3-183558430-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183558430
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183558430
    reference: chr 3
allele count: 1
allele frequency: 8.599783285461207e-6
allele num: 116282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-2A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*292-2A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.695-2A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-2A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.58-2A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.132-2A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-2A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.98-2A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.758-2A>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38882
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1245
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
hgvs: c.758-2A>C
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

3-183558439-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183558439
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183558439
    reference: chr 3
allele count: 1
allele frequency: 8.681309141418526e-6
allele num: 115190
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-11T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*292-11T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-11T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.758-11T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.98-11T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.132-11T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.58-11T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.695-11T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-11T>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35746
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1155
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1160
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10377
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

3-183558445-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183558445
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183558445
    reference: chr 3
allele count: 23
allele frequency: 2.01323483071321e-4
allele num: 114244
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-17T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.758-17T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-17T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*292-17T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.695-17T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.98-17T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-17T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.58-17T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.132-17T>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15230
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5859
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13463
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13062
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2543
  bin: 9.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

3-183558460-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183558460
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183558460
    reference: chr 3
allele count: 2
allele frequency: 1.797817449616166e-5
allele num: 111246
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.758-32C>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-32C>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-32C>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.132-32C>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-32C>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*292-32C>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.695-32C>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.58-32C>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.98-32C>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7766
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10141
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19557
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16359
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3061
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4037
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4849
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

3-183558466-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183558466
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183558466
    reference: chr 3
allele count: 1
allele frequency: 9.356462508654729e-6
allele num: 106878
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-38A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.58-38A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-38A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*292-38A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.132-38A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-38A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.758-38A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.695-38A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.98-38A>T
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2389
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/3-183558470-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183558470
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183558470
    reference: chr 3
allele count: 3
allele frequency: 2.917096128041073e-5
allele num: 102842
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-42T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.695-42T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*292-42T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-42T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.98-42T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.758-42T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-42T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.58-42T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.132-42T>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7387
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14777
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4000
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7044
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21648
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

3-183558474-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183558474
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183558474
    reference: chr 3
allele count: 1
allele frequency: 1.063219001850001e-5
allele num: 94054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*292-46A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.132-46A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-46A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.98-46A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.58-46A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-46A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.758-46A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-46A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.695-46A>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8897
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17047
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14304
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3045
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1730
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6229
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

3-183558475-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183558475
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183558475
    reference: chr 3
allele count: 3
allele frequency: 3.214125008035312e-5
allele num: 93338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-47C>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-47C>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.132-47C>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.98-47C>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*292-47C>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-47C>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.758-47C>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.58-47C>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.695-47C>A
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14107
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17081
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17651
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2592
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3794
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6212
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3091
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

3-183558478-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183558478
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183558478
    reference: chr 3
allele count: 1
allele frequency: 1.19283345659279e-5
allele num: 83834
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-50A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.58-50A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.758-50A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.132-50A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-50A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*292-50A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.695-50A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-50A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.98-50A>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10376
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17249
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12813
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6534
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5751
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2501
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12955
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

3-183558480-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183558480
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183558480
    reference: chr 3
allele count: 407
allele frequency: 1.666939711664482e-2
allele num: 24416
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.695-52T>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-52T>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-52T>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.132-52T>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.758-52T>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*292-52T>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-52T>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.98-52T>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.58-52T>A
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3142
  bin: 2.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 2.25e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12260
  bin: 1.75e1
  variant carriers: 212
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11467
  bin: 7.5e0
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 3.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 17854
  bin: 1.25e1
  variant carriers: 290
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 3.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 5.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 4122
  bin: 2.25e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5787
  bin: 7.5e0
  variant carriers: 122
genotype quality: GenotypeQuality
  all individuals: 32242
  bin: 2.5e0
  variant carriers: 109
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 9.25e1
  variant carriers: 4
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS

3-183560036-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560036
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560036
    reference: chr 3
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1608A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.757+50A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.694+50A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.57+50A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.97+50A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*291+50A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1608A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1608A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.131+50A>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31935
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

3-183560044-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560044
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560044
    reference: chr 3
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1616T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.131+42T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1616T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.97+42T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.757+42T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*291+42T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1616T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.694+42T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.57+42T>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31935
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ

3-183560045-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560045
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560045
    reference: chr 3
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1617C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1617C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.97+41C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1617C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.757+41C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.57+41C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.694+41C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*291+41C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.131+41C>T
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31935
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50177
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

3-183560050-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560050
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560050
    reference: chr 3
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1622A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.757+36A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.694+36A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.131+36A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.97+36A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*291+36A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1622A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.57+36A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1622A>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31935
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3415
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP

3-183560054-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560054
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560054
    reference: chr 3
allele count: 4
allele frequency: 3.295055768818887e-5
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.97+32G>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1626G>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1626G>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.131+32G>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.757+32G>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.57+32G>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*291+32G>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.694+32G>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1626G>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31934
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

3-183560055-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560055
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560055
    reference: chr 3
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*291+31A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.97+31A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1627A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.131+31A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.757+31A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1627A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.694+31A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1627A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.57+31A>T
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31933
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3456
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

3-183560061-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560061
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560060
    reference: chr 3
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.757+24delC
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1634delC
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.694+24delC
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.97+24delC
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1634delC
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*291+24delC
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1634delC
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.131+24delC
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.57+24delC
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31932
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: AG
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

3-183560065-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560065
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560065
    reference: chr 3
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.57+21G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.757+21G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.694+21G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1637G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1637G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1637G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*291+21G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.97+21G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.131+21G>A
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31932
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50181
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

3-183560067-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560067
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560067
    reference: chr 3
allele count: 2
allele frequency: 1.647500741375333e-5
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.57+19G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.131+19G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.97+19G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1639G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1639G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.694+19G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.757+19G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1639G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*291+19G>A
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31931
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

3-183560069-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560069
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560069
    reference: chr 3
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1641T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*291+17T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.57+17T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.757+17T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.97+17T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.694+17T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1641T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.131+17T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1641T>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31931
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2744
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum

3-183560072-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560072
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560072
    reference: chr 3
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1644A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.97+14A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.131+14A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.694+14A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*291+14A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1644A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.757+14A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.57+14A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1644A>T
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31930
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3501
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-183560076-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560076
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560076
    reference: chr 3
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.757+10T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.694+10T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.57+10T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1648T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.97+10T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.131+10T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1648T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1648T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*291+10T>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/3-183560079-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560079
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560079
    reference: chr 3
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*291+7T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1651T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1651T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.131+7T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.694+7T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.97+7T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1651T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.57+7T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.757+7T>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50182
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 7.75e1
  variant carriers: 0
hgvs: c.757+7T>G
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: A
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

3-183560093-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560093
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560093
    reference: chr 3
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.124A>G
  hgvsp: ENST00000417784.1:c.124A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.687A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.90A>G
  hgvsp: ENST00000450375.1:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1665A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.750A>G
  hgvsp: ENST00000317096.4:c.750A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1665A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.50A>G
  hgvsp: ENST00000418450.1:c.50A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*284A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1665A>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31930
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu250Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-183560096-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560096
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560096
    reference: chr 3
allele count: 6
allele frequency: 4.942176534545814e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1668C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*281C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.747C>T
  hgvsp: ENST00000317096.4:c.747C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1668C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.684C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.121C>T
  hgvsp: ENST00000417784.1:c.121C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.87C>T
  hgvsp: ENST00000450375.1:c.87C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.47C>T
  hgvsp: ENST00000418450.1:c.47C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1668C>T
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31929
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr249Tyr
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

3-183560103-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560103
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560103
    reference: chr 3
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.40C>T
  hgvsp: ENSP00000392926.1:p.Ala14Val
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.114C>T
  hgvsp: ENSP00000398043.1:p.Ala39Val
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.80C>T
  hgvsp: ENSP00000402689.1:p.Ala27Val
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.677C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1675C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.740C>T
  hgvsp: ENSP00000325421.4:p.Ala247Val
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1675C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*274C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1675C>T
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31927
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50182
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala247Val
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

3-183560105-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560105
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560105
    reference: chr 3
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*272G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1677G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1677G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.38G>A
  hgvsp: ENSP00000392926.1:p.Met13Ile
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.112G>A
  hgvsp: ENSP00000398043.1:p.Met38Ile
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.738G>A
  hgvsp: ENSP00000325421.4:p.Met246Ile
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1677G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.78G>A
  hgvsp: ENSP00000402689.1:p.Met26Ile
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.675G>A
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31927
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3515
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met246Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-183560106-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560106
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560106
    reference: chr 3
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.77T>C
  hgvsp: ENSP00000402689.1:p.Met26Thr
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.737T>C
  hgvsp: ENSP00000325421.4:p.Met246Thr
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1678T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*271T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.111T>C
  hgvsp: ENSP00000398043.1:p.Met38Thr
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1678T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.37T>C
  hgvsp: ENSP00000392926.1:p.Met13Thr
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1678T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.674T>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31927
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Met246Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

3-183560111-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560111
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560111
    reference: chr 3
allele count: 103
allele frequency: 8.484069717636981e-4
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.106G>A
  hgvsp: ENST00000417784.1:c.106G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.72G>A
  hgvsp: ENST00000450375.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1683G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.669G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000392926
  ensembl transcript: ENST00000418450
  gene symbol: PARL
  hgvsc: ENST00000418450.1:c.32G>A
  hgvsp: ENST00000418450.1:c.32G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.732G>A
  hgvsp: ENST00000317096.4:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1683G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*266G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1683G>A
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31933
  bin: 9.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln244Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ

3-183560145-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560145
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560145
    reference: chr 3
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*232C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.38C>T
  hgvsp: ENSP00000402689.1:p.Ser13Phe
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1717C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1717C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.72C>T
  hgvsp: ENSP00000398043.1:p.Ser25Phe
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.635C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.698C>T
  hgvsp: ENSP00000325421.4:p.Ser233Phe
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1717C>T
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31879
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1196
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser233Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

3-183560155-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560155
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560155
    reference: chr 3
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1727T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*222T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.28T>C
  hgvsp: ENSP00000402689.1:p.Trp10Arg
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1727T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.625T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.688T>C
  hgvsp: ENSP00000325421.4:p.Trp230Arg
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.62T>C
  hgvsp: ENSP00000398043.1:p.Trp22Arg
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1727T>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31878
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3468
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Trp230Arg
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD

3-183560165-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560165
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560165
    reference: chr 3
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.52G>A
  hgvsp: ENSP00000398043.1:p.Met18Ile
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.18G>A
  hgvsp: ENSP00000402689.1:p.Met6Ile
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.678G>A
  hgvsp: ENSP00000325421.4:p.Met226Ile
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1737G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1737G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1737G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*212G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.615G>A
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31877
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Met226Ile
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

3-183560166-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560166
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560166
    reference: chr 3
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1738T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1738T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1738T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.677T>C
  hgvsp: ENSP00000325421.4:p.Met226Thr
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.51T>C
  hgvsp: ENSP00000398043.1:p.Met18Thr
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*211T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.614T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.17T>C
  hgvsp: ENSP00000402689.1:p.Met6Thr
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31876
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3453
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Met226Thr
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

3-183560170-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560170
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560170
    reference: chr 3
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.673A>C
  hgvsp: ENSP00000325421.4:p.Asn225His
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.13A>C
  hgvsp: ENSP00000402689.1:p.Asn5His
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1742A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1742A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*207A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.610A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.47A>C
  hgvsp: ENSP00000398043.1:p.Asn17His
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1742A>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31876
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50157
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn225His
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

3-183560173-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560173
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560173
    reference: chr 3
allele count: 28
allele frequency: 2.306387044694486e-4
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*204G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.607G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1745G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.10G>A
  hgvsp: ENSP00000402689.1:p.Ala4Thr
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1745G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.670G>A
  hgvsp: ENSP00000325421.4:p.Ala224Thr
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-1G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1745G>A
  variant of: http://identifiers.org/hgnc/18253
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31886
  bin: 9.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3156
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
hgvs: c.45-1G>A
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

3-183560175-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560175
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560175
    reference: chr 3
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.8C>T
  hgvsp: ENSP00000402689.1:p.Ala3Val
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.668C>T
  hgvsp: ENSP00000325421.4:p.Ala223Val
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1747C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1747C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-3C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1747C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*202C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.605C>T
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31883
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala223Val
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

3-183560179-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560179
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560179
    reference: chr 3
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.601A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*198A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.4A>G
  hgvsp: ENSP00000402689.1:p.Met2Val
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1751A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.664A>G
  hgvsp: ENSP00000325421.4:p.Met222Val
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-7A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1751A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1751A>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31883
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Met222Val
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

3-183560179-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560179
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560179
    reference: chr 3
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*198A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.664A>C
  hgvsp: ENSP00000325421.4:p.Met222Leu
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1751A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402689
  ensembl transcript: ENST00000450375
  gene symbol: PARL
  hgvsc: ENST00000450375.1:c.4A>C
  hgvsp: ENSP00000402689.1:p.Met2Leu
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1751A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-7A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.601A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1751A>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31883
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Met222Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

3-183560187-AAGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560187
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560184
    reference: chr 3
allele count: 3
allele frequency: 2.471210398853358e-5
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.590_592delCCT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1762_608-1760delCCT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*187_*189delCCT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1762_348-1760delCCT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-18_45-16delCCT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.653_655delCCT
  hgvsp: ENSP00000325421.4:p.Ser218del
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1762_608-1760delCCT
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31884
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser218del
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: AAGG
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum

3-183560195-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560195
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560195
    reference: chr 3
allele count: 56817
allele frequency: 4.682925623104312e-1
allele num: 121328
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1767T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1767T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.585T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.648T>C
  hgvsp: ENST00000317096.4:c.648T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*182T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-23T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1767T>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 3.25e1
  variant carriers: 255
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 5.75e1
  variant carriers: 344
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 8.25e1
  variant carriers: 1319
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 4.75e1
  variant carriers: 242
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 4.25e1
  variant carriers: 263
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 5.25e1
  variant carriers: 265
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 2.75e1
  variant carriers: 216
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 7.25e1
  variant carriers: 740
genotype depth: GenotypeDepth
  all individuals: 34377
  bin: 9.75e1
  variant carriers: 33781
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 2.25e1
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 3.75e1
  variant carriers: 229
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 9.25e1
  variant carriers: 1859
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 7.75e1
  variant carriers: 1016
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 8.75e1
  variant carriers: 1541
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 501
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 6.25e1
  variant carriers: 403
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 8.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2841
  bin: 6.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 9.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 51718
  bin: 9.75e1
  variant carriers: 43062
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 2
hgvs: p.His216His
num of homozygotes: 13530
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-183560204-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560204
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560204
    reference: chr 3
allele count: 1
allele frequency: 8.244974687927709e-6
allele num: 121286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1776A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-32A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.576A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1776A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*173A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1776A>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.639A>T
  hgvsp: ENST00000317096.4:c.639A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2928
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5973
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4275
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4122
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4194
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27484
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Thr213Thr
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD

3-183560212-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560212
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560212
    reference: chr 3
allele count: 9
allele frequency: 7.424639904964609e-5
allele num: 121218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.568C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1784C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1784C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-40C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.631C>T
  hgvsp: ENST00000317096.4:c.631C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*165C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1784C>T
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10776
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4275
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5974
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3556
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11438
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5199
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4114
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu211Leu
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-183560218-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560218
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560218
    reference: chr 3
allele count: 1
allele frequency: 8.252595441266279e-6
allele num: 121174
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-46A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.562A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.348-1790A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.608-1790A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*159A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.608-1790A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.625A>G
  hgvsp: ENSP00000325421.4:p.Met209Val
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7322
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4184
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4113
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2280
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Met209Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

3-183560228-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560228
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560228
    reference: chr 3
allele count: 1
allele frequency: 8.265145879824779e-6
allele num: 120990
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1791T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-56T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1791T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1791T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.615T>C
  hgvsp: ENST00000317096.4:c.615T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.552T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*149T>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10705
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5973
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4109
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2270
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2050
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu205Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

3-183560231-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560231
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560231
    reference: chr 3
allele count: 1
allele frequency: 8.269246671628215e-6
allele num: 120930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.549C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1788C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1788C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.612C>T
  hgvsp: ENST00000317096.4:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*146C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-59C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1788C>T
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5971
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3557
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2265
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4107
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11168
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val204Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP

3-183560234-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560234
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560234
    reference: chr 3
allele count: 1
allele frequency: 8.273351534706709e-6
allele num: 120870
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1785G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*143G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-62G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1785G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.609G>A
  hgvsp: ENST00000317096.4:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1785G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.546G>A
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5970
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3557
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11115
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: c.609G>A
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/3-183560239-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560239
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560237
    reference: chr 3
allele count: 2
allele frequency: 1.655738790648387e-5
allele num: 120792
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.608-6_608-5delTT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*142-6_*142-5delTT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.545-6_545-5delTT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1778_347+1779delTT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1778_607+1779delTT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-69_45-68delTT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1778_607+1779delTT
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27459
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2257
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2049
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
hgvs: c.608-6_608-5delTT
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: CAA
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

3-183560240-AAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560240
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560238
    reference: chr 3
allele count: 1
allele frequency: 8.281573498964803e-6
allele num: 120750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*142-7_*142-6delCT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1777_347+1778delCT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-70_45-69delCT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.608-7_608-6delCT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1777_607+1778delCT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.545-7_545-6delCT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1777_607+1778delCT
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5970
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10912
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3554
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2254
  bin: 7.25e1
  variant carriers: 0
hgvs: c.608-7_608-6delCT
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: AAG
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

3-183560246-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560246
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560246
    reference: chr 3
allele count: 9
allele frequency: 7.461572899567229e-5
allele num: 120618
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1773C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1773C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*142-11C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.545-11C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1773C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-74C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.608-11C>T
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7991
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5013
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2245
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2048
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/3-183560249-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560249
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560249
    reference: chr 3
allele count: 1
allele frequency: 8.2936619835122e-6
allele num: 120574
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1770T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1770T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.608-14T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1770T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-77T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*142-14T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.545-14T>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2046
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5012
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4088
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

3-183560252-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560252
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560250
    reference: chr 3
allele count: 2
allele frequency: 1.659420530350801e-5
allele num: 120524
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1765_607+1766delAT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1765_347+1766delAT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-82_45-81delAT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*142-19_*142-18delAT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.545-19_545-18delAT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1765_607+1766delAT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.608-19_608-18delAT
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10555
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2044
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: CAT
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS

3-183560254-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560254
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560254
    reference: chr 3
allele count: 1
allele frequency: 8.300270588821196e-6
allele num: 120478
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1765A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-82A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1765A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1765A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.545-19A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*142-19A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.608-19A>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10468
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

3-183560256-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560256
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560256
    reference: chr 3
allele count: 2
allele frequency: 1.660798511924533e-5
allele num: 120424
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*142-21C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-84C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1763C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.545-21C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1763C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1763C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.608-21C>T
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7307
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4077
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4133
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

3-183560262-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560262
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560262
    reference: chr 3
allele count: 1
allele frequency: 8.317114959162966e-6
allele num: 120234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.545-27A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1757A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1757A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-90A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1757A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.608-27A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*142-27A>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4918
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10076
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3542
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

3-183560268-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560268
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560268
    reference: chr 3
allele count: 3
allele frequency: 2.499875006249687e-5
allele num: 120006
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1751A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*142-33A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1751A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1751A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.545-33A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.608-33A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-96A>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1272
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27425
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-183560271-AAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560271
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560269
    reference: chr 3
allele count: 1
allele frequency: 8.346130733791815e-6
allele num: 119816
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.545-38_545-37delGT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1746_607+1747delGT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-101_45-100delGT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*142-38_*142-37delGT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1746_347+1747delGT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.608-38_608-37delGT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1746_607+1747delGT
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5944
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8413
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3531
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4699
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4048
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: AAC
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/3-183560276-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560276
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560276
    reference: chr 3
allele count: 141
allele frequency: 1.199040767386091e-3
allele num: 117594
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-104T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*142-41T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1743T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1743T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1743T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.545-41T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.608-41T>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 9475
  bin: 3.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6328
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7192
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 8249
  bin: 3.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3028
  bin: 5.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 3.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 3440
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 4.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3933
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 7404
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 5.75e1
  variant carriers: 6
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

3-183560279-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560279
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560279
    reference: chr 3
allele count: 1
allele frequency: 8.387010198604401e-6
allele num: 119232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-107C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.608-44C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.545-44C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*142-44C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1740C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1740C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1740C>T
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8091
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5866
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3940
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7181
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27684
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3497
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

3-183560283-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560283
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560283
    reference: chr 3
allele count: 8
allele frequency: 6.722011225758747e-5
allele num: 119012
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1736T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-111T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1736T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*142-48T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.608-48T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1736T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.545-48T>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8175
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7883
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7119
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5333
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1328
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1535
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3993
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/3-183560286-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183560286
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183560286
    reference: chr 3
allele count: 1
allele frequency: 8.417650128790047e-6
allele num: 118798
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.545-51T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+1733T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.45-114T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.608-51T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+1733T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+1733T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*142-51T>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5850
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7748
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3673
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27687
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3757
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

3-183561970-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183561970
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183561970
    reference: chr 3
allele count: 1
allele frequency: 8.279927799029592e-6
allele num: 120774
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+49G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*141+49G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.607+49G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+49G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.44+49G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.544+49G>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+49G>A
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37230
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/3-183561980-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183561980
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183561980
    reference: chr 3
allele count: 1
allele frequency: 8.278693953241936e-6
allele num: 120792
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.544+39T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+39T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+39T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+39T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*141+39T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.607+39T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.44+39T>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6550
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37609
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8151
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-183561981-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183561981
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183561981
    reference: chr 3
allele count: 1
allele frequency: 8.278556881964336e-6
allele num: 120794
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.607+38A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*141+38A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.44+38A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+38A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.544+38A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+38A>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+38A>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8152
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37607
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/3-183561997-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183561997
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183561997
    reference: chr 3
allele count: 3
allele frequency: 2.481718010654843e-5
allele num: 120884
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.44+22T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.544+22T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+22T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*141+22T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+22T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+22T>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.607+22T>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2040
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37937
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

3-183561997-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183561997
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183561997
    reference: chr 3
allele count: 2
allele frequency: 1.654478673769895e-5
allele num: 120884
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+22T>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.544+22T>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.44+22T>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+22T>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*141+22T>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.607+22T>A
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+22T>A
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2040
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2415
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

3-183562000-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183562000
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183562000
    reference: chr 3
allele count: 4
allele frequency: 3.307698668651286e-5
allele num: 120930
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+19A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+19A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.544+19A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+19A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.607+19A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*141+19A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.44+19A>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6734
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1485
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8172
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

3-183562007-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183562007
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183562007
    reference: chr 3
allele count: 1
allele frequency: 8.262277744728666e-6
allele num: 121032
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.607+12T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.44+12T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.544+12T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.347+12T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.607+12T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.607+12T>C
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*141+12T>C
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

3-183562020-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183562020
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183562020
    reference: chr 3
allele count: 7
allele frequency: 5.778438170711573e-5
allele num: 121140
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.346A>G
  hgvsp: ENST00000449306.1:c.346A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.543A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.43A>G
  hgvsp: ENST00000417784.1:c.43A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*140A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.606A>G
  hgvsp: ENST00000311101.5:c.606A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.606A>G
  hgvsp: ENST00000435888.1:c.606A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.606A>G
  hgvsp: ENST00000317096.4:c.606A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22803
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8187
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38228
  bin: 6.25e1
  variant carriers: 0
hgvs: c.606A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

3-183562033-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183562033
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183562033
    reference: chr 3
allele count: 2
allele frequency: 1.649783878311941e-5
allele num: 121228
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.593C>T
  hgvsp: ENSP00000402137.1:p.Ser198Leu
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*127C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.30C>T
  hgvsp: ENSP00000398043.1:p.Ser11Leu
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.593C>T
  hgvsp: ENSP00000325421.4:p.Ser198Leu
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.593C>T
  hgvsp: ENSP00000310676.5:p.Ser198Leu
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.530C>T
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.333C>T
  hgvsp: ENSP00000396691.1:p.Ser112Leu
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16277
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38299
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6537
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ser198Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

3-183562039-AAATATCTG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183562039
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183562031
    reference: chr 3
allele count: 2
allele frequency: 1.649566164098842e-5
allele num: 121244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.16_23delCAGATATT
  hgvsp: ENSP00000398043.1:p.Arg7HisfsTer47
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.516_523delCAGATATT
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.579_586delCAGATATT
  hgvsp: ENSP00000310676.5:p.Arg194HisfsTer18
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.319_326delCAGATATT
  hgvsp: ENSP00000396691.1:p.Arg108HisfsTer18
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.579_586delCAGATATT
  hgvsp: ENSP00000402137.1:p.Arg194HisfsTer18
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.579_586delCAGATATT
  hgvsp: ENSP00000325421.4:p.Arg194HisfsTer68
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38313
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6537
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg194HisfsTer68
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: AAATATCTG
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ

3-183562052-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 183562052
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 183562052
    reference: chr 3
allele count: 1
allele frequency: 8.247422680412371e-6
allele num: 121250
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000396691
  ensembl transcript: ENST00000449306
  gene symbol: PARL
  hgvsc: ENST00000449306.1:c.314A>G
  hgvsp: ENSP00000396691.1:p.Met106Val
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175193
  ensembl transcript: ENST00000488202
  gene symbol: PARL
  hgvsc: ENST00000488202.1:n.511A>G
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000398043
  ensembl transcript: ENST00000417784
  gene symbol: PARL
  hgvsc: ENST00000417784.1:c.11A>G
  hgvsp: ENSP00000398043.1:p.Met5Val
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000310676
  ensembl transcript: ENST00000311101
  gene symbol: PARL
  hgvsc: ENST00000311101.5:c.574A>G
  hgvsp: ENSP00000310676.5:p.Met192Val
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000325421
  ensembl transcript: ENST00000317096
  gene symbol: PARL
  hgvsc: ENST00000317096.4:c.574A>G
  hgvsp: ENSP00000325421.4:p.Met192Val
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000402137
  ensembl transcript: ENST00000435888
  gene symbol: PARL
  hgvsc: ENST00000435888.1:c.574A>G
  hgvsp: ENSP00000402137.1:p.Met192Val
  variant of: http://identifiers.org/hgnc/18253
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000175193
  ensembl protein: ENSP00000404421
  ensembl transcript: ENST00000421484
  gene symbol: PARL
  hgvsc: ENST00000421484.1:c.*108A>G
  variant of: http://identifiers.org/hgnc/18253
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Met192Val
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 446
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5281
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2553
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6894
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.576988582602662e-5
allele num: 63412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11208
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.066e1

MQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

FS
type: SiteQuality
SIO_000300: 6.293e0

VQSLOD
type: SiteQuality
SIO_000300: -3.77e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.59e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

DP
type: SiteQuality
SIO_000300: 1.667564e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

GenotypeQuality
all individuals: 2543
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4967
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11116
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.282985674792661e-5
allele num: 15916
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6346
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.95e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.132e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.009e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.60861e6

QD
type: SiteQuality
SIO_000300: 1.755e1

MQRankSum
type: SiteQuality
SIO_000300: 6.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.412e0

GenotypeQuality
all individuals: 279
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4388
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14728
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1118
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30323
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1971
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11040
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 22
allele frequency: 1.387837496845824e-3
allele num: 15852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.608906908646266e-5
allele num: 62154
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.574e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.93e-1

QD
type: SiteQuality
SIO_000300: 1.181e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

VQSLOD
type: SiteQuality
SIO_000300: 3.69e-1

DP
type: SiteQuality
SIO_000300: 1.536313e6

MQ
type: SiteQuality
SIO_000300: 5.919e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

GenotypeQuality
all individuals: 80
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22459
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1367
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 333
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9332
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.297136481963555e-5
allele num: 10756
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60352
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.417661404184315e-5
allele num: 15582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6166
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.358e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.043e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

DP
type: SiteQuality
SIO_000300: 1.36551e6

QD
type: SiteQuality
SIO_000300: 4.43e0

GenotypeQuality
all individuals: 2503
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5878
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2665
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6123
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2459
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22802
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.59877135726627e-5
allele num: 10418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8922
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6020
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

DP
type: SiteQuality
SIO_000300: 1.289629e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.22e-1

FS
type: SiteQuality
SIO_000300: 3.119e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

VQSLOD
type: SiteQuality
SIO_000300: -3.306e0

QD
type: SiteQuality
SIO_000300: 3.289e1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

GenotypeQuality
all individuals: 149
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6386
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1529
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3186
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6626
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.979835500132661e-4
allele num: 7538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55108
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.97e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.84e-1

MQ
type: SiteQuality
SIO_000300: 5.871e1

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.98e0

DP
type: SiteQuality
SIO_000300: 1.261342e6

GenotypeQuality
all individuals: 17678
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3826
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2748
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5080
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 657
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6677
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13974
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.999440156756108e-5
allele num: 50014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.5e-2

DP
type: SiteQuality
SIO_000300: 1.241069e6

QD
type: SiteQuality
SIO_000300: 9.130000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.493e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.9e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.24e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 6602
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5224
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 124
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1348
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 410
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4050
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.278118609406953e-4
allele num: 7824
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.031120248317007e-5
allele num: 49614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5380
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.119e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.599e0

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

QD
type: SiteQuality
SIO_000300: 2.86e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-2

DP
type: SiteQuality
SIO_000300: 1.236438e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

GenotypeQuality
all individuals: 584
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2278
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6897
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3976
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5578
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1257
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4153
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5814
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4986
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.282271316414095e-5
allele num: 43816
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.758e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.33e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.67e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.217083e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

QD
type: SiteQuality
SIO_000300: 5.07e0

GenotypeQuality
all individuals: 200
bin: 5.75e1
variant carriers: 21

GenotypeQuality
all individuals: 108
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1711
bin: 3.25e1
variant carriers: 64

GenotypeQuality
all individuals: 1989
bin: 2.75e1
variant carriers: 67

GenotypeQuality
all individuals: 534
bin: 4.25e1
variant carriers: 36

GenotypeQuality
all individuals: 495
bin: 4.75e1
variant carriers: 33

GenotypeQuality
all individuals: 470
bin: 6.25e1
variant carriers: 10

GenotypeQuality
all individuals: 80
bin: 8.75e1
variant carriers: 8

GenotypeQuality
all individuals: 4612
bin: 1.25e1
variant carriers: 130

GenotypeQuality
all individuals: 1017
bin: 3.75e1
variant carriers: 51

GenotypeQuality
all individuals: 5100
bin: 1.75e1
variant carriers: 94

GenotypeQuality
all individuals: 119
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 104
bin: 8.25e1
variant carriers: 8

GenotypeQuality
all individuals: 1040
bin: 9.75e1
variant carriers: 24

South Asian
type: Population
allele count: 36
allele frequency: 1.750972762645914e-2
allele num: 2056
num of homozygotes: 0

East Asian
type: Population
allele count: 27
allele frequency: 1.934097421203438e-2
allele num: 1396
num of homozygotes: 0

Latino
type: Population
allele count: 65
allele frequency: 4.623044096728307e-2
allele num: 1406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 186
allele frequency: 1.19108606557377e-2
allele num: 15616
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 5.319148936170213e-3
allele num: 188
num of homozygotes: 0

African
type: Population
allele count: 23
allele frequency: 9.274193548387096e-3
allele num: 2480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 69
allele frequency: 5.416012558869702e-2
allele num: 1274
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.293e-1

DP
type: SiteQuality
SIO_000300: 1.191721e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.647e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.43e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e0

QD
type: SiteQuality
SIO_000300: 5.8e-1

FS
type: SiteQuality
SIO_000300: 1.2236e1

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1369
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1297
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50179
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1597
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3238
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.529999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.13e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

FS
type: SiteQuality
SIO_000300: 1.169e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 5.890871e6

VQSLOD
type: SiteQuality
SIO_000300: 2.0e-2

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3380
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50177
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.428e1

MQRankSum
type: SiteQuality
SIO_000300: -4.9e-2

FS
type: SiteQuality
SIO_000300: 1.347e0

VQSLOD
type: SiteQuality
SIO_000300: 5.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

DP
type: SiteQuality
SIO_000300: 5.891314e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.35e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1372
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3389
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923446816695518e-4
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 1.914e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.022e0

VQSLOD
type: SiteQuality
SIO_000300: 9.61e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

MQRankSum
type: SiteQuality
SIO_000300: 1.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e0

QD
type: SiteQuality
SIO_000300: 1.244e1

DP
type: SiteQuality
SIO_000300: 5.891166e6

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1595
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50177
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1371
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.69e0

FS
type: SiteQuality
SIO_000300: 4.61e-1

MQ
type: SiteQuality
SIO_000300: 5.992e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.48e-1

QD
type: SiteQuality
SIO_000300: 1.534e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.23e-1

DP
type: SiteQuality
SIO_000300: 5.891304e6

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3438
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50177
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1373
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.454828122300915e-4
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.816e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -9.091e-1

FS
type: SiteQuality
SIO_000300: 1.142e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.55e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e-1

DP
type: SiteQuality
SIO_000300: 5.891405e6

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1375
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1597
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50178
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.645e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.849e0

MQ
type: SiteQuality
SIO_000300: 5.993e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.582e0

FS
type: SiteQuality
SIO_000300: 4.961e0

MQRankSum
type: SiteQuality
SIO_000300: -7.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.69e0

VQSLOD
type: SiteQuality
SIO_000300: -9.94e-1

DP
type: SiteQuality
SIO_000300: 5.890886e6

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1600
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50181
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3484
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1379
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.49e1

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQ
type: SiteQuality
SIO_000300: 6.011e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.432e0

FS
type: SiteQuality
SIO_000300: 7.737e0

MQRankSum
type: SiteQuality
SIO_000300: -8.46e-1

DP
type: SiteQuality
SIO_000300: 5.891031e6

GenotypeQuality
all individuals: 3488
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1600
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.89121e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.731e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

MQ
type: SiteQuality
SIO_000300: 5.908e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 1.0679e1

MQRankSum
type: SiteQuality
SIO_000300: -1.835e0

VQSLOD
type: SiteQuality
SIO_000300: -2.786e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

QD
type: SiteQuality
SIO_000300: 1.041e1

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3504
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1604
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50181
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1296
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.155e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

DP
type: SiteQuality
SIO_000300: 5.891189e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.623e0

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1297
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3520
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50181
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.71e-1

DP
type: SiteQuality
SIO_000300: 5.891141e6

VQSLOD
type: SiteQuality
SIO_000300: -1.313e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

MQ
type: SiteQuality
SIO_000300: 5.754e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.720000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.71e-1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50181
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

MQRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

QD
type: SiteQuality
SIO_000300: 1.04e1

FS
type: SiteQuality
SIO_000300: 6.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

DP
type: SiteQuality
SIO_000300: 5.891248e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.645e0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1599
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3526
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50181
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.155e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 1.028e0

VQSLOD
type: SiteQuality
SIO_000300: 3.12e-1

DP
type: SiteQuality
SIO_000300: 5.891341e6

QD
type: SiteQuality
SIO_000300: 1.234e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1605
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3522
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 1.164e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 5.891325e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.23e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
SIO_000300: 1.666e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1610
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3516
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1300
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1377
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50183
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: 7.08e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

DP
type: SiteQuality
SIO_000300: 5.891282e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.97e-1

QD
type: SiteQuality
SIO_000300: 1.117e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.83e0

GenotypeQuality
all individuals: 703
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1609
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50183
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.990110878034162e-5
allele num: 66740
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.93e-1

DP
type: SiteQuality
SIO_000300: 5.891235e6

MQRankSum
type: SiteQuality
SIO_000300: -5.09e-1

QD
type: SiteQuality
SIO_000300: 1.242e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.111e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

FS
type: SiteQuality
SIO_000300: 5.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1297
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3502
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.951e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 5.600000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.044e1

DP
type: SiteQuality
SIO_000300: 5.890237e6

VQSLOD
type: SiteQuality
SIO_000300: 6.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.7e-2

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1373
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50182
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.076e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

VQSLOD
type: SiteQuality
SIO_000300: 4.8e-2

DP
type: SiteQuality
SIO_000300: 5.890256e6

FS
type: SiteQuality
SIO_000300: 7.507e0

QD
type: SiteQuality
SIO_000300: 1.183e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.494e0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50182
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3510
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996883241428914e-5
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.91e-1

DP
type: SiteQuality
SIO_000300: 5.890113e6

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.07e0

QD
type: SiteQuality
SIO_000300: 1.145e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e0

FS
type: SiteQuality
SIO_000300: 1.214e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.088e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3504
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1372
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1190
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50192
bin: 9.75e1
variant carriers: 103

GenotypeQuality
all individuals: 1597
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 100
allele frequency: 9.609840476648087e-3
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.36e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-1

QD
type: SiteQuality
SIO_000300: 1.394e1

MQRankSum
type: SiteQuality
SIO_000300: 3.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.348e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-1

FS
type: SiteQuality
SIO_000300: 5.37e-1

DP
type: SiteQuality
SIO_000300: 5.89157e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50155
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1297
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3503
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.876026e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

QD
type: SiteQuality
SIO_000300: 1.494e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.821e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: 2.31e0

FS
type: SiteQuality
SIO_000300: 2.271e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: -7.755e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50156
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1370
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.875673e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

FS
type: SiteQuality
SIO_000300: 3.647e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.57e-1

QD
type: SiteQuality
SIO_000300: 1.167e1

GenotypeQuality
all individuals: 50157
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1367
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1572
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3446
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1293
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.79e-1

DP
type: SiteQuality
SIO_000300: 5.875361e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.74e0

MQRankSum
type: SiteQuality
SIO_000300: 2.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.175e0

QD
type: SiteQuality
SIO_000300: 1.201e1

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 1195
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1574
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50157
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 756
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.679999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.875233e6

VQSLOD
type: SiteQuality
SIO_000300: -2.366e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 8.33e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1574
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3445
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.04e-1

DP
type: SiteQuality
SIO_000300: 5.875111e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 2.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.464e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.18e0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1291
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3431
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1569
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50157
bin: 9.75e1
variant carriers: 28

South Asian
type: Population
allele count: 23
allele frequency: 1.393095093882496e-3
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.49243264303054e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.358e1

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-1

DP
type: SiteQuality
SIO_000300: 5.876173e6

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.985e0

FS
type: SiteQuality
SIO_000300: 1.165e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.13e0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3426
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50159
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-1

QD
type: SiteQuality
SIO_000300: 1.162e1

MQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.865e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.905e0

DP
type: SiteQuality
SIO_000300: 5.875783e6

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50159
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 749
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.066e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

FS
type: SiteQuality
SIO_000300: 1.214e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.65e-1

QD
type: SiteQuality
SIO_000300: 1.397e1

DP
type: SiteQuality
SIO_000300: 5.875619e6

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1566
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50159
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1291
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.397e1

FS
type: SiteQuality
SIO_000300: 1.214e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.066e0

DP
type: SiteQuality
SIO_000300: 5.875619e6

GenotypeQuality
all individuals: 751
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1557
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3415
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50161
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1290
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.875675e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQ
type: SiteQuality
SIO_000300: 5.643e1

MQRankSum
type: SiteQuality
SIO_000300: -1.669e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

FS
type: SiteQuality
SIO_000300: 1.757e0

QD
type: SiteQuality
SIO_000300: 1.89e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 6

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 9

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 10

GenotypeQuality
all individuals: 633
bin: 7.25e1
variant carriers: 15

GenotypeQuality
all individuals: 1172
bin: 7.75e1
variant carriers: 22

GenotypeQuality
all individuals: 617
bin: 8.75e1
variant carriers: 18

GenotypeQuality
all individuals: 1316
bin: 6.75e1
variant carriers: 22

East Asian
type: Population
allele count: 3610
allele frequency: 4.183082271147161e-1
allele num: 8630
num of homozygotes: 753

Other
type: Population
allele count: 432
allele frequency: 4.757709251101321e-1
allele num: 908
num of homozygotes: 111

European (Finnish)
type: Population
allele count: 2226
allele frequency: 3.365588146356214e-1
allele num: 6614
num of homozygotes: 354

European (Non-Finnish)
type: Population
allele count: 32216
allele frequency: 4.829405768423577e-1
allele num: 66708
num of homozygotes: 7880

African
type: Population
allele count: 5110
allele frequency: 4.918190567853705e-1
allele num: 10390
num of homozygotes: 1268

Latino
type: Population
allele count: 6228
allele frequency: 5.38195644659523e-1
allele num: 11572
num of homozygotes: 1661

South Asian
type: Population
allele count: 6995
allele frequency: 4.237852901975039e-1
allele num: 16506
num of homozygotes: 1503

QD
type: SiteQuality
SIO_000300: 2.197e1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

DP
type: SiteQuality
SIO_000300: 6.240552e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.81e-1

FS
type: SiteQuality
SIO_000300: 5.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.87e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.41e0

GenotypeQuality
all individuals: 2054
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5205
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11446
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3558
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2293
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.45e-1

DP
type: SiteQuality
SIO_000300: 2.778582e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-1

FS
type: SiteQuality
SIO_000300: 6.84e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 1.546e1

GenotypeQuality
all individuals: 46
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2052
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4187
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27482
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 2284
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.350783454403554e-4
allele num: 66628
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.61e-1

QD
type: SiteQuality
SIO_000300: 1.257e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.46e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.63e0

DP
type: SiteQuality
SIO_000300: 2.77762e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.239e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.64e-1

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11434
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3558
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27477
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2051
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501366243281386e-5
allele num: 66606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

MQ
type: SiteQuality
SIO_000300: 5.946e1

DP
type: SiteQuality
SIO_000300: 2.775618e6

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.72e-1

FS
type: SiteQuality
SIO_000300: 1.217e0

VQSLOD
type: SiteQuality
SIO_000300: 2.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.502e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.23e0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11245
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27468
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5116
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4171
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502990951994469e-5
allele num: 66534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.883e0

DP
type: SiteQuality
SIO_000300: 2.770985e6

MQRankSum
type: SiteQuality
SIO_000300: -1.661e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e0

VQSLOD
type: SiteQuality
SIO_000300: -3.646e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

QD
type: SiteQuality
SIO_000300: 1.473e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.34e0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5098
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4170
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2050
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27465
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66514
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.436e1

MQRankSum
type: SiteQuality
SIO_000300: -7.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.62e-1

MQ
type: SiteQuality
SIO_000300: 5.905e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.953e0

VQSLOD
type: SiteQuality
SIO_000300: -2.557e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.325e0

FS
type: SiteQuality
SIO_000300: 1.2695e1

DP
type: SiteQuality
SIO_000300: 2.769136e6

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2265
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4167
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2049
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27463
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5093
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4100
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.798157946306095e-5
allele num: 10206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 2.721e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

QD
type: SiteQuality
SIO_000300: 1.563e1

DP
type: SiteQuality
SIO_000300: 2.767423e6

VQSLOD
type: SiteQuality
SIO_000300: 4.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.689e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
all individuals: 5071
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4101
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11010
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3553
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4162
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504573904670197e-5
allele num: 66464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 2.764957e6

MQRankSum
type: SiteQuality
SIO_000300: 5.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

FS
type: SiteQuality
SIO_000300: 8.068e0

MQ
type: SiteQuality
SIO_000300: 6.049e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.738e0

QD
type: SiteQuality
SIO_000300: 1.519e1

GenotypeQuality
all individuals: 4162
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27457
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5060
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4100
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2049
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.45e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.763353e6

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

MQ
type: SiteQuality
SIO_000300: 5.99e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.423e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.811e1

GenotypeQuality
all individuals: 27453
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 4150
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4089
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10778
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3551
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66382
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.801664355062413e-4
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.28e-1

FS
type: SiteQuality
SIO_000300: 4.677e0

VQSLOD
type: SiteQuality
SIO_000300: 8.2e-1

DP
type: SiteQuality
SIO_000300: 2.760009e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.979e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-2

QD
type: SiteQuality
SIO_000300: 1.275e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10710
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2242
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27445
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3550
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.136e1

MQ
type: SiteQuality
SIO_000300: 5.996e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.757808e6

MQRankSum
type: SiteQuality
SIO_000300: -3.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.91e-1

FS
type: SiteQuality
SIO_000300: 7.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.41e0

VQSLOD
type: SiteQuality
SIO_000300: 5.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.45e-1

GenotypeQuality
all individuals: 184
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27446
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4085
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5005
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2237
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3549
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10076
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.014408874419726e-5
allele num: 66348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.13e-1

DP
type: SiteQuality
SIO_000300: 2.75538e6

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 6.057e1

QD
type: SiteQuality
SIO_000300: 1.806e1

VQSLOD
type: SiteQuality
SIO_000300: 2.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 9.55e-1

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4080
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27444
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4139
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3549
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4993
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2233
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507749834147518e-5
allele num: 66324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.32e0

MQRankSum
type: SiteQuality
SIO_000300: -4.2e-1

DP
type: SiteQuality
SIO_000300: 2.753724e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 1.44e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 5.826e0

VQSLOD
type: SiteQuality
SIO_000300: 7.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-1

GenotypeQuality
all individuals: 71
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10370
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2043
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27442
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3550
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4983
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.99203187250996e-4
allele num: 10040
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.752145e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.259e0

MQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 1.253e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.06e0

GenotypeQuality
all individuals: 4064
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27434
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2214
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4113
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2040
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1223
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9954
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510026576467746e-5
allele num: 66224
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.76e0

DP
type: SiteQuality
SIO_000300: 2.74519e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.91e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.1e-2

QD
type: SiteQuality
SIO_000300: 1.689e1

FS
type: SiteQuality
SIO_000300: 3.506e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 372
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4818
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4053
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4086
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2191
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9508
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3535
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.024071610015725e-5
allele num: 66136
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169590643274854e-4
allele num: 8550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.249e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.489e0

MQRankSum
type: SiteQuality
SIO_000300: 8.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.399999999999999e-1

FS
type: SiteQuality
SIO_000300: 9.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 2.735722e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.49e-1

GenotypeQuality
all individuals: 2033
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9031
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1239
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4046
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27419
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66058
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 2.573e0

QD
type: SiteQuality
SIO_000300: 1.331e1

MQ
type: SiteQuality
SIO_000300: 5.869e1

MQRankSum
type: SiteQuality
SIO_000300: 4.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.74e0

DP
type: SiteQuality
SIO_000300: 2.727387e6

GenotypeQuality
all individuals: 716
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 3909
bin: 7.75e1
variant carriers: 6

GenotypeQuality
all individuals: 700
bin: 4.75e1
variant carriers: 10

GenotypeQuality
all individuals: 26837
bin: 9.75e1
variant carriers: 46

GenotypeQuality
all individuals: 333
bin: 5.25e1
variant carriers: 9

GenotypeQuality
all individuals: 1980
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1028
bin: 2.25e1
variant carriers: 7

GenotypeQuality
all individuals: 2063
bin: 7.25e1
variant carriers: 9

GenotypeQuality
all individuals: 533
bin: 2.75e1
variant carriers: 7

GenotypeQuality
all individuals: 4251
bin: 6.75e1
variant carriers: 9

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 103
allele frequency: 1.589751504861861e-3
allele num: 64790
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.288329519450801e-3
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 16
allele frequency: 2.543720190779014e-3
allele num: 6290
num of homozygotes: 0

African
type: Population
allele count: 19
allele frequency: 2.050949913644214e-3
allele num: 9264
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.716875871687587e-5
allele num: 11472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

DP
type: SiteQuality
SIO_000300: 2.707404e6

VQSLOD
type: SiteQuality
SIO_000300: -3.612e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.197e0

FS
type: SiteQuality
SIO_000300: 2.0222e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.7e-1

MQ
type: SiteQuality
SIO_000300: 5.855e1

GenotypeQuality
all individuals: 482
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3979
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2056
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2005
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4190
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.080505898090721e-5
allele num: 16446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.057e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: -1.085e0

QD
type: SiteQuality
SIO_000300: 1.127e1

DP
type: SiteQuality
SIO_000300: 2.696197e6

GenotypeQuality
all individuals: 69
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3494
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27688
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 3969
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2028
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3903
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9508
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.968641114982578e-4
allele num: 11480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.421e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.56e-1

DP
type: SiteQuality
SIO_000300: 2.680834e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: -5.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

GenotypeQuality
all individuals: 1257
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3494
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3888
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3950
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.055966209081309e-4
allele num: 9470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.82e-1

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

FS
type: SiteQuality
SIO_000300: 4.218e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.06e-1

DP
type: SiteQuality
SIO_000300: 2.674206e6

GenotypeQuality
all individuals: 1495
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6551
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8146
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2435
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503081316699233e-5
allele num: 66530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.970873e6

QD
type: SiteQuality
SIO_000300: 1.134e1

FS
type: SiteQuality
SIO_000300: 2.465e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.302e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.145e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2036
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2420
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1488
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.546e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.972306e6

MQRankSum
type: SiteQuality
SIO_000300: -2.472e0

VQSLOD
type: SiteQuality
SIO_000300: -2.93e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.528e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

GenotypeQuality
all individuals: 606
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6549
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 160
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2039
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502945773716484e-5
allele num: 66536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.525e0

DP
type: SiteQuality
SIO_000300: 1.972341e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

QD
type: SiteQuality
SIO_000300: 1.726e1

MQRankSum
type: SiteQuality
SIO_000300: -1.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.51e0

VQSLOD
type: SiteQuality
SIO_000300: -9.675e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.411e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6548
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 932
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2415
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8168
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1485
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e-1

DP
type: SiteQuality
SIO_000300: 1.975939e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.216e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.6e-2

FS
type: SiteQuality
SIO_000300: 1.343e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

GenotypeQuality
all individuals: 6548
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37937
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1485
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8168
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.975939e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.216e1

MQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

FS
type: SiteQuality
SIO_000300: 1.343e0

VQSLOD
type: SiteQuality
SIO_000300: 2.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.6e-2

GenotypeQuality
all individuals: 2038
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2417
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6544
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.969708968521085e-4
allele num: 10102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66572
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.352e1

DP
type: SiteQuality
SIO_000300: 1.976772e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.978e1

MQRankSum
type: SiteQuality
SIO_000300: -7.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.21e0

VQSLOD
type: SiteQuality
SIO_000300: 3.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.75e-1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6541
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8177
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38129
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1486
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2039
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQ
type: SiteQuality
SIO_000300: 5.919e1

FS
type: SiteQuality
SIO_000300: 8.35e-1

QD
type: SiteQuality
SIO_000300: 1.346e1

DP
type: SiteQuality
SIO_000300: 1.978038e6

VQSLOD
type: SiteQuality
SIO_000300: -1.478e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: 1.44e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.703e0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6542
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 606
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2420
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.842619745845552e-4
allele num: 10230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.073e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e-1

DP
type: SiteQuality
SIO_000300: 1.979883e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 1.197e0

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

GenotypeQuality
all individuals: 2047
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1492
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2422
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8193
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999670036296008e-5
allele num: 66674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.6e-1

DP
type: SiteQuality
SIO_000300: 1.980457e6

FS
type: SiteQuality
SIO_000300: 8.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

QD
type: SiteQuality
SIO_000300: 1.234e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.229e0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2048
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8196
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1493
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2424
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999220202747286e-5
allele num: 66684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.84e-1

FS
type: SiteQuality
SIO_000300: 7.1e0

VQSLOD
type: SiteQuality
SIO_000300: -1.226e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.83e0

MQRankSum
type: SiteQuality
SIO_000300: -5.828e0

QD
type: SiteQuality
SIO_000300: 3.95e0

DP
type: SiteQuality
SIO_000300: 1.980765e6

MQ
type: SiteQuality
SIO_000300: 5.379e1