP00000363339.1:p.Ser494_Pro495del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1480_1485delAGTCCC
  hgvsp: ENSP00000363338.3:p.Ser494_Pro495del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1381_1386delAGTCCC
  hgvsp: ENSP00000363334.2:p.Ser461_Pro462del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2262_2267delAGTCCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2442_2447delAGTCCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2545_2550delAGTCCC
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser494_Pro495del
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: CGGGACT
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

1-26608867-CGGGACTGGGGCCGGGACCGGGACCGGGACA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608867
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608837
    reference: chr 1
allele count: 15
allele frequency: 1.252295875772249e-3
allele num: 11978
alternate allele: C
canonical: false
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1683
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1643
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1183
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1122
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 8
  allele frequency: 3.207698476343224e-3
  allele num: 2494
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2062
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 7
  allele frequency: 2.255154639175258e-3
  allele num: 3104
  num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
reference allele: CGGGACTGGGGCCGGGACCGGGACCGGGACA
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-26608868-GGGACTGGGGCCGGGACCGGGACCGGGAC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608868
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608840
    reference: chr 1
allele count: 14442
allele frequency: 3.358760872598726e-1
allele num: 42998
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsp: ENSP00000324721.7:p.Cys366SerfsTer68
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsp: ENSP00000363334.2:p.Cys453SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsp: ENSP00000363340.1:p.Cys243SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsp: ENSP00000363338.3:p.Cys486SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsp: ENSP00000363339.1:p.Cys486SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsp: ENSP00000349601.4:p.Cys453SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 4.25e1
  variant carriers: 408
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 5.75e1
  variant carriers: 755
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 8.75e1
  variant carriers: 725
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 5.25e1
  variant carriers: 662
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.75e1
  variant carriers: 501
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 9.25e1
  variant carriers: 608
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 7.5e0
  variant carriers: 142
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 3.25e1
  variant carriers: 305
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 6.25e1
  variant carriers: 901
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 3.75e1
  variant carriers: 330
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 1.75e1
  variant carriers: 460
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.25e1
  variant carriers: 847
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 852
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 1.25e1
  variant carriers: 356
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 6.75e1
  variant carriers: 890
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 8.25e1
  variant carriers: 830
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 2.75e1
  variant carriers: 307
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 9.75e1
  variant carriers: 3279
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 2.25e1
  variant carriers: 419
genotype quality: GenotypeQuality
  all individuals: 1623
  bin: 2.5e0
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 2.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 5.25e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 6.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 7.25e1
  variant carriers: 36
hgvs: p.Cys486SerfsTer?
num of homozygotes: 1062
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: GGGACTGGGGCCGGGACCGGGACCGGGAC
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

1-26608868-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608868
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608868
    reference: chr 1
allele count: 1
allele frequency: 2.325689566956603e-5
allele num: 42998
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1485C>T
  hgvsp: ENST00000374222.1:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1386C>T
  hgvsp: ENST00000374217.2:c.1386C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.756C>T
  hgvsp: ENST00000374223.1:c.756C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1125C>T
  hgvsp: ENST00000314675.7:c.1125C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2232C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1386C>T
  hgvsp: ENST00000357089.4:c.1386C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1485C>T
  hgvsp: ENST00000374221.3:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2447C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2267C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2550C>T
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro495Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

1-26608870-GACTGGGGCCGGGACCGGGACCGGGAC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608870
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608844
    reference: chr 1
allele count: 2
allele frequency: 1.153668666359022e-4
allele num: 17336
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsp: ENSP00000363339.1:p.Cys486SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsp: ENSP00000324721.7:p.Cys366SerfsTer161
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsp: ENSP00000349601.4:p.Cys453SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsp: ENSP00000363340.1:p.Cys243SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsp: ENSP00000363334.2:p.Cys453SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsp: ENSP00000363338.3:p.Cys486SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Cys486SerfsTer?
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: GACTGGGGCCGGGACCGGGACCGGGAC
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

1-26608871-ACT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608871
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608869
    reference: chr 1
allele count: 182
allele frequency: 1.053240740740741e-2
allele num: 17280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2262_2263delAG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1381_1382delAG
  hgvsp: ENSP00000349601.4:p.Pro462ArgfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1120_1121delAG
  hgvsp: ENSP00000324721.7:p.Pro375ArgfsTer160
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1381_1382delAG
  hgvsp: ENSP00000363334.2:p.Pro462ArgfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2545_2546delAG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1480_1481delAG
  hgvsp: ENSP00000363339.1:p.Pro495ArgfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.751_752delAG
  hgvsp: ENSP00000363340.1:p.Pro252ArgfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2227_2228delAG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1480_1481delAG
  hgvsp: ENSP00000363338.3:p.Pro495ArgfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2442_2443delAG
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 2.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 5.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro495ArgfsTer?
num of homozygotes: 5
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: ACT
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

1-26608871-ACTGGGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608871
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608865
    reference: chr 1
allele count: 2
allele frequency: 1.157407407407407e-4
allele num: 17280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1476_1481delCCCCAG
  hgvsp: ENSP00000363338.3:p.Ser494_Pro495del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2438_2443delCCCCAG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.747_752delCCCCAG
  hgvsp: ENSP00000363340.1:p.Ser251_Pro252del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1377_1382delCCCCAG
  hgvsp: ENSP00000349601.4:p.Ser461_Pro462del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1116_1121delCCCCAG
  hgvsp: ENSP00000324721.7:p.Ser374_Pro375del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1377_1382delCCCCAG
  hgvsp: ENSP00000363334.2:p.Ser461_Pro462del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1476_1481delCCCCAG
  hgvsp: ENSP00000363339.1:p.Ser494_Pro495del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2541_2546delCCCCAG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2223_2228delCCCCAG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2258_2263delCCCCAG
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser494_Pro495del
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: ACTGGGG
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

1-26608871-ACTGGGGCCGGGACC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608871
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608857
    reference: chr 1
allele count: 56
allele frequency: 3.240740740740741e-3
allele num: 17280
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 9.75e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2860
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3108
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 5
  allele frequency: 5.89622641509434e-3
  allele num: 848
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 50
  allele frequency: 8.355614973262033e-3
  allele num: 5984
  num of homozygotes: 0
population: African
population: Latino
population: Other
reference allele: ACTGGGGCCGGGACC
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

1-26608871-ACTGGGGCCGGGACCGGGACC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608871
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608851
    reference: chr 1
allele count: 7
allele frequency: 4.050925925925926e-4
allele num: 17280
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1804
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5984
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 102
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2860
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
reference allele: ACTGGGGCCGGGACCGGGACC
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

1-26608871-ACTGGGGCCGGGACCGGGACCGGGAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608871
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608846
    reference: chr 1
allele count: 1
allele frequency: 5.787037037037037e-5
allele num: 17280
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1804
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.671122994652406e-4
  allele num: 5984
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 102
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 848
  num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
reference allele: ACTGGGGCCGGGACCGGGACCGGGAC
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-26608872-CTGGGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608872
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608867
    reference: chr 1
allele count: 3
allele frequency: 1.725724804417855e-4
allele num: 17384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1377_1381delCCCCA
  hgvsp: ENSP00000363334.2:p.Pro460SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1377_1381delCCCCA
  hgvsp: ENSP00000349601.4:p.Pro460SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2258_2262delCCCCA
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2223_2227delCCCCA
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1476_1480delCCCCA
  hgvsp: ENSP00000363339.1:p.Pro493SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2438_2442delCCCCA
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1476_1480delCCCCA
  hgvsp: ENSP00000363338.3:p.Pro493SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.747_751delCCCCA
  hgvsp: ENSP00000363340.1:p.Pro250SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2541_2545delCCCCA
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1116_1120delCCCCA
  hgvsp: ENSP00000324721.7:p.Pro373SerfsTer161
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro493SerfsTer?
num of homozygotes: 1
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: CTGGGG
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

1-26608873-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608873
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608873
    reference: chr 1
allele count: 4
allele frequency: 4.274417610600556e-4
allele num: 9358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2262A>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1480A>T
  hgvsp: ENSP00000363338.3:p.Ser494Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1120A>T
  hgvsp: ENSP00000324721.7:p.Ser374Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2545A>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1381A>T
  hgvsp: ENSP00000349601.4:p.Ser461Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1381A>T
  hgvsp: ENSP00000363334.2:p.Ser461Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.751A>T
  hgvsp: ENSP00000363340.1:p.Ser251Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2442A>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1480A>T
  hgvsp: ENSP00000363339.1:p.Ser494Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2227A>T
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser494Cys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

1-26608873-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608873
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608873
    reference: chr 1
allele count: 66
allele frequency: 7.052789057490917e-3
allele num: 9358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1480A>G
  hgvsp: ENSP00000363338.3:p.Ser494Gly
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1480A>G
  hgvsp: ENSP00000363339.1:p.Ser494Gly
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1381A>G
  hgvsp: ENSP00000363334.2:p.Ser461Gly
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1120A>G
  hgvsp: ENSP00000324721.7:p.Ser374Gly
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.751A>G
  hgvsp: ENSP00000363340.1:p.Ser251Gly
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2227A>G
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2262A>G
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2442A>G
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2545A>G
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1381A>G
  hgvsp: ENSP00000349601.4:p.Ser461Gly
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser494Gly
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

1-26608873-T-TGGGGCCGGGACCGGGACCGGGACA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608873
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608897
    reference: chr 1
allele count: 2
allele frequency: 2.137208805300278e-4
allele num: 9358
alternate allele: TGGGGCCGGGACCGGGACCGGGACA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsp: ENSP00000363340.1:p.Cys243_Pro250dup
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsp: ENSP00000324721.7:p.Cys366_Pro373dup
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsp: ENSP00000349601.4:p.Cys453_Pro460dup
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsp: ENSP00000363334.2:p.Cys453_Pro460dup
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsp: ENSP00000363338.3:p.Cys486_Pro493dup
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsp: ENSP00000363339.1:p.Cys486_Pro493dup
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5204
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys486_Pro493dup
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD

1-26608873-TGGGGCCGGGACCGGGACC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608873
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608855
    reference: chr 1
allele count: 5
allele frequency: 5.343022013250694e-4
allele num: 9358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsp: ENSP00000363340.1:p.Gly245_Pro250del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsp: ENSP00000363338.3:p.Gly488_Pro493del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsp: ENSP00000363334.2:p.Gly455_Pro460del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsp: ENSP00000363339.1:p.Gly488_Pro493del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsp: ENSP00000324721.7:p.Gly368_Pro373del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsp: ENSP00000349601.4:p.Gly455_Pro460del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1556
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5204
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly488_Pro493del
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: TGGGGCCGGGACCGGGACC
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

1-26608874-GGGGC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608874
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608870
    reference: chr 1
allele count: 1
allele frequency: 6.043756799226399e-5
allele num: 16546
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1475_1478delGCCC
  hgvsp: ENSP00000363338.3:p.Gly492AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1376_1379delGCCC
  hgvsp: ENSP00000349601.4:p.Gly459AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1376_1379delGCCC
  hgvsp: ENSP00000363334.2:p.Gly459AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.746_749delGCCC
  hgvsp: ENSP00000363340.1:p.Gly249AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2257_2260delGCCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2222_2225delGCCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1475_1478delGCCC
  hgvsp: ENSP00000363339.1:p.Gly492AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1115_1118delGCCC
  hgvsp: ENSP00000324721.7:p.Gly372AlafsTer70
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2540_2543delGCCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2437_2440delGCCC
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly492AlafsTer?
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: GGGGC
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

1-26608874-GGGGCCGGGACCGGGACCGGGAC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608874
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608852
    reference: chr 1
allele count: 160
allele frequency: 9.670010878762238e-3
allele num: 16546
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsp: ENSP00000363338.3:p.Cys486SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsp: ENSP00000324721.7:p.Cys366SerfsTer70
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsp: ENSP00000349601.4:p.Cys453SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsp: ENSP00000363339.1:p.Cys486SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsp: ENSP00000363340.1:p.Cys243SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsp: ENSP00000363334.2:p.Cys453SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 9.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 1.25e1
  variant carriers: 2
hgvs: p.Cys486SerfsTer?
num of homozygotes: 7
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: GGGGCCGGGACCGGGACCGGGAC
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

1-26608876-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608876
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608876
    reference: chr 1
allele count: 6
allele frequency: 2.647136680490603e-4
allele num: 22666
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1477C>T
  hgvsp: ENSP00000363338.3:p.Pro493Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1378C>T
  hgvsp: ENSP00000363334.2:p.Pro460Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2224C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2542C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2259C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1378C>T
  hgvsp: ENSP00000349601.4:p.Pro460Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1117C>T
  hgvsp: ENSP00000324721.7:p.Pro373Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1477C>T
  hgvsp: ENSP00000363339.1:p.Pro493Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.748C>T
  hgvsp: ENSP00000363340.1:p.Pro250Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2439C>T
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro493Ser
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS

1-26608876-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608876
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608876
    reference: chr 1
allele count: 5
allele frequency: 2.205947233742169e-4
allele num: 22666
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2259C>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1477C>A
  hgvsp: ENSP00000363338.3:p.Pro493Thr
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2439C>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.748C>A
  hgvsp: ENSP00000363340.1:p.Pro250Thr
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1117C>A
  hgvsp: ENSP00000324721.7:p.Pro373Thr
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1378C>A
  hgvsp: ENSP00000349601.4:p.Pro460Thr
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1477C>A
  hgvsp: ENSP00000363339.1:p.Pro493Thr
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2224C>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2542C>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1378C>A
  hgvsp: ENSP00000363334.2:p.Pro460Thr
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2035
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro493Thr
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

1-26608877-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608877
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608877
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 33832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2223C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1377C>T
  hgvsp: ENST00000374217.2:c.1377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1116C>T
  hgvsp: ENST00000314675.7:c.1116C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1476C>T
  hgvsp: ENST00000374221.3:c.1476C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1377C>T
  hgvsp: ENST00000357089.4:c.1377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2258C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1476C>T
  hgvsp: ENST00000374222.1:c.1476C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2438C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.747C>T
  hgvsp: ENST00000374223.1:c.747C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2541C>T
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10330
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 1.25e1
  variant carriers: 1
hgvs: p.Gly492Gly
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

1-26608877-G-GCCGGGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608877
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608883
    reference: chr 1
allele count: 4
allele frequency: 1.182312603452353e-4
allele num: 33832
alternate allele: GCCGGGA
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1110_1115dupTCCCGG
  hgvsp: ENSP00000324721.7:p.Pro371_Gly372dup
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1470_1475dupTCCCGG
  hgvsp: ENSP00000363339.1:p.Pro491_Gly492dup
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2432_2437dupTCCCGG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2535_2540dupTCCCGG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.741_746dupTCCCGG
  hgvsp: ENSP00000363340.1:p.Pro248_Gly249dup
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1371_1376dupTCCCGG
  hgvsp: ENSP00000349601.4:p.Pro458_Gly459dup
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1371_1376dupTCCCGG
  hgvsp: ENSP00000363334.2:p.Pro458_Gly459dup
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1470_1475dupTCCCGG
  hgvsp: ENSP00000363338.3:p.Pro491_Gly492dup
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2252_2257dupTCCCGG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2217_2222dupTCCCGG
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1682
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro491_Gly492dup
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

1-26608877-GCCGGGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608877
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608871
    reference: chr 1
allele count: 11305
allele frequency: 3.341510995507212e-1
allele num: 33832
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2252_2257delTCCCGG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1470_1475delTCCCGG
  hgvsp: ENSP00000363339.1:p.Gly492_Pro493del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2432_2437delTCCCGG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1470_1475delTCCCGG
  hgvsp: ENSP00000363338.3:p.Gly492_Pro493del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1371_1376delTCCCGG
  hgvsp: ENSP00000349601.4:p.Gly459_Pro460del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1110_1115delTCCCGG
  hgvsp: ENSP00000324721.7:p.Gly372_Pro373del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1371_1376delTCCCGG
  hgvsp: ENSP00000363334.2:p.Gly459_Pro460del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2217_2222delTCCCGG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2535_2540delTCCCGG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.741_746delTCCCGG
  hgvsp: ENSP00000363340.1:p.Gly249_Pro250del
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 2.25e1
  variant carriers: 789
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 7.5e0
  variant carriers: 999
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 4.25e1
  variant carriers: 989
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 6.75e1
  variant carriers: 404
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 5.25e1
  variant carriers: 738
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 288
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 2.75e1
  variant carriers: 782
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 1.25e1
  variant carriers: 1164
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 6.25e1
  variant carriers: 567
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 3.25e1
  variant carriers: 922
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 2.5e0
  variant carriers: 353
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.25e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 1017
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 1.75e1
  variant carriers: 963
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.75e1
  variant carriers: 856
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 324
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.75e1
  variant carriers: 696
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 250
genotype quality: GenotypeQuality
  all individuals: 10330
  bin: 9.75e1
  variant carriers: 9548
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 2.25e1
  variant carriers: 151
hgvs: p.Gly492_Pro493del
num of homozygotes: 479
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: GCCGGGA
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

1-26608877-GCCGGGACCGGGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608877
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608865
    reference: chr 1
allele count: 1
allele frequency: 2.955781508630882e-5
allele num: 33832
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsp: ENSP00000363340.1:p.Gly247_Pro250del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsp: ENSP00000363339.1:p.Gly490_Pro493del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsp: ENSP00000363338.3:p.Gly490_Pro493del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsp: ENSP00000349601.4:p.Gly457_Pro460del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsp: ENSP00000363334.2:p.Gly457_Pro460del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsp: ENSP00000324721.7:p.Gly370_Pro373del
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1682
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly490_Pro493del
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: GCCGGGACCGGGA
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/1-26608878-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608878
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608878
    reference: chr 1
allele count: 1
allele frequency: 8.744316194473592e-5
allele num: 11436
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1376G>T
  hgvsp: ENSP00000363334.2:p.Gly459Val
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1115G>T
  hgvsp: ENSP00000324721.7:p.Gly372Val
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1475G>T
  hgvsp: ENSP00000363338.3:p.Gly492Val
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1376G>T
  hgvsp: ENSP00000349601.4:p.Gly459Val
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2540G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2222G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2437G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1475G>T
  hgvsp: ENSP00000363339.1:p.Gly492Val
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2257G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.746G>T
  hgvsp: ENSP00000363340.1:p.Gly249Val
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gly492Val
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

1-26608878-CCGGGACCGGGACCGGGACA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608878
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608859
    reference: chr 1
allele count: 3
allele frequency: 2.623294858342078e-4
allele num: 11436
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsp: ENSP00000363338.3:p.Cys486AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsp: ENSP00000363339.1:p.Cys486AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsp: ENSP00000324721.7:p.Cys366AlafsTer71
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsp: ENSP00000349601.4:p.Cys453AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsp: ENSP00000363340.1:p.Cys243AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsp: ENSP00000363334.2:p.Cys453AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Cys486AlafsTer?
num of homozygotes: 1
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: CCGGGACCGGGACCGGGACA
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/1-26608879-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608879
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608879
    reference: chr 1
allele count: 1
allele frequency: 9.733307377846993e-5
allele num: 10274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1375G>T
  hgvsp: ENSP00000363334.2:p.Gly459Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2256G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2539G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1474G>T
  hgvsp: ENSP00000363339.1:p.Gly492Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.745G>T
  hgvsp: ENSP00000363340.1:p.Gly249Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2221G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1474G>T
  hgvsp: ENSP00000363338.3:p.Gly492Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1114G>T
  hgvsp: ENSP00000324721.7:p.Gly372Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1375G>T
  hgvsp: ENSP00000349601.4:p.Gly459Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2436G>T
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly492Cys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

1-26608879-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608879
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608879
    reference: chr 1
allele count: 2
allele frequency: 1.946661475569399e-4
allele num: 10274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.745G>A
  hgvsp: ENSP00000363340.1:p.Gly249Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1375G>A
  hgvsp: ENSP00000363334.2:p.Gly459Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1474G>A
  hgvsp: ENSP00000363338.3:p.Gly492Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1474G>A
  hgvsp: ENSP00000363339.1:p.Gly492Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2256G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2436G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1375G>A
  hgvsp: ENSP00000349601.4:p.Gly459Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2221G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1114G>A
  hgvsp: ENSP00000324721.7:p.Gly372Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2539G>A
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly492Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

1-26608879-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608879
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608878
    reference: chr 1
allele count: 2
allele frequency: 1.946661475569399e-4
allele num: 10274
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2255delC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1473delC
  hgvsp: ENSP00000363338.3:p.Gly492AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2435delC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1374delC
  hgvsp: ENSP00000363334.2:p.Gly459AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.744delC
  hgvsp: ENSP00000363340.1:p.Gly249AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1473delC
  hgvsp: ENSP00000363339.1:p.Gly492AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1374delC
  hgvsp: ENSP00000349601.4:p.Gly459AlafsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2538delC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2220delC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1113delC
  hgvsp: ENSP00000324721.7:p.Gly372AlafsTer71
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly492AlafsTer?
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: CG
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-26608879-CGGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608879
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608876
    reference: chr 1
allele count: 2
allele frequency: 1.946661475569399e-4
allele num: 10274
alternate allele: C
canonical: false
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 4.401408450704225e-4
  allele num: 2272
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 742
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 344
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2114
  num of homozygotes: 0
population: East Asian
population: Other
population: Latino
reference allele: CGGG
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

1-26608880-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608880
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608880
    reference: chr 1
allele count: 3
allele frequency: 2.520161290322581e-4
allele num: 11904
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2220C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2255C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1374C>T
  hgvsp: ENST00000374217.2:c.1374C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1473C>T
  hgvsp: ENST00000374222.1:c.1473C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1374C>T
  hgvsp: ENST00000357089.4:c.1374C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.744C>T
  hgvsp: ENST00000374223.1:c.744C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2538C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1473C>T
  hgvsp: ENST00000374221.3:c.1473C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2435C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1113C>T
  hgvsp: ENST00000314675.7:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro491Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

1-26608880-G-GGGACCGGGACCGGGACTGGGGCCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608880
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608904
    reference: chr 1
allele count: 1
allele frequency: 8.400537634408603e-5
allele num: 11904
alternate allele: GGGACCGGGACCGGGACTGGGGCCA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1748
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

1-26608880-GGGACCGGGACCGGGACAGGGACCA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608880
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608856
    reference: chr 1
allele count: 1
allele frequency: 8.400537634408603e-5
allele num: 11904
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsp: ENSP00000324721.7:p.Cys366_Pro373del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsp: ENSP00000363334.2:p.Cys453_Pro460del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsp: ENSP00000363339.1:p.Cys486_Pro493del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsp: ENSP00000363340.1:p.Cys243_Pro250del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsp: ENSP00000363338.3:p.Cys486_Pro493del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsp: ENSP00000349601.4:p.Cys453_Pro460del
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Cys486_Pro493del
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: GGGACCGGGACCGGGACAGGGACCA
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-26608881-GGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608881
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608879
    reference: chr 1
allele count: 1
allele frequency: 7.930214115781126e-5
allele num: 12610
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1371_1372delTC
  hgvsp: ENSP00000349601.4:p.Pro458ArgfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1371_1372delTC
  hgvsp: ENSP00000363334.2:p.Pro458ArgfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1470_1471delTC
  hgvsp: ENSP00000363338.3:p.Pro491ArgfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2432_2433delTC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1110_1111delTC
  hgvsp: ENSP00000324721.7:p.Pro371ArgfsTer164
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1470_1471delTC
  hgvsp: ENSP00000363339.1:p.Pro491ArgfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2252_2253delTC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2217_2218delTC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.741_742delTC
  hgvsp: ENSP00000363340.1:p.Pro248ArgfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2535_2536delTC
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro491ArgfsTer?
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: GGA
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

1-26608883-A-ACCGGGACCGGGACAGGGACTGGGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608883
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608907
    reference: chr 1
allele count: 143
allele frequency: 1.059887340646309e-2
allele num: 13492
alternate allele: ACCGGGACCGGGACAGGGACTGGGG
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 1.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 7.5e0
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 2.5e0
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 1.25e1
  variant carriers: 80
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 9.75e1
  variant carriers: 175
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 6.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 7.5e0
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 2.5e0
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 6.25e1
  variant carriers: 8
num of homozygotes: 9
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

1-26608883-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608883
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608883
    reference: chr 1
allele count: 6
allele frequency: 4.447079750963534e-4
allele num: 13492
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2432T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.741T>C
  hgvsp: ENST00000374223.1:c.741T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2217T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1470T>C
  hgvsp: ENST00000374222.1:c.1470T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1110T>C
  hgvsp: ENST00000314675.7:c.1110T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1470T>C
  hgvsp: ENST00000374221.3:c.1470T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1371T>C
  hgvsp: ENST00000357089.4:c.1371T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2535T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2252T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1371T>C
  hgvsp: ENST00000374217.2:c.1371T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 2.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 7.5e0
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 1.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly490Gly
num of homozygotes: 1
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

1-26608883-ACCG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608883
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608880
    reference: chr 1
allele count: 2
allele frequency: 1.482359916987845e-4
allele num: 13492
alternate allele: A
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 2.5e0
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 494
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2206
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2822
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.630194634402946e-4
  allele num: 3802
  num of homozygotes: 0
population: South Asian
population: Other
population: African
reference allele: ACCG
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-26608883-ACCGGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608883
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608878
    reference: chr 1
allele count: 2
allele frequency: 1.482359916987845e-4
allele num: 13492
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1465_1469delCCCGG
  hgvsp: ENSP00000363339.1:p.Pro489SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1465_1469delCCCGG
  hgvsp: ENSP00000363338.3:p.Pro489SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2212_2216delCCCGG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1366_1370delCCCGG
  hgvsp: ENSP00000363334.2:p.Pro456SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1105_1109delCCCGG
  hgvsp: ENSP00000324721.7:p.Pro369SerfsTer165
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2530_2534delCCCGG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2427_2431delCCCGG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1366_1370delCCCGG
  hgvsp: ENSP00000349601.4:p.Pro456SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2247_2251delCCCGG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.736_740delCCCGG
  hgvsp: ENSP00000363340.1:p.Pro246SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro489SerfsTer?
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: ACCGGG
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS

1-26608884-CCGGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608884
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608880
    reference: chr 1
allele count: 1
allele frequency: 7.647598654022637e-5
allele num: 13076
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.736_739delCCCG
  hgvsp: ENSP00000363340.1:p.Pro246ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1465_1468delCCCG
  hgvsp: ENSP00000363338.3:p.Pro489ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1105_1108delCCCG
  hgvsp: ENSP00000324721.7:p.Pro369ValfsTer73
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1366_1369delCCCG
  hgvsp: ENSP00000363334.2:p.Pro456ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2530_2533delCCCG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2247_2250delCCCG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1465_1468delCCCG
  hgvsp: ENSP00000363339.1:p.Pro489ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2212_2215delCCCG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2427_2430delCCCG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1366_1369delCCCG
  hgvsp: ENSP00000349601.4:p.Pro456ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro489ValfsTer?
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: CCGGG
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-26608885-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608885
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608885
    reference: chr 1
allele count: 4
allele frequency: 2.289901534234028e-4
allele num: 17468
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1468G>T
  hgvsp: ENSP00000363338.3:p.Gly490Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2533G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2215G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1108G>T
  hgvsp: ENSP00000324721.7:p.Gly370Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1369G>T
  hgvsp: ENSP00000349601.4:p.Gly457Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1468G>T
  hgvsp: ENSP00000363339.1:p.Gly490Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1369G>T
  hgvsp: ENSP00000363334.2:p.Gly457Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2250G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2430G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.739G>T
  hgvsp: ENSP00000363340.1:p.Gly247Cys
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly490Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-26608885-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608885
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608885
    reference: chr 1
allele count: 5
allele frequency: 2.862376917792535e-4
allele num: 17468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1369G>A
  hgvsp: ENSP00000363334.2:p.Gly457Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1468G>A
  hgvsp: ENSP00000363339.1:p.Gly490Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2533G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2430G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1369G>A
  hgvsp: ENSP00000349601.4:p.Gly457Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1468G>A
  hgvsp: ENSP00000363338.3:p.Gly490Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.739G>A
  hgvsp: ENSP00000363340.1:p.Gly247Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1108G>A
  hgvsp: ENSP00000324721.7:p.Gly370Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2215G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2250G>A
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly490Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-26608885-CGGGA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608885
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608881
    reference: chr 1
allele count: 15
allele frequency: 8.587130753377604e-4
allele num: 17468
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.735_738delTCCC
  hgvsp: ENSP00000363340.1:p.Pro246ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2529_2532delTCCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1464_1467delTCCC
  hgvsp: ENSP00000363338.3:p.Pro489ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1365_1368delTCCC
  hgvsp: ENSP00000363334.2:p.Pro456ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1104_1107delTCCC
  hgvsp: ENSP00000324721.7:p.Pro369ValfsTer73
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1365_1368delTCCC
  hgvsp: ENSP00000349601.4:p.Pro456ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2426_2429delTCCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1464_1467delTCCC
  hgvsp: ENSP00000363339.1:p.Pro489ValfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2246_2249delTCCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2211_2214delTCCC
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1296
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1961
  bin: 9.75e1
  variant carriers: 11
hgvs: p.Pro489ValfsTer?
num of homozygotes: 1
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: CGGGA
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-26608885-CGGGACCGGGACA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608885
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608873
    reference: chr 1
allele count: 1
allele frequency: 5.72475383558507e-5
allele num: 17468
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsp: ENSP00000363339.1:p.Cys486_Pro489del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsp: ENSP00000363334.2:p.Cys453_Pro456del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsp: ENSP00000349601.4:p.Cys453_Pro456del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsp: ENSP00000363340.1:p.Cys243_Pro246del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsp: ENSP00000363338.3:p.Cys486_Pro489del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsp: ENSP00000324721.7:p.Cys366_Pro369del
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3928
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Cys486_Pro489del
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: CGGGACCGGGACA
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/1-26608889-ACC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608889
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608887
    reference: chr 1
allele count: 34
allele frequency: 1.706998694648057e-3
allele num: 19918
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.733_734delGG
  hgvsp: ENSP00000363340.1:p.Gly245SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2424_2425delGG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1363_1364delGG
  hgvsp: ENSP00000363334.2:p.Gly455SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1363_1364delGG
  hgvsp: ENSP00000349601.4:p.Gly455SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1102_1103delGG
  hgvsp: ENSP00000324721.7:p.Gly368SerfsTer167
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1462_1463delGG
  hgvsp: ENSP00000363338.3:p.Gly488SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2527_2528delGG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1462_1463delGG
  hgvsp: ENSP00000363339.1:p.Gly488SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2209_2210delGG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2244_2245delGG
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly488SerfsTer?
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: ACC
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

1-26608890-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608890
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608890
    reference: chr 1
allele count: 1
allele frequency: 1.155214638879904e-5
allele num: 86564
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2210G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1463G>A
  hgvsp: ENSP00000363339.1:p.Gly488Asp
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1103G>A
  hgvsp: ENSP00000324721.7:p.Gly368Asp
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1463G>A
  hgvsp: ENSP00000363338.3:p.Gly488Asp
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2245G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.734G>A
  hgvsp: ENSP00000363340.1:p.Gly245Asp
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2528G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2425G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1364G>A
  hgvsp: ENSP00000363334.2:p.Gly455Asp
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1364G>A
  hgvsp: ENSP00000349601.4:p.Gly455Asp
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5323
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly488Asp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

1-26608890-CCG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608890
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608888
    reference: chr 1
allele count: 15
allele frequency: 1.732821958319856e-4
allele num: 86564
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1461_1462delCG
  hgvsp: ENSP00000363339.1:p.Gly488SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2208_2209delCG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1362_1363delCG
  hgvsp: ENSP00000363334.2:p.Gly455SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1101_1102delCG
  hgvsp: ENSP00000324721.7:p.Gly368SerfsTer167
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1461_1462delCG
  hgvsp: ENSP00000363338.3:p.Gly488SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.732_733delCG
  hgvsp: ENSP00000363340.1:p.Gly245SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2423_2424delCG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1362_1363delCG
  hgvsp: ENSP00000349601.4:p.Gly455SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2243_2244delCG
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2526_2527delCG
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5323
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly488SerfsTer?
num of homozygotes: 1
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: CCG
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/1-26608891-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608891
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608891
    reference: chr 1
allele count: 7
allele frequency: 8.073631519457452e-5
allele num: 86702
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1102G>T
  hgvsp: ENSP00000324721.7:p.Gly368Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1363G>T
  hgvsp: ENSP00000349601.4:p.Gly455Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2424G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.733G>T
  hgvsp: ENSP00000363340.1:p.Gly245Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1462G>T
  hgvsp: ENSP00000363339.1:p.Gly488Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2209G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2527G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2244G>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1363G>T
  hgvsp: ENSP00000363334.2:p.Gly455Cys
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1462G>T
  hgvsp: ENSP00000363338.3:p.Gly488Cys
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3097
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5247
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly488Cys
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

1-26608891-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608891
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608891
    reference: chr 1
allele count: 3
allele frequency: 3.460127794053193e-5
allele num: 86702
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1363G>A
  hgvsp: ENSP00000363334.2:p.Gly455Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2527G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1462G>A
  hgvsp: ENSP00000363338.3:p.Gly488Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1102G>A
  hgvsp: ENSP00000324721.7:p.Gly368Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2244G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1462G>A
  hgvsp: ENSP00000363339.1:p.Gly488Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.733G>A
  hgvsp: ENSP00000363340.1:p.Gly245Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1363G>A
  hgvsp: ENSP00000349601.4:p.Gly455Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2209G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2424G>A
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3097
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5247
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly488Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum

1-26608892-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608892
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608892
    reference: chr 1
allele count: 73
allele frequency: 8.331431180095869e-4
allele num: 87620
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1461C>T
  hgvsp: ENST00000374222.1:c.1461C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1101C>T
  hgvsp: ENST00000314675.7:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1362C>T
  hgvsp: ENST00000357089.4:c.1362C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1461C>T
  hgvsp: ENST00000374221.3:c.1461C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2243C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2526C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2423C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2208C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1362C>T
  hgvsp: ENST00000374217.2:c.1362C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.732C>T
  hgvsp: ENST00000374223.1:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5264
  bin: 9.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1790
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro487Pro
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-26608892-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608892
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608892
    reference: chr 1
allele count: 1
allele frequency: 1.141291942478886e-5
allele num: 87620
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1461C>A
  hgvsp: ENST00000374222.1:c.1461C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1362C>A
  hgvsp: ENST00000357089.4:c.1362C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2526C>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2208C>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.732C>A
  hgvsp: ENST00000374223.1:c.732C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2423C>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1101C>A
  hgvsp: ENST00000314675.7:c.1101C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2243C>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1461C>A
  hgvsp: ENST00000374221.3:c.1461C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1362C>A
  hgvsp: ENST00000374217.2:c.1362C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5264
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro487Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD

1-26608892-GGGAC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608892
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608888
    reference: chr 1
allele count: 33
allele frequency: 3.766263410180324e-4
allele num: 87620
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2522_2525delGTCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1358_1361delGTCC
  hgvsp: ENSP00000363334.2:p.Cys453SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1457_1460delGTCC
  hgvsp: ENSP00000363338.3:p.Cys486SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1457_1460delGTCC
  hgvsp: ENSP00000363339.1:p.Cys486SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.728_731delGTCC
  hgvsp: ENSP00000363340.1:p.Cys243SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1097_1100delGTCC
  hgvsp: ENSP00000324721.7:p.Cys366SerfsTer76
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2204_2207delGTCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1358_1361delGTCC
  hgvsp: ENSP00000349601.4:p.Cys453SerfsTer?
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2419_2422delGTCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2239_2242delGTCC
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5264
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Cys486SerfsTer?
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: GGGAC
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

1-26608896-C-CAGGGACCGGGACTGGGGCCGGGACCGGGAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608896
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608926
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 86218
alternate allele: CAGGGACCGGGACTGGGGCCGGGACCGGGAG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: inframe insertion
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

1-26608896-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608896
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608896
    reference: chr 1
allele count: 563
allele frequency: 6.529958941288362e-3
allele num: 86218
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2419G>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1457G>C
  hgvsp: ENSP00000363339.1:p.Cys486Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2522G>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2239G>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1097G>C
  hgvsp: ENSP00000324721.7:p.Cys366Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.728G>C
  hgvsp: ENSP00000363340.1:p.Cys243Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1358G>C
  hgvsp: ENSP00000349601.4:p.Cys453Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1358G>C
  hgvsp: ENSP00000363334.2:p.Cys453Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1457G>C
  hgvsp: ENSP00000363338.3:p.Cys486Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2204G>C
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 3.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 7.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 1.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 2.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 5.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 4.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 9.75e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 2.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 5.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 6.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 3.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 1.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 4.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 9.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 7.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 8.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 6.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 8.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 3.25e1
  variant carriers: 2
hgvs: p.Cys486Ser
num of homozygotes: 22
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

1-26608897-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608897
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608897
    reference: chr 1
allele count: 2
allele frequency: 1.748802070581652e-5
allele num: 114364
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1357T>A
  hgvsp: ENSP00000349601.4:p.Cys453Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1456T>A
  hgvsp: ENSP00000363338.3:p.Cys486Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2521T>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.727T>A
  hgvsp: ENSP00000363340.1:p.Cys243Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2418T>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1456T>A
  hgvsp: ENSP00000363339.1:p.Cys486Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1357T>A
  hgvsp: ENSP00000363334.2:p.Cys453Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2203T>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1096T>A
  hgvsp: ENSP00000324721.7:p.Cys366Ser
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2238T>A
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7162
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5104
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Cys486Ser
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

1-26608897-AGGGACC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608897
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608891
    reference: chr 1
allele count: 1
allele frequency: 8.744010352908258e-6
allele num: 114364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2515_2520delGGTCCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.721_726delGGTCCC
  hgvsp: ENSP00000363340.1:p.Gly241_Pro242del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1351_1356delGGTCCC
  hgvsp: ENSP00000363334.2:p.Gly451_Pro452del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2232_2237delGGTCCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1351_1356delGGTCCC
  hgvsp: ENSP00000349601.4:p.Gly451_Pro452del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1450_1455delGGTCCC
  hgvsp: ENSP00000363338.3:p.Gly484_Pro485del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1450_1455delGGTCCC
  hgvsp: ENSP00000363339.1:p.Gly484_Pro485del
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2412_2417delGGTCCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2197_2202delGGTCCC
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1090_1095delGGTCCC
  hgvsp: ENSP00000324721.7:p.Gly364_Pro365del
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7162
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly484_Pro485del
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: AGGGACC
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

1-26608901-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608901
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608901
    reference: chr 1
allele count: 11
allele frequency: 9.459110843580704e-5
allele num: 116290
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1452T>C
  hgvsp: ENST00000374222.1:c.1452T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.723T>C
  hgvsp: ENST00000374223.1:c.723T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1353T>C
  hgvsp: ENST00000357089.4:c.1353T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2517T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1092T>C
  hgvsp: ENST00000314675.7:c.1092T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2199T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1452T>C
  hgvsp: ENST00000374221.3:c.1452T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2234T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1353T>C
  hgvsp: ENST00000374217.2:c.1353T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2414T>C
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4105
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5879
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly484Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-26608902-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608902
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608902
    reference: chr 1
allele count: 1
allele frequency: 8.562230289745873e-6
allele num: 116792
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.722G>A
  hgvsp: ENSP00000363340.1:p.Gly241Asp
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1091G>A
  hgvsp: ENSP00000324721.7:p.Gly364Asp
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1352G>A
  hgvsp: ENSP00000349601.4:p.Gly451Asp
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2516G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2413G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2198G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1451G>A
  hgvsp: ENSP00000363338.3:p.Gly484Asp
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1352G>A
  hgvsp: ENSP00000363334.2:p.Gly451Asp
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1451G>A
  hgvsp: ENSP00000363339.1:p.Gly484Asp
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2233G>A
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly484Asp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-26608904-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608904
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608904
    reference: chr 1
allele count: 12
allele frequency: 1.030361313367221e-4
allele num: 116464
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1449T>C
  hgvsp: ENST00000374221.3:c.1449T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.720T>C
  hgvsp: ENST00000374223.1:c.720T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1350T>C
  hgvsp: ENST00000374217.2:c.1350T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1350T>C
  hgvsp: ENST00000357089.4:c.1350T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2411T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1449T>C
  hgvsp: ENST00000374222.1:c.1449T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2196T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2514T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2231T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1089T>C
  hgvsp: ENST00000314675.7:c.1089T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3883
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4444
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3371
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7127
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro483Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-26608907-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608907
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608907
    reference: chr 1
allele count: 1
allele frequency: 8.543795495711015e-6
allele num: 117044
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1086T>G
  hgvsp: ENSP00000324721.7:p.Ser362Arg
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1446T>G
  hgvsp: ENSP00000363338.3:p.Ser482Arg
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1347T>G
  hgvsp: ENSP00000363334.2:p.Ser449Arg
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2228T>G
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.717T>G
  hgvsp: ENSP00000363340.1:p.Ser239Arg
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1347T>G
  hgvsp: ENSP00000349601.4:p.Ser449Arg
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2193T>G
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2408T>G
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1446T>G
  hgvsp: ENSP00000363339.1:p.Ser482Arg
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2511T>G
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser482Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS

1-26608907-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608907
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608907
    reference: chr 1
allele count: 1
allele frequency: 8.543795495711015e-6
allele num: 117044
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1347T>C
  hgvsp: ENST00000357089.4:c.1347T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2511T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1086T>C
  hgvsp: ENST00000314675.7:c.1086T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2408T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2193T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2228T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1446T>C
  hgvsp: ENST00000374221.3:c.1446T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1446T>C
  hgvsp: ENST00000374222.1:c.1446T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.717T>C
  hgvsp: ENST00000374223.1:c.717T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1347T>C
  hgvsp: ENST00000374217.2:c.1347T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser482Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

1-26608922-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608922
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608922
    reference: chr 1
allele count: 7
allele frequency: 5.955216769890424e-5
allele num: 117544
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1332C>T
  hgvsp: ENST00000357089.4:c.1332C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2213C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1431C>T
  hgvsp: ENST00000374222.1:c.1431C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1431C>T
  hgvsp: ENST00000374221.3:c.1431C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.702C>T
  hgvsp: ENST00000374223.1:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2393C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1071C>T
  hgvsp: ENST00000314675.7:c.1071C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1332C>T
  hgvsp: ENST00000374217.2:c.1332C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2178C>T
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2496C>T
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4444
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1867
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser477Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

1-26608924-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608924
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608924
    reference: chr 1
allele count: 1
allele frequency: 8.502533755059007e-6
allele num: 117612
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.700T>C
  hgvsp: ENSP00000363340.1:p.Ser234Pro
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2211T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1429T>C
  hgvsp: ENSP00000363339.1:p.Ser477Pro
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2391T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1429T>C
  hgvsp: ENSP00000363338.3:p.Ser477Pro
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1330T>C
  hgvsp: ENSP00000363334.2:p.Ser444Pro
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1330T>C
  hgvsp: ENSP00000349601.4:p.Ser444Pro
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2176T>C
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1069T>C
  hgvsp: ENSP00000324721.7:p.Ser357Pro
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2494T>C
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4444
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser477Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-26608928-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26608928
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 26608928
    reference: chr 1
allele count: 8
allele frequency: 6.842636467831055e-5
allele num: 116914
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000475591
  gene symbol: UBXN11
  hgvsc: ENST00000475591.1:n.2387G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363339
  ensembl transcript: ENST00000374222
  gene symbol: UBXN11
  hgvsc: ENST00000374222.1:c.1425G>A
  hgvsp: ENST00000374222.1:c.1425G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363338
  ensembl transcript: ENST00000374221
  gene symbol: UBXN11
  hgvsc: ENST00000374221.3:c.1425G>A
  hgvsp: ENST00000374221.3:c.1425G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000496466
  gene symbol: UBXN11
  hgvsc: ENST00000496466.1:n.2207G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363340
  ensembl transcript: ENST00000374223
  gene symbol: UBXN11
  hgvsc: ENST00000374223.1:c.696G>A
  hgvsp: ENST00000374223.1:c.696G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000324721
  ensembl transcript: ENST00000314675
  gene symbol: UBXN11
  hgvsc: ENST00000314675.7:c.1065G>A
  hgvsp: ENST00000314675.7:c.1065G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000494942
  gene symbol: UBXN11
  hgvsc: ENST00000494942.1:n.2172G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158062
  ensembl transcript: ENST00000472155
  gene symbol: UBXN11
  hgvsc: ENST00000472155.1:n.2490G>A
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000363334
  ensembl transcript: ENST00000374217
  gene symbol: UBXN11
  hgvsc: ENST00000374217.2:c.1326G>A
  hgvsp: ENST00000374217.2:c.1326G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158062
  ensembl protein: ENSP00000349601
  ensembl transcript: ENST00000357089
  gene symbol: UBXN11
  hgvsc: ENST00000357089.4:c.1326G>A
  hgvsp: ENST00000357089.4:c.1326G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30600
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro475Pro
num of homozygotes: 0
reference allele: C

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13556
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.192e0

DP
type: SiteQuality
SIO_000300: 6.02596e5

QD
type: SiteQuality
SIO_000300: 2.417e1

VQSLOD
type: SiteQuality
SIO_000300: 2.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.328e-1

MQ
type: SiteQuality
SIO_000300: 5.206e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13257
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 235
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1618
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1418
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.185314685314685e-4
allele num: 4576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5178
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.328e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.192e0

DP
type: SiteQuality
SIO_000300: 6.02596e5

QD
type: SiteQuality
SIO_000300: 2.417e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

MQ
type: SiteQuality
SIO_000300: 5.206e1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.376807317792859e-5
allele num: 13556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1418
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.328e-1

QD
type: SiteQuality
SIO_000300: 2.417e1

VQSLOD
type: SiteQuality
SIO_000300: 2.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

MQ
type: SiteQuality
SIO_000300: 5.206e1

MQRankSum
type: SiteQuality
SIO_000300: -2.192e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

DP
type: SiteQuality
SIO_000300: 6.02596e5

GenotypeQuality
all individuals: 269
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1618
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13257
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 165
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 7.052186177715092e-4
allele num: 1418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5178
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.790830945558739e-4
allele num: 5584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13556
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.328e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.206e1

MQRankSum
type: SiteQuality
SIO_000300: -2.192e0

DP
type: SiteQuality
SIO_000300: 6.02596e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

QD
type: SiteQuality
SIO_000300: 2.417e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.04e-1

GenotypeQuality
all individuals: 775
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 269
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1636
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1332
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 97
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 316
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 710
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 507
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 217
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 5.030181086519115e-4
allele num: 1988
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.373626373626374e-3
allele num: 2184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.084967320261438e-4
allele num: 2448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.645502645502645e-3
allele num: 378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.71e-2

DP
type: SiteQuality
SIO_000300: 1.89934e5

MQ
type: SiteQuality
SIO_000300: 5.142e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.78e-1

QD
type: SiteQuality
SIO_000300: 2.698e1

FS
type: SiteQuality
SIO_000300: 2.944e0

VQSLOD
type: SiteQuality
SIO_000300: 5.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.302e0

GenotypeQuality
all individuals: 316
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1332
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 9.75e1
variant carriers: 61

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1636
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 775
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 2.074688796680498e-3
allele num: 482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 48
allele frequency: 1.96078431372549e-2
allele num: 2448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1988
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 1.322751322751323e-2
allele num: 378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 2.747252747252747e-3
allele num: 2184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2648
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.78e-1

DP
type: SiteQuality
SIO_000300: 1.89934e5

ClippingRankSum
type: SiteQuality
SIO_000300: -6.28e-1

FS
type: SiteQuality
SIO_000300: 2.944e0

MQRankSum
type: SiteQuality
SIO_000300: -1.302e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.71e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

QD
type: SiteQuality
SIO_000300: 2.698e1

MQ
type: SiteQuality
SIO_000300: 5.142e1

GenotypeQuality
all individuals: 989
bin: 9.75e1
variant carriers: 140

GenotypeQuality
all individuals: 332
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 148
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 233
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 260
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 155
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 766
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1188
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 232
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1183
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 172
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 158
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 147
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1683
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 253
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 1.603849238171612e-3
allele num: 2494
num of homozygotes: 0

African
type: Population
allele count: 91
allele frequency: 8.110516934046345e-2
allele num: 1122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 5.47680412371134e-3
allele num: 3104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

Latino
type: Population
allele count: 26
allele frequency: 1.260911736178467e-2
allele num: 2062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.908396946564885e-3
allele num: 524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2598
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.437e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.45e-1

QD
type: SiteQuality
SIO_000300: 1.508e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

MQ
type: SiteQuality
SIO_000300: 4.294e1

MQRankSum
type: SiteQuality
SIO_000300: -4.01e-1

FS
type: SiteQuality
SIO_000300: 1.1491e1

VQSLOD
type: SiteQuality
SIO_000300: -4.103e-1

DP
type: SiteQuality
SIO_000300: 2.24191e5

GenotypeQuality
all individuals: 172
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1183
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 147
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1683
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.202886928628709e-3
allele num: 2494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.443298969072165e-4
allele num: 3104
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1122
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1491e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

QD
type: SiteQuality
SIO_000300: 1.508e1

MQ
type: SiteQuality
SIO_000300: 4.294e1

MQRankSum
type: SiteQuality
SIO_000300: -4.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.437e-1

DP
type: SiteQuality
SIO_000300: 2.24191e5

ClippingRankSum
type: SiteQuality
SIO_000300: -5.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.103e-1

GenotypeQuality
all individuals: 207
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1183
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1683
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 766
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 4.849660523763337e-4
allele num: 2062
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.221649484536082e-4
allele num: 3104
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.103e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.437e-1

FS
type: SiteQuality
SIO_000300: 1.1491e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

MQ
type: SiteQuality
SIO_000300: 4.294e1

MQRankSum
type: SiteQuality
SIO_000300: -4.01e-1

DP
type: SiteQuality
SIO_000300: 2.24191e5

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

QD
type: SiteQuality
SIO_000300: 1.508e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.45e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.24191e5

MQ
type: SiteQuality
SIO_000300: 4.294e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.437e-1

QD
type: SiteQuality
SIO_000300: 1.508e1

VQSLOD
type: SiteQuality
SIO_000300: -4.103e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.01e-1

FS
type: SiteQuality
SIO_000300: 1.1491e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.45e-1

GenotypeQuality
all individuals: 1518
bin: 7.5e0
variant carriers: 25

GenotypeQuality
all individuals: 520
bin: 7.75e1
variant carriers: 39

GenotypeQuality
all individuals: 439
bin: 3.25e1
variant carriers: 27

GenotypeQuality
all individuals: 1625
bin: 2.25e1
variant carriers: 25

GenotypeQuality
all individuals: 432
bin: 1.25e1
variant carriers: 15

GenotypeQuality
all individuals: 475
bin: 1.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1920
bin: 6.25e1
variant carriers: 41

GenotypeQuality
all individuals: 14347
bin: 9.75e1
variant carriers: 12971

GenotypeQuality
all individuals: 206
bin: 4.25e1
variant carriers: 45

GenotypeQuality
all individuals: 333
bin: 3.75e1
variant carriers: 46

GenotypeQuality
all individuals: 217
bin: 8.75e1
variant carriers: 38

GenotypeQuality
all individuals: 142
bin: 5.75e1
variant carriers: 36

GenotypeQuality
all individuals: 374
bin: 8.25e1
variant carriers: 37

GenotypeQuality
all individuals: 219
bin: 4.75e1
variant carriers: 42

GenotypeQuality
all individuals: 266
bin: 9.25e1
variant carriers: 33

European (Finnish)
type: Population
allele count: 620
allele frequency: 3.075396825396826e-1
allele num: 2016
num of homozygotes: 22

Latino
type: Population
allele count: 1778
allele frequency: 3.061294765840221e-1
allele num: 5808
num of homozygotes: 112

European (Non-Finnish)
type: Population
allele count: 6498
allele frequency: 3.6e-1
allele num: 18050
num of homozygotes: 348

African
type: Population
allele count: 1591
allele frequency: 3.761229314420804e-1
allele num: 4230
num of homozygotes: 159

South Asian
type: Population
allele count: 2763
allele frequency: 3.57069010080124e-1
allele num: 7738
num of homozygotes: 350

Other
type: Population
allele count: 121
allele frequency: 3.878205128205128e-1
allele num: 312
num of homozygotes: 11

East Asian
type: Population
allele count: 1071
allele frequency: 2.210982658959537e-1
allele num: 4844
num of homozygotes: 60

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.741e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.93e-1

FS
type: SiteQuality
SIO_000300: 6.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.09e-1

DP
type: SiteQuality
SIO_000300: 1.398222e6

MQRankSum
type: SiteQuality
SIO_000300: -1.231e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 5.45e1

QD
type: SiteQuality
SIO_000300: 1.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.0e-2

GenotypeQuality
all individuals: 1623
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1920
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14347
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.540166204986149e-5
allele num: 18050
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4230
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2016
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4844
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.741e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.231e0

FS
type: SiteQuality
SIO_000300: 6.94e-1

MQ
type: SiteQuality
SIO_000300: 5.45e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.0e-2

DP
type: SiteQuality
SIO_000300: 1.398222e6

QD
type: SiteQuality
SIO_000300: 1.11e0

GenotypeQuality
all individuals: 866
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1584
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 3222
num of homozygotes: 0

Latino
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allele frequency: 7.74593338497289e-4
allele num: 2582
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.4004e1

InbreedingCoeff
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SIO_000300: -1.78e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.74e-1

MQ
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SIO_000300: 5.494e1

MQRankSum
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BaseQRankSum
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SIO_000300: 7.4e-1

QD
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SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 4.0051e5

VQSLOD
type: SiteQuality
SIO_000300: -3.726e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2860
num of homozygotes: 0

European (Non-Finnish)
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allele count: 22
allele frequency: 3.676470588235294e-3
allele num: 5984
num of homozygotes: 0

African
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allele count: 146
allele frequency: 8.093126385809313e-2
allele num: 1804
num of homozygotes: 5

European (Finnish)
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allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 5.050505050505051e-3
allele num: 2574
num of homozygotes: 0

Other
type: Population
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allele frequency: 9.803921568627451e-3
allele num: 102
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

MQRankSum
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DP
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FS
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ClippingRankSum
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SIO_000300: -7.9e-1

InbreedingCoeff
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SIO_000300: 1.552e-1

QD
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ReadPosRankSum
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SIO_000300: 6.01e-1

MQ
type: SiteQuality
SIO_000300: 5.636e1

VQSLOD
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SIO_000300: 1.18e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1804
num of homozygotes: 0

Latino
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allele frequency: 3.885003885003885e-4
allele num: 2574
num of homozygotes: 0

East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 3.217503217503217e-4
allele num: 3108
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5984
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.636e1

DP
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MQRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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SIO_000300: 1.552e-1

FS
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 1.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.01e-1

African
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allele count: 1
allele frequency: 5.543237250554324e-4
allele num: 1804
num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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SIO_000300: 1.552e-1

QD
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VQSLOD
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MQ
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FS
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BaseQRankSum
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SIO_000300: 1.67e-1

DP
type: SiteQuality
SIO_000300: 4.12731e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-1

Latino
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allele count: 1
allele frequency: 3.885003885003885e-4
allele num: 2574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

South Asian
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allele count: 6
allele frequency: 1.930501930501931e-3
allele num: 3108
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.552e-1

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.636e1

DP
type: SiteQuality
SIO_000300: 4.12731e5

QD
type: SiteQuality
SIO_000300: 1.231e1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3108
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2860
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.552e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.231e1

DP
type: SiteQuality
SIO_000300: 4.12731e5

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

MQ
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SIO_000300: 5.636e1

MQRankSum
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SIO_000300: 1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.01e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2874
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.610305958132045e-4
allele num: 6210
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 7.656967840735069e-4
allele num: 2612
num of homozygotes: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
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VQSLOD
type: SiteQuality
SIO_000300: -1.955e0

MQ
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InbreedingCoeff
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FS
type: SiteQuality
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BaseQRankSum
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MQRankSum
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SIO_000300: 4.14e0

ClippingRankSum
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SIO_000300: -9.24e-1

DP
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1818
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 292
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South Asian
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allele frequency: 0.0e0
allele num: 1958
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 2.092050209205021e-3
allele num: 1912
num of homozygotes: 0

Other
type: Population
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ReadPosRankSum
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QD
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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SIO_000300: 1.23e-1

MQ
type: SiteQuality
SIO_000300: 4.712e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
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allele num: 52
num of homozygotes: 0

African
type: Population
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allele frequency: 3.968253968253968e-3
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num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 1.167315175097276e-3
allele num: 2570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 3.424657534246575e-2
allele num: 292
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.53217568947906e-3
allele num: 1958
num of homozygotes: 0

European (Non-Finnish)
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allele count: 47
allele frequency: 2.4581589958159e-2
allele num: 1912
num of homozygotes: 0

Latino
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InbreedingCoeff
type: SiteQuality
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FS
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DP
type: SiteQuality
SIO_000300: 4.26456e5

MQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 4.712e1

VQSLOD
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SIO_000300: 5.39e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 620
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2570
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South Asian
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African
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Latino
type: Population
allele count: 2
allele frequency: 1.1001100110011e-3
allele num: 1818
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1912
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.26456e5

VQSLOD
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 3.239e-1

MQ
type: SiteQuality
SIO_000300: 4.712e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.01e-1

QD
type: SiteQuality
SIO_000300: 1.84e1

GenotypeQuality
all individuals: 248
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1007
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 206
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 5.5005500550055e-4
allele num: 1818
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 2.092050209205021e-3
allele num: 1912
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1958
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.26456e5

MQ
type: SiteQuality
SIO_000300: 4.712e1

MQRankSum
type: SiteQuality
SIO_000300: 8.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.239e-1

QD
type: SiteQuality
SIO_000300: 1.84e1

FS
type: SiteQuality
SIO_000300: 7.753e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.01e-1

GenotypeQuality
all individuals: 1306
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1179
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 194
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1686
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.913509376195943e-4
allele num: 5226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 106
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1714
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.55e-2

MQ
type: SiteQuality
SIO_000300: 5.78e1

MQRankSum
type: SiteQuality
SIO_000300: 1.7e0

FS
type: SiteQuality
SIO_000300: 2.279e0

VQSLOD
type: SiteQuality
SIO_000300: -4.66e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.62e-1

QD
type: SiteQuality
SIO_000300: 1.92e0

DP
type: SiteQuality
SIO_000300: 4.39961e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.89e-1

GenotypeQuality
all individuals: 1179
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 1306
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 417
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 363
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 194
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1686
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1780
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 9.75e1
variant carriers: 142

GenotypeQuality
all individuals: 318
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 193
bin: 4.25e1
variant carriers: 2

African
type: Population
allele count: 125
allele frequency: 7.292882147024504e-2
allele num: 1714
num of homozygotes: 6

Latino
type: Population
allele count: 11
allele frequency: 4.323899371069182e-3
allele num: 2544
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 9.433962264150943e-3
allele num: 106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 4.40107156525067e-3
allele num: 5226
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2890
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.39961e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.55e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.62e-1

FS
type: SiteQuality
SIO_000300: 2.279e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.96e-1

MQ
type: SiteQuality
SIO_000300: 5.78e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.89e-1

QD
type: SiteQuality
SIO_000300: 1.92e0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e0

VQSLOD
type: SiteQuality
SIO_000300: -4.66e-2

GenotypeQuality
all individuals: 398
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3617
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 430
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2035
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 492
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 5.186721991701245e-4
allele num: 1928
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 1.031636863823934e-3
allele num: 2908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1150
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3098
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.139952921035737e-4
allele num: 9346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4086
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.769e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.72e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.49e-1

DP
type: SiteQuality
SIO_000300: 5.95537e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.615e0

MQ
type: SiteQuality
SIO_000300: 5.238e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

VQSLOD
type: SiteQuality
SIO_000300: -2.122e0

FS
type: SiteQuality
SIO_000300: 4.8878e1

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3617
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 257
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1928
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.447381302006853e-4
allele num: 4086
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 4.279905842071474e-4
allele num: 9346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3098
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1150
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.122e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.615e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-2

MQ
type: SiteQuality
SIO_000300: 5.238e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.72e-2

FS
type: SiteQuality
SIO_000300: 4.8878e1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 5.95537e5

QD
type: SiteQuality
SIO_000300: 1.769e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.49e-1

GenotypeQuality
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1495
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 890
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1682
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1881
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2128
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2896
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3182
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.87e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

DP
type: SiteQuality
SIO_000300: 7.57073e5

MQRankSum
type: SiteQuality
SIO_000300: -2.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.914e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.0e0

FS
type: SiteQuality
SIO_000300: 5.156e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.179e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.448e0

QD
type: SiteQuality
SIO_000300: 4.83e0

GenotypeQuality
all individuals: 890
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1495
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10330
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 394
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1881
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2704
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 9.428032683846638e-4
allele num: 3182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18458
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.357378595002357e-4
allele num: 4242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.156e0

QD
type: SiteQuality
SIO_000300: 4.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.179e0

VQSLOD
type: SiteQuality
SIO_000300: -1.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.914e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.448e0

MQ
type: SiteQuality
SIO_000300: 4.87e1

MQRankSum
type: SiteQuality
SIO_000300: -2.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

DP
type: SiteQuality
SIO_000300: 7.57073e5

GenotypeQuality
all individuals: 390
bin: 3.75e1
variant carriers: 149

GenotypeQuality
all individuals: 914
bin: 6.75e1
variant carriers: 180

GenotypeQuality
all individuals: 317
bin: 4.25e1
variant carriers: 163

GenotypeQuality
all individuals: 273
bin: 5.25e1
variant carriers: 166

GenotypeQuality
all individuals: 890
bin: 7.5e0
variant carriers: 145

GenotypeQuality
all individuals: 495
bin: 2.75e1
variant carriers: 157

GenotypeQuality
all individuals: 1682
bin: 2.5e0
variant carriers: 104

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 161

GenotypeQuality
all individuals: 522
bin: 7.75e1
variant carriers: 152

GenotypeQuality
all individuals: 351
bin: 1.25e1
variant carriers: 132

GenotypeQuality
all individuals: 394
bin: 1.75e1
variant carriers: 152

GenotypeQuality
all individuals: 349
bin: 4.75e1
variant carriers: 185

GenotypeQuality
all individuals: 460
bin: 3.25e1
variant carriers: 150

GenotypeQuality
all individuals: 509
bin: 7.25e1
variant carriers: 150

GenotypeQuality
all individuals: 289
bin: 9.25e1
variant carriers: 150

GenotypeQuality
all individuals: 272
bin: 5.75e1
variant carriers: 181

GenotypeQuality
all individuals: 435
bin: 8.25e1
variant carriers: 157

GenotypeQuality
all individuals: 1881
bin: 6.25e1
variant carriers: 153

European (Finnish)
type: Population
allele count: 889
allele frequency: 4.177631578947368e-1
allele num: 2128
num of homozygotes: 41

East Asian
type: Population
allele count: 98
allele frequency: 3.383977900552486e-2
allele num: 2896
num of homozygotes: 0

African
type: Population
allele count: 967
allele frequency: 3.576183431952663e-1
allele num: 2704
num of homozygotes: 48

European (Non-Finnish)
type: Population
allele count: 7782
allele frequency: 4.216058077798245e-1
allele num: 18458
num of homozygotes: 342

Other
type: Population
allele count: 92
allele frequency: 4.144144144144144e-1
allele num: 222
num of homozygotes: 1

Latino
type: Population
allele count: 538
allele frequency: 1.69076052796983e-1
allele num: 3182
num of homozygotes: 9

South Asian
type: Population
allele count: 939
allele frequency: 2.213578500707214e-1
allele num: 4242
num of homozygotes: 38

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.448e0

QD
type: SiteQuality
SIO_000300: 4.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.914e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.179e0

MQ
type: SiteQuality
SIO_000300: 4.87e1

FS
type: SiteQuality
SIO_000300: 5.156e0

VQSLOD
type: SiteQuality
SIO_000300: -1.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.9e0

DP
type: SiteQuality
SIO_000300: 7.57073e5

GenotypeQuality
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 1881
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10330
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.417705060136526e-5
allele num: 18458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2896
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4242
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.83e0

MQRankSum
type: SiteQuality
SIO_000300: -2.9e0

FS
type: SiteQuality
SIO_000300: 5.156e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.448e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.914e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.179e0

DP
type: SiteQuality
SIO_000300: 7.57073e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

VQSLOD
type: SiteQuality
SIO_000300: -1.0e0

MQ
type: SiteQuality
SIO_000300: 4.87e1

GenotypeQuality
all individuals: 291
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 749
bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2144
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.679175864606328e-4
allele num: 2718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.1e-1

QD
type: SiteQuality
SIO_000300: 4.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.74e-2

DP
type: SiteQuality
SIO_000300: 2.40832e5

VQSLOD
type: SiteQuality
SIO_000300: 4.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-1

MQ
type: SiteQuality
SIO_000300: 5.687e1

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
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variant carriers: 0

GenotypeQuality
all individuals: 1702
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 358
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variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2748
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 9.328358208955224e-4
allele num: 2144
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.679175864606328e-4
allele num: 2718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.74e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.78e0

MQ
type: SiteQuality
SIO_000300: 5.687e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.29e-1

QD
type: SiteQuality
SIO_000300: 4.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-1

DP
type: SiteQuality
SIO_000300: 2.40832e5

GenotypeQuality
all individuals: 126
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 339
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variant carriers: 0

GenotypeQuality
all individuals: 161
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variant carriers: 0

GenotypeQuality
all individuals: 217
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GenotypeQuality
all individuals: 125
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 636
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 261
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variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2682
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 4.730368968779565e-4
allele num: 2114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2060
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2272
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.713e-1

QD
type: SiteQuality
SIO_000300: 1.744e1

FS
type: SiteQuality
SIO_000300: 4.049e0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 2.53871e5

MQ
type: SiteQuality
SIO_000300: 4.781e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.56e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 339
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variant carriers: 0

GenotypeQuality
all individuals: 627
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 192
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GenotypeQuality
all individuals: 244
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.802816901408451e-4
allele num: 2272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2060
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.56e-1

MQ
type: SiteQuality
SIO_000300: 4.781e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.713e-1

FS
type: SiteQuality
SIO_000300: 4.049e0

MQRankSum
type: SiteQuality
SIO_000300: 8.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

DP
type: SiteQuality
SIO_000300: 2.53871e5

QD
type: SiteQuality
SIO_000300: 1.744e1

GenotypeQuality
all individuals: 2261
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 114
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.25e1
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GenotypeQuality
all individuals: 231
bin: 1.75e1
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GenotypeQuality
all individuals: 192
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2682
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2272
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 9.708737864077669e-4
allele num: 2060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2114
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 4.781e1

MQRankSum
type: SiteQuality
SIO_000300: 8.47e-1

FS
type: SiteQuality
SIO_000300: 4.049e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.56e-1

DP
type: SiteQuality
SIO_000300: 2.53871e5

QD
type: SiteQuality
SIO_000300: 1.744e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.713e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2682
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.666666666666667e-2
allele num: 60
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2060
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.53871e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 4.049e0

MQRankSum
type: SiteQuality
SIO_000300: 8.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.713e-1

MQ
type: SiteQuality
SIO_000300: 4.781e1

QD
type: SiteQuality
SIO_000300: 1.744e1

GenotypeQuality
all individuals: 1748
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
all individuals: 104
bin: 5.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 8.25e1
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GenotypeQuality
all individuals: 348
bin: 7.25e1
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GenotypeQuality
all individuals: 881
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
all individuals: 230
bin: 3.75e1
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GenotypeQuality
all individuals: 125
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 334
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.145038167938931e-3
allele num: 2620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2956
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.07e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

FS
type: SiteQuality
SIO_000300: 2.112e1

QD
type: SiteQuality
SIO_000300: 5.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.35e-1

DP
type: SiteQuality
SIO_000300: 2.55153e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.79e-2

MQ
type: SiteQuality
SIO_000300: 5.773e1

GenotypeQuality
all individuals: 1216
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 117
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 6.75e1
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GenotypeQuality
all individuals: 348
bin: 7.25e1
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GenotypeQuality
all individuals: 230
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 125
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2956
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 334
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 3.816793893129771e-4
allele num: 2620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.76e-1

FS
type: SiteQuality
SIO_000300: 2.112e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.79e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.35e-1

DP
type: SiteQuality
SIO_000300: 2.55153e5

MQ
type: SiteQuality
SIO_000300: 5.773e1

QD
type: SiteQuality
SIO_000300: 5.78e0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 952
bin: 2.5e0
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GenotypeQuality
all individuals: 1748
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 125
bin: 9.25e1
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GenotypeQuality
all individuals: 748
bin: 6.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 358
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2956
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2808
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 4.646840148698885e-4
allele num: 2152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 990
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.76e-1

DP
type: SiteQuality
SIO_000300: 2.55153e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.79e-2

FS
type: SiteQuality
SIO_000300: 2.112e1

MQ
type: SiteQuality
SIO_000300: 5.773e1

VQSLOD
type: SiteQuality
SIO_000300: -7.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.07e-1

QD
type: SiteQuality
SIO_000300: 5.78e0

GenotypeQuality
all individuals: 268
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 3.25e1
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GenotypeQuality
all individuals: 580
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 877
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 785
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GenotypeQuality
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GenotypeQuality
all individuals: 1076
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GenotypeQuality
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GenotypeQuality
all individuals: 127
bin: 8.75e1
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GenotypeQuality
all individuals: 225
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.965599051008304e-4
allele num: 3372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1032
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.6e-2

QD
type: SiteQuality
SIO_000300: 3.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.37e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.688e0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.89e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

FS
type: SiteQuality
SIO_000300: 4.4735e1

DP
type: SiteQuality
SIO_000300: 2.69184e5

GenotypeQuality
all individuals: 482
bin: 7.75e1
variant carriers: 8

GenotypeQuality
all individuals: 200
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 376
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
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variant carriers: 1

GenotypeQuality
all individuals: 177
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variant carriers: 1

GenotypeQuality
all individuals: 278
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 200
bin: 5.25e1
variant carriers: 5

GenotypeQuality
all individuals: 439
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variant carriers: 5

GenotypeQuality
all individuals: 159
bin: 1.75e1
variant carriers: 12

GenotypeQuality
all individuals: 95
bin: 1.25e1
variant carriers: 9

GenotypeQuality
all individuals: 184
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1167
bin: 2.25e1
variant carriers: 9

GenotypeQuality
all individuals: 365
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 291
bin: 3.75e1
variant carriers: 3

South Asian
type: Population
allele count: 52
allele frequency: 1.719576719576719e-2
allele num: 3024
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 6
allele frequency: 1.214574898785425e-2
allele num: 494
num of homozygotes: 1

African
type: Population
allele count: 12
allele frequency: 1.13421550094518e-2
allele num: 1058
num of homozygotes: 1

Latino
type: Population
allele count: 4
allele frequency: 1.813236627379873e-3
allele num: 2206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 64
allele frequency: 1.683324566017885e-2
allele num: 3802
num of homozygotes: 3

East Asian
type: Population
allele count: 5
allele frequency: 1.771793054571226e-3
allele num: 2822
num of homozygotes: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

MQ
type: SiteQuality
SIO_000300: 4.712e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.335e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.031e0

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 2.73686e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 3.19e0

GenotypeQuality
all individuals: 184
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 7.5e0
variant carriers: 14

GenotypeQuality
all individuals: 1324
bin: 2.5e0
variant carriers: 79

GenotypeQuality
all individuals: 376
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variant carriers: 0

GenotypeQuality
all individuals: 95
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variant carriers: 2

GenotypeQuality
all individuals: 144
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variant carriers: 0

GenotypeQuality
all individuals: 278
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GenotypeQuality
all individuals: 1478
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variant carriers: 5

GenotypeQuality
all individuals: 226
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GenotypeQuality
all individuals: 177
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variant carriers: 0

GenotypeQuality
all individuals: 200
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variant carriers: 0

GenotypeQuality
all individuals: 365
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variant carriers: 0

GenotypeQuality
all individuals: 482
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variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2822
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.890359168241966e-3
allele num: 1058
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.052077853761178e-3
allele num: 3802
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3024
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.335e-1

DP
type: SiteQuality
SIO_000300: 2.73686e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

MQRankSum
type: SiteQuality
SIO_000300: -1.031e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 3.19e0

MQ
type: SiteQuality
SIO_000300: 4.712e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3024
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.162790697674419e-2
allele num: 86
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1058
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.712e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.69e-1

DP
type: SiteQuality
SIO_000300: 2.73686e5

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

MQRankSum
type: SiteQuality
SIO_000300: -1.031e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.335e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

GenotypeQuality
all individuals: 144
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
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variant carriers: 0

GenotypeQuality
all individuals: 376
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GenotypeQuality
all individuals: 291
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
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GenotypeQuality
all individuals: 1324
bin: 2.5e0
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GenotypeQuality
all individuals: 278
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variant carriers: 0

GenotypeQuality
all individuals: 95
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GenotypeQuality
all individuals: 159
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GenotypeQuality
all individuals: 200
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GenotypeQuality
all individuals: 2020
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GenotypeQuality
all individuals: 452
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GenotypeQuality
all individuals: 1478
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 439
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GenotypeQuality
all individuals: 177
bin: 8.75e1
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GenotypeQuality
all individuals: 891
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variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3802
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1058
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3024
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 9.066183136899365e-4
allele num: 2206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2822
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.031e0

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 2.73686e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.335e-1

MQ
type: SiteQuality
SIO_000300: 4.712e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 965
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 392
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variant carriers: 0

GenotypeQuality
all individuals: 305
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GenotypeQuality
all individuals: 406
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GenotypeQuality
all individuals: 515
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GenotypeQuality
all individuals: 1302
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 805
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GenotypeQuality
all individuals: 150
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GenotypeQuality
all individuals: 114
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GenotypeQuality
all individuals: 18
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GenotypeQuality
all individuals: 1969
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GenotypeQuality
all individuals: 142
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2252
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.124087591240876e-4
allele num: 1096
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2844
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.694e0

QD
type: SiteQuality
SIO_000300: 1.224e1

FS
type: SiteQuality
SIO_000300: 1.2041e1

DP
type: SiteQuality
SIO_000300: 6.24215e5

MQ
type: SiteQuality
SIO_000300: 5.428e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

VQSLOD
type: SiteQuality
SIO_000300: -1.044e0

MQRankSum
type: SiteQuality
SIO_000300: -2.435e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

GenotypeQuality
all individuals: 1943
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3928
bin: 2.5e0
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GenotypeQuality
all individuals: 330
bin: 3.75e1
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GenotypeQuality
all individuals: 165
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GenotypeQuality
all individuals: 412
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GenotypeQuality
all individuals: 740
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GenotypeQuality
all individuals: 355
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GenotypeQuality
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GenotypeQuality
all individuals: 411
bin: 2.75e1
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GenotypeQuality
all individuals: 1296
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 5.25e1
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GenotypeQuality
all individuals: 375
bin: 1.25e1
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GenotypeQuality
all individuals: 219
bin: 8.75e1
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GenotypeQuality
all individuals: 1961
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variant carriers: 4

GenotypeQuality
all individuals: 449
bin: 3.25e1
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GenotypeQuality
all individuals: 223
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2910
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.756756756756757e-4
allele num: 5920
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.21185e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.614e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.284e0

FS
type: SiteQuality
SIO_000300: 7.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.415e0

VQSLOD
type: SiteQuality
SIO_000300: 8.96e-1

MQ
type: SiteQuality
SIO_000300: 5.098e1

QD
type: SiteQuality
SIO_000300: 1.038e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

GenotypeQuality
all individuals: 223
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 2.75e1
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GenotypeQuality
all individuals: 3928
bin: 2.5e0
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GenotypeQuality
all individuals: 477
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GenotypeQuality
all individuals: 375
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GenotypeQuality
all individuals: 1296
bin: 2.25e1
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GenotypeQuality
all individuals: 240
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 7.5e0
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1943
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 219
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2520
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 5.875440658049354e-4
allele num: 1702
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.067567567567568e-4
allele num: 5920
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.878526194588371e-4
allele num: 3474
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.038e1

FS
type: SiteQuality
SIO_000300: 7.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.96e-1

DP
type: SiteQuality
SIO_000300: 6.21185e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.614e-1

MQ
type: SiteQuality
SIO_000300: 5.098e1

MQRankSum
type: SiteQuality
SIO_000300: -1.415e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.284e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.51e-1

GenotypeQuality
all individuals: 223
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 219
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 375
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 7.75e1
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GenotypeQuality
all individuals: 205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 3.25e1
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GenotypeQuality
all individuals: 825
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3928
bin: 2.5e0
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GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1943
bin: 6.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.533783783783784e-3
allele num: 5920
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2910
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.21185e5

MQRankSum
type: SiteQuality
SIO_000300: -1.415e0

MQ
type: SiteQuality
SIO_000300: 5.098e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

QD
type: SiteQuality
SIO_000300: 1.038e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.614e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.96e-1

FS
type: SiteQuality
SIO_000300: 7.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.284e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.51e-1

GenotypeQuality
all individuals: 1943
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 2.75e1
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GenotypeQuality
all individuals: 432
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GenotypeQuality
all individuals: 825
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 355
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.689189189189189e-4
allele num: 5920
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.96e-1

FS
type: SiteQuality
SIO_000300: 7.37e-1

QD
type: SiteQuality
SIO_000300: 1.038e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.614e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.284e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.415e0

MQ
type: SiteQuality
SIO_000300: 5.098e1

DP
type: SiteQuality
SIO_000300: 6.21185e5

GenotypeQuality
all individuals: 372
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 9.25e1
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GenotypeQuality
all individuals: 2284
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GenotypeQuality
all individuals: 945
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variant carriers: 0

GenotypeQuality
all individuals: 3290
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 384
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 638
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2328
bin: 9.75e1
variant carriers: 33

GenotypeQuality
all individuals: 246
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1407
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 7.462686567164179e-4
allele num: 2680
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 1.30718954248366e-3
allele num: 3060
num of homozygotes: 0

African
type: Population
allele count: 19
allele frequency: 9.471585244267198e-3
allele num: 2006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 962
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.122334455667789e-3
allele num: 7128
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.526528549772613e-4
allele num: 3958
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.379e1

MQRankSum
type: SiteQuality
SIO_000300: -3.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.836e0

DP
type: SiteQuality
SIO_000300: 6.61806e5

FS
type: SiteQuality
SIO_000300: 2.51e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.17e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.62e-1

QD
type: SiteQuality
SIO_000300: 9.93e0

GenotypeQuality
all individuals: 1742
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1849
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3720
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1091
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29626
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5600
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.017501017501017e-4
allele num: 9828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51188
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.576e0

FS
type: SiteQuality
SIO_000300: 8.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.578e0

DP
type: SiteQuality
SIO_000300: 2.666897e6

MQ
type: SiteQuality
SIO_000300: 4.902e1

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

QD
type: SiteQuality
SIO_000300: 9.57e0

GenotypeQuality
all individuals: 268
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3720
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 462
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1742
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 946
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 485
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 560
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 608
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 968
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29626
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1849
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 849
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.930374306478081e-4
allele num: 51188
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5600
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.666897e6

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.576e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

QD
type: SiteQuality
SIO_000300: 9.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.578e0

FS
type: SiteQuality
SIO_000300: 8.34e-1

MQ
type: SiteQuality
SIO_000300: 4.902e1

GenotypeQuality
all individuals: 301
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1807
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3850
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 484
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1054
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29757
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 179
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1700
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7880
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.460207612456747e-4
allele num: 5780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 9.768677711784933e-5
allele num: 51184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9720
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

FS
type: SiteQuality
SIO_000300: 3.111e0

VQSLOD
type: SiteQuality
SIO_000300: 2.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.51e-1

QD
type: SiteQuality
SIO_000300: 1.508e1

MQ
type: SiteQuality
SIO_000300: 5.405e1

MQRankSum
type: SiteQuality
SIO_000300: -1.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.38e-1

DP
type: SiteQuality
SIO_000300: 2.660681e6

GenotypeQuality
all individuals: 430
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1807
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1054
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1700
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29757
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3850
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6172
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.86120662707096e-5
allele num: 51184
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.508e1

VQSLOD
type: SiteQuality
SIO_000300: 2.48e0

MQ
type: SiteQuality
SIO_000300: 5.405e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.51e-1

FS
type: SiteQuality
SIO_000300: 3.111e0

DP
type: SiteQuality
SIO_000300: 2.660681e6

MQRankSum
type: SiteQuality
SIO_000300: -1.07e-1

GenotypeQuality
all individuals: 312
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 4

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29975
bin: 9.75e1
variant carriers: 72

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 67
allele frequency: 1.295036338333076e-3
allele num: 51736
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.69606512890095e-4
allele num: 5896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 9.321401938851603e-4
allele num: 5364
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.19e0

FS
type: SiteQuality
SIO_000300: 6.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.53e-1

DP
type: SiteQuality
SIO_000300: 2.669844e6

MQRankSum
type: SiteQuality
SIO_000300: -8.79e-1

MQ
type: SiteQuality
SIO_000300: 5.374e1

QD
type: SiteQuality
SIO_000300: 1.685e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

GenotypeQuality
all individuals: 956
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 451
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.932890057213546e-5
allele num: 51736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9876
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

MQRankSum
type: SiteQuality
SIO_000300: -8.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

MQ
type: SiteQuality
SIO_000300: 5.374e1

DP
type: SiteQuality
SIO_000300: 2.669844e6

VQSLOD
type: SiteQuality
SIO_000300: 3.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

FS
type: SiteQuality
SIO_000300: 6.41e-1

QD
type: SiteQuality
SIO_000300: 1.685e1

GenotypeQuality
all individuals: 1096
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 285
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 32

GenotypeQuality
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GenotypeQuality
all individuals: 726
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GenotypeQuality
all individuals: 520
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.527167045741723e-4
allele num: 7914
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 6.453694740238787e-4
allele num: 6198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5364
num of homozygotes: 0

African
type: Population
allele count: 18
allele frequency: 3.05291723202171e-3
allele num: 5896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.546312045770836e-4
allele num: 51736
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.012555690562981e-4
allele num: 9876
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

DP
type: SiteQuality
SIO_000300: 2.669844e6

QD
type: SiteQuality
SIO_000300: 1.685e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

MQ
type: SiteQuality
SIO_000300: 5.374e1

FS
type: SiteQuality
SIO_000300: 6.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

GenotypeQuality
all individuals: 1697
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1790
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 213
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7930
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6270
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50988
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.696403e6

FS
type: SiteQuality
SIO_000300: 2.239e0

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.27e0

MQ
type: SiteQuality
SIO_000300: 5.524e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.69e-2

QD
type: SiteQuality
SIO_000300: 1.974e1

GenotypeQuality
all individuals: 213
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1439
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 366
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variant carriers: 2

GenotypeQuality
all individuals: 1697
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GenotypeQuality
all individuals: 30075
bin: 9.75e1
variant carriers: 544

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 398
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variant carriers: 0

GenotypeQuality
all individuals: 168
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GenotypeQuality
all individuals: 1064
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GenotypeQuality
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GenotypeQuality
all individuals: 825
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 206
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variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.594896331738437e-4
allele num: 6270
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.130833155763904e-4
allele num: 9386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

Latino
type: Population
allele count: 28
allele frequency: 3.530895334174023e-3
allele num: 7930
num of homozygotes: 0

African
type: Population
allele count: 513
allele frequency: 8.931058495821727e-2
allele num: 5744
num of homozygotes: 22

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 3.726366988310975e-4
allele num: 50988
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.27e0

QD
type: SiteQuality
SIO_000300: 1.974e1

FS
type: SiteQuality
SIO_000300: 2.239e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

DP
type: SiteQuality
SIO_000300: 2.696403e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.69e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQ
type: SiteQuality
SIO_000300: 5.524e1

GenotypeQuality
all individuals: 302
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1320
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.203659123736158e-4
allele num: 8308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64078
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.991188635137565e-5
allele num: 11122
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.29e-1

MQ
type: SiteQuality
SIO_000300: 5.69e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

QD
type: SiteQuality
SIO_000300: 9.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.291e0

DP
type: SiteQuality
SIO_000300: 3.57508e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.23e-1

GenotypeQuality
all individuals: 206
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1921
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 39717
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64078
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.991188635137565e-5
allele num: 11122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9130
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.291e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.29e-1

DP
type: SiteQuality
SIO_000300: 3.57508e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

QD
type: SiteQuality
SIO_000300: 9.52e0

MQ
type: SiteQuality
SIO_000300: 5.69e1

GenotypeQuality
all individuals: 275
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1282
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 121
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2239
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GenotypeQuality
all individuals: 700
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GenotypeQuality
all individuals: 40241
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variant carriers: 11

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 158
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GenotypeQuality
all individuals: 962
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15000
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.183712121212121e-3
allele num: 8448
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.759635599159075e-5
allele num: 11416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64650
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

DP
type: SiteQuality
SIO_000300: 3.577949e6

QD
type: SiteQuality
SIO_000300: 1.112e1

FS
type: SiteQuality
SIO_000300: 2.8185e1

VQSLOD
type: SiteQuality
SIO_000300: -4.209e0

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQ
type: SiteQuality
SIO_000300: 5.753e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.01e-1

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.54526068547764e-5
allele num: 64714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15264
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.864e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.298e0

DP
type: SiteQuality
SIO_000300: 3.577664e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.299e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.491e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.037e0

QD
type: SiteQuality
SIO_000300: 4.47e0

GenotypeQuality
all individuals: 518
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 11

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1269
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.736676568233443e-5
allele num: 11446
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.298701298701299e-3
allele num: 8470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15140
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64592
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.082e1

MQ
type: SiteQuality
SIO_000300: 5.706e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

DP
type: SiteQuality
SIO_000300: 3.583105e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.84e-1

FS
type: SiteQuality
SIO_000300: 2.6701e1

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.805e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.043e0

GenotypeQuality
all individuals: 40283
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 49
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
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variant carriers: 0

GenotypeQuality
all individuals: 574
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variant carriers: 0

GenotypeQuality
all individuals: 40
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GenotypeQuality
all individuals: 2376
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variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 480
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variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15358
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.063603488619443e-4
allele num: 9402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64820
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.605e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

VQSLOD
type: SiteQuality
SIO_000300: -2.264e0

QD
type: SiteQuality
SIO_000300: 1.406e1

MQRankSum
type: SiteQuality
SIO_000300: 9.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.56e-1

DP
type: SiteQuality
SIO_000300: 3.585556e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.81e-1

FS
type: SiteQuality
SIO_000300: 2.0584e1

GenotypeQuality
all individuals: 201
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
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variant carriers: 0

GenotypeQuality
all individuals: 1216
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variant carriers: 0

GenotypeQuality
all individuals: 6864
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 270
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variant carriers: 0

GenotypeQuality
all individuals: 222
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variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 1964
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variant carriers: 0

GenotypeQuality
all individuals: 139
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variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40283
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 976
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.54273372415921e-5
allele num: 64820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.264e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

FS
type: SiteQuality
SIO_000300: 2.0584e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.61e-1

MQ
type: SiteQuality
SIO_000300: 5.605e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.56e-1

QD
type: SiteQuality
SIO_000300: 1.406e1

DP
type: SiteQuality
SIO_000300: 3.585556e6

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 251
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GenotypeQuality
all individuals: 32
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1491
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variant carriers: 0

GenotypeQuality
all individuals: 1218
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variant carriers: 0

GenotypeQuality
all individuals: 970
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variant carriers: 0

GenotypeQuality
all individuals: 2490
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65026
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 7.394886963870695e-4
allele num: 9466
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.556e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.988e-1

QD
type: SiteQuality
SIO_000300: 1.213e1

MQ
type: SiteQuality
SIO_000300: 5.521e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.09e-1

FS
type: SiteQuality
SIO_000300: 6.981e0

DP
type: SiteQuality
SIO_000300: 3.596989e6

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1892
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variant carriers: 0

GenotypeQuality
all individuals: 40281
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variant carriers: 1

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 177
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2490
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1494
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variant carriers: 0

GenotypeQuality
all individuals: 7962
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.425083526085839e-5
allele num: 15564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65058
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.597509e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.25e-1

FS
type: SiteQuality
SIO_000300: 2.176e0

MQRankSum
type: SiteQuality
SIO_000300: 7.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.090000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.198e1

MQ
type: SiteQuality
SIO_000300: 5.942e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

GenotypeQuality
all individuals: 6711
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1883
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.5e0
variant carriers: 0