2-26536426-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536426
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536426
    reference: chr 2
allele count: 1
allele frequency: 1.019804605437598e-5
allele num: 98058
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1085G>A
  hgvsp: ENSP00000388537.2:p.Cys362Tyr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.695G>A
  hgvsp: ENSP00000327396.6:p.Cys232Tyr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1292G>A
  hgvsp: ENSP00000307831.1:p.Cys431Tyr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.695G>A
  hgvsp: ENSP00000404775.1:p.Cys232Tyr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1172G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.274G>A
  hgvsp: ENSP00000394162.1:p.Ala92Thr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+4901C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.101G>A
  hgvsp: ENSP00000445729.1:p.Cys34Tyr
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10959
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24553
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Cys431Tyr
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

2-26536429-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536429
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536429
    reference: chr 2
allele count: 1
allele frequency: 1.022369443422075e-5
allele num: 97812
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.692C>A
  hgvsp: ENSP00000404775.1:p.Thr231Asn
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1082C>A
  hgvsp: ENSP00000388537.2:p.Thr361Asn
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1289C>A
  hgvsp: ENSP00000307831.1:p.Thr430Asn
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.692C>A
  hgvsp: ENSP00000327396.6:p.Thr231Asn
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+4904G>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1169C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.98C>A
  hgvsp: ENSP00000445729.1:p.Thr33Asn
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.271C>A
  hgvsp: ENSP00000394162.1:p.Pro91Thr
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14445
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18746
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3580
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr430Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

2-26536438-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536438
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536438
    reference: chr 2
allele count: 1
allele frequency: 1.043144454644079e-5
allele num: 95864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+4913C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.262G>A
  hgvsp: ENSP00000394162.1:p.Glu88Lys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.89G>A
  hgvsp: ENSP00000445729.1:p.Gly30Glu
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1280G>A
  hgvsp: ENSP00000307831.1:p.Gly427Glu
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.683G>A
  hgvsp: ENSP00000327396.6:p.Gly228Glu
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.683G>A
  hgvsp: ENSP00000404775.1:p.Gly228Glu
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1073G>A
  hgvsp: ENSP00000388537.2:p.Gly358Glu
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1160G>A
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16848
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11943
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1648
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20680
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly427Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

2-26536453-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536453
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536453
    reference: chr 2
allele count: 9
allele frequency: 9.939699158438804e-5
allele num: 90546
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1157-12G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1070-12G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1277-12G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.680-12G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.680-12G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.259-12G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.86-12G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+4928C>T
  variant of: http://identifiers.org/hgnc/29361
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6979
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13433
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4688
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23239
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9133
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3597
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1196
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23405
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

2-26536454-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536454
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536454
    reference: chr 2
allele count: 1
allele frequency: 1.103655306374713e-5
allele num: 90608
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+4929G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.680-13C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1277-13C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.259-13C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.680-13C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.86-13C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1070-13C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1157-13C>T
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1088
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23779
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-26536461-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536461
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536461
    reference: chr 2
allele count: 219
allele frequency: 2.506466454551697e-3
allele num: 87374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.680-20G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1277-20G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+4936C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.680-20G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.259-20G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.86-20G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1157-20G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1070-20G>A
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14480
  bin: 7.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 6946
  bin: 2.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 24116
  bin: 1.25e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8268
  bin: 1.75e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7711
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 4.75e1
  variant carriers: 2
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ

2-26536462-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536462
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536462
    reference: chr 2
allele count: 1
allele frequency: 1.146289461014695e-5
allele num: 87238
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1277-21C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.259-21C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1157-21C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+4937G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1070-21C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.680-21C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.86-21C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.680-21C>T
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14654
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23839
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7567
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1109
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

2-26536479-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536479
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536479
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 80884
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1070-38C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.259-38C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1157-38C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.680-38C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1277-38C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.680-38C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.86-38C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+4954G>A
  variant of: http://identifiers.org/hgnc/29361
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17149
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2988
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6821
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5070
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-26536486-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536486
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536486
    reference: chr 2
allele count: 4
allele frequency: 5.094503031229303e-5
allele num: 78516
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.259-45G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1277-45G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.86-45G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.680-45G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1157-45G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+4961C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1070-45G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.680-45G>A
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22057
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9889
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6692
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8387
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2530
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3067
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4310
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1958
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

2-26536490-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536490
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536490
    reference: chr 2
allele count: 3
allele frequency: 3.847535012568614e-5
allele num: 77972
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1157-49C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.86-49C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1070-49C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.259-49C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.680-49C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1277-49C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+4965G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.680-49C>T
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9719
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21977
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2930
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6624
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5210
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8391
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

2-26536580-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536580
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536580
    reference: chr 2
allele count: 1
allele frequency: 8.588999209812073e-6
allele num: 116428
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1069+48G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.679+48G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1276+48G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.85+48G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.679+48G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1156+48G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5055C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.258+48G>A
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12389
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7662
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4178
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5987
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4581
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3446
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3619
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5470
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

2-26536584-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536584
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536584
    reference: chr 2
allele count: 2
allele frequency: 1.714942292191868e-5
allele num: 116622
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.85+44C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5059G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.258+44C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1276+44C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1069+44C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.679+44C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1156+44C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.679+44C>T
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16445
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10583
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3449
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1941
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2980
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2574
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13904
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3968
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

2-26536591-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536591
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536591
    reference: chr 2
allele count: 1
allele frequency: 8.555198138388885e-6
allele num: 116888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5066G>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.85+37C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1069+37C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1276+37C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1156+37C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.258+37C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.679+37C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.679+37C>A
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18864
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7491
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3633
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2892
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3318
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2954
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ

2-26536594-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536594
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536594
    reference: chr 2
allele count: 1
allele frequency: 8.550808906522558e-6
allele num: 116948
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1156+34C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1276+34C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5069G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.679+34C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.85+34C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.258+34C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.679+34C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1069+34C>T
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12012
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2748
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6562
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3263
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1676
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2977
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/2-26536599-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536599
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536599
    reference: chr 2
allele count: 1
allele frequency: 8.539855505644844e-6
allele num: 117098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.679+29G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.85+29G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.258+29G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1156+29G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5074C>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1069+29G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.679+29G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1276+29G>T
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4586
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2821
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20609
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1568
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2863
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/2-26536604-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536604
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536604
    reference: chr 2
allele count: 2
allele frequency: 1.703867779860283e-5
allele num: 117380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.679+24G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.679+24G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1276+24G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1069+24G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1156+24G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5079C>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.85+24G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.258+24G>T
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22831
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5073
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7401
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3382
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21855
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 998
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4178
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

2-26536623-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536623
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536623
    reference: chr 2
allele count: 2
allele frequency: 1.679148335963999e-5
allele num: 119108
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.679+5G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1156+5G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.85+5G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1069+5G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1276+5G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.258+5G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.679+5G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5098C>T
  variant of: http://identifiers.org/hgnc/29361
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15222
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3798
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1418
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 4.75e1
  variant carriers: 0
hgvs: c.1276+5G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

2-26536624-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536624
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536624
    reference: chr 2
allele count: 1
allele frequency: 8.380543729677181e-6
allele num: 119324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1156+4C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1276+4C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5099G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.85+4C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.679+4C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.258+4C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1069+4C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.679+4C>T
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25502
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8947
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4902
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 9.25e1
  variant carriers: 0
hgvs: c.1276+4C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD

2-26536626-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536626
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536626
    reference: chr 2
allele count: 1
allele frequency: 8.365260745177427e-6
allele num: 119542
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5101A>G
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1069+2T>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1156+2T>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.258+2T>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1276+2T>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.85+2T>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.679+2T>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.679+2T>C
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15464
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5751
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1923
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1183
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 3.25e1
  variant carriers: 0
hgvs: c.1276+2T>C
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

2-26536629-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536629
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536629
    reference: chr 2
allele count: 19
allele frequency: 1.586691831042373e-4
allele num: 119746
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1275G>C
  hgvsp: ENSP00000307831.1:p.Gln425His
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5104C>G
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1155G>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.257G>C
  hgvsp: ENSP00000394162.1:p.Arg86Thr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.678G>C
  hgvsp: ENSP00000327396.6:p.Gln226His
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.84G>C
  hgvsp: ENSP00000445729.1:p.Gln28His
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1068G>C
  hgvsp: ENSP00000388537.2:p.Gln356His
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.678G>C
  hgvsp: ENSP00000404775.1:p.Gln226His
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9185
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15616
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5790
  bin: 9.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 27128
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln425His
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

2-26536637-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536637
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536637
    reference: chr 2
allele count: 4
allele frequency: 3.327454829800686e-5
allele num: 120212
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.249A>G
  hgvsp: ENST00000435303.1:c.249A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.670A>G
  hgvsp: ENSP00000404775.1:p.Ile224Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.670A>G
  hgvsp: ENSP00000327396.6:p.Ile224Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5112T>C
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1147A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1267A>G
  hgvsp: ENSP00000307831.1:p.Ile423Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.76A>G
  hgvsp: ENSP00000445729.1:p.Ile26Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1060A>G
  hgvsp: ENSP00000388537.2:p.Ile354Val
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5123
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile423Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: T
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

2-26536639-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536639
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536639
    reference: chr 2
allele count: 1
allele frequency: 8.311446524153063e-6
allele num: 120316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.668C>A
  hgvsp: ENSP00000327396.6:p.Thr223Asn
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1265C>A
  hgvsp: ENSP00000307831.1:p.Thr422Asn
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.668C>A
  hgvsp: ENSP00000404775.1:p.Thr223Asn
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.247C>A
  hgvsp: ENSP00000394162.1:p.Pro83Thr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.74C>A
  hgvsp: ENSP00000445729.1:p.Thr25Asn
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1058C>A
  hgvsp: ENSP00000388537.2:p.Thr353Asn
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1145C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5114G>T
  variant of: http://identifiers.org/hgnc/29361
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15964
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27326
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr422Asn
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

2-26536644-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536644
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536644
    reference: chr 2
allele count: 1
allele frequency: 8.302889405513118e-6
allele num: 120440
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1053C>A
  hgvsp: ENST00000421160.2:c.1053C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.69C>A
  hgvsp: ENST00000541401.1:c.69C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.242C>A
  hgvsp: ENSP00000394162.1:p.Pro81Gln
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.663C>A
  hgvsp: ENST00000447444.1:c.663C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1260C>A
  hgvsp: ENST00000311519.1:c.1260C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5119G>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1140C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.663C>A
  hgvsp: ENST00000333478.6:c.663C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8698
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27133
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4126
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro81Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-26536647-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536647
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536647
    reference: chr 2
allele count: 1
allele frequency: 8.294074713025015e-6
allele num: 120568
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.660C>T
  hgvsp: ENST00000447444.1:c.660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1257C>T
  hgvsp: ENST00000311519.1:c.1257C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.66C>T
  hgvsp: ENST00000541401.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.239C>T
  hgvsp: ENSP00000394162.1:p.Ser80Phe
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1050C>T
  hgvsp: ENST00000421160.2:c.1050C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.660C>T
  hgvsp: ENST00000333478.6:c.660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1137C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5122G>A
  variant of: http://identifiers.org/hgnc/29361
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9707
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1791
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27195
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser80Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-26536653-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536653
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536653
    reference: chr 2
allele count: 1
allele frequency: 8.287888080359362e-6
allele num: 120658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5128G>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1131C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.60C>A
  hgvsp: ENST00000541401.1:c.60C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.233C>A
  hgvsp: ENSP00000394162.1:p.Ser78Tyr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.654C>A
  hgvsp: ENST00000333478.6:c.654C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1251C>A
  hgvsp: ENST00000311519.1:c.1251C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.654C>A
  hgvsp: ENST00000447444.1:c.654C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1044C>A
  hgvsp: ENST00000421160.2:c.1044C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9830
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4215
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3967
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26933
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8826
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser78Tyr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

2-26536670-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536670
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536670
    reference: chr 2
allele count: 1
allele frequency: 8.270614506657845e-6
allele num: 120910
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.43C>G
  hgvsp: ENSP00000445729.1:p.Leu15Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.637C>G
  hgvsp: ENSP00000327396.6:p.Leu213Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.637C>G
  hgvsp: ENSP00000404775.1:p.Leu213Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5145G>C
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1114C>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1234C>G
  hgvsp: ENSP00000307831.1:p.Leu412Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1027C>G
  hgvsp: ENSP00000388537.2:p.Leu343Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.216C>G
  hgvsp: ENST00000435303.1:c.216C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4084
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4342
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu412Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

2-26536674-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536674
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536674
    reference: chr 2
allele count: 2
allele frequency: 1.653493832468005e-5
allele num: 120956
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1230G>A
  hgvsp: ENST00000311519.1:c.1230G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5149C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1023G>A
  hgvsp: ENST00000421160.2:c.1023G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1110G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.633G>A
  hgvsp: ENST00000447444.1:c.633G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.39G>A
  hgvsp: ENST00000541401.1:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.212G>A
  hgvsp: ENSP00000394162.1:p.Trp71Ter
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.633G>A
  hgvsp: ENST00000333478.6:c.633G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26595
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Trp71Ter
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

2-26536680-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536680
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536680
    reference: chr 2
allele count: 1
allele frequency: 8.262141216517673e-6
allele num: 121034
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5155C>G
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1017G>C
  hgvsp: ENSP00000388537.2:p.Gln339His
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.33G>C
  hgvsp: ENSP00000445729.1:p.Gln11His
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1104G>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.627G>C
  hgvsp: ENSP00000404775.1:p.Gln209His
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.206G>C
  hgvsp: ENSP00000394162.1:p.Arg69Thr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.627G>C
  hgvsp: ENSP00000327396.6:p.Gln209His
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1224G>C
  hgvsp: ENSP00000307831.1:p.Gln408His
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4394
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln408His
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

2-26536682-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536682
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536682
    reference: chr 2
allele count: 11
allele frequency: 9.088054990994563e-5
allele num: 121038
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5157G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1015C>T
  hgvsp: ENSP00000388537.2:p.Gln339Ter
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1222C>T
  hgvsp: ENSP00000307831.1:p.Gln408Ter
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.625C>T
  hgvsp: ENSP00000327396.6:p.Gln209Ter
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.625C>T
  hgvsp: ENSP00000404775.1:p.Gln209Ter
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.204C>T
  hgvsp: ENST00000435303.1:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1102C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.31C>T
  hgvsp: ENSP00000445729.1:p.Gln11Ter
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4150
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26744
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5543
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln408Ter
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

2-26536686-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536686
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536686
    reference: chr 2
allele count: 1
allele frequency: 8.259548037531387e-6
allele num: 121072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.27C>T
  hgvsp: ENST00000541401.1:c.27C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.200C>T
  hgvsp: ENSP00000394162.1:p.Thr67Ile
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1011C>T
  hgvsp: ENST00000421160.2:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.621C>T
  hgvsp: ENST00000333478.6:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5161G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1218C>T
  hgvsp: ENST00000311519.1:c.1218C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.621C>T
  hgvsp: ENST00000447444.1:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1098C>T
  variant of: http://identifiers.org/hgnc/18989
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16708
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26616
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr67Ile
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

2-26536694-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536694
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536694
    reference: chr 2
allele count: 81896
allele frequency: 6.75876867211356e-1
allele num: 121170
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1003G>A
  hgvsp: ENSP00000388537.2:p.Ala335Thr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1210G>A
  hgvsp: ENSP00000307831.1:p.Ala404Thr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1090G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5169C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.192G>A
  hgvsp: ENST00000435303.1:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.613G>A
  hgvsp: ENSP00000404775.1:p.Ala205Thr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.613G>A
  hgvsp: ENSP00000327396.6:p.Ala205Thr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.19G>A
  hgvsp: ENSP00000445729.1:p.Ala7Thr
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 3.25e1
  variant carriers: 1266
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3704
  bin: 4.25e1
  variant carriers: 3489
genotype depth: GenotypeDepth
  all individuals: 4466
  bin: 4.75e1
  variant carriers: 4364
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 256
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 5.25e1
  variant carriers: 5136
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 2.75e1
  variant carriers: 683
genotype depth: GenotypeDepth
  all individuals: 5165
  bin: 5.75e1
  variant carriers: 5115
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 7.25e1
  variant carriers: 3684
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 2.25e1
  variant carriers: 459
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 9.25e1
  variant carriers: 1772
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 6.75e1
  variant carriers: 4274
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 3.75e1
  variant carriers: 2323
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 7.75e1
  variant carriers: 3157
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 8.75e1
  variant carriers: 2087
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 8.25e1
  variant carriers: 2577
genotype depth: GenotypeDepth
  all individuals: 8452
  bin: 9.75e1
  variant carriers: 8447
genotype depth: GenotypeDepth
  all individuals: 4789
  bin: 6.25e1
  variant carriers: 4747
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 8.75e1
  variant carriers: 153
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 7.25e1
  variant carriers: 111
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 7.75e1
  variant carriers: 170
hgvs: p.Ala404Thr
num of homozygotes: 27929
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

2-26536695-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536695
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536695
    reference: chr 2
allele count: 3
allele frequency: 2.475982965237199e-5
allele num: 121164
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5170G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.191C>T
  hgvsp: ENSP00000394162.1:p.Thr64Met
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.18C>T
  hgvsp: ENST00000541401.1:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1209C>T
  hgvsp: ENST00000311519.1:c.1209C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.612C>T
  hgvsp: ENST00000447444.1:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1002C>T
  hgvsp: ENST00000421160.2:c.1002C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1089C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.612C>T
  hgvsp: ENST00000333478.6:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2767
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr64Met
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

2-26536696-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536696
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536696
    reference: chr 2
allele count: 4
allele frequency: 3.301365114474835e-5
allele num: 121162
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.1001A>G
  hgvsp: ENSP00000388537.2:p.Tyr334Cys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.611A>G
  hgvsp: ENSP00000327396.6:p.Tyr204Cys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5171T>C
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.17A>G
  hgvsp: ENSP00000445729.1:p.Tyr6Cys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1208A>G
  hgvsp: ENSP00000307831.1:p.Tyr403Cys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.611A>G
  hgvsp: ENSP00000404775.1:p.Tyr204Cys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1088A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.190A>G
  hgvsp: ENSP00000394162.1:p.Thr64Ala
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5548
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2775
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1423
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Tyr403Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS

http://identifiers.org/exac.variant/2-26536698-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536698
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536698
    reference: chr 2
allele count: 1
allele frequency: 8.253821519363466e-6
allele num: 121156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.609G>T
  hgvsp: ENST00000447444.1:c.609G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.609G>T
  hgvsp: ENST00000333478.6:c.609G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.15G>T
  hgvsp: ENST00000541401.1:c.15G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1086G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5173C>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.999G>T
  hgvsp: ENST00000421160.2:c.999G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.188G>T
  hgvsp: ENSP00000394162.1:p.Arg63Leu
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1206G>T
  hgvsp: ENST00000311519.1:c.1206G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4932
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5548
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7218
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg63Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

2-26536698-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536698
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536698
    reference: chr 2
allele count: 3
allele frequency: 2.47614645580904e-5
allele num: 121156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1086G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5173C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.188G>A
  hgvsp: ENSP00000394162.1:p.Arg63His
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.609G>A
  hgvsp: ENST00000447444.1:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.999G>A
  hgvsp: ENST00000421160.2:c.999G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.15G>A
  hgvsp: ENST00000541401.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.609G>A
  hgvsp: ENST00000333478.6:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1206G>A
  hgvsp: ENST00000311519.1:c.1206G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4932
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5548
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7218
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg63His
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum

2-26536699-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536699
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536699
    reference: chr 2
allele count: 15
allele frequency: 1.23807322790452e-4
allele num: 121156
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1205C>T
  hgvsp: ENSP00000307831.1:p.Thr402Met
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.608C>T
  hgvsp: ENSP00000327396.6:p.Thr203Met
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1085C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.14C>T
  hgvsp: ENSP00000445729.1:p.Thr5Met
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.998C>T
  hgvsp: ENSP00000388537.2:p.Thr333Met
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.187C>T
  hgvsp: ENSP00000394162.1:p.Arg63Cys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.608C>T
  hgvsp: ENSP00000404775.1:p.Thr203Met
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5174G>A
  variant of: http://identifiers.org/hgnc/29361
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5552
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4932
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3485
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2778
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr402Met
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

2-26536703-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536703
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536703
    reference: chr 2
allele count: 1
allele frequency: 8.253140319891718e-6
allele num: 121166
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1081A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.183A>G
  hgvsp: ENST00000435303.1:c.183A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.994A>G
  hgvsp: ENSP00000388537.2:p.Thr332Ala
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.10A>G
  hgvsp: ENSP00000445729.1:p.Thr4Ala
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.604A>G
  hgvsp: ENSP00000404775.1:p.Thr202Ala
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5178T>C
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.604A>G
  hgvsp: ENSP00000327396.6:p.Thr202Ala
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1201A>G
  hgvsp: ENSP00000307831.1:p.Thr401Ala
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3756
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1973
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr401Ala
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

2-26536704-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536704
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536704
    reference: chr 2
allele count: 1
allele frequency: 8.253821519363466e-6
allele num: 121156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.603C>T
  hgvsp: ENST00000333478.6:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1200C>T
  hgvsp: ENST00000311519.1:c.1200C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5179G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1080C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.993C>T
  hgvsp: ENST00000421160.2:c.993C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.603C>T
  hgvsp: ENST00000447444.1:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.182C>T
  hgvsp: ENSP00000394162.1:p.Thr61Ile
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.9C>T
  hgvsp: ENST00000541401.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5551
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3756
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2779
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7248
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr61Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

2-26536705-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536705
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536705
    reference: chr 2
allele count: 1
allele frequency: 8.253685270473266e-6
allele num: 121158
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1199A>T
  hgvsp: ENSP00000307831.1:p.Asp400Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5180T>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.992A>T
  hgvsp: ENSP00000388537.2:p.Asp331Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.602A>T
  hgvsp: ENSP00000404775.1:p.Asp201Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.602A>T
  hgvsp: ENSP00000327396.6:p.Asp201Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.8A>T
  hgvsp: ENSP00000445729.1:p.Asp3Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.181A>T
  hgvsp: ENSP00000394162.1:p.Thr61Ser
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1079A>T
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3756
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4280
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4934
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1928
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp400Val
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS

2-26536713-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536713
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536713
    reference: chr 2
allele count: 1
allele frequency: 8.256138438929344e-6
allele num: 121122
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.594G>A
  hgvsp: ENST00000333478.6:c.594G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-1G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.594G>A
  hgvsp: ENST00000447444.1:c.594G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5188C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.173G>A
  hgvsp: ENSP00000394162.1:p.Arg58Gln
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1071G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.984G>A
  hgvsp: ENST00000421160.2:c.984G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1191G>A
  hgvsp: ENST00000311519.1:c.1191G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3483
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4934
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3756
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5594
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2775
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1263
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41510
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg58Gln
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ

2-26536714-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536714
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536714
    reference: chr 2
allele count: 1
allele frequency: 8.256547442121603e-6
allele num: 121116
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.593C>T
  hgvsp: ENSP00000404775.1:p.Pro198Leu
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.983C>T
  hgvsp: ENSP00000388537.2:p.Pro328Leu
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.593C>T
  hgvsp: ENSP00000327396.6:p.Pro198Leu
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.172C>T
  hgvsp: ENSP00000394162.1:p.Arg58Ter
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1070C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1190C>T
  hgvsp: ENSP00000307831.1:p.Pro397Leu
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-2C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5189G>A
  variant of: http://identifiers.org/hgnc/29361
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5591
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3756
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41505
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg58Ter
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum

2-26536717-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536717
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536717
    reference: chr 2
allele count: 1
allele frequency: 8.256002113536541e-6
allele num: 121124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.980G>A
  hgvsp: ENSP00000388537.2:p.Cys327Tyr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.590G>A
  hgvsp: ENSP00000327396.6:p.Cys197Tyr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1187G>A
  hgvsp: ENSP00000307831.1:p.Cys396Tyr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.590G>A
  hgvsp: ENSP00000404775.1:p.Cys197Tyr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1067G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-5G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5192C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.169G>A
  hgvsp: ENSP00000394162.1:p.Ala57Thr
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4935
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5552
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3756
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3483
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys396Tyr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-26536720-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536720
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536720
    reference: chr 2
allele count: 1
allele frequency: 8.256820133430213e-6
allele num: 121112
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.587G>T
  hgvsp: ENSP00000327396.6:p.Arg196Leu
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1184G>T
  hgvsp: ENSP00000307831.1:p.Arg395Leu
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.166G>T
  hgvsp: ENSP00000394162.1:p.Ala56Ser
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.587G>T
  hgvsp: ENSP00000404775.1:p.Arg196Leu
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5195C>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.977G>T
  hgvsp: ENSP00000388537.2:p.Arg326Leu
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1064G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-8G>T
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2304
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3756
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1902
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg395Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

2-26536720-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536720
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536720
    reference: chr 2
allele count: 3
allele frequency: 2.477046040029064e-5
allele num: 121112
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.977G>A
  hgvsp: ENSP00000388537.2:p.Arg326His
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.166G>A
  hgvsp: ENSP00000394162.1:p.Ala56Thr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5195C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.587G>A
  hgvsp: ENSP00000327396.6:p.Arg196His
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1064G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.587G>A
  hgvsp: ENSP00000404775.1:p.Arg196His
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-8G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1184G>A
  hgvsp: ENSP00000307831.1:p.Arg395His
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3756
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2304
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2769
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1976
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg395His
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

2-26536721-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536721
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536721
    reference: chr 2
allele count: 3
allele frequency: 2.477250582153887e-5
allele num: 121102
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1183C>T
  hgvsp: ENSP00000307831.1:p.Arg395Cys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.165C>T
  hgvsp: ENST00000435303.1:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.586C>T
  hgvsp: ENSP00000327396.6:p.Arg196Cys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-9C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1063C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.586C>T
  hgvsp: ENSP00000404775.1:p.Arg196Cys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.976C>T
  hgvsp: ENSP00000388537.2:p.Arg326Cys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5196G>A
  variant of: http://identifiers.org/hgnc/29361
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3481
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1925
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg395Cys
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

2-26536727-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536727
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536727
    reference: chr 2
allele count: 3091
allele frequency: 2.552393849812555e-2
allele num: 121102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5202C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.970G>A
  hgvsp: ENSP00000388537.2:p.Val324Ile
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-15G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1057G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1177G>A
  hgvsp: ENSP00000307831.1:p.Val393Ile
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.580G>A
  hgvsp: ENSP00000404775.1:p.Val194Ile
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.159G>A
  hgvsp: ENST00000435303.1:c.159G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.580G>A
  hgvsp: ENSP00000327396.6:p.Val194Ile
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3511
  bin: 6.75e1
  variant carriers: 236
genotype depth: GenotypeDepth
  all individuals: 4331
  bin: 3.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 4.25e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 4305
  bin: 9.75e1
  variant carriers: 848
genotype depth: GenotypeDepth
  all individuals: 5420
  bin: 5.25e1
  variant carriers: 166
genotype depth: GenotypeDepth
  all individuals: 5398
  bin: 4.75e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 5765
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 7.75e1
  variant carriers: 240
genotype depth: GenotypeDepth
  all individuals: 3820
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 8.25e1
  variant carriers: 197
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 6.25e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 7.25e1
  variant carriers: 285
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 5.75e1
  variant carriers: 202
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 8.75e1
  variant carriers: 196
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 9.25e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 3.75e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1899
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val393Ile
num of homozygotes: 50
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

2-26536732-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536732
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536731
    reference: chr 2
allele count: 1
allele frequency: 8.257911078813503e-6
allele num: 121096
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.574delC
  hgvsp: ENSP00000327396.6:p.Leu192TrpfsTer70
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.574delC
  hgvsp: ENSP00000404775.1:p.Leu192TrpfsTer70
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5208delG
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.153delC
  hgvsp: ENSP00000394162.1:p.Trp52GlyfsTer9
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1051delC
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.964delC
  hgvsp: ENSP00000388537.2:p.Leu322TrpfsTer70
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1171delC
  hgvsp: ENSP00000307831.1:p.Leu391TrpfsTer70
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-21delC
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5562
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu391TrpfsTer70
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: AG
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

2-26536734-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536734
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536734
    reference: chr 2
allele count: 1
allele frequency: 8.259002312520648e-6
allele num: 121080
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5209C>G
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.152G>C
  hgvsp: ENSP00000394162.1:p.Cys51Ser
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1170G>C
  hgvsp: ENST00000311519.1:c.1170G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.963G>C
  hgvsp: ENST00000421160.2:c.963G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.573G>C
  hgvsp: ENST00000333478.6:c.573G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-22G>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1050G>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.573G>C
  hgvsp: ENST00000447444.1:c.573G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5562
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Cys51Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/2-26536735-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536735
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536734
    reference: chr 2
allele count: 1
allele frequency: 8.258729477057249e-6
allele num: 121084
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.150delG
  hgvsp: ENSP00000394162.1:p.Leu50PhefsTer11
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1168delG
  hgvsp: ENSP00000307831.1:p.Val390CysfsTer71
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.571delG
  hgvsp: ENSP00000327396.6:p.Val191CysfsTer71
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5211delC
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.571delG
  hgvsp: ENSP00000404775.1:p.Val191CysfsTer71
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.961delG
  hgvsp: ENSP00000388537.2:p.Val321CysfsTer71
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-24delG
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1048delG
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5562
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7629
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val390CysfsTer71
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: AC
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

2-26536742-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536742
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536742
    reference: chr 2
allele count: 1
allele frequency: 8.259957378619926e-6
allele num: 121066
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1042T>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5217A>G
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-30T>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.565T>C
  hgvsp: ENSP00000327396.6:p.Cys189Arg
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1162T>C
  hgvsp: ENSP00000307831.1:p.Cys388Arg
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.955T>C
  hgvsp: ENSP00000388537.2:p.Cys319Arg
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.565T>C
  hgvsp: ENSP00000404775.1:p.Cys189Arg
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.144T>C
  hgvsp: ENST00000435303.1:c.144T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5558
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4957
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1935
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Cys388Arg
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-26536745-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536745
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536745
    reference: chr 2
allele count: 7
allele frequency: 5.782447792757071e-5
allele num: 121056
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-33C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.562C>T
  hgvsp: ENSP00000327396.6:p.Gln188Ter
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1159C>T
  hgvsp: ENSP00000307831.1:p.Gln387Ter
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.562C>T
  hgvsp: ENSP00000404775.1:p.Gln188Ter
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5220G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1039C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.952C>T
  hgvsp: ENSP00000388537.2:p.Gln318Ter
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.141C>T
  hgvsp: ENST00000435303.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41081
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1964
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2015
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln387Ter
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

2-26536747-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536747
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536747
    reference: chr 2
allele count: 1
allele frequency: 8.261322141995606e-6
allele num: 121046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5222G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1157C>T
  hgvsp: ENSP00000307831.1:p.Ser386Phe
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.560C>T
  hgvsp: ENSP00000404775.1:p.Ser187Phe
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.560C>T
  hgvsp: ENSP00000327396.6:p.Ser187Phe
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.950C>T
  hgvsp: ENSP00000388537.2:p.Ser317Phe
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.139C>T
  hgvsp: ENSP00000394162.1:p.Leu47Phe
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1037C>T
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2814
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser386Phe
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

2-26536747-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536747
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536747
    reference: chr 2
allele count: 1
allele frequency: 8.261322141995606e-6
allele num: 121046
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.139C>G
  hgvsp: ENSP00000394162.1:p.Leu47Val
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1037C>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-35C>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.950C>G
  hgvsp: ENSP00000388537.2:p.Ser317Cys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1157C>G
  hgvsp: ENSP00000307831.1:p.Ser386Cys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.560C>G
  hgvsp: ENSP00000327396.6:p.Ser187Cys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.560C>G
  hgvsp: ENSP00000404775.1:p.Ser187Cys
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5222G>C
  variant of: http://identifiers.org/hgnc/29361
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7613
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2015
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser386Cys
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-26536747-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536747
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536747
    reference: chr 2
allele count: 4
allele frequency: 3.304528856798242e-5
allele num: 121046
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1037C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.139C>A
  hgvsp: ENSP00000394162.1:p.Leu47Ile
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.950C>A
  hgvsp: ENSP00000388537.2:p.Ser317Tyr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.560C>A
  hgvsp: ENSP00000404775.1:p.Ser187Tyr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.560C>A
  hgvsp: ENSP00000327396.6:p.Ser187Tyr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1157C>A
  hgvsp: ENSP00000307831.1:p.Ser386Tyr
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-35C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5222G>T
  variant of: http://identifiers.org/hgnc/29361
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2814
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1936
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser386Tyr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

2-26536748-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536748
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536748
    reference: chr 2
allele count: 1
allele frequency: 8.261731658955718e-6
allele num: 121040
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.138T>C
  hgvsp: ENST00000435303.1:c.138T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.559T>C
  hgvsp: ENSP00000327396.6:p.Ser187Pro
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.949T>C
  hgvsp: ENSP00000388537.2:p.Ser317Pro
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.559T>C
  hgvsp: ENSP00000404775.1:p.Ser187Pro
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1036T>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-36T>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1156T>C
  hgvsp: ENSP00000307831.1:p.Ser386Pro
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5223A>G
  variant of: http://identifiers.org/hgnc/29361
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5129
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5562
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2015
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser386Pro
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

2-26536757-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536757
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536757
    reference: chr 2
allele count: 1
allele frequency: 8.265009256810368e-6
allele num: 120992
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.129G>C
  hgvsp: ENST00000435303.1:c.129G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-45G>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1027G>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.940G>C
  hgvsp: ENSP00000388537.2:p.Glu314Gln
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1147G>C
  hgvsp: ENSP00000307831.1:p.Glu383Gln
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5232C>G
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.550G>C
  hgvsp: ENSP00000404775.1:p.Glu184Gln
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.550G>C
  hgvsp: ENSP00000327396.6:p.Glu184Gln
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4952
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41078
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2801
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu383Gln
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-26536758-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536758
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536758
    reference: chr 2
allele count: 22
allele frequency: 1.818572585844892e-4
allele num: 120974
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-46C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.549C>T
  hgvsp: ENST00000447444.1:c.549C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1026C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.128C>T
  hgvsp: ENSP00000394162.1:p.Thr43Met
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.549C>T
  hgvsp: ENST00000333478.6:c.549C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.939C>T
  hgvsp: ENST00000421160.2:c.939C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5233G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1146C>T
  hgvsp: ENST00000311519.1:c.1146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4951
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5561
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5129
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2011
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr43Met
num of homozygotes: 1
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

2-26536764-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536764
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536764
    reference: chr 2
allele count: 1
allele frequency: 8.268562923763849e-6
allele num: 120940
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1140C>G
  hgvsp: ENST00000311519.1:c.1140C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1020C>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.543C>G
  hgvsp: ENST00000447444.1:c.543C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.543C>G
  hgvsp: ENST00000333478.6:c.543C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.933C>G
  hgvsp: ENST00000421160.2:c.933C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5239G>C
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.122C>G
  hgvsp: ENSP00000394162.1:p.Pro41Arg
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-52C>G
  variant of: http://identifiers.org/hgnc/18989
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4952
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5558
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7493
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro41Arg
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD

2-26536766-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536766
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536766
    reference: chr 2
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.120T>C
  hgvsp: ENST00000435303.1:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-54T>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5241A>G
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1018T>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.931T>C
  hgvsp: ENSP00000388537.2:p.Ser311Pro
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.541T>C
  hgvsp: ENSP00000327396.6:p.Ser181Pro
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.541T>C
  hgvsp: ENSP00000404775.1:p.Ser181Pro
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1138T>C
  hgvsp: ENSP00000307831.1:p.Ser380Pro
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4028
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5558
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4951
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser380Pro
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP

2-26536768-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536768
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536768
    reference: chr 2
allele count: 1
allele frequency: 8.270751315049459e-6
allele num: 120908
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5243G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1136C>T
  hgvsp: ENSP00000307831.1:p.Ser379Phe
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.118C>T
  hgvsp: ENSP00000394162.1:p.Pro40Ser
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.539C>T
  hgvsp: ENSP00000404775.1:p.Ser180Phe
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.929C>T
  hgvsp: ENSP00000388537.2:p.Ser310Phe
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1016C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-56C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.539C>T
  hgvsp: ENSP00000327396.6:p.Ser180Phe
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser379Phe
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

2-26536784-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536784
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536784
    reference: chr 2
allele count: 1
allele frequency: 8.279927799029592e-6
allele num: 120774
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-59-13G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.115-13G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.536-13G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.536-13G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5259C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1013-13G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.926-13G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1133-13G>A
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5558
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2006
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1915
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

2-26536785-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536785
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536785
    reference: chr 2
allele count: 4
allele frequency: 3.312190517198549e-5
allele num: 120766
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.115-14C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1013-14C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.536-14C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.926-14C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-59-14C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5260G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1133-14C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.536-14C>T
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5622
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4935
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7082
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1905
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2657
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

2-26536797-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536797
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536797
    reference: chr 2
allele count: 1
allele frequency: 8.286102548805144e-6
allele num: 120684
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.115-26A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.926-26A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.536-26A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1133-26A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.536-26A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1013-26A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5272T>C
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-59-26A>G
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5557
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4932
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2575
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6436
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

2-26536803-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536803
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536803
    reference: chr 2
allele count: 1
allele frequency: 8.288300235387727e-6
allele num: 120652
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.115-32A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.926-32A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1013-32A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1133-32A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.536-32A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5278T>C
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-59-32A>G
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.536-32A>G
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5557
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

2-26536812-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26536812
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26536812
    reference: chr 2
allele count: 1
allele frequency: 8.298341991270144e-6
allele num: 120506
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-59-41C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.536-41C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5287G>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1013-41C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.926-41C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.115-41C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.536-41C>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1133-41C>A
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5558
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5558
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1881
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

2-26537237-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26537237
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26537236
    reference: chr 2
allele count: 1
allele frequency: 9.505342002205239e-6
allele num: 105204
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-59-467delG
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5717delC
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1132+44delG
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.925+44delG
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1012+44delG
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.535+44delG
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.535+44delG
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.115-467delG
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 12740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11528
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6276
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5407
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3070
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3206
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: GC
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

2-26537238-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26537238
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26537238
    reference: chr 2
allele count: 1
allele frequency: 9.497397713026631e-6
allele num: 105292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.115-467G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5713C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.535+44G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1132+44G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-59-467G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.535+44G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1012+44G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.925+44G>A
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7187
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10720
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17272
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3162
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1794
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-26537255-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26537255
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26537255
    reference: chr 2
allele count: 1
allele frequency: 9.149130832570906e-6
allele num: 109300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-59-484G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.535+27G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.115-484G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5730C>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.925+27G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1012+27G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.535+27G>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1132+27G>T
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5377
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5656
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-26537256-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26537256
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26537256
    reference: chr 2
allele count: 1
allele frequency: 9.116767558894318e-6
allele num: 109688
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.925+26G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1012+26G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5731C>T
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.115-485G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-59-485G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.535+26G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.535+26G>A
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1132+26G>A
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10777
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5533
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1927
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2011
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2240
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

2-26537258-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26537258
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26537258
    reference: chr 2
allele count: 1
allele frequency: 9.064539521392313e-6
allele num: 110320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.925+24G>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.535+24G>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1012+24G>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5733C>G
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.535+24G>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.115-487G>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1132+24G>C
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-59-487G>C
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-26537264-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26537264
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 26537264
    reference: chr 2
allele count: 1
allele frequency: 8.912179384346648e-6
allele num: 112206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138018
  ensembl protein: ENSP00000415280
  ensembl transcript: ENST00000442141
  gene symbol: EPT1
  hgvsc: ENST00000442141.1:c.-40+5739G>A
  variant of: http://identifiers.org/hgnc/29361
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl transcript: ENST00000459892
  gene symbol: GPR113
  hgvsc: ENST00000459892.1:n.1012+18C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000388537
  ensembl transcript: ENST00000421160
  gene symbol: GPR113
  hgvsc: ENST00000421160.2:c.925+18C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000404775
  ensembl transcript: ENST00000447444
  gene symbol: GPR113
  hgvsc: ENST00000447444.1:c.535+18C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000445729
  ensembl transcript: ENST00000541401
  gene symbol: GPR113
  hgvsc: ENST00000541401.1:c.-59-493C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000307831
  ensembl transcript: ENST00000311519
  gene symbol: GPR113
  hgvsc: ENST00000311519.1:c.1132+18C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000327396
  ensembl transcript: ENST00000333478
  gene symbol: GPR113
  hgvsc: ENST00000333478.6:c.535+18C>T
  variant of: http://identifiers.org/hgnc/18989
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000173567
  ensembl protein: ENSP00000394162
  ensembl transcript: ENST00000435303
  gene symbol: GPR113
  hgvsc: ENST00000435303.1:c.115-493C>T
  variant of: http://identifiers.org/hgnc/18989
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11858
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 1010
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1972
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18188
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3777
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1284
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3510
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 257
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9126
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.799467357662132e-5
allele num: 55572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12282
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.837e0

VQSLOD
type: SiteQuality
SIO_000300: 3.81e-1

QD
type: SiteQuality
SIO_000300: 1.061e1

FS
type: SiteQuality
SIO_000300: 4.32e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.67e-1

DP
type: SiteQuality
SIO_000300: 1.079646e6

MQRankSum
type: SiteQuality
SIO_000300: -8.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

GenotypeQuality
all individuals: 257
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3894
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1934
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24946
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9094
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.211240310077519e-4
allele num: 8256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4742
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e-1

MQ
type: SiteQuality
SIO_000300: 5.739e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

QD
type: SiteQuality
SIO_000300: 2.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

DP
type: SiteQuality
SIO_000300: 1.069967e6

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.59e0

GenotypeQuality
all individuals: 398
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4217
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4488
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21642
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 665
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54490
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.229407425620851e-4
allele num: 8134
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7128
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8872
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11932
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-2

MQRankSum
type: SiteQuality
SIO_000300: -8.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.087e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

QD
type: SiteQuality
SIO_000300: 1.279e1

MQ
type: SiteQuality
SIO_000300: 5.925e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.747e0

DP
type: SiteQuality
SIO_000300: 1.028305e6

GenotypeQuality
all individuals: 824
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6789
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6234
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 329
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 321
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10740
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 874
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1098
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10924
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 1.041046995835812e-3
allele num: 6724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51828
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.280737704918033e-4
allele num: 7808
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.5625e-3
allele num: 640
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

FS
type: SiteQuality
SIO_000300: 1.189e0

DP
type: SiteQuality
SIO_000300: 9.00613e5

VQSLOD
type: SiteQuality
SIO_000300: -9.45e-2

QD
type: SiteQuality
SIO_000300: 7.81e0

GenotypeQuality
all individuals: 6230
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1458
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 904
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11443
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6781
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3554
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11008
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.92975685063682e-5
allele num: 51820
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.98902e5

VQSLOD
type: SiteQuality
SIO_000300: -2.29e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

QD
type: SiteQuality
SIO_000300: 4.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.422e0

GenotypeQuality
all individuals: 1555
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 760
bin: 9.75e1
variant carriers: 200

GenotypeQuality
all individuals: 494
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 241
bin: 8.25e1
variant carriers: 5

GenotypeQuality
all individuals: 371
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2031
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6581
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4232
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1131
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 160
bin: 9.25e1
variant carriers: 6

GenotypeQuality
all individuals: 23417
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7531
bin: 3.25e1
variant carriers: 1

Latino
type: Population
allele count: 23
allele frequency: 2.877877877877878e-3
allele num: 7992
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 5.834305717619603e-4
allele num: 10284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 4.84027105517909e-4
allele num: 4132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 185
allele frequency: 3.677055175703609e-3
allele num: 50312
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.950487226757967e-4
allele num: 7594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e0

DP
type: SiteQuality
SIO_000300: 8.52297e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

MQRankSum
type: SiteQuality
SIO_000300: 2.49e-1

FS
type: SiteQuality
SIO_000300: 5.93e-1

QD
type: SiteQuality
SIO_000300: 1.232e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 915
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1361
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2046
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6600
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8135
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 913
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4196
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.993779408246272e-5
allele num: 50156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7970
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.465e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

QD
type: SiteQuality
SIO_000300: 7.54e0

MQ
type: SiteQuality
SIO_000300: 5.883e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.93e-1

DP
type: SiteQuality
SIO_000300: 8.49252e5

GenotypeQuality
all individuals: 734
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3033
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21139
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8255
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2234
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4145
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7200
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46842
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5806
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.572e1

VQSLOD
type: SiteQuality
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MQRankSum
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QD
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 7.90124e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6872
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 3720
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.430205949656751e-4
allele num: 6992
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5562
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 6.563976894801331e-5
allele num: 45704
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-2

VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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FS
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QD
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 7.83202e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5528
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 45408
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.473622163277336e-4
allele num: 6786
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.893518518518518e-4
allele num: 6912
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9136
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3676
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 526
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.84803e5

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

FS
type: SiteQuality
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BaseQRankSum
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VQSLOD
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MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10978
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64096
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.253908692933083e-5
allele num: 15990
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8326
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6204
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.439058e6

InbreedingCoeff
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SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.826e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 2.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.72e-1

QD
type: SiteQuality
SIO_000300: 3.077e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10984
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.006823198876179e-4
allele num: 9966
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8330
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16034
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6222
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.197e0

InbreedingCoeff
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SIO_000300: -1.1e-3

QD
type: SiteQuality
SIO_000300: 1.002e1

VQSLOD
type: SiteQuality
SIO_000300: -8.56e-2

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.97e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.449462e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16052
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9986
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6236
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11020
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553470452991984e-5
allele num: 64372
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.398e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.0e0

FS
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 1.002004008016032e-4
allele num: 9980
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8344
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6248
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64400
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.2e-2

QD
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.49487e6

BaseQRankSum
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.550964700043427e-5
allele num: 64476
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.010632546404758e-5
allele num: 11098
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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African
type: Population
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.548467017652524e-5
allele num: 64580
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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QD
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ClippingRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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FS
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DP
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 3.054087896649666e-5
allele num: 65486
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0098e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: 3.0e-4

QD
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DP
type: SiteQuality
SIO_000300: 1.630096e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.41e-1

ClippingRankSum
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SIO_000300: 7.2e-1

MQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: -1.127e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65600
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.168497312456181e-4
allele num: 8558
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-2

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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SIO_000300: 0.0e0

QD
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SIO_000300: 1.106e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.166588894073728e-4
allele num: 8572
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65724
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
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MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 7.54e-1

InbreedingCoeff
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SIO_000300: 5.999999999999999e-4

FS
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -3.1e-2

DP
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQRankSum
type: SiteQuality
SIO_000300: 5.26e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
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allele count: 19
allele frequency: 2.886485172581429e-4
allele num: 65824
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.651936e6

BaseQRankSum
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SIO_000300: -1.98e0

QD
type: SiteQuality
SIO_000300: 1.116e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 4.788e0

MQRankSum
type: SiteQuality
SIO_000300: 2.07e-1

ClippingRankSum
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SIO_000300: -8.799999999999999e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.727526618956188e-5
allele num: 11458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513912859175826e-5
allele num: 66054
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.948178453146308e-4
allele num: 10266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
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MQ
type: SiteQuality
SIO_000300: 5.913e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.664845e6

QD
type: SiteQuality
SIO_000300: 1.241e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

Other
type: Population
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allele num: 890
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Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6492
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66106
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.511213201958532e-5
allele num: 66172
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11482
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6506
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African
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allele frequency: 0.0e0
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Other
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MQRankSum
type: SiteQuality
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FS
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DP
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ClippingRankSum
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VQSLOD
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QD
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InbreedingCoeff
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MQ
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66230
num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

European (Finnish)
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Other
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allele num: 894
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South Asian
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MQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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InbreedingCoeff
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FS
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QD
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DP
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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African
type: Population
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11500
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508705229172324e-5
allele num: 66282
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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FS
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MQ
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.147e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.42e0

FS
type: SiteQuality
SIO_000300: 4.887e0

MQRankSum
type: SiteQuality
SIO_000300: 4.71e-1

DP
type: SiteQuality
SIO_000300: 1.69143e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.49e-1

QD
type: SiteQuality
SIO_000300: 2.571e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2122
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 159
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variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.313743637204998e-4
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: -2.307e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-2

DP
type: SiteQuality
SIO_000300: 1.694345e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.269e0

QD
type: SiteQuality
SIO_000300: 2.615e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 2132
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

QD
type: SiteQuality
SIO_000300: 1.562e1

FS
type: SiteQuality
SIO_000300: 4.034e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

VQSLOD
type: SiteQuality
SIO_000300: 5.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.696893e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.652e0

GenotypeQuality
all individuals: 88
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5999
bin: 9.75e1
variant carriers: 11

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66468
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.272264631043257e-3
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.319e1

DP
type: SiteQuality
SIO_000300: 1.698084e6

FS
type: SiteQuality
SIO_000300: 1.171e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.856e0

MQRankSum
type: SiteQuality
SIO_000300: 1.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.05e0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6025
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GenotypeQuality
all individuals: 5577
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.23e-1

QD
type: SiteQuality
SIO_000300: 2.68e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.099e0

MQ
type: SiteQuality
SIO_000300: 5.722e1

DP
type: SiteQuality
SIO_000300: 1.700187e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.073e0

GenotypeQuality
all individuals: 47
bin: 2.25e1
variant carriers: 20

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 48

GenotypeQuality
all individuals: 32
bin: 2.5e0
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GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 14

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 20

GenotypeQuality
all individuals: 3110
bin: 6.25e1
variant carriers: 115

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 64

GenotypeQuality
all individuals: 87
bin: 3.75e1
variant carriers: 67

GenotypeQuality
all individuals: 63
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variant carriers: 50

GenotypeQuality
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GenotypeQuality
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variant carriers: 52433

GenotypeQuality
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variant carriers: 290

GenotypeQuality
all individuals: 90
bin: 5.25e1
variant carriers: 74

GenotypeQuality
all individuals: 607
bin: 8.25e1
variant carriers: 210

European (Non-Finnish)
type: Population
allele count: 46140
allele frequency: 6.92751186114948e-1
allele num: 66604
num of homozygotes: 16023

East Asian
type: Population
allele count: 6223
allele frequency: 7.215909090909091e-1
allele num: 8624
num of homozygotes: 2258

South Asian
type: Population
allele count: 9154
allele frequency: 5.545190210806882e-1
allele num: 16508
num of homozygotes: 2586

Latino
type: Population
allele count: 8219
allele frequency: 7.114785318559557e-1
allele num: 11552
num of homozygotes: 2927

European (Finnish)
type: Population
allele count: 4504
allele frequency: 6.824242424242424e-1
allele num: 6600
num of homozygotes: 1540

Other
type: Population
allele count: 592
allele frequency: 6.548672566371682e-1
allele num: 904
num of homozygotes: 185

African
type: Population
allele count: 7064
allele frequency: 6.806706494507613e-1
allele num: 10378
num of homozygotes: 2410

FS
type: SiteQuality
SIO_000300: 1.195e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.09e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 4.66e0

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.14e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

QD
type: SiteQuality
SIO_000300: 2.363e1

DP
type: SiteQuality
SIO_000300: 3.927536e6

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11
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GenotypeQuality
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GenotypeQuality
all individuals: 1969
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variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 108
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GenotypeQuality
all individuals: 1913
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variant carriers: 0

GenotypeQuality
all individuals: 7165
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.003634397621121e-5
allele num: 66586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.27e-1

QD
type: SiteQuality
SIO_000300: 1.404e1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.491e0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

FS
type: SiteQuality
SIO_000300: 9.29e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

DP
type: SiteQuality
SIO_000300: 3.277095e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-1

GenotypeQuality
all individuals: 1265
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
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GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 107
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GenotypeQuality
all individuals: 6
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1969
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variant carriers: 0

GenotypeQuality
all individuals: 1934
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GenotypeQuality
all individuals: 75
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 97
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GenotypeQuality
all individuals: 1915
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.007268795242243e-5
allele num: 66586
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.42e1

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 9.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e0

DP
type: SiteQuality
SIO_000300: 3.277038e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

FS
type: SiteQuality
SIO_000300: 1.259e0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
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GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 90
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GenotypeQuality
all individuals: 166
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GenotypeQuality
all individuals: 1969
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GenotypeQuality
all individuals: 1416
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 1910
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GenotypeQuality
all individuals: 41516
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variant carriers: 1

GenotypeQuality
all individuals: 1928
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variant carriers: 0

GenotypeQuality
all individuals: 2773
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50195253829979e-5
allele num: 66580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.15e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

DP
type: SiteQuality
SIO_000300: 3.277022e6

QD
type: SiteQuality
SIO_000300: 1.703e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-1

GenotypeQuality
all individuals: 2773
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41516
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1416
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1969
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1928
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.314279102059708e-4
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.277022e6

QD
type: SiteQuality
SIO_000300: 1.703e1

MQRankSum
type: SiteQuality
SIO_000300: 8.37e-1

GenotypeQuality
all individuals: 1262
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41521
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 1417
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1923
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7252
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.003814844852963e-5
allele num: 66582
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 1.062596599690881e-3
allele num: 10352
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

DP
type: SiteQuality
SIO_000300: 3.277028e6

MQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.98e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

FS
type: SiteQuality
SIO_000300: 5.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.2e-1

QD
type: SiteQuality
SIO_000300: 1.514e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

GenotypeQuality
all individuals: 7279
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1928
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1908
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41510
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1410
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2778
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQRankSum
type: SiteQuality
SIO_000300: 6.11e-1

FS
type: SiteQuality
SIO_000300: 7.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-1

QD
type: SiteQuality
SIO_000300: 1.319e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.63e-1

DP
type: SiteQuality
SIO_000300: 3.276833e6

VQSLOD
type: SiteQuality
SIO_000300: 3.08e-1

GenotypeQuality
all individuals: 1909
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1409
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41508
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1974
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1261
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1927
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501862309263487e-5
allele num: 66584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.063e1

MQRankSum
type: SiteQuality
SIO_000300: -1.733e0

MQ
type: SiteQuality
SIO_000300: 5.822e1

DP
type: SiteQuality
SIO_000300: 3.276749e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.625e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.516e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.56e-1

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7278
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2782
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1410
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41510
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1907
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1974
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501726986033939e-5
allele num: 66590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.938e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.51e-1

DP
type: SiteQuality
SIO_000300: 3.276715e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

QD
type: SiteQuality
SIO_000300: 1.362e1

FS
type: SiteQuality
SIO_000300: 5.621e0

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1924
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7298
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1905
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1406
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1976
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502223290469895e-5
allele num: 66568
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.25e-1

QD
type: SiteQuality
SIO_000300: 1.078e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.698e0

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

FS
type: SiteQuality
SIO_000300: 2.273e0

DP
type: SiteQuality
SIO_000300: 3.276961e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 1264
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7297
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2776
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1906
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1924
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502403846153846e-5
allele num: 66560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.79e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.53e-1

FS
type: SiteQuality
SIO_000300: 6.071e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.144e0

VQSLOD
type: SiteQuality
SIO_000300: -1.67e0

QD
type: SiteQuality
SIO_000300: 5.36e0

DP
type: SiteQuality
SIO_000300: 3.277113e6

MQRankSum
type: SiteQuality
SIO_000300: -1.12e-1

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2774
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1925
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1902
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1407
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41514
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502223290469895e-5
allele num: 66568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.445e0

DP
type: SiteQuality
SIO_000300: 3.276821e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.86e0

QD
type: SiteQuality
SIO_000300: 9.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.59e-1

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7294
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41513
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1976
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1926
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2769
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.17e0

DP
type: SiteQuality
SIO_000300: 3.276891e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.017e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

FS
type: SiteQuality
SIO_000300: 1.222e0

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.71e-1

QD
type: SiteQuality
SIO_000300: 1.124e1

GenotypeQuality
all individuals: 1926
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1902
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41513
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7294
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.900792883388126e-4
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.947e1

VQSLOD
type: SiteQuality
SIO_000300: 2.17e0

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.71e-1

DP
type: SiteQuality
SIO_000300: 3.276891e6

FS
type: SiteQuality
SIO_000300: 1.222e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.017e0

QD
type: SiteQuality
SIO_000300: 1.124e1

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1978
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1902
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7317
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41516
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1405
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2770
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818622696411251e-4
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.938e1

DP
type: SiteQuality
SIO_000300: 3.277034e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

FS
type: SiteQuality
SIO_000300: 1.287e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.32e0

QD
type: SiteQuality
SIO_000300: 1.196e1

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2730
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 202
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41888
bin: 9.75e1
variant carriers: 3034

GenotypeQuality
all individuals: 1377
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1223
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 7315
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1883
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 1

Other
type: Population
allele count: 19
allele frequency: 2.111111111111111e-2
allele num: 900
num of homozygotes: 1

African
type: Population
allele count: 415
allele frequency: 4.012763488686908e-2
allele num: 10342
num of homozygotes: 12

European (Finnish)
type: Population
allele count: 61
allele frequency: 9.225650332728373e-3
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 355
allele frequency: 2.151775972845194e-2
allele num: 16498
num of homozygotes: 8

East Asian
type: Population
allele count: 512
allele frequency: 5.927297985644825e-2
allele num: 8638
num of homozygotes: 12

European (Non-Finnish)
type: Population
allele count: 1598
allele frequency: 2.400913488987049e-2
allele num: 66558
num of homozygotes: 16

Latino
type: Population
allele count: 131
allele frequency: 1.133806473948416e-2
allele num: 11554
num of homozygotes: 1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.332e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

DP
type: SiteQuality
SIO_000300: 3.338795e6

MQRankSum
type: SiteQuality
SIO_000300: 1.54e-1

FS
type: SiteQuality
SIO_000300: 5.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.4e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.18e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-2

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1968
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2826
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41078
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1935
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1283
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7597
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66550
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.532e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.273e0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

DP
type: SiteQuality
SIO_000300: 3.260133e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQ
type: SiteQuality
SIO_000300: 6.003e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.72e-1

QD
type: SiteQuality
SIO_000300: 1.286e1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2827
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7621
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2014
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1969
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41076
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1283
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50271992306074e-5
allele num: 66546
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.82e0

MQRankSum
type: SiteQuality
SIO_000300: -1.012e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.357e0

FS
type: SiteQuality
SIO_000300: 8.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.481e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.942e1

DP
type: SiteQuality
SIO_000300: 3.26027e6

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2828
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1970
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1430
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1938
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41078
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1283
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.676795045480937e-5
allele num: 10334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

FS
type: SiteQuality
SIO_000300: 7.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.1e0

DP
type: SiteQuality
SIO_000300: 3.260199e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.64e-1

MQ
type: SiteQuality
SIO_000300: 6.075e1

QD
type: SiteQuality
SIO_000300: 1.19e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41079
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1429
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1282
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2817
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7635
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503036132988637e-5
allele num: 66532
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.906e1

FS
type: SiteQuality
SIO_000300: 7.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

DP
type: SiteQuality
SIO_000300: 3.260014e6

MQRankSum
type: SiteQuality
SIO_000300: -8.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.87e0

VQSLOD
type: SiteQuality
SIO_000300: -1.167e-1

QD
type: SiteQuality
SIO_000300: 1.088e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e-1

GenotypeQuality
all individuals: 93
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7628
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2813
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1282
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1424
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.018759018759019e-5
allele num: 66528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.260221e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.18e-1

QD
type: SiteQuality
SIO_000300: 1.21e1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.8e0

FS
type: SiteQuality
SIO_000300: 5.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.091e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503262078710802e-5
allele num: 66522
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.129e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.348e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
SIO_000300: 1.114e0

MQRankSum
type: SiteQuality
SIO_000300: 6.21e-1

DP
type: SiteQuality
SIO_000300: 3.259863e6

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
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allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.678668215253581e-5
allele num: 10332
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.21e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 3.259863e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e-1

QD
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SIO_000300: 1.129e1

FS
type: SiteQuality
SIO_000300: 1.114e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.348e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66522
num of homozygotes: 0

African
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allele count: 4
allele frequency: 3.871467286101432e-4
allele num: 10332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.259863e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 1.114e0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.56e-1

QD
type: SiteQuality
SIO_000300: 1.129e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.348e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503352476021528e-5
allele num: 66518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.78e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-2

QD
type: SiteQuality
SIO_000300: 9.65e0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

DP
type: SiteQuality
SIO_000300: 3.259707e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.47e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.0e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1933
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504030802550836e-5
allele num: 66488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
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MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

FS
type: SiteQuality
SIO_000300: 1.6284e1

QD
type: SiteQuality
SIO_000300: 2.65e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.917e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e-1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 21

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 22
allele frequency: 3.309465070100487e-4
allele num: 66476
num of homozygotes: 1

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.264e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.688044952528579e-5
allele num: 10322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66454
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504981488727689e-5
allele num: 66446
num of homozygotes: 0

Latino
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South Asian
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East Asian
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-1

FS
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2011
bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505117399157134e-5
allele num: 66440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 1.056e1

DP
type: SiteQuality
SIO_000300: 3.255464e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.348e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.701e-1

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.695559433779329e-5
allele num: 10314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.42e0

DP
type: SiteQuality
SIO_000300: 3.248692e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.57e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.003e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 1.056e1

QD
type: SiteQuality
SIO_000300: 1.922e1

MQRankSum
type: SiteQuality
SIO_000300: 8.67e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.85e-1

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.013409673045051e-5
allele num: 66370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.093845216331505e-5
allele num: 16410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.361e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.94e-1

DP
type: SiteQuality
SIO_000300: 3.247368e6

FS
type: SiteQuality
SIO_000300: 1.0415e1

VQSLOD
type: SiteQuality
SIO_000300: -9.089999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.292e1

MQ
type: SiteQuality
SIO_000300: 5.939e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1358
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507977199384745e-5
allele num: 66314
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.992e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.41e0

VQSLOD
type: SiteQuality
SIO_000300: 5.51e-1

QD
type: SiteQuality
SIO_000300: 1.181e1

MQRankSum
type: SiteQuality
SIO_000300: -8.26e-1

DP
type: SiteQuality
SIO_000300: 3.237567e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-3

MQ
type: SiteQuality
SIO_000300: 5.94e1

GenotypeQuality
all individuals: 1860
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 1268
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variant carriers: 0

GenotypeQuality
all individuals: 2005
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.08e-1

FS
type: SiteQuality
SIO_000300: 1.379e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.222e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

DP
type: SiteQuality
SIO_000300: 3.230995e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.376e0

QD
type: SiteQuality
SIO_000300: 1.286e1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16302
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-1

DP
type: SiteQuality
SIO_000300: 3.219887e6

FS
type: SiteQuality
SIO_000300: 1.267e0

MQRankSum
type: SiteQuality
SIO_000300: -4.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.483e0

VQSLOD
type: SiteQuality
SIO_000300: -1.231e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 497
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6026
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
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East Asian
type: Population
allele count: 1
allele frequency: 1.248751248751249e-4
allele num: 8008
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.37e-1

DP
type: SiteQuality
SIO_000300: 1.1538e6

MQRankSum
type: SiteQuality
SIO_000300: -5.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.126e1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.227e1

VQSLOD
type: SiteQuality
SIO_000300: 6.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.42e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6014
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 10510
num of homozygotes: 0

East Asian
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South Asian
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.650873311982039e-5
allele num: 60574
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.021e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.547e0

MQRankSum
type: SiteQuality
SIO_000300: 5.84e-1

DP
type: SiteQuality
SIO_000300: 1.161267e6

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.281e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.602564102564103e-5
allele num: 62400
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Other
type: Population
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num of homozygotes: 0

Latino
type: Population
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11210
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6186
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.983e0

DP
type: SiteQuality
SIO_000300: 1.336512e6

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.322e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.78e-2

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.824567596187787e-5
allele num: 11332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62552
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Other
type: Population
allele count: 0
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allele num: 788
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11022
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.16e-1

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.201e-1

DP
type: SiteQuality
SIO_000300: 1.3459e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e-1

QD
type: SiteQuality
SIO_000300: 1.802e1

FS
type: SiteQuality
SIO_000300: 2.287e0

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

GenotypeQuality
all individuals: 1852
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 149
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6346
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1980
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34350
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5299
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1434
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2283
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591393742639804e-5
allele num: 62838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11090
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.408e0

MQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

DP
type: SiteQuality
SIO_000300: 1.359187e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.77e-1

FS
type: SiteQuality
SIO_000300: 2.971e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.717e0

QD
type: SiteQuality
SIO_000300: 1.564e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e0