3-93715514-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93715514
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93715514
    reference: chr 3
allele count: 3
allele frequency: 3.689129365469749e-4
allele num: 8132
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-6989G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+726G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-6989G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+726G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417702
  ensembl transcript: ENST00000478400
  gene symbol: ARL13B
  hgvsc: ENST00000478400.1:c.163G>A
  hgvsp: ENSP00000417702.1:p.Ala55Thr
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.130+726G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.130+726G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+726G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.253G>A
  hgvsp: ENSP00000418128.1:p.Ala85Thr
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.238G>A
  hgvsp: ENSP00000335400.3:p.Ala80Thr
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+16188G>A
  variant of: http://identifiers.org/hgnc/25419
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala55Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

3-93715522-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93715522
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93715522
    reference: chr 3
allele count: 3
allele frequency: 4.201680672268908e-4
allele num: 7140
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+734C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417702
  ensembl transcript: ENST00000478400
  gene symbol: ARL13B
  hgvsc: ENST00000478400.1:c.171C>T
  hgvsp: ENST00000478400.1:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.261C>T
  hgvsp: ENST00000475206.1:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.246C>T
  hgvsp: ENST00000335438.3:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.130+734C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-6981C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.130+734C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-6981C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+734C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+16196C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+734C>T
  variant of: http://identifiers.org/hgnc/25419
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro57Pro
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/3-93715553-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93715553
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93715553
    reference: chr 3
allele count: 1
allele frequency: 2.200704225352113e-4
allele num: 4544
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.130+765C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-6950C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-6950C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.252+25C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+765C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.130+765C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+765C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+16227C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.267+25C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+765C>A
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2928
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

3-93715572-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93715572
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93715572
    reference: chr 3
allele count: 1
allele frequency: 3.134796238244514e-4
allele num: 3190
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.267+44A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+16246A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.130+784A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+784A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+784A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-6931A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.252+44A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-6931A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+784A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.130+784A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3524
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

3-93715575-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93715575
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93715575
    reference: chr 3
allele count: 1
allele frequency: 3.289473684210526e-4
allele num: 3040
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-6928C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.252+47C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+787C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-6928C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+16249C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+787C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.130+787C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.130+787C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.267+47C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+787C>T
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD

3-93722455-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722455
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722455
    reference: chr 3
allele count: 1
allele frequency: 8.460523198754612e-6
allele num: 118196
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23129T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.253-48T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.268-48T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-48T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7667T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7667T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7667T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.131-48T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.131-48T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-48T>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11334
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20424
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

3-93722457-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722457
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722457
    reference: chr 3
allele count: 1
allele frequency: 8.456802652053312e-6
allele num: 118248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.131-46A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7669A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7669A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-46A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-46A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23131A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.131-46A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.253-46A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7669A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.268-46A>T
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8367
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

3-93722458-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722458
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722458
    reference: chr 3
allele count: 1
allele frequency: 8.456087537418188e-6
allele num: 118258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7670A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23132A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.131-45A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.131-45A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-45A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7670A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-45A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7670A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.268-45A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.253-45A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11140
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2597
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

3-93722464-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722464
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722464
    reference: chr 3
allele count: 20
allele frequency: 1.689588754097253e-4
allele num: 118372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7676G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.253-39G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-39G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7676G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.268-39G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23138G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7676G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.131-39G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.131-39G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-39G>A
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11720
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5784
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8395
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11340
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2636
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum

3-93722477-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722477
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722476
    reference: chr 3
allele count: 3
allele frequency: 2.525167502777684e-5
allele num: 118804
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.268-19delT
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7696delT
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23158delT
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-19delT
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7696delT
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.131-19delT
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.253-19delT
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7696delT
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.131-19delT
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-19delT
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11995
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8467
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: CT
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum

3-93722478-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722478
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722478
    reference: chr 3
allele count: 1
allele frequency: 8.412976174451474e-6
allele num: 118864
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-25T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.268-25T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-25T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7690T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23152T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.253-25T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7690T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7690T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.131-25T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.131-25T>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5811
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-93722479-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722479
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722479
    reference: chr 3
allele count: 1
allele frequency: 8.410004541402452e-6
allele num: 118906
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7691T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7691T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-24T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23153T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.131-24T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.253-24T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.268-24T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.131-24T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-24T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7691T>C
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12491
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

3-93722483-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722483
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722483
    reference: chr 3
allele count: 2
allele frequency: 1.67897918065816e-5
allele num: 119120
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.268-20T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23157T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7695T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-20T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.131-20T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7695T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-20T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.253-20T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7695T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.131-20T>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11604
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2696
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

3-93722485-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722485
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722485
    reference: chr 3
allele count: 1
allele frequency: 8.384619254439656e-6
allele num: 119266
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.131-18G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7697G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-18G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.131-18G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.253-18G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23159G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-18G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7697G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7697G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.268-18G>A
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

3-93722502-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722502
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722502
    reference: chr 3
allele count: 1
allele frequency: 8.314348903337379e-6
allele num: 120274
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.268-1G>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-179-1G>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7714G>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23176G>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.196-1G>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.131-1G>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7714G>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.131-1G>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.253-1G>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7714G>C
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2707
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
hgvs: c.131-1G>C
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

3-93722504-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722504
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722504
    reference: chr 3
allele count: 1
allele frequency: 8.308822307526131e-6
allele num: 120354
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-178A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23178A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.197A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.132A>G
  hgvsp: ENST00000394222.3:c.132A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.269A>G
  hgvsp: ENSP00000418128.1:p.Asn90Ser
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7716A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.254A>G
  hgvsp: ENSP00000335400.3:p.Asn85Ser
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7716A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.132A>G
  hgvsp: ENST00000471138.1:c.132A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7716A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn90Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

3-93722506-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722506
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722506
    reference: chr 3
allele count: 6
allele frequency: 4.982974835977079e-5
allele num: 120410
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.134A>G
  hgvsp: ENSP00000377769.3:p.Tyr45Cys
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.271A>G
  hgvsp: ENSP00000418128.1:p.Thr91Ala
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7718A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.256A>G
  hgvsp: ENSP00000335400.3:p.Thr86Ala
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.199A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7718A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7718A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.134A>G
  hgvsp: ENSP00000420780.1:p.Tyr45Cys
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23180A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-176A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr45Cys
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

3-93722510-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722510
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722510
    reference: chr 3
allele count: 2
allele frequency: 1.658512314453935e-5
allele num: 120590
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.260T>G
  hgvsp: ENSP00000335400.3:p.Leu87Arg
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7722T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-172T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7722T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.203T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.138T>G
  hgvsp: ENST00000471138.1:c.138T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7722T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.275T>G
  hgvsp: ENSP00000418128.1:p.Leu92Arg
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23184T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.138T>G
  hgvsp: ENST00000394222.3:c.138T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11673
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu92Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

3-93722517-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722517
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722517
    reference: chr 3
allele count: 1
allele frequency: 8.281573498964803e-6
allele num: 120750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.210G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.282G>A
  hgvsp: ENSP00000418128.1:p.Met94Ile
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23191G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-165G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7729G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.145G>A
  hgvsp: ENSP00000420780.1:p.Val49Ile
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.267G>A
  hgvsp: ENSP00000335400.3:p.Met89Ile
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.145G>A
  hgvsp: ENSP00000377769.3:p.Val49Ile
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7729G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7729G>A
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4266
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3112
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val49Ile
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

3-93722529-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722529
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722529
    reference: chr 3
allele count: 1
allele frequency: 8.268289456277286e-6
allele num: 120944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7741G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*9G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*9G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.222G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.157G>T
  hgvsp: ENSP00000420780.1:p.Val53Phe
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.157G>T
  hgvsp: ENSP00000377769.3:p.Val53Phe
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-153G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7741G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7741G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23203G>T
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13749
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val53Phe
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

3-93722534-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722534
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722534
    reference: chr 3
allele count: 2
allele frequency: 1.652865241896828e-5
allele num: 121002
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.162A>G
  hgvsp: ENST00000471138.1:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-148A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.162A>G
  hgvsp: ENST00000394222.3:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7746A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7746A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*14A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7746A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*14A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23208A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.227A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12360
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2711
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly54Gly
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD

3-93722541-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722541
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722541
    reference: chr 3
allele count: 1
allele frequency: 8.260912665631299e-6
allele num: 121052
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-141A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*21A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*21A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.169A>G
  hgvsp: ENSP00000420780.1:p.Lys57Glu
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7753A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.169A>G
  hgvsp: ENSP00000377769.3:p.Lys57Glu
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7753A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.234A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23215A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7753A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13831
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys57Glu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

3-93722557-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722557
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722557
    reference: chr 3
allele count: 1
allele frequency: 8.251097395953662e-6
allele num: 121196
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.185A>T
  hgvsp: ENSP00000377769.3:p.Gln62Leu
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7769A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23231A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-125A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7769A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.185A>T
  hgvsp: ENSP00000420780.1:p.Gln62Leu
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*37A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.250A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*37A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7769A>T
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5819
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4268
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gln62Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/3-93722561-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722561
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722561
    reference: chr 3
allele count: 3
allele frequency: 2.475002475002475e-5
allele num: 121212
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7773A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23235A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-121A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7773A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.254A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*41A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.189A>C
  hgvsp: ENST00000471138.1:c.189A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.189A>C
  hgvsp: ENST00000394222.3:c.189A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7773A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*41A>C
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8499
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly63Gly
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

3-93722567-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722567
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722567
    reference: chr 3
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-115T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7779T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.260T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23241T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*47T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.195T>G
  hgvsp: ENSP00000420780.1:p.Phe65Leu
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.195T>G
  hgvsp: ENSP00000377769.3:p.Phe65Leu
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*47T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7779T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7779T>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8499
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13916
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Phe65Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/3-93722574-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722574
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722574
    reference: chr 3
allele count: 2
allele frequency: 1.649430121892886e-5
allele num: 121254
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-108A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*54A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.267A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7786A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7786A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.202A>C
  hgvsp: ENSP00000420780.1:p.Thr68Pro
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23248A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7786A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*54A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.202A>C
  hgvsp: ENSP00000377769.3:p.Thr68Pro
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11715
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13900
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr68Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/3-93722576-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722576
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722576
    reference: chr 3
allele count: 1
allele frequency: 8.246470510621453e-6
allele num: 121264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.204C>A
  hgvsp: ENST00000471138.1:c.204C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*56C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*56C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7788C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.269C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-106C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7788C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.204C>A
  hgvsp: ENST00000394222.3:c.204C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23250C>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7788C>A
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12435
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11714
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr68Thr
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

3-93722577-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722577
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722577
    reference: chr 3
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-105A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*57A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7789A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.205A>G
  hgvsp: ENSP00000377769.3:p.Ile69Val
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.270A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*57A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.205A>G
  hgvsp: ENSP00000420780.1:p.Ile69Val
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7789A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7789A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23251A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5823
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4268
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3123
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile69Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

3-93722579-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722579
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722579
    reference: chr 3
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.272C>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.207C>G
  hgvsp: ENSP00000420780.1:p.Ile69Met
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.207C>G
  hgvsp: ENSP00000377769.3:p.Ile69Met
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*59C>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7791C>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7791C>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*59C>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-103C>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7791C>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23253C>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11715
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20527
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile69Met
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum

3-93722607-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722607
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722607
    reference: chr 3
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.235C>T
  hgvsp: ENSP00000420780.1:p.Arg79Trp
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*87C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-75C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.300C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.235C>T
  hgvsp: ENSP00000377769.3:p.Arg79Trp
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23281C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7819C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7819C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7819C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*87C>T
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12471
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11724
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg79Trp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

3-93722626-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722626
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722626
    reference: chr 3
allele count: 1
allele frequency: 8.240490473993011e-6
allele num: 121352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*106A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.254A>T
  hgvsp: ENSP00000420780.1:p.Tyr85Phe
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23300A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.319A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7838A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-56A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7838A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*106A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.254A>T
  hgvsp: ENSP00000377769.3:p.Tyr85Phe
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7838A>T
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5823
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5259
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Tyr85Phe
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

3-93722640-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722640
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722640
    reference: chr 3
allele count: 3
allele frequency: 2.471902705909495e-5
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7852T>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23314T>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*120T>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7852T>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-42T>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7852T>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*120T>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.333T>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.268T>A
  hgvsp: ENSP00000420780.1:p.Tyr90Asn
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.268T>A
  hgvsp: ENSP00000377769.3:p.Tyr90Asn
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr90Asn
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

3-93722641-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722641
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722641
    reference: chr 3
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.334A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*121A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.269A>G
  hgvsp: ENSP00000377769.3:p.Tyr90Cys
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-41A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7853A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23315A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.269A>G
  hgvsp: ENSP00000420780.1:p.Tyr90Cys
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*121A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7853A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7853A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12482
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14005
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Tyr90Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

3-93722642-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722642
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722642
    reference: chr 3
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.270T>C
  hgvsp: ENST00000394222.3:c.270T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*122T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7854T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.335T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7854T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-40T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23316T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7854T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.270T>C
  hgvsp: ENST00000471138.1:c.270T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*122T>C
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12862
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5824
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5260
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Tyr90Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

3-93722655-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722655
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722655
    reference: chr 3
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.283G>T
  hgvsp: ENSP00000420780.1:p.Val95Phe
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-27G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.348G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7867G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.283G>T
  hgvsp: ENSP00000377769.3:p.Val95Phe
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23329G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7867G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*135G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*135G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7867G>T
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val95Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

3-93722658-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722658
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722658
    reference: chr 3
allele count: 2
allele frequency: 1.647907980818351e-5
allele num: 121366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-24G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*138G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*138G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.351G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7870G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23332G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.286G>T
  hgvsp: ENSP00000420780.1:p.Val96Leu
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.286G>T
  hgvsp: ENSP00000377769.3:p.Val96Leu
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7870G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7870G>T
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8502
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2713
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val96Leu
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

3-93722671-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722671
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722671
    reference: chr 3
allele count: 2
allele frequency: 1.647717910693689e-5
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-11A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23345A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.299A>G
  hgvsp: ENSP00000420780.1:p.Asp100Gly
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7883A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*151A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.299A>G
  hgvsp: ENSP00000377769.3:p.Asp100Gly
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7883A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7883A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.364A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*151A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8498
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp100Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ

3-93722673-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722673
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722673
    reference: chr 3
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.301G>A
  hgvsp: ENSP00000377769.3:p.Glu101Lys
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23347G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.301G>A
  hgvsp: ENSP00000420780.1:p.Glu101Lys
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*153G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7885G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.366G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*153G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7885G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7885G>A
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20532
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14010
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu101Lys
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

3-93722676-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722676
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722676
    reference: chr 3
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.-6G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*156G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.369G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.304G>A
  hgvsp: ENSP00000377769.3:p.Glu102Lys
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.304G>A
  hgvsp: ENSP00000420780.1:p.Glu102Lys
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7888G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7888G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*156G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7888G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23350G>A
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4267
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu102Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

3-93722685-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722685
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722685
    reference: chr 3
allele count: 3
allele frequency: 2.471739775236463e-5
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.4G>T
  hgvsp: ENSP00000445145.1:p.Glu2Ter
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23359G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7897G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*165G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.313G>T
  hgvsp: ENSP00000377769.3:p.Glu105Ter
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.313G>T
  hgvsp: ENSP00000420780.1:p.Glu105Ter
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*165G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7897G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7897G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.378G>T
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4268
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu105Ter
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD

3-93722691-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722691
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722691
    reference: chr 3
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.319A>G
  hgvsp: ENSP00000420780.1:p.Thr107Ala
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7903A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.10A>G
  hgvsp: ENSP00000445145.1:p.Thr4Ala
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*171A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.384A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.319A>G
  hgvsp: ENSP00000377769.3:p.Thr107Ala
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*171A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23365A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7903A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7903A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8502
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4792
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr107Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: A
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

3-93722698-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722698
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722698
    reference: chr 3
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7910A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7910A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.17A>G
  hgvsp: ENSP00000445145.1:p.Glu6Gly
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*178A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7910A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.326A>G
  hgvsp: ENSP00000377769.3:p.Glu109Gly
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23372A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.326A>G
  hgvsp: ENSP00000420780.1:p.Glu109Gly
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.391A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*178A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu109Gly
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS

3-93722706-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722706
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722706
    reference: chr 3
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*186T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.334T>G
  hgvsp: ENSP00000377769.3:p.Ser112Ala
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.25T>G
  hgvsp: ENSP00000445145.1:p.Ser9Ala
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*186T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.399T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7918T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.334T>G
  hgvsp: ENSP00000420780.1:p.Ser112Ala
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7918T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23380T>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7918T>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5929
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser112Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-93722712-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722712
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722712
    reference: chr 3
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*192A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7924A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7924A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.340A>C
  hgvsp: ENSP00000420780.1:p.Met114Leu
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.405A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.31A>C
  hgvsp: ENSP00000445145.1:p.Met11Leu
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*192A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7924A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23386A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.340A>C
  hgvsp: ENSP00000377769.3:p.Met114Leu
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Met114Leu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ

3-93722717-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722717
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722717
    reference: chr 3
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.36A>G
  hgvsp: ENST00000535334.1:c.36A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7929A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*197A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.345A>G
  hgvsp: ENST00000471138.1:c.345A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*197A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7929A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.345A>G
  hgvsp: ENST00000394222.3:c.345A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.410A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7929A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23391A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8499
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5823
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5248
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu115Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

3-93722733-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722733
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722733
    reference: chr 3
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.426T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7945T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.52T>C
  hgvsp: ENSP00000445145.1:p.Ser18Pro
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*213T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23407T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.361T>C
  hgvsp: ENSP00000377769.3:p.Ser121Pro
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000418128
  ensembl transcript: ENST00000475206
  gene symbol: ARL13B
  hgvsc: ENST00000475206.1:c.*213T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.361T>C
  hgvsp: ENSP00000420780.1:p.Ser121Pro
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7945T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7945T>C
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4265
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser121Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS

3-93722751-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722751
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722751
    reference: chr 3
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.70G>T
  hgvsp: ENSP00000445145.1:p.Val24Leu
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.379G>T
  hgvsp: ENSP00000377769.3:p.Val127Leu
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*231G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23425G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.379G>T
  hgvsp: ENSP00000420780.1:p.Val127Leu
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7963G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000492165
  gene symbol: ARL13B
  hgvsc: ENST00000492165.1:n.444G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7963G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7963G>T
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5916
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val127Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

3-93722762-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722762
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722762
    reference: chr 3
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7974G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7974G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23436G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7974G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10G>A
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11716
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20520
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13832
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3104
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

3-93722766-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722766
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722766
    reference: chr 3
allele count: 4
allele frequency: 3.297500494625074e-5
allele num: 121304
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+14G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7978G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+14G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7978G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7978G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+14G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+14G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23440G>A
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5816
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4794
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5900
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

3-93722774-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722774
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722774
    reference: chr 3
allele count: 9
allele frequency: 7.421578652241316e-5
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+7986G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+7986G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+22G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+7986G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23448G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+22G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+22G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+22G>A
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11701
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13635
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4789
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

3-93722788-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722788
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722788
    reference: chr 3
allele count: 45
allele frequency: 3.712871287128713e-4
allele num: 121200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+36G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+8000G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+36G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23462G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+8000G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+8000G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+36G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+36G>A
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11648
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12274
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12005
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8481
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2706
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4776
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

3-93722788-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722788
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722788
    reference: chr 3
allele count: 53
allele frequency: 4.372937293729373e-4
allele num: 121200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+8000G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+8000G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+36G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+36G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+36G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23462G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+8000G>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+36G>T
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12274
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 8481
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11648
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12005
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3095
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20569
  bin: 9.75e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12868
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/3-93722789-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722789
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722789
    reference: chr 3
allele count: 1
allele frequency: 8.249599894405122e-6
allele num: 121218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+37A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+37A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+37A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+8001A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+8001A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23463A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+8001A>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+37A>C
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12950
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5216
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20527
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5790
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-93722798-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722798
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722798
    reference: chr 3
allele count: 54
allele frequency: 4.460155940266949e-4
allele num: 121072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+46G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+46G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+46G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+8010G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+46G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23472G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+8010G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+8010G>A
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5820
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11997
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11562
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8500
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 11980
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2708
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3080
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

3-93722804-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93722804
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93722804
    reference: chr 3
allele count: 1
allele frequency: 8.260639703938672e-6
allele num: 121056
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+52A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+52A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+8016A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+8016A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+8016A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+52A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.59+23478A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+52A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12089
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3076
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

3-93733180-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93733180
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93733180
    reference: chr 3
allele count: 6
allele frequency: 6.260042150950483e-5
allele num: 95846
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10428A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+18392A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+18392A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+18392A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10428A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10428A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10428A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.60-20995A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13808
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9262
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15317
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4702
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6685
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7403
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3741
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-93733182-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93733182
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93733182
    reference: chr 3
allele count: 1
allele frequency: 1.04305740987984e-5
allele num: 95872
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+18394A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10430A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.60-20993A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+18394A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10430A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10430A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+18394A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10430A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4686
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12836
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3319
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6208
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2944
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6550
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP

3-93733186-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93733186
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93733186
    reference: chr 3
allele count: 29
allele frequency: 3.016120644825793e-4
allele num: 96150
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10434T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+18398T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+18398T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10434T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10434T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+18398T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10434T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.60-20989T>C
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15125
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4657
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12497
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6770
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10525
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3526
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2872
  bin: 9.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3416
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum

3-93733187-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93733187
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93733187
    reference: chr 3
allele count: 2
allele frequency: 2.079823630956095e-5
allele num: 96162
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+18399A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10435A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10435A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10435A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10435A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+18399A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+18399A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.60-20988A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15023
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4656
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9846
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3391
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2651
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3574
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4054
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2845
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2963
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

3-93733196-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93733196
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93733196
    reference: chr 3
allele count: 9
allele frequency: 9.322946879920444e-5
allele num: 96536
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10444C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+18408C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+18408C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10444C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+18408C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.60-20979C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10444C>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10444C>T
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12227
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4539
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5551
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20442
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6704
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5534
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3901
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19796
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2987
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

3-93733197-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93733197
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93733197
    reference: chr 3
allele count: 21
allele frequency: 2.176165803108808e-4
allele num: 96500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+18409G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+18409G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10445G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10445G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+18409G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10445G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.60-20978G>A
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10445G>A
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4521
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4295
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6621
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5897
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11436
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21285
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3069
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2870
  bin: 9.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6929
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20723
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

3-93733199-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93733199
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93733199
    reference: chr 3
allele count: 2
allele frequency: 2.049684348610314e-5
allele num: 97576
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+18411A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10447A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+18411A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10447A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+18411A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10447A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.60-20976A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10447A>T
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10062
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23477
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2471
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2686
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2859
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3902
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22570
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1438
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ

3-93733209-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93733209
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93733209
    reference: chr 3
allele count: 1
allele frequency: 9.892175289346128e-6
allele num: 101090
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10457A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+18421A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.60-20966A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+18421A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+18421A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10457A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10457A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10457A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5506
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1562
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

3-93733210-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93733210
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93733210
    reference: chr 3
allele count: 1
allele frequency: 9.858432903505658e-6
allele num: 101436
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10458A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.60-20965A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10458A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+18422A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10458A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+18422A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+18422A>T
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10458A>T
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31780
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3920
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32882
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5410
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

3-93733211-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93733211
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93733211
    reference: chr 3
allele count: 3
allele frequency: 2.948229097055702e-5
allele num: 101756
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+18423A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+18423A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.60-20964A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10459A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10459A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10459A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10459A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+18423A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32263
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2789
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2869
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1399
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5288
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-93733215-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93733215
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93733216
    reference: chr 3
allele count: 1
allele frequency: 9.723653760136909e-6
allele num: 102842
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.60-20960_60-20959insC
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10463_380+10464insC
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000178750
  ensembl protein: ENSP00000320679
  ensembl transcript: ENST00000315099
  gene symbol: STX19
  hgvsc: ENST00000315099.2:c.*13_*14insG
  variant of: http://identifiers.org/hgnc/19300
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10463_71+10464insC
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+18427_130+18428insC
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10463_*232+10464insC
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10463_380+10464insC
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+18427_336+18428insC
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+18427_-463+18428insC
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: 3' UTR
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4881
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3974
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3708
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34365
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4880
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2868
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD

3-93733216-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93733216
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93733216
    reference: chr 3
allele count: 1
allele frequency: 9.703650513323113e-6
allele num: 103054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+18428T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10464T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10464T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.60-20959T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+18428T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+18428T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000178750
  ensembl protein: ENSP00000320679
  ensembl transcript: ENST00000315099
  gene symbol: STX19
  hgvsc: ENST00000315099.2:c.*13A>G
  variant of: http://identifiers.org/hgnc/19300
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10464T>C
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10464T>C
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: 3' UTR
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 8203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4813
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2744
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3933
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34896
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2869
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

3-93733216-TAAAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93733216
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93733212
    reference: chr 3
allele count: 1
allele frequency: 9.703650513323113e-6
allele num: 103054
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+18429_336+18432delAAAA
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10465_380+10468delAAAA
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000178750
  ensembl protein: ENSP00000320679
  ensembl transcript: ENST00000315099
  gene symbol: STX19
  hgvsc: ENST00000315099.2:c.*9_*12delTTTT
  variant of: http://identifiers.org/hgnc/19300
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+18429_130+18432delAAAA
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10465_380+10468delAAAA
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10465_*232+10468delAAAA
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10465_71+10468delAAAA
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.60-20958_60-20955delAAAA
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+18429_-463+18432delAAAA
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: 3' UTR
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3933
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2744
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4813
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34896
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2869
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1591
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3688
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: TAAAA
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

3-93733217-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93733217
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 93733217
    reference: chr 3
allele count: 3
allele frequency: 2.902757619738752e-5
allele num: 103350
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000420780
  ensembl transcript: ENST00000471138
  gene symbol: ARL13B
  hgvsc: ENST00000471138.1:c.380+10465A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000335400
  ensembl transcript: ENST00000335438
  gene symbol: ARL13B
  hgvsc: ENST00000335438.3:c.*232+10465A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000445145
  ensembl transcript: ENST00000535334
  gene symbol: ARL13B
  hgvsc: ENST00000535334.1:c.71+10465A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000377769
  ensembl transcript: ENST00000394222
  gene symbol: ARL13B
  hgvsc: ENST00000394222.3:c.380+10465A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000306225
  ensembl transcript: ENST00000303097
  gene symbol: ARL13B
  hgvsc: ENST00000303097.7:c.60-20958A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000437977
  ensembl transcript: ENST00000539730
  gene symbol: ARL13B
  hgvsc: ENST00000539730.1:c.-463+18429A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000178750
  ensembl protein: ENSP00000320679
  ensembl transcript: ENST00000315099
  gene symbol: STX19
  hgvsc: ENST00000315099.2:c.*12T>C
  variant of: http://identifiers.org/hgnc/19300
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl protein: ENSP00000417263
  ensembl transcript: ENST00000460371
  gene symbol: ARL13B
  hgvsc: ENST00000460371.1:c.130+18429A>G
  variant of: http://identifiers.org/hgnc/25419
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000169379
  ensembl transcript: ENST00000486562
  gene symbol: ARL13B
  hgvsc: ENST00000486562.1:n.336+18429A>G
  variant of: http://identifiers.org/hgnc/25419
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3878
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4731
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-93733221-T-TTTTTTTG
type: Variant
location: Region
allele count: 1
allele frequency: 9.565716472163766e-6
allele num: 104540
alternate allele: TTTTTTTG
canonical: true
consequence: 3' UTR
filter: VQSRTrancheINDEL99.50to99.90
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 413
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.75e1
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African
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DP
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GenotypeQuality
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African
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European (Finnish)
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Other
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East Asian
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European (Non-Finnish)
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BaseQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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East Asian
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African
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European (Finnish)
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VQSLOD
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DP
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ReadPosRankSum
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FS
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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East Asian
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Other
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South Asian
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MQ
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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DP
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FS
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InbreedingCoeff
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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East Asian
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European (Finnish)
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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DP
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MQ
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VQSLOD
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ClippingRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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DP
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QD
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InbreedingCoeff
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MQ
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FS
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VQSLOD
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MQ
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African
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VQSLOD
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MQ
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ReadPosRankSum
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SIO_000300: -9.13e-1

DP
type: SiteQuality
SIO_000300: 2.051607e6

GenotypeQuality
all individuals: 345
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20475
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 99
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5585
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4189
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11105
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2997
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5091
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4667
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.762176595156984e-4
allele num: 65166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.049710277523635e-4
allele num: 6558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

DP
type: SiteQuality
SIO_000300: 2.067899e6

MQ
type: SiteQuality
SIO_000300: 5.971e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.727e0

MQRankSum
type: SiteQuality
SIO_000300: 1.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.05e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.229e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-2

GenotypeQuality
all individuals: 989
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
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GenotypeQuality
all individuals: 248
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variant carriers: 0

GenotypeQuality
all individuals: 222
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GenotypeQuality
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GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 5164
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20492
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11392
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.216249087813184e-4
allele num: 16444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527837193668643e-5
allele num: 65452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.52e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.46e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.69e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.08852e6

FS
type: SiteQuality
SIO_000300: 2.179e0

QD
type: SiteQuality
SIO_000300: 1.014e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

GenotypeQuality
all individuals: 178
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3070
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5748
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12390
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variant carriers: 0

GenotypeQuality
all individuals: 40
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variant carriers: 0

GenotypeQuality
all individuals: 212
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variant carriers: 0

GenotypeQuality
all individuals: 972
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variant carriers: 0

GenotypeQuality
all individuals: 70
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variant carriers: 0

GenotypeQuality
all individuals: 2687
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variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
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variant carriers: 0

GenotypeQuality
all individuals: 5177
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variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 4235
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variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4743
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65498
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.082725060827251e-5
allele num: 16440
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.89e0

FS
type: SiteQuality
SIO_000300: 1.072e0

QD
type: SiteQuality
SIO_000300: 1.166e1

VQSLOD
type: SiteQuality
SIO_000300: -4.192e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e0

DP
type: SiteQuality
SIO_000300: 2.089345e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.029e0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4246
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variant carriers: 0

GenotypeQuality
all individuals: 974
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variant carriers: 0

GenotypeQuality
all individuals: 4753
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variant carriers: 0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 2693
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variant carriers: 0

GenotypeQuality
all individuals: 5762
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5194
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variant carriers: 0

GenotypeQuality
all individuals: 159
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variant carriers: 0

GenotypeQuality
all individuals: 3078
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20500
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.038637307852098e-4
allele num: 9628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.168e0

FS
type: SiteQuality
SIO_000300: 1.595e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

QD
type: SiteQuality
SIO_000300: 6.24e0

DP
type: SiteQuality
SIO_000300: 2.090171e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.28e-1

GenotypeQuality
all individuals: 12679
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4765
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variant carriers: 0

GenotypeQuality
all individuals: 909
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 3086
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variant carriers: 0

GenotypeQuality
all individuals: 99
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variant carriers: 0

GenotypeQuality
all individuals: 20508
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 176
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 162
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variant carriers: 0

GenotypeQuality
all individuals: 4251
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
all individuals: 5778
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5210
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.046922608165752e-5
allele num: 65640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.05e-1

QD
type: SiteQuality
SIO_000300: 1.739e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

DP
type: SiteQuality
SIO_000300: 2.092995e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.09e0

VQSLOD
type: SiteQuality
SIO_000300: -2.283e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3089
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5211
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variant carriers: 0

GenotypeQuality
all individuals: 2696
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 12859
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variant carriers: 0

GenotypeQuality
all individuals: 5785
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4766
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GenotypeQuality
all individuals: 4256
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variant carriers: 0

GenotypeQuality
all individuals: 20507
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variant carriers: 1

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.177024482109228e-4
allele num: 8496
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.12e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 8.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.182e0

VQSLOD
type: SiteQuality
SIO_000300: 3.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 1.084e1

DP
type: SiteQuality
SIO_000300: 2.095712e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

GenotypeQuality
all individuals: 48
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5236
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 4784
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GenotypeQuality
all individuals: 45
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GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 20515
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 521
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GenotypeQuality
all individuals: 4263
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GenotypeQuality
all individuals: 5879
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GenotypeQuality
all individuals: 3109
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variant carriers: 0

GenotypeQuality
all individuals: 29
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GenotypeQuality
all individuals: 13417
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9962
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509206157561123e-5
allele num: 66260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

DP
type: SiteQuality
SIO_000300: 2.106841e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.214e0

QD
type: SiteQuality
SIO_000300: 1.454e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.65e-1

GenotypeQuality
all individuals: 5888
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 20514
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 2
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 497
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13483
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 42
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GenotypeQuality
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GenotypeQuality
all individuals: 4789
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variant carriers: 0

GenotypeQuality
all individuals: 46
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GenotypeQuality
all individuals: 2707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3110
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9990
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.549e0

VQSLOD
type: SiteQuality
SIO_000300: 1.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.423e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

DP
type: SiteQuality
SIO_000300: 2.107454e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 1.12e1

MQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

GenotypeQuality
all individuals: 472
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5887
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variant carriers: 0

GenotypeQuality
all individuals: 3110
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13512
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5240
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20519
bin: 9.75e1
variant carriers: 6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.044317154054869e-5
allele num: 66340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.108388e6

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-1

MQ
type: SiteQuality
SIO_000300: 5.92e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.18e0

FS
type: SiteQuality
SIO_000300: 6.723e0

QD
type: SiteQuality
SIO_000300: 1.387e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20520
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5240
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011050555538827e-5
allele num: 66422
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.109909e6

VQSLOD
type: SiteQuality
SIO_000300: 5.75e-1

FS
type: SiteQuality
SIO_000300: 5.85e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.403e0

MQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.398e0

QD
type: SiteQuality
SIO_000300: 1.0e1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2710
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5244
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504347564461293e-5
allele num: 66474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.719e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 3.327e0

DP
type: SiteQuality
SIO_000300: 2.111533e6

VQSLOD
type: SiteQuality
SIO_000300: 7.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.15e-1

QD
type: SiteQuality
SIO_000300: 1.439e1

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4265
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variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20522
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2711
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5250
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.342e0

FS
type: SiteQuality
SIO_000300: 4.959e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 2.113388e6

QD
type: SiteQuality
SIO_000300: 8.85e0

MQRankSum
type: SiteQuality
SIO_000300: -2.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.31e-1

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5927
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variant carriers: 0

GenotypeQuality
all individuals: 196
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variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 13766
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5251
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4265
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20524
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004085556356645e-5
allele num: 66576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.472e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.43e0

FS
type: SiteQuality
SIO_000300: 1.0382e1

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e0

DP
type: SiteQuality
SIO_000300: 2.114143e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.611e1

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5253
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20522
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4266
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 1.298e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 2.114852e6

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: -2.37e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.83e0

QD
type: SiteQuality
SIO_000300: 1.736e1

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5936
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
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GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 5253
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.106e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.34e-1

FS
type: SiteQuality
SIO_000300: 1.605e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

DP
type: SiteQuality
SIO_000300: 2.116471e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.4e-1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13901
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variant carriers: 0

GenotypeQuality
all individuals: 5253
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4793
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3117
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.468208092485549e-4
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.116935e6

MQRankSum
type: SiteQuality
SIO_000300: 6.27e-1

QD
type: SiteQuality
SIO_000300: 1.372e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

MQ
type: SiteQuality
SIO_000300: 5.881e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.253e-1

FS
type: SiteQuality
SIO_000300: 8.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

GenotypeQuality
all individuals: 5936
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3120
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499700059988002e-5
allele num: 66680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.493e1

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.28e-1

FS
type: SiteQuality
SIO_000300: 4.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.96e-1

DP
type: SiteQuality
SIO_000300: 2.117045e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.17e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.938360147315371e-4
allele num: 10318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 2.117512e6

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.99e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.56e0

QD
type: SiteQuality
SIO_000300: 1.474e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2711
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.463e1

DP
type: SiteQuality
SIO_000300: 2.117595e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.199e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.320000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.46e-1

GenotypeQuality
all individuals: 4792
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.29e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

FS
type: SiteQuality
SIO_000300: 1.41e0

QD
type: SiteQuality
SIO_000300: 1.419e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

DP
type: SiteQuality
SIO_000300: 2.117584e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.11773e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.0e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 3.7e1

QD
type: SiteQuality
SIO_000300: 1.103e1

FS
type: SiteQuality
SIO_000300: 1.5885e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
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SIO_000300: 2.118626e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.83e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.64e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.275e0

ClippingRankSum
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MQRankSum
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VQSLOD
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QD
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MQ
type: SiteQuality
SIO_000300: 5.865e1

ReadPosRankSum
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 14002
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.496133325340207e-5
allele num: 66724
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.32e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

FS
type: SiteQuality
SIO_000300: 8.067e0

QD
type: SiteQuality
SIO_000300: 1.279e1

ClippingRankSum
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SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: 6.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.4e-2

DP
type: SiteQuality
SIO_000300: 2.119518e6

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.303e0

DP
type: SiteQuality
SIO_000300: 2.119331e6

MQRankSum
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SIO_000300: 8.27e-1

ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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VQSLOD
type: SiteQuality
SIO_000300: 7.7e-1

BaseQRankSum
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SIO_000300: 5.83e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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SIO_000300: 1.77e0

ClippingRankSum
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SIO_000300: 1.04e0

InbreedingCoeff
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SIO_000300: 0.0e0

DP
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BaseQRankSum
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SIO_000300: -1.603e0

QD
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FS
type: SiteQuality
SIO_000300: 3.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-2

MQ
type: SiteQuality
SIO_000300: 5.988e1

VQSLOD
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SIO_000300: -2.374e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: -1.28e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.17e0

DP
type: SiteQuality
SIO_000300: 2.119548e6

FS
type: SiteQuality
SIO_000300: 1.063e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.281000000000001e0

QD
type: SiteQuality
SIO_000300: 1.272e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.211680600993578e-4
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.762e0

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.04e-1

InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 2.997422216893472e-5
allele num: 66724
num of homozygotes: 0

ClippingRankSum
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InbreedingCoeff
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MQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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DP
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BaseQRankSum
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QD
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MQ
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SIO_000300: 5.978e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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Other
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BaseQRankSum
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FS
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MQ
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QD
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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European (Finnish)
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East Asian
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Other
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South Asian
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MQRankSum
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FS
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DP
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ClippingRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.997871511227029e-5
allele num: 66714
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.932e1

ClippingRankSum
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SIO_000300: 1.6e0

ReadPosRankSum
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SIO_000300: -9.14e-1

VQSLOD
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FS
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SIO_000300: 3.358e0

BaseQRankSum
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SIO_000300: -5.992e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.119617e6

MQRankSum
type: SiteQuality
SIO_000300: -4.51e-1

QD
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SIO_000300: 1.332e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.541e1

FS
type: SiteQuality
SIO_000300: 8.58e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
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SIO_000300: -1.194e0

ReadPosRankSum
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SIO_000300: 9.419999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.119312e6

VQSLOD
type: SiteQuality
SIO_000300: 8.03e-1

BaseQRankSum
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SIO_000300: 3.59e0

MQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66710
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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Latino
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allele count: 0
allele frequency: 0.0e0
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East Asian
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MQRankSum
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MQ
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SIO_000300: 5.882e1

ReadPosRankSum
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SIO_000300: 4.17e-1

DP
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SIO_000300: 2.119233e6

VQSLOD
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QD
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ClippingRankSum
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SIO_000300: 1.34e-1

BaseQRankSum
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SIO_000300: 5.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

FS
type: SiteQuality
SIO_000300: 5.869e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.119187e6

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

BaseQRankSum
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SIO_000300: 1.8e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.9e-1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.27e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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DP
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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FS
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VQSLOD
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QD
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BaseQRankSum
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MQ
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SIO_000300: 5.958e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66684
num of homozygotes: 0

East Asian
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South Asian
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Other
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African
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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FS
type: SiteQuality
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ClippingRankSum
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VQSLOD
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MQ
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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allele num: 10402
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Other
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Latino
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ReadPosRankSum
type: SiteQuality
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DP
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VQSLOD
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MQRankSum
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InbreedingCoeff
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MQ
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QD
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BaseQRankSum
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ClippingRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 66684
num of homozygotes: 0

European (Finnish)
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East Asian
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Latino
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African
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Other
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South Asian
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ClippingRankSum
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ReadPosRankSum
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FS
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MQRankSum
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DP
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InbreedingCoeff
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MQ
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VQSLOD
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4793
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5246
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.35e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.566e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.722e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

DP
type: SiteQuality
SIO_000300: 2.116963e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e0

QD
type: SiteQuality
SIO_000300: 1.201e1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5242
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20523
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4263
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3103
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13785
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.925298421255295e-4
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999490086685263e-5
allele num: 66678
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.467e0

MQ
type: SiteQuality
SIO_000300: 5.909e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.256e0

DP
type: SiteQuality
SIO_000300: 2.116651e6

FS
type: SiteQuality
SIO_000300: 5.287e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.91e-1

QD
type: SiteQuality
SIO_000300: 1.059e1

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3101
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5873
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5234
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20527
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.248554913294797e-4
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.197e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.982e1

FS
type: SiteQuality
SIO_000300: 2.127e0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

MQRankSum
type: SiteQuality
SIO_000300: -5.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.054e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.115632e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

GenotypeQuality
all individuals: 5784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12868
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20569
bin: 9.75e1
variant carriers: 44

GenotypeQuality
all individuals: 3095
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4260
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5212
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

African
type: Population
allele count: 42
allele frequency: 4.059539918809201e-3
allele num: 10346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730103806228374e-4
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 7.07e-1

DP
type: SiteQuality
SIO_000300: 2.111799e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.362e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: 4.55e0

QD
type: SiteQuality
SIO_000300: 1.297e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

GenotypeQuality
all individuals: 5784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5212
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4260
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4776
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.325259515570934e-4
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 44
allele frequency: 4.252851343514402e-3
allele num: 10346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.501395432584101e-5
allele num: 66646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.362e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e-1

DP
type: SiteQuality
SIO_000300: 2.111799e6

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: 4.55e0

QD
type: SiteQuality
SIO_000300: 1.297e1

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 2711
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4270
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4780
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.252e0

DP
type: SiteQuality
SIO_000300: 2.110349e6

MQ
type: SiteQuality
SIO_000300: 5.932e1

QD
type: SiteQuality
SIO_000300: 4.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

GenotypeQuality
all individuals: 314
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4759
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 5175
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5682
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20562
bin: 9.75e1
variant carriers: 53

GenotypeQuality
all individuals: 11590
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 54
allele frequency: 5.263157894736842e-3
allele num: 10260
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.32e-1

QD
type: SiteQuality
SIO_000300: 1.369e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.956e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

DP
type: SiteQuality
SIO_000300: 2.106925e6

MQRankSum
type: SiteQuality
SIO_000300: 4.47e-1

GenotypeQuality
all individuals: 341
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4768
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10472
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1022
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5209
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2713
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20540
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4274
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5624
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e-1

DP
type: SiteQuality
SIO_000300: 2.108263e6

VQSLOD
type: SiteQuality
SIO_000300: 4.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.48e-2

QD
type: SiteQuality
SIO_000300: 1.229e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

GenotypeQuality
all individuals: 3315
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1239
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5926
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2475
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3220
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6553
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1406
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3463
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2842
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 5614
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.128923007450892e-4
allele num: 8858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6264
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.298364061282784e-4
allele num: 7702
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.352400558782443e-5
allele num: 54404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7664
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.41e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.18e-1

DP
type: SiteQuality
SIO_000300: 1.022309e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.775e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

QD
type: SiteQuality
SIO_000300: 1.547e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.23e-1

GenotypeQuality
all individuals: 955
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5405
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2839
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 560
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1130
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3447
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2502
bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6654
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.839114282561518e-5
allele num: 54374
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.743e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e0

QD
type: SiteQuality
SIO_000300: 5.87e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.027519e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3073
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6290
num of homozygotes: 0

African
type: Population
allele count: 24
allele frequency: 2.7002700270027e-3
allele num: 8888
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.888780867198133e-4
allele num: 10286
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.290655653071761e-4
allele num: 7748
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7694
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.043102e6

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.11e0

FS
type: SiteQuality
SIO_000300: 9.44e-1

QD
type: SiteQuality
SIO_000300: 1.484e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 12255
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.666361136571952e-5
allele num: 54550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e0

QD
type: SiteQuality
SIO_000300: 1.49e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

DP
type: SiteQuality
SIO_000300: 1.047871e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2859
bin: 9.75e1
variant carriers: 10

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.824018677951262e-5
allele num: 54824
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 8.982708286548395e-4
allele num: 8906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7794
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.112001e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.682e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.83e-1

QD
type: SiteQuality
SIO_000300: 1.142e1

GenotypeQuality
all individuals: 454
bin: 1.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 420
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7736
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.119820828667413e-4
allele num: 8930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6286
num of homozygotes: 0

Latino
type: Population
allele count: 16
allele frequency: 1.554605518849592e-3
allele num: 10292
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.304601899196493e-5
allele num: 54760
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.62e-1

DP
type: SiteQuality
SIO_000300: 1.127621e6

FS
type: SiteQuality
SIO_000300: 3.249e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.570000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.29e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.0e-2

QD
type: SiteQuality
SIO_000300: 1.183e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1108
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55432
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.561475409836066e-4
allele num: 7808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8988
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7892
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.150918e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.95e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.9e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

FS
type: SiteQuality
SIO_000300: 9.183999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.214e0

QD
type: SiteQuality
SIO_000300: 1.163e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 456
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8074
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10730
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.223690651003426e-4
allele num: 8172
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

QD
type: SiteQuality
SIO_000300: 1.091e1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

DP
type: SiteQuality
SIO_000300: 1.253918e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 320
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GenotypeQuality
all individuals: 2866
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8096
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.081314878892734e-4
allele num: 9248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57936
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.49e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.89e-1

DP
type: SiteQuality
SIO_000300: 1.260608e6

VQSLOD
type: SiteQuality
SIO_000300: -3.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.186e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.58e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8098
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9264
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.266123054114158e-5
allele num: 10792
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.438316600192546e-5
allele num: 58168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.379999999999999e-1

FS
type: SiteQuality
SIO_000300: 2.145e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.942e1

DP
type: SiteQuality
SIO_000300: 1.268468e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.42e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1424
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GenotypeQuality
all individuals: 541
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4094
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58916
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.222792858889704e-4
allele num: 8178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6458
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.287881e6

FS
type: SiteQuality
SIO_000300: 3.936e0

MQRankSum
type: SiteQuality
SIO_000300: -4.298e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.125e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.863e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

MQ
type: SiteQuality
SIO_000300: 5.369e1

VQSLOD
type: SiteQuality
SIO_000300: 7.12e-1

QD
type: SiteQuality
SIO_000300: 8.720000000000001e0

GenotypeQuality
all individuals: 238
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1183
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3688
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4819
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1175
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4110
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.692906720839682e-5
allele num: 59070
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.3e0

QD
type: SiteQuality
SIO_000300: 1.025e1

MQRankSum
type: SiteQuality
SIO_000300: -6.73e-1

FS
type: SiteQuality
SIO_000300: 9.218999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

DP
type: SiteQuality
SIO_000300: 1.29299e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.38e-1

GenotypeQuality
all individuals: 1428
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1183
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4819
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4110
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.222792858889704e-4
allele num: 8178
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

QD
type: SiteQuality
SIO_000300: 1.025e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.21e-1

FS
type: SiteQuality
SIO_000300: 9.218999999999999e0

DP
type: SiteQuality
SIO_000300: 1.29299e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.38e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.3e0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
all individuals: 462
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4106
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3660
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1589
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35449
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1065
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2871
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 203
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9346
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10912
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.57824427480916e-4
allele num: 8384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8200
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-2

QD
type: SiteQuality
SIO_000300: 1.522e1

FS
type: SiteQuality
SIO_000300: 1.899e0

VQSLOD
type: SiteQuality
SIO_000300: 2.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

DP
type: SiteQuality
SIO_000300: 1.298622e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-1