1-207697020-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697020
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697020
    reference: chr 1
allele count: 1
allele frequency: 8.323206765102459e-6
allele num: 120146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.552T>A
  hgvsp: ENSP00000356019.1:p.Asn184Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12021T>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12021T>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.552T>A
  hgvsp: ENSP00000436139.1:p.Asn184Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.552T>A
  hgvsp: ENSP00000383744.2:p.Asn184Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.552T>A
  hgvsp: ENSP00000356016.4:p.Asn184Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12021T>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.479T>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.479T>A
  hgvsp: ENSP00000434718.1:p.Asn160Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.673T>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.552T>A
  hgvsp: ENSP00000356020.1:p.Asn184Lys
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn184Lys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-207697025-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697025
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697025
    reference: chr 1
allele count: 1
allele frequency: 8.357989402069439e-6
allele num: 119646
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.557A>C
  hgvsp: ENSP00000383744.2:p.His186Pro
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.557A>C
  hgvsp: ENSP00000436139.1:p.His186Pro
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12026A>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.557A>C
  hgvsp: ENSP00000356016.4:p.His186Pro
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.484A>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12026A>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12026A>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.678A>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.557A>C
  hgvsp: ENSP00000356020.1:p.His186Pro
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.484A>C
  hgvsp: ENSP00000434718.1:p.His162Pro
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.557A>C
  hgvsp: ENSP00000356019.1:p.His186Pro
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14970
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His186Pro
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

1-207697027-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697027
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697027
    reference: chr 1
allele count: 2
allele frequency: 1.676080653001022e-5
allele num: 119326
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.486T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.486T>G
  hgvsp: ENSP00000434718.1:p.Tyr163Asp
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.559T>G
  hgvsp: ENSP00000356016.4:p.Tyr187Asp
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.559T>G
  hgvsp: ENSP00000356020.1:p.Tyr187Asp
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12028T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.559T>G
  hgvsp: ENSP00000356019.1:p.Tyr187Asp
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.680T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12028T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.559T>G
  hgvsp: ENSP00000383744.2:p.Tyr187Asp
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.559T>G
  hgvsp: ENSP00000436139.1:p.Tyr187Asp
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12028T>G
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6058
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr187Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

1-207697028-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697028
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697028
    reference: chr 1
allele count: 1
allele frequency: 8.380965151946898e-6
allele num: 119318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.681A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.560A>G
  hgvsp: ENSP00000356016.4:p.Tyr187Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.560A>G
  hgvsp: ENSP00000356020.1:p.Tyr187Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.560A>G
  hgvsp: ENSP00000436139.1:p.Tyr187Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.560A>G
  hgvsp: ENSP00000383744.2:p.Tyr187Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12029A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.487A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12029A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12029A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.487A>G
  hgvsp: ENSP00000434718.1:p.Tyr163Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.560A>G
  hgvsp: ENSP00000356019.1:p.Tyr187Cys
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr187Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

1-207697048-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697048
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697048
    reference: chr 1
allele count: 3
allele frequency: 2.670084374666239e-5
allele num: 112356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.580C>T
  hgvsp: ENSP00000383744.2:p.Arg194Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12049C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12049C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.580C>T
  hgvsp: ENSP00000356016.4:p.Arg194Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.580C>T
  hgvsp: ENSP00000436139.1:p.Arg194Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.580C>T
  hgvsp: ENSP00000356019.1:p.Arg194Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.507C>T
  hgvsp: ENSP00000434718.1:p.Arg170Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.507C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.580C>T
  hgvsp: ENSP00000356020.1:p.Arg194Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.701C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12049C>T
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11265
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10798
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12734
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10663
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg194Cys
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

1-207697049-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697049
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697049
    reference: chr 1
allele count: 4
allele frequency: 3.561570652657822e-5
allele num: 112310
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.581G>A
  hgvsp: ENSP00000356016.4:p.Arg194His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12050G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.581G>A
  hgvsp: ENSP00000356019.1:p.Arg194His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.508G>A
  hgvsp: ENSP00000434718.1:p.Arg170His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.581G>A
  hgvsp: ENSP00000383744.2:p.Arg194His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.702G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.581G>A
  hgvsp: ENSP00000356020.1:p.Arg194His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12050G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.508G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.581G>A
  hgvsp: ENSP00000436139.1:p.Arg194His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12050G>A
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10699
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10790
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg194His
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

1-207697054-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697054
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697054
    reference: chr 1
allele count: 7
allele frequency: 6.379294632279231e-5
allele num: 109730
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.513A>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.586A>T
  hgvsp: ENSP00000436139.1:p.Asn196Tyr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.513A>T
  hgvsp: ENSP00000434718.1:p.Asn172Tyr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.586A>T
  hgvsp: ENSP00000356016.4:p.Asn196Tyr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12055A>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.707A>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.586A>T
  hgvsp: ENSP00000356019.1:p.Asn196Tyr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.586A>T
  hgvsp: ENSP00000356020.1:p.Asn196Tyr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12055A>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.586A>T
  hgvsp: ENSP00000383744.2:p.Asn196Tyr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12055A>T
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12812
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10385
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13232
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9162
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asn196Tyr
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

1-207697058-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697058
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697058
    reference: chr 1
allele count: 3
allele frequency: 2.756744835698008e-5
allele num: 108824
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12059C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.517C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.590C>T
  hgvsp: ENSP00000356020.1:p.Pro197Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.711C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12059C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.590C>T
  hgvsp: ENSP00000383744.2:p.Pro197Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.590C>T
  hgvsp: ENSP00000356019.1:p.Pro197Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12059C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.590C>T
  hgvsp: ENSP00000356016.4:p.Pro197Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.517C>T
  hgvsp: ENSP00000434718.1:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.590C>T
  hgvsp: ENSP00000436139.1:p.Pro197Leu
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4769
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12615
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13517
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10763
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro197Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-207697065-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697065
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697065
    reference: chr 1
allele count: 6
allele frequency: 5.584824171119012e-5
allele num: 107434
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12066C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.597C>T
  hgvsp: ENST00000534202.1:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.524C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.524C>T
  hgvsp: ENST00000529814.1:c.524C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.597C>T
  hgvsp: ENST00000400960.2:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12066C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.597C>T
  hgvsp: ENST00000367053.1:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12066C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.597C>T
  hgvsp: ENST00000367049.4:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.597C>T
  hgvsp: ENST00000367052.1:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.718C>T
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12304
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3111
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12929
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7236
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser199Ser
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

1-207697066-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697066
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697066
    reference: chr 1
allele count: 4
allele frequency: 3.726268328582341e-5
allele num: 107346
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12067G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.598G>A
  hgvsp: ENSP00000356016.4:p.Gly200Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.598G>A
  hgvsp: ENSP00000383744.2:p.Gly200Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.598G>A
  hgvsp: ENSP00000356020.1:p.Gly200Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.525G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.525G>A
  hgvsp: ENSP00000434718.1:p.Gly176Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.598G>A
  hgvsp: ENSP00000356019.1:p.Gly200Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12067G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.598G>A
  hgvsp: ENSP00000436139.1:p.Gly200Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12067G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.719G>A
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12823
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12298
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7250
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly200Arg
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

1-207697080-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697080
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697080
    reference: chr 1
allele count: 1
allele frequency: 9.285051067780874e-6
allele num: 107700
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.539G>T
  hgvsp: ENST00000529814.1:c.539G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12081G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.733G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12081G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.612G>T
  hgvsp: ENST00000534202.1:c.612G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.612G>T
  hgvsp: ENST00000367052.1:c.612G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.612G>T
  hgvsp: ENST00000367049.4:c.612G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.612G>T
  hgvsp: ENST00000400960.2:c.612G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.539G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.612G>T
  hgvsp: ENST00000367053.1:c.612G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12081G>T
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 19083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10852
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8783
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val204Val
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

1-207697083-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697083
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697083
    reference: chr 1
allele count: 1
allele frequency: 9.25805914048179e-6
allele num: 108014
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.542T>C
  hgvsp: ENST00000529814.1:c.542T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.615T>C
  hgvsp: ENST00000367053.1:c.615T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.542T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.615T>C
  hgvsp: ENST00000534202.1:c.615T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.736T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12084T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12084T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.615T>C
  hgvsp: ENST00000367052.1:c.615T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.615T>C
  hgvsp: ENST00000400960.2:c.615T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.615T>C
  hgvsp: ENST00000367049.4:c.615T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12084T>C
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe205Phe
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

1-207697084-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697084
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697084
    reference: chr 1
allele count: 2
allele frequency: 1.852091937843795e-5
allele num: 107986
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.543G>C
  hgvsp: ENSP00000434718.1:p.Glu182Gln
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.616G>C
  hgvsp: ENSP00000356019.1:p.Glu206Gln
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.543G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.616G>C
  hgvsp: ENSP00000356020.1:p.Glu206Gln
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12085G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12085G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.616G>C
  hgvsp: ENSP00000436139.1:p.Glu206Gln
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.616G>C
  hgvsp: ENSP00000356016.4:p.Glu206Gln
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.616G>C
  hgvsp: ENSP00000383744.2:p.Glu206Gln
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12085G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.737G>C
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9153
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4970
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9974
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu206Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

1-207697090-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697090
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697090
    reference: chr 1
allele count: 1
allele frequency: 9.227986637875348e-6
allele num: 108366
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.622G>A
  hgvsp: ENSP00000356016.4:p.Val208Met
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.622G>A
  hgvsp: ENSP00000383744.2:p.Val208Met
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.549G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.622G>A
  hgvsp: ENSP00000436139.1:p.Val208Met
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.549G>A
  hgvsp: ENSP00000434718.1:p.Val184Met
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12091G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.622G>A
  hgvsp: ENSP00000356020.1:p.Val208Met
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12091G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12091G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.743G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.622G>A
  hgvsp: ENSP00000356019.1:p.Val208Met
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9715
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val208Met
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

1-207697092-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697092
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697092
    reference: chr 1
allele count: 1
allele frequency: 9.221519337526051e-6
allele num: 108442
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12093G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.551G>A
  hgvsp: ENST00000529814.1:c.551G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.624G>A
  hgvsp: ENST00000534202.1:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.624G>A
  hgvsp: ENST00000367049.4:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.624G>A
  hgvsp: ENST00000400960.2:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12093G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.745G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12093G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.624G>A
  hgvsp: ENST00000367053.1:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.551G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.624G>A
  hgvsp: ENST00000367052.1:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24307
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val208Val
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-207697095-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697095
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697095
    reference: chr 1
allele count: 2
allele frequency: 1.839994112018841e-5
allele num: 108696
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.627T>C
  hgvsp: ENST00000367052.1:c.627T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.627T>C
  hgvsp: ENST00000534202.1:c.627T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.627T>C
  hgvsp: ENST00000400960.2:c.627T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.627T>C
  hgvsp: ENST00000367053.1:c.627T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12096T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12096T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.554T>C
  hgvsp: ENST00000529814.1:c.554T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.627T>C
  hgvsp: ENST00000367049.4:c.627T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12096T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.748T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.554T>C
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10094
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6894
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25103
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly209Gly
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

1-207697096-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697096
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697096
    reference: chr 1
allele count: 1
allele frequency: 9.200647725599883e-6
allele num: 108688
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.628G>A
  hgvsp: ENSP00000356016.4:p.Glu210Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.628G>A
  hgvsp: ENSP00000356019.1:p.Glu210Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.749G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.628G>A
  hgvsp: ENSP00000436139.1:p.Glu210Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12097G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.555G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.628G>A
  hgvsp: ENSP00000356020.1:p.Glu210Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12097G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.628G>A
  hgvsp: ENSP00000383744.2:p.Glu210Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.555G>A
  hgvsp: ENSP00000434718.1:p.Glu186Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12097G>A
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6753
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu210Lys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

1-207697097-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697097
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697097
    reference: chr 1
allele count: 2
allele frequency: 1.838235294117647e-5
allele num: 108800
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.750A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.556A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12098A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.629A>G
  hgvsp: ENSP00000356016.4:p.Glu210Gly
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.629A>G
  hgvsp: ENSP00000436139.1:p.Glu210Gly
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.629A>G
  hgvsp: ENSP00000356019.1:p.Glu210Gly
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.629A>G
  hgvsp: ENSP00000356020.1:p.Glu210Gly
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.556A>G
  hgvsp: ENSP00000434718.1:p.Glu186Gly
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12098A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12098A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.629A>G
  hgvsp: ENSP00000383744.2:p.Glu210Gly
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25245
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6635
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4973
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu210Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

1-207697105-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697105
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697105
    reference: chr 1
allele count: 2
allele frequency: 1.826250525047026e-5
allele num: 109514
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.564A>G
  hgvsp: ENSP00000434718.1:p.Ile189Val
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.637A>G
  hgvsp: ENSP00000356016.4:p.Ile213Val
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.637A>G
  hgvsp: ENSP00000383744.2:p.Ile213Val
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.758A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12106A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.637A>G
  hgvsp: ENSP00000356020.1:p.Ile213Val
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12106A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12106A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.637A>G
  hgvsp: ENSP00000436139.1:p.Ile213Val
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.637A>G
  hgvsp: ENSP00000356019.1:p.Ile213Val
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.564A>G
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5359
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4683
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile213Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

1-207697108-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697108
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697108
    reference: chr 1
allele count: 12
allele frequency: 1.094111854701946e-4
allele num: 109678
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.567T>C
  hgvsp: ENSP00000434718.1:p.Tyr190His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.761T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.640T>C
  hgvsp: ENSP00000436139.1:p.Tyr214His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12109T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.567T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.640T>C
  hgvsp: ENSP00000356020.1:p.Tyr214His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.640T>C
  hgvsp: ENSP00000356019.1:p.Tyr214His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12109T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.640T>C
  hgvsp: ENSP00000356016.4:p.Tyr214His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12109T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.640T>C
  hgvsp: ENSP00000383744.2:p.Tyr214His
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3608
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27104
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr214His
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum

1-207697113-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697113
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697113
    reference: chr 1
allele count: 1
allele frequency: 9.080672696233337e-6
allele num: 110124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12114C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.572C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.645C>T
  hgvsp: ENST00000367053.1:c.645C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.572C>T
  hgvsp: ENST00000529814.1:c.572C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.645C>T
  hgvsp: ENST00000367049.4:c.645C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.645C>T
  hgvsp: ENST00000367052.1:c.645C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.645C>T
  hgvsp: ENST00000400960.2:c.645C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.645C>T
  hgvsp: ENST00000534202.1:c.645C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12114C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.766C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12114C>T
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys215Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

1-207697122-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697122
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697122
    reference: chr 1
allele count: 1
allele frequency: 9.046826373308244e-6
allele num: 110536
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12123T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.654T>G
  hgvsp: ENSP00000383744.2:p.Asn218Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.654T>G
  hgvsp: ENSP00000436139.1:p.Asn218Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.654T>G
  hgvsp: ENSP00000356020.1:p.Asn218Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.654T>G
  hgvsp: ENSP00000356019.1:p.Asn218Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.654T>G
  hgvsp: ENSP00000356016.4:p.Asn218Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12123T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12123T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.581T>G
  hgvsp: ENSP00000434718.1:p.Asn194Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.775T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.581T>G
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn218Lys
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD

1-207697125-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697125
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697125
    reference: chr 1
allele count: 2
allele frequency: 1.807860577792241e-5
allele num: 110628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.657C>T
  hgvsp: ENST00000400960.2:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.657C>T
  hgvsp: ENST00000534202.1:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.657C>T
  hgvsp: ENST00000367053.1:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.584C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.657C>T
  hgvsp: ENST00000367052.1:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.657C>T
  hgvsp: ENST00000367049.4:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12126C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12126C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12126C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.778C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.584C>T
  hgvsp: ENST00000529814.1:c.584C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4037
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12317
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp219Asp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD

1-207697126-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697126
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697126
    reference: chr 1
allele count: 2
allele frequency: 1.806978551164598e-5
allele num: 110682
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12127G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.585G>A
  hgvsp: ENSP00000434718.1:p.Asp196Asn
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.658G>A
  hgvsp: ENSP00000356016.4:p.Asp220Asn
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.658G>A
  hgvsp: ENSP00000356020.1:p.Asp220Asn
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.779G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.658G>A
  hgvsp: ENSP00000436139.1:p.Asp220Asn
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12127G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.658G>A
  hgvsp: ENSP00000356019.1:p.Asp220Asn
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12127G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.658G>A
  hgvsp: ENSP00000383744.2:p.Asp220Asn
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.585G>A
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12451
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp220Asn
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

1-207697128-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697128
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697128
    reference: chr 1
allele count: 1
allele frequency: 9.024619161071403e-6
allele num: 110808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.660T>C
  hgvsp: ENST00000367052.1:c.660T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.660T>C
  hgvsp: ENST00000367049.4:c.660T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12129T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.660T>C
  hgvsp: ENST00000367053.1:c.660T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.660T>C
  hgvsp: ENST00000400960.2:c.660T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.587T>C
  hgvsp: ENST00000529814.1:c.587T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.587T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.660T>C
  hgvsp: ENST00000534202.1:c.660T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.781T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12129T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12129T>C
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp220Asp
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

1-207697145-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697145
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697145
    reference: chr 1
allele count: 1
allele frequency: 9.021199819576003e-6
allele num: 110850
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.677G>C
  hgvsp: ENSP00000436139.1:p.Ser226Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.677G>C
  hgvsp: ENSP00000383744.2:p.Ser226Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12146G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.677G>C
  hgvsp: ENSP00000356019.1:p.Ser226Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.677G>C
  hgvsp: ENSP00000356016.4:p.Ser226Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.798G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.604G>C
  hgvsp: ENSP00000434718.1:p.Ser202Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.677G>C
  hgvsp: ENSP00000356020.1:p.Ser226Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.604G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12146G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12146G>C
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13373
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser226Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-207697146-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697146
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697146
    reference: chr 1
allele count: 1
allele frequency: 9.036852283612572e-6
allele num: 110658
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12147C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.678C>A
  hgvsp: ENSP00000383744.2:p.Ser226Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.678C>A
  hgvsp: ENSP00000356020.1:p.Ser226Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.799C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12147C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.678C>A
  hgvsp: ENSP00000356016.4:p.Ser226Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.678C>A
  hgvsp: ENSP00000356019.1:p.Ser226Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.605C>A
  hgvsp: ENSP00000434718.1:p.Ser202Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.678C>A
  hgvsp: ENSP00000436139.1:p.Ser226Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.605C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12147C>A
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13501
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser226Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

1-207697146-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697146
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697146
    reference: chr 1
allele count: 3
allele frequency: 2.711055685083771e-5
allele num: 110658
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.678C>T
  hgvsp: ENST00000367049.4:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.605C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12147C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.605C>T
  hgvsp: ENST00000529814.1:c.605C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12147C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12147C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.678C>T
  hgvsp: ENST00000367053.1:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.678C>T
  hgvsp: ENST00000400960.2:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.678C>T
  hgvsp: ENST00000534202.1:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.799C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.678C>T
  hgvsp: ENST00000367052.1:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser226Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-207697147-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697147
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697147
    reference: chr 1
allele count: 4
allele frequency: 3.609521918821852e-5
allele num: 110818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.606G>A
  hgvsp: ENSP00000434718.1:p.Gly203Ser
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.679G>A
  hgvsp: ENSP00000356019.1:p.Gly227Ser
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12148G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.800G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.679G>A
  hgvsp: ENSP00000356016.4:p.Gly227Ser
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12148G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.679G>A
  hgvsp: ENSP00000383744.2:p.Gly227Ser
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.679G>A
  hgvsp: ENSP00000356020.1:p.Gly227Ser
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.679G>A
  hgvsp: ENSP00000436139.1:p.Gly227Ser
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.606G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12148G>A
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26824
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly227Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum

1-207697152-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697152
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697152
    reference: chr 1
allele count: 163
allele frequency: 1.47377938517179e-3
allele num: 110600
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.611C>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.611C>G
  hgvsp: ENST00000529814.1:c.611C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.805C>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.684C>G
  hgvsp: ENST00000367052.1:c.684C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12153C>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.684C>G
  hgvsp: ENST00000367053.1:c.684C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12153C>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.684C>G
  hgvsp: ENST00000367049.4:c.684C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.684C>G
  hgvsp: ENST00000534202.1:c.684C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12153C>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.684C>G
  hgvsp: ENST00000400960.2:c.684C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3994
  bin: 3.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 26387
  bin: 2.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13877
  bin: 2.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3386
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 1.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 4.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
hgvs: p.Pro228Pro
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

1-207697152-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697152
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697152
    reference: chr 1
allele count: 2
allele frequency: 1.808318264014467e-5
allele num: 110600
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12153C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.684C>T
  hgvsp: ENST00000367049.4:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.684C>T
  hgvsp: ENST00000367053.1:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12153C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.684C>T
  hgvsp: ENST00000367052.1:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.684C>T
  hgvsp: ENST00000534202.1:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.611C>T
  hgvsp: ENST00000529814.1:c.611C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.611C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.805C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.684C>T
  hgvsp: ENST00000400960.2:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12153C>T
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro228Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP

1-207697153-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697153
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697153
    reference: chr 1
allele count: 9
allele frequency: 8.162228832619895e-5
allele num: 110264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12154G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.612G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.612G>A
  hgvsp: ENSP00000434718.1:p.Ala205Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12154G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.685G>A
  hgvsp: ENSP00000356019.1:p.Ala229Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.685G>A
  hgvsp: ENSP00000356020.1:p.Ala229Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.685G>A
  hgvsp: ENSP00000356016.4:p.Ala229Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12154G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.685G>A
  hgvsp: ENSP00000436139.1:p.Ala229Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.806G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.685G>A
  hgvsp: ENSP00000383744.2:p.Ala229Thr
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13748
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala229Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

1-207697153-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697153
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697153
    reference: chr 1
allele count: 1
allele frequency: 9.069143147355437e-6
allele num: 110264
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12154G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.685G>C
  hgvsp: ENSP00000356020.1:p.Ala229Pro
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.806G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.685G>C
  hgvsp: ENSP00000356019.1:p.Ala229Pro
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.612G>C
  hgvsp: ENSP00000434718.1:p.Ala205Pro
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.685G>C
  hgvsp: ENSP00000436139.1:p.Ala229Pro
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12154G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.612G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.685G>C
  hgvsp: ENSP00000383744.2:p.Ala229Pro
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12154G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.685G>C
  hgvsp: ENSP00000356016.4:p.Ala229Pro
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala229Pro
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-207697155-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697155
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697155
    reference: chr 1
allele count: 64
allele frequency: 5.799728137743543e-4
allele num: 110350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.614C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.687C>T
  hgvsp: ENST00000367052.1:c.687C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.687C>T
  hgvsp: ENST00000367049.4:c.687C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.614C>T
  hgvsp: ENST00000529814.1:c.614C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.687C>T
  hgvsp: ENST00000534202.1:c.687C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12156C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.808C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.687C>T
  hgvsp: ENST00000400960.2:c.687C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12156C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12156C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.687C>T
  hgvsp: ENST00000367053.1:c.687C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26249
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3951
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13770
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
hgvs: p.Ala229Ala
num of homozygotes: 1
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

1-207697158-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697158
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697158
    reference: chr 1
allele count: 1
allele frequency: 9.076716407072577e-6
allele num: 110172
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12159T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12159T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.617T>G
  hgvsp: ENST00000529814.1:c.617T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.690T>G
  hgvsp: ENST00000400960.2:c.690T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.690T>G
  hgvsp: ENST00000367049.4:c.690T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.690T>G
  hgvsp: ENST00000534202.1:c.690T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.690T>G
  hgvsp: ENST00000367052.1:c.690T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12159T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.690T>G
  hgvsp: ENST00000367053.1:c.690T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.811T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.617T>G
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro230Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

1-207697161-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697161
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697161
    reference: chr 1
allele count: 1
allele frequency: 9.089256498818396e-6
allele num: 110020
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.693G>C
  hgvsp: ENSP00000383744.2:p.Gln231His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.693G>C
  hgvsp: ENSP00000436139.1:p.Gln231His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12162G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.693G>C
  hgvsp: ENSP00000356019.1:p.Gln231His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.693G>C
  hgvsp: ENSP00000356016.4:p.Gln231His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.620G>C
  hgvsp: ENSP00000434718.1:p.Gln207His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12162G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12162G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.693G>C
  hgvsp: ENSP00000356020.1:p.Gln231His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.620G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.814G>C
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln231His
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

1-207697163-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697163
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697163
    reference: chr 1
allele count: 5
allele frequency: 4.552158633624065e-5
allele num: 109838
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.695G>T
  hgvsp: ENSP00000356019.1:p.Cys232Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.622G>T
  hgvsp: ENSP00000434718.1:p.Cys208Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.695G>T
  hgvsp: ENSP00000383744.2:p.Cys232Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.622G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.816G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.695G>T
  hgvsp: ENSP00000356020.1:p.Cys232Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.695G>T
  hgvsp: ENSP00000356016.4:p.Cys232Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.695G>T
  hgvsp: ENSP00000436139.1:p.Cys232Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12164G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12164G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12164G>T
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25862
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys232Phe
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

1-207697169-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697169
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697169
    reference: chr 1
allele count: 21
allele frequency: 1.915464180819819e-4
allele num: 109634
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.701T>C
  hgvsp: ENSP00000356020.1:p.Ile234Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.822T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.628T>C
  hgvsp: ENSP00000434718.1:p.Ile210Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.701T>C
  hgvsp: ENSP00000356016.4:p.Ile234Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12170T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.628T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.701T>C
  hgvsp: ENSP00000383744.2:p.Ile234Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.701T>C
  hgvsp: ENSP00000356019.1:p.Ile234Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.701T>C
  hgvsp: ENSP00000436139.1:p.Ile234Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12170T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12170T>C
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25466
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13208
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile234Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

1-207697184-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697184
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697184
    reference: chr 1
allele count: 32
allele frequency: 2.939447383891828e-4
allele num: 108864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.716C>T
  hgvsp: ENSP00000383744.2:p.Thr239Met
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.643C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.716C>T
  hgvsp: ENSP00000356016.4:p.Thr239Met
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.716C>T
  hgvsp: ENSP00000436139.1:p.Thr239Met
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.837C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.716C>T
  hgvsp: ENSP00000356019.1:p.Thr239Met
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12185C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.643C>T
  hgvsp: ENSP00000434718.1:p.Thr215Met
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.716C>T
  hgvsp: ENSP00000356020.1:p.Thr239Met
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12185C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12185C>T
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24360
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13115
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr239Met
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS

1-207697185-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697185
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697185
    reference: chr 1
allele count: 7
allele frequency: 6.437018373089585e-5
allele num: 108746
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.717G>A
  hgvsp: ENST00000367052.1:c.717G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.717G>A
  hgvsp: ENST00000367049.4:c.717G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.717G>A
  hgvsp: ENST00000534202.1:c.717G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12186G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.717G>A
  hgvsp: ENST00000367053.1:c.717G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12186G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12186G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.644G>A
  hgvsp: ENST00000529814.1:c.644G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.717G>A
  hgvsp: ENST00000400960.2:c.717G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.644G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.838G>A
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13142
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr239Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-207697187-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697187
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697187
    reference: chr 1
allele count: 1
allele frequency: 9.19303535641398e-6
allele num: 108778
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.719C>T
  hgvsp: ENSP00000356016.4:p.Pro240Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.719C>T
  hgvsp: ENSP00000383744.2:p.Pro240Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.719C>T
  hgvsp: ENSP00000356019.1:p.Pro240Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.719C>T
  hgvsp: ENSP00000436139.1:p.Pro240Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.840C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.719C>T
  hgvsp: ENSP00000356020.1:p.Pro240Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12188C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.646C>T
  hgvsp: ENSP00000434718.1:p.Pro216Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.646C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12188C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12188C>T
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 24303
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro240Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum

1-207697190-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697190
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697190
    reference: chr 1
allele count: 1
allele frequency: 9.199124243372031e-6
allele num: 108706
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.649C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.722C>T
  hgvsp: ENSP00000356020.1:p.Pro241Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.722C>T
  hgvsp: ENSP00000356019.1:p.Pro241Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12191C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.843C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.722C>T
  hgvsp: ENSP00000383744.2:p.Pro241Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.649C>T
  hgvsp: ENSP00000434718.1:p.Pro217Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12191C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.722C>T
  hgvsp: ENSP00000356016.4:p.Pro241Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.722C>T
  hgvsp: ENSP00000436139.1:p.Pro241Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12191C>T
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro241Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

1-207697208-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697208
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697208
    reference: chr 1
allele count: 1
allele frequency: 9.220328981338055e-6
allele num: 108456
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.740T>C
  hgvsp: ENSP00000356020.1:p.Ile247Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.740T>C
  hgvsp: ENSP00000356016.4:p.Ile247Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.740T>C
  hgvsp: ENSP00000383744.2:p.Ile247Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.667T>C
  hgvsp: ENSP00000434718.1:p.Ile223Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.740T>C
  hgvsp: ENSP00000436139.1:p.Ile247Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.740T>C
  hgvsp: ENSP00000356019.1:p.Ile247Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12209T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.667T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12209T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12209T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.861T>C
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13022
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile247Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP

1-207697212-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697212
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697212
    reference: chr 1
allele count: 1
allele frequency: 9.223730814639905e-6
allele num: 108416
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.865G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.744G>C
  hgvsp: ENSP00000356020.1:p.Leu248Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.744G>C
  hgvsp: ENSP00000436139.1:p.Leu248Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.744G>C
  hgvsp: ENSP00000356016.4:p.Leu248Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.744G>C
  hgvsp: ENSP00000383744.2:p.Leu248Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.671G>C
  hgvsp: ENSP00000434718.1:p.Leu224Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12213G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.671G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12213G>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.744G>C
  hgvsp: ENSP00000356019.1:p.Leu248Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12213G>C
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu248Phe
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-207697215-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697215
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697215
    reference: chr 1
allele count: 1
allele frequency: 9.218629005494302e-6
allele num: 108476
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.747A>G
  hgvsp: ENST00000367049.4:c.747A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.674A>G
  hgvsp: ENST00000529814.1:c.674A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.868A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12216A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12216A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.747A>G
  hgvsp: ENST00000400960.2:c.747A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.747A>G
  hgvsp: ENST00000367053.1:c.747A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12216A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.747A>G
  hgvsp: ENST00000367052.1:c.747A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.674A>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.747A>G
  hgvsp: ENST00000534202.1:c.747A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4128
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val249Val
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-207697221-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697221
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697221
    reference: chr 1
allele count: 1
allele frequency: 9.219648915769288e-6
allele num: 108464
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.680C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12222C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.753C>A
  hgvsp: ENSP00000356016.4:p.Asp251Glu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.753C>A
  hgvsp: ENSP00000436139.1:p.Asp251Glu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.753C>A
  hgvsp: ENSP00000356020.1:p.Asp251Glu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.874C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.680C>A
  hgvsp: ENSP00000434718.1:p.Asp227Glu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12222C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.753C>A
  hgvsp: ENSP00000383744.2:p.Asp251Glu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12222C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.753C>A
  hgvsp: ENSP00000356019.1:p.Asp251Glu
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4327
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp251Glu
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-207697224-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697224
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697224
    reference: chr 1
allele count: 1
allele frequency: 9.218798974869553e-6
allele num: 108474
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.756C>G
  hgvsp: ENSP00000356016.4:p.Asn252Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12225C>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.756C>G
  hgvsp: ENSP00000356019.1:p.Asn252Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.756C>G
  hgvsp: ENSP00000356020.1:p.Asn252Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.683C>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.756C>G
  hgvsp: ENSP00000436139.1:p.Asn252Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.756C>G
  hgvsp: ENSP00000383744.2:p.Asn252Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.877C>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12225C>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.683C>G
  hgvsp: ENSP00000434718.1:p.Asn228Lys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12225C>G
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3947
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn252Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

1-207697234-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697234
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697234
    reference: chr 1
allele count: 1
allele frequency: 9.20352679146649e-6
allele num: 108654
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.766T>A
  hgvsp: ENSP00000356019.1:p.Phe256Ile
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.693T>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12235T>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.887T>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.766T>A
  hgvsp: ENSP00000436139.1:p.Phe256Ile
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12235T>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.766T>A
  hgvsp: ENSP00000356020.1:p.Phe256Ile
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12235T>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.693T>A
  hgvsp: ENSP00000434718.1:p.Phe232Ile
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.766T>A
  hgvsp: ENSP00000356016.4:p.Phe256Ile
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.766T>A
  hgvsp: ENSP00000383744.2:p.Phe256Ile
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12774
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe256Ile
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

1-207697234-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697234
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697234
    reference: chr 1
allele count: 1
allele frequency: 9.20352679146649e-6
allele num: 108654
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.766T>C
  hgvsp: ENSP00000383744.2:p.Phe256Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.766T>C
  hgvsp: ENSP00000436139.1:p.Phe256Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12235T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.693T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.693T>C
  hgvsp: ENSP00000434718.1:p.Phe232Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.766T>C
  hgvsp: ENSP00000356020.1:p.Phe256Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.887T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12235T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12235T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.766T>C
  hgvsp: ENSP00000356019.1:p.Phe256Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.766T>C
  hgvsp: ENSP00000356016.4:p.Phe256Leu
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe256Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

1-207697249-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697249
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697249
    reference: chr 1
allele count: 1
allele frequency: 9.159522239319997e-6
allele num: 109176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12250G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.708G>A
  hgvsp: ENSP00000434718.1:p.Val237Ile
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.781G>A
  hgvsp: ENSP00000356020.1:p.Val261Ile
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.781G>A
  hgvsp: ENSP00000436139.1:p.Val261Ile
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.781G>A
  hgvsp: ENSP00000356019.1:p.Val261Ile
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.781G>A
  hgvsp: ENSP00000356016.4:p.Val261Ile
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12250G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.902G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.781G>A
  hgvsp: ENSP00000383744.2:p.Val261Ile
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12250G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.708G>A
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 13137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val261Ile
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ

1-207697263-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697263
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697263
    reference: chr 1
allele count: 2
allele frequency: 1.818247936288592e-5
allele num: 109996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.916G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.795G>A
  hgvsp: ENST00000367049.4:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.722G>A
  hgvsp: ENST00000529814.1:c.722G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.722G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.795G>A
  hgvsp: ENST00000534202.1:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.795G>A
  hgvsp: ENST00000367052.1:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.795G>A
  hgvsp: ENST00000367053.1:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.795G>A
  hgvsp: ENST00000400960.2:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12264G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12264G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12264G>A
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13622
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Arg265Arg
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

1-207697272-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697272
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697271
    reference: chr 1
allele count: 1
allele frequency: 8.993614533681087e-6
allele num: 111190
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.733delG
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12275delG
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.806delG
  hgvsp: ENSP00000356016.4:p.Gly269AlafsTer4
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.733delG
  hgvsp: ENSP00000434718.1:p.Gly245AlafsTer4
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.806delG
  hgvsp: ENSP00000436139.1:p.Gly269AlafsTer4
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.927delG
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.806delG
  hgvsp: ENSP00000356019.1:p.Gly269AlafsTer4
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.806delG
  hgvsp: ENSP00000383744.2:p.Gly269AlafsTer4
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12275delG
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.806delG
  hgvsp: ENSP00000356020.1:p.Gly269AlafsTer4
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12275delG
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25192
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly269AlafsTer4
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: TG
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

1-207697280-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697280
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697280
    reference: chr 1
allele count: 1
allele frequency: 8.90614702267505e-6
allele num: 112282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.739T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.812T>G
  hgvsp: ENSP00000356019.1:p.Val271Gly
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12281T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12281T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.812T>G
  hgvsp: ENSP00000356016.4:p.Val271Gly
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.739T>G
  hgvsp: ENSP00000434718.1:p.Val247Gly
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.933T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.812T>G
  hgvsp: ENSP00000383744.2:p.Val271Gly
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.812T>G
  hgvsp: ENSP00000356020.1:p.Val271Gly
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.812T>G
  hgvsp: ENSP00000436139.1:p.Val271Gly
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12281T>G
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 25656
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val271Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS

1-207697283-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697283
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697283
    reference: chr 1
allele count: 1
allele frequency: 8.875634607874463e-6
allele num: 112668
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.815T>C
  hgvsp: ENSP00000383744.2:p.Met272Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.936T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12284T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.742T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12284T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.815T>C
  hgvsp: ENSP00000356016.4:p.Met272Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12284T>C
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.815T>C
  hgvsp: ENSP00000356020.1:p.Met272Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.815T>C
  hgvsp: ENSP00000356019.1:p.Met272Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.742T>C
  hgvsp: ENSP00000434718.1:p.Met248Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.815T>C
  hgvsp: ENSP00000436139.1:p.Met272Thr
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met272Thr
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

1-207697283-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697283
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697283
    reference: chr 1
allele count: 2
allele frequency: 1.775126921574893e-5
allele num: 112668
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12284T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.815T>G
  hgvsp: ENSP00000356016.4:p.Met272Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.815T>G
  hgvsp: ENSP00000356019.1:p.Met272Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.815T>G
  hgvsp: ENSP00000383744.2:p.Met272Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12284T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.936T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12284T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.815T>G
  hgvsp: ENSP00000436139.1:p.Met272Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.742T>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.815T>G
  hgvsp: ENSP00000356020.1:p.Met272Arg
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.742T>G
  hgvsp: ENSP00000434718.1:p.Met248Arg
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met272Arg
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-207697291-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697291
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697291
    reference: chr 1
allele count: 1
allele frequency: 8.807468733485996e-6
allele num: 113540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.823C>A
  hgvsp: ENSP00000356019.1:p.Pro275Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.823C>A
  hgvsp: ENSP00000356020.1:p.Pro275Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12292C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.823C>A
  hgvsp: ENSP00000383744.2:p.Pro275Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.750C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.823C>A
  hgvsp: ENSP00000356016.4:p.Pro275Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.823C>A
  hgvsp: ENSP00000436139.1:p.Pro275Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.750C>A
  hgvsp: ENSP00000434718.1:p.Pro251Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.944C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12292C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12292C>A
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5515
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro275Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum

1-207697291-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697291
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697291
    reference: chr 1
allele count: 1
allele frequency: 8.807468733485996e-6
allele num: 113540
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.823C>G
  hgvsp: ENSP00000356016.4:p.Pro275Ala
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12292C>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.944C>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.823C>G
  hgvsp: ENSP00000436139.1:p.Pro275Ala
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.823C>G
  hgvsp: ENSP00000356019.1:p.Pro275Ala
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.823C>G
  hgvsp: ENSP00000356020.1:p.Pro275Ala
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.823C>G
  hgvsp: ENSP00000383744.2:p.Pro275Ala
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.750C>G
  hgvsp: ENSP00000434718.1:p.Pro251Ala
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12292C>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.750C>G
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12292C>G
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro275Ala
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-207697294-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697294
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697294
    reference: chr 1
allele count: 1
allele frequency: 8.779168788299123e-6
allele num: 113906
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.753C>T
  hgvsp: ENSP00000434718.1:p.Arg252Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.826C>T
  hgvsp: ENSP00000356019.1:p.Arg276Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.826C>T
  hgvsp: ENSP00000356020.1:p.Arg276Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.753C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.826C>T
  hgvsp: ENSP00000436139.1:p.Arg276Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.826C>T
  hgvsp: ENSP00000383744.2:p.Arg276Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.826C>T
  hgvsp: ENSP00000356016.4:p.Arg276Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.947C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12295C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12295C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12295C>T
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25958
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg276Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-207697295-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697295
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697295
    reference: chr 1
allele count: 13
allele frequency: 1.13869278068777e-4
allele num: 114166
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.827G>A
  hgvsp: ENSP00000356016.4:p.Arg276His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.827G>A
  hgvsp: ENSP00000383744.2:p.Arg276His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12296G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.827G>A
  hgvsp: ENSP00000356020.1:p.Arg276His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12296G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.827G>A
  hgvsp: ENSP00000436139.1:p.Arg276His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.754G>A
  hgvsp: ENSP00000434718.1:p.Arg252His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.948G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12296G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.827G>A
  hgvsp: ENSP00000356019.1:p.Arg276His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.754G>A
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15279
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5799
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg276His
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/1-207697297-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697297
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697297
    reference: chr 1
allele count: 1
allele frequency: 8.735150244584206e-6
allele num: 114480
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.756C>A
  hgvsp: ENSP00000434718.1:p.Arg253Ser
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.829C>A
  hgvsp: ENSP00000383744.2:p.Arg277Ser
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.950C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12298C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.829C>A
  hgvsp: ENSP00000356020.1:p.Arg277Ser
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.829C>A
  hgvsp: ENSP00000356016.4:p.Arg277Ser
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.829C>A
  hgvsp: ENSP00000356019.1:p.Arg277Ser
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.756C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12298C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12298C>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.829C>A
  hgvsp: ENSP00000436139.1:p.Arg277Ser
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15412
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg277Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

1-207697297-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697297
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697297
    reference: chr 1
allele count: 26
allele frequency: 2.271139063591894e-4
allele num: 114480
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.829C>T
  hgvsp: ENSP00000356016.4:p.Arg277Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.829C>T
  hgvsp: ENSP00000356019.1:p.Arg277Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12298C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.829C>T
  hgvsp: ENSP00000356020.1:p.Arg277Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12298C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.829C>T
  hgvsp: ENSP00000436139.1:p.Arg277Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.756C>T
  hgvsp: ENSP00000434718.1:p.Arg253Cys
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12298C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.756C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.950C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.829C>T
  hgvsp: ENSP00000383744.2:p.Arg277Cys
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26049
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15412
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg277Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-207697298-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697298
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697298
    reference: chr 1
allele count: 26
allele frequency: 2.267099159429389e-4
allele num: 114684
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.830G>A
  hgvsp: ENSP00000383744.2:p.Arg277His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.830G>A
  hgvsp: ENSP00000356016.4:p.Arg277His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.830G>A
  hgvsp: ENSP00000356020.1:p.Arg277His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12299G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.951G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.757G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12299G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.830G>A
  hgvsp: ENSP00000436139.1:p.Arg277His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.757G>A
  hgvsp: ENSP00000434718.1:p.Arg253His
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12299G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.830G>A
  hgvsp: ENSP00000356019.1:p.Arg277His
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15525
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26047
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg277His
num of homozygotes: 1
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

1-207697307-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697307
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697307
    reference: chr 1
allele count: 4
allele frequency: 3.446136880556896e-5
allele num: 116072
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.839G>T
  hgvsp: ENSP00000436139.1:p.Cys280Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.839G>T
  hgvsp: ENSP00000383744.2:p.Cys280Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.839G>T
  hgvsp: ENSP00000356016.4:p.Cys280Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12308G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.766G>T
  hgvsp: ENSP00000434718.1:p.Cys256Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12308G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.766G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.839G>T
  hgvsp: ENSP00000356020.1:p.Cys280Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.960G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.839G>T
  hgvsp: ENSP00000356019.1:p.Cys280Phe
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12308G>T
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27393
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16524
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6514
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys280Phe
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

1-207697312-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697312
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697312
    reference: chr 1
allele count: 1
allele frequency: 8.578830876928093e-6
allele num: 116566
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.844G>A
  hgvsp: ENSP00000383744.2:p.Ala282Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.771G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.844G>A
  hgvsp: ENSP00000436139.1:p.Ala282Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.844G>A
  hgvsp: ENSP00000356016.4:p.Ala282Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12313G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.965G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.771G>A
  hgvsp: ENSP00000434718.1:p.Ala258Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.844G>A
  hgvsp: ENSP00000356020.1:p.Ala282Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12313G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.844G>A
  hgvsp: ENSP00000356019.1:p.Ala282Thr
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12313G>A
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala282Thr
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

1-207697317-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697317
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697317
    reference: chr 1
allele count: 244
allele frequency: 2.08857617311215e-3
allele num: 116826
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.776G>A
  hgvsp: ENST00000529814.1:c.776G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.849G>A
  hgvsp: ENST00000367052.1:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.849G>A
  hgvsp: ENST00000367049.4:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12318G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12318G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.849G>A
  hgvsp: ENST00000400960.2:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.970G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.849G>A
  hgvsp: ENST00000534202.1:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.776G>A
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.849G>A
  hgvsp: ENST00000367053.1:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12318G>A
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16811
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 27588
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
hgvs: p.Leu283Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

1-207697323-A-AGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697323
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697325
    reference: chr 1
allele count: 1
allele frequency: 8.542189875796559e-6
allele num: 117066
alternate allele: AGC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.976_977insGC
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.855_856insGC
  hgvsp: ENSP00000436139.1:p.Trp286AlafsTer71
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.855_856insGC
  hgvsp: ENSP00000356016.4:p.Trp286AlafsTer71
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12324_487+12325insGC
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12324_414+12325insGC
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.855_856insGC
  hgvsp: ENSP00000356020.1:p.Trp286AlafsTer71
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.855_856insGC
  hgvsp: ENSP00000356019.1:p.Trp286AlafsTer71
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.782_783insGC
  hgvsp: ENSP00000434718.1:p.Trp262AlafsTer71
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12324_414+12325insGC
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.855_856insGC
  hgvsp: ENSP00000383744.2:p.Trp286AlafsTer71
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.782_783insGC
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16879
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp286AlafsTer71
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

1-207697325-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697325
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697325
    reference: chr 1
allele count: 1
allele frequency: 8.535627710061798e-6
allele num: 117156
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.857G>T
  hgvsp: ENSP00000356016.4:p.Trp286Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.857G>T
  hgvsp: ENSP00000356020.1:p.Trp286Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.978G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.784G>T
  hgvsp: ENSP00000434718.1:p.Trp262Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.857G>T
  hgvsp: ENSP00000356019.1:p.Trp286Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.857G>T
  hgvsp: ENSP00000436139.1:p.Trp286Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12326G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.784G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12326G>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.857G>T
  hgvsp: ENSP00000383744.2:p.Trp286Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12326G>T
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16932
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp286Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

1-207697331-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 207697331
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 207697331
    reference: chr 1
allele count: 2
allele frequency: 1.705698739488632e-5
allele num: 117254
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356020
  ensembl transcript: ENST00000367053
  gene symbol: CR1
  hgvsc: ENST00000367053.1:c.863C>T
  hgvsp: ENSP00000356020.1:p.Pro288Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000434718
  ensembl transcript: ENST00000529814
  gene symbol: CR1
  hgvsc: ENST00000529814.1:c.790C>T
  hgvsp: ENSP00000434718.1:p.Pro264Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000383744
  ensembl transcript: ENST00000400960
  gene symbol: CR1
  hgvsc: ENST00000400960.2:c.863C>T
  hgvsp: ENSP00000383744.2:p.Pro288Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000367050
  gene symbol: CR1
  hgvsc: ENST00000367050.4:n.984C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356016
  ensembl transcript: ENST00000367049
  gene symbol: CR1
  hgvsc: ENST00000367049.4:c.863C>T
  hgvsp: ENSP00000356016.4:p.Pro288Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000436139
  ensembl transcript: ENST00000534202
  gene symbol: CR1
  hgvsc: ENST00000534202.1:c.863C>T
  hgvsp: ENSP00000436139.1:p.Pro288Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000436595
  gene symbol: CR1
  hgvsc: ENST00000436595.1:n.414+12332C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000450439
  gene symbol: CR1
  hgvsc: ENST00000450439.1:n.414+12332C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000203710
  ensembl transcript: ENST00000434033
  gene symbol: CR1
  hgvsc: ENST00000434033.1:n.790C>T
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356019
  ensembl transcript: ENST00000367052
  gene symbol: CR1
  hgvsc: ENST00000367052.1:c.863C>T
  hgvsp: ENSP00000356019.1:p.Pro288Leu
  variant of: http://identifiers.org/hgnc/2334
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000203710
  ensembl protein: ENSP00000356018
  ensembl transcript: ENST00000367051
  gene symbol: CR1
  hgvsc: ENST00000367051.1:c.487+12332C>T
  variant of: http://identifiers.org/hgnc/2334
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16964
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6893
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro288Leu
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 43710
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4111
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1478
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1523
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6188
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505117399157134e-5
allele num: 66440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.39e0

MQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

DP
type: SiteQuality
SIO_000300: 1.635894e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 2.466e1

FS
type: SiteQuality
SIO_000300: 2.261e0

VQSLOD
type: SiteQuality
SIO_000300: -6.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.04e-1

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42338
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 934
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4111
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1835
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1465
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6030
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1492
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
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South Asian
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allele frequency: 6.0790273556231e-5
allele num: 16450
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -4.0e-4

ReadPosRankSum
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ClippingRankSum
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VQSLOD
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MQRankSum
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FS
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QD
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SIO_000300: 8.5e0

BaseQRankSum
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SIO_000300: 8.95e-1

DP
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SIO_000300: 1.621633e6

MQ
type: SiteQuality
SIO_000300: 2.78e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65978
num of homozygotes: 0

South Asian
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allele frequency: 1.218620521569583e-4
allele num: 16412
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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InbreedingCoeff
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MQ
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MQRankSum
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ClippingRankSum
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DP
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FS
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BaseQRankSum
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QD
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.515840533575868e-5
allele num: 65970
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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QD
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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DP
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MQRankSum
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MQ
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BaseQRankSum
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SIO_000300: 3.91e0

ClippingRankSum
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SIO_000300: -7.36e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.616501244705958e-5
allele num: 61862
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.108893324462187e-4
allele num: 9018
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.250781347668459e-5
allele num: 15998
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FS
type: SiteQuality
SIO_000300: 7.879e0

InbreedingCoeff
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MQ
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VQSLOD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.229e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9010
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.233525189161224e-5
allele num: 61852
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.250468925847193e-4
allele num: 15994
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MQ
type: SiteQuality
SIO_000300: 3.151e1

QD
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DP
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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FS
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VQSLOD
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BaseQRankSum
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SIO_000300: -4.29e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15856
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.657440249279014e-5
allele num: 60334
num of homozygotes: 0

African
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Latino
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allele frequency: 5.988023952095808e-4
allele num: 10020
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East Asian
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allele count: 0
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allele num: 7512
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
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MQ
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.344257909169955e-5
allele num: 59804
num of homozygotes: 0

African
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Latino
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South Asian
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East Asian
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FS
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VQSLOD
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MQRankSum
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DP
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ClippingRankSum
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BaseQRankSum
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QD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 1
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allele num: 816
num of homozygotes: 0

Latino
type: Population
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allele num: 9742
num of homozygotes: 0

East Asian
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allele frequency: 2.743484224965707e-4
allele num: 7290
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African
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allele num: 8598
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South Asian
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European (Finnish)
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European (Non-Finnish)
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allele num: 58952
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FS
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DP
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQ
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QD
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SIO_000300: 1.122e1

GenotypeQuality
all individuals: 428
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1449
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9052
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3880
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5878
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3000
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3066
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.164144353899884e-4
allele num: 8590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.093897510782083e-5
allele num: 58894
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.300161e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.12e-1

QD
type: SiteQuality
SIO_000300: 1.757e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.1e-2

MQ
type: SiteQuality
SIO_000300: 3.076e1

VQSLOD
type: SiteQuality
SIO_000300: -4.027e0

FS
type: SiteQuality
SIO_000300: 1.154e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

GenotypeQuality
all individuals: 875
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4106
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1423
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.366493577480186e-4
allele num: 7318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59032
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6338
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.956e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e0

MQ
type: SiteQuality
SIO_000300: 3.605e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.828e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e0

DP
type: SiteQuality
SIO_000300: 1.355555e6

QD
type: SiteQuality
SIO_000300: 1.33e1

GenotypeQuality
all individuals: 8900
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4022
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.012965964343598e-4
allele num: 9872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15824
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6348
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.84e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.341e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.705e0

DP
type: SiteQuality
SIO_000300: 1.368355e6

QD
type: SiteQuality
SIO_000300: 1.036e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.474e0

FS
type: SiteQuality
SIO_000300: 6.953e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

MQ
type: SiteQuality
SIO_000300: 2.992e1

GenotypeQuality
all individuals: 8770
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3889
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2967
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1439
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23638
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2632
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4017
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4107
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 958
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1400
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6344
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.37986277757123e-5
allele num: 59174
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15822
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.248e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

DP
type: SiteQuality
SIO_000300: 1.373498e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 3.402e1

VQSLOD
type: SiteQuality
SIO_000300: -5.231e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.69e-1

FS
type: SiteQuality
SIO_000300: 2.452e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

GenotypeQuality
all individuals: 1496
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2907
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1775
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4342
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4107
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 680
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2436
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8245
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27362
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1479
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 727
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.002606777621817e-4
allele num: 9974
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.66e-1

MQ
type: SiteQuality
SIO_000300: 2.962e1

FS
type: SiteQuality
SIO_000300: 2.447e0

VQSLOD
type: SiteQuality
SIO_000300: -4.477e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

QD
type: SiteQuality
SIO_000300: 1.291e1

DP
type: SiteQuality
SIO_000300: 1.40543e6

GenotypeQuality
all individuals: 569
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28260
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1000
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 727
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GenotypeQuality
all individuals: 1532
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4105
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15930
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9984
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.684863189109044e-5
allele num: 59352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.549e0

FS
type: SiteQuality
SIO_000300: 2.13e0

MQRankSum
type: SiteQuality
SIO_000300: -7.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

QD
type: SiteQuality
SIO_000300: 9.77e0

DP
type: SiteQuality
SIO_000300: 1.415155e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.070000000000001e-1

MQ
type: SiteQuality
SIO_000300: 2.858e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e-1

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 900
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GenotypeQuality
all individuals: 287
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
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variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4107
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2378
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7422
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.986886548778065e-4
allele num: 10066
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15960
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59434
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.77e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

MQ
type: SiteQuality
SIO_000300: 2.879e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

FS
type: SiteQuality
SIO_000300: 1.285e0

MQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

DP
type: SiteQuality
SIO_000300: 1.424369e6

QD
type: SiteQuality
SIO_000300: 1.113e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.13e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 509
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1585
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 549
bin: 8.75e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7410
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10080
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.257822277847309e-5
allele num: 15980
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.427488e6

ClippingRankSum
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SIO_000300: -4.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.67e-1

QD
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SIO_000300: 1.307e1

BaseQRankSum
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SIO_000300: -3.547e0

FS
type: SiteQuality
SIO_000300: 2.398e0

VQSLOD
type: SiteQuality
SIO_000300: -5.014e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQ
type: SiteQuality
SIO_000300: 2.879e1

GenotypeQuality
all individuals: 885
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.682255568265931e-5
allele num: 59444
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.164415463437354e-4
allele num: 8588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15988
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.79e-1

QD
type: SiteQuality
SIO_000300: 1.003e1

FS
type: SiteQuality
SIO_000300: 5.564e0

MQRankSum
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SIO_000300: 1.83e-1

BaseQRankSum
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SIO_000300: 2.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.42e-1

DP
type: SiteQuality
SIO_000300: 1.428357e6

MQ
type: SiteQuality
SIO_000300: 3.04e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.33e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.347056264015798e-5
allele num: 59754
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: 1.67e0

MQ
type: SiteQuality
SIO_000300: 2.843e1

DP
type: SiteQuality
SIO_000300: 1.45406e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.52e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.233e0

QD
type: SiteQuality
SIO_000300: 1.025e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.67e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 12

GenotypeQuality
all individuals: 1593
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 12
allele frequency: 7.44047619047619e-4
allele num: 16128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59818
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.27e-1

DP
type: SiteQuality
SIO_000300: 1.460985e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.38e0

QD
type: SiteQuality
SIO_000300: 1.107e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.637e0

MQ
type: SiteQuality
SIO_000300: 2.871e1

FS
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.92e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1740
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60028
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.15473441108545e-4
allele num: 8660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.703e0

FS
type: SiteQuality
SIO_000300: 2.781e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

DP
type: SiteQuality
SIO_000300: 1.473002e6

QD
type: SiteQuality
SIO_000300: 8.369999999999999e0

BaseQRankSum
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SIO_000300: -1.379e0

MQRankSum
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SIO_000300: 2.19e0

VQSLOD
type: SiteQuality
SIO_000300: -7.743e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e0

MQ
type: SiteQuality
SIO_000300: 2.844e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10510
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.156119182467373e-5
allele num: 16244
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8684
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60228
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

East Asian
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allele count: 0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

BaseQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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MQRankSum
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FS
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ClippingRankSum
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MQ
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QD
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SIO_000300: 1.209e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.319061369444721e-5
allele num: 60258
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
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allele num: 8700
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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DP
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.052e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.310615989515072e-4
allele num: 7630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.659695943703114e-5
allele num: 60252
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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SIO_000300: -5.32e0

FS
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SIO_000300: 4.081e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-2

QD
type: SiteQuality
SIO_000300: 7.95e0

MQ
type: SiteQuality
SIO_000300: 2.794e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.996e0

DP
type: SiteQuality
SIO_000300: 1.494928e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.65e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7642
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60310
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.140243153628883e-5
allele num: 16286
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.386e1

InbreedingCoeff
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SIO_000300: -2.5e-3

MQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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DP
type: SiteQuality
SIO_000300: 1.496557e6

VQSLOD
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SIO_000300: -4.071e0

BaseQRankSum
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SIO_000300: 4.45e0

QD
type: SiteQuality
SIO_000300: 1.419e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.660853678790898e-5
allele num: 60210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7682
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.62e-1

DP
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SIO_000300: 1.500465e6

VQSLOD
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FS
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SIO_000300: 0.0e0

QD
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ReadPosRankSum
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SIO_000300: -5.34e-1

BaseQRankSum
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SIO_000300: -2.855e0

InbreedingCoeff
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SIO_000300: -4.5e-3

MQ
type: SiteQuality
SIO_000300: 2.668e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.65e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7666
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.15473441108545e-4
allele num: 8660
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60086
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.501615e6

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

ReadPosRankSum
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SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.4e-2

MQ
type: SiteQuality
SIO_000300: 2.75e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.664281196951037e-5
allele num: 60086
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.224439818782907e-4
allele num: 16334
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
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QD
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DP
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MQRankSum
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.4e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.602133749674733e-4
allele num: 7686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8692
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.323584153150758e-5
allele num: 60176
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 832
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QD
type: SiteQuality
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MQ
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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DP
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

Latino
type: Population
allele count: 5
allele frequency: 4.67814371257485e-4
allele num: 10688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

South Asian
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allele count: 19
allele frequency: 1.162506118453255e-3
allele num: 16344
num of homozygotes: 0

East Asian
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allele count: 3
allele frequency: 3.9032006245121e-4
allele num: 7686
num of homozygotes: 0

African
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allele count: 121
allele frequency: 1.406322640632264e-2
allele num: 8604
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European (Non-Finnish)
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allele count: 15
allele frequency: 2.498917135907773e-4
allele num: 60026
num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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DP
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QD
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ClippingRankSum
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.331889514543698e-5
allele num: 60026
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6424
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East Asian
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allele num: 7686
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Latino
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.93e-1

MQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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InbreedingCoeff
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FS
type: SiteQuality
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QD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10664
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7680
num of homozygotes: 0

South Asian
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allele count: 7
allele frequency: 4.282393246054081e-4
allele num: 16346
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.346048316937697e-5
allele num: 59772
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 6.0e-3

MQRankSum
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SIO_000300: 5.51e-1

ClippingRankSum
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SIO_000300: 1.72e-1

ReadPosRankSum
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SIO_000300: 2.85e-1

VQSLOD
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SIO_000300: -4.711e0

FS
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SIO_000300: 2.512e0

BaseQRankSum
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SIO_000300: -1.407e0

MQ
type: SiteQuality
SIO_000300: 2.814e1

QD
type: SiteQuality
SIO_000300: 8.27e0

DP
type: SiteQuality
SIO_000300: 1.497484e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.117704637220115e-5
allele num: 16346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7680
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59772
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.512e0

MQ
type: SiteQuality
SIO_000300: 2.814e1

DP
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VQSLOD
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BaseQRankSum
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SIO_000300: -1.407e0

MQRankSum
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SIO_000300: 5.51e-1

QD
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SIO_000300: 8.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 54
allele frequency: 6.296641791044776e-3
allele num: 8576
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59816
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.207729468599034e-3
allele num: 828
num of homozygotes: 0

European (Finnish)
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allele count: 3
allele frequency: 4.671441918405481e-4
allele num: 6422
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7682
num of homozygotes: 0

Latino
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allele count: 6
allele frequency: 5.620082427875609e-4
allele num: 10676
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -2.016e0

InbreedingCoeff
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QD
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VQSLOD
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MQRankSum
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FS
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SIO_000300: 5.649999999999999e-1

DP
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SIO_000300: 1.498304e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.57e-1

MQ
type: SiteQuality
SIO_000300: 2.751e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1101
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GenotypeQuality
all individuals: 541
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10670
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7680
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.674873547047198e-5
allele num: 59706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.038e1

DP
type: SiteQuality
SIO_000300: 1.49289e6

MQRankSum
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SIO_000300: -6.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 1.74e-1

MQ
type: SiteQuality
SIO_000300: 2.757e1

VQSLOD
type: SiteQuality
SIO_000300: -5.195e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1864
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10662
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.179523472517103e-4
allele num: 8478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59622
num of homozygotes: 0

South Asian
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allele count: 0
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allele num: 16350
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -4.1e-3

ClippingRankSum
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DP
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SIO_000300: 1.48857e6

MQ
type: SiteQuality
SIO_000300: 2.961e1

BaseQRankSum
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SIO_000300: 4.1e-2

FS
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SIO_000300: 8.305e0

QD
type: SiteQuality
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VQSLOD
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SIO_000300: -4.799e0

MQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.406469619018796e-5
allele num: 59478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10662
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: -4.3e-3

MQ
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BaseQRankSum
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DP
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QD
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VQSLOD
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ReadPosRankSum
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FS
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.685885764380605e-5
allele num: 59316
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.372071227741331e-5
allele num: 10670
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

South Asian
type: Population
allele count: 19
allele frequency: 1.161369193154034e-3
allele num: 16360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.133e0

MQ
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 938
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.910500544069641e-4
allele num: 58816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8206
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.609603340292275e-4
allele num: 7664
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.393199323689649e-5
allele num: 10646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.668827198238963e-4
allele num: 16354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.82e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

DP
type: SiteQuality
SIO_000300: 1.465702e6

VQSLOD
type: SiteQuality
SIO_000300: -3.961e0

QD
type: SiteQuality
SIO_000300: 1.141e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 595
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5461
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1871
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2013
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1339
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4287
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1093
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29475
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1805
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4098
bin: 9.75e1
variant carriers: 7

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58726
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.826767545003914e-4
allele num: 7666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10656
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.223690651003426e-4
allele num: 8172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.877e1

VQSLOD
type: SiteQuality
SIO_000300: -3.938e0

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

FS
type: SiteQuality
SIO_000300: 5.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-1

DP
type: SiteQuality
SIO_000300: 1.462908e6

QD
type: SiteQuality
SIO_000300: 1.057e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-1

GenotypeQuality
all individuals: 1523
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4331
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1314
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4092
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 297
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1871
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2006
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5504
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30166
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1096
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1798
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.223391240518718e-4
allele num: 8174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6348
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.262e0

DP
type: SiteQuality
SIO_000300: 1.462931e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.54e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.428e0

MQ
type: SiteQuality
SIO_000300: 2.784e1

FS
type: SiteQuality
SIO_000300: 3.834e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.446e0

GenotypeQuality
all individuals: 574
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1867
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4357
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1989
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5538
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1315
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1553
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1099
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1805
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30065
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4093
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8156
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.375585974123383e-5
allele num: 10666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16356
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.46263e6

MQ
type: SiteQuality
SIO_000300: 2.855e1

VQSLOD
type: SiteQuality
SIO_000300: -5.115e0

QD
type: SiteQuality
SIO_000300: 7.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.637e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.17e-1

GenotypeQuality
all individuals: 1853
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1725
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5456
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28805
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1831
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4095
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 734
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4291
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7664
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6320
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.707883590654461e-5
allele num: 58552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

VQSLOD
type: SiteQuality
SIO_000300: -5.993e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

MQ
type: SiteQuality
SIO_000300: 2.964e1

QD
type: SiteQuality
SIO_000300: 1.193e1

FS
type: SiteQuality
SIO_000300: 6.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.52e0

DP
type: SiteQuality
SIO_000300: 1.4555e6

GenotypeQuality
all individuals: 1878
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 765
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variant carriers: 0

GenotypeQuality
all individuals: 1542
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5443
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variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4345
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1849
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4095
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29189
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1844
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1743
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.235788433020267e-4
allele num: 8092
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.3e0

DP
type: SiteQuality
SIO_000300: 1.457471e6

FS
type: SiteQuality
SIO_000300: 6.117e0

VQSLOD
type: SiteQuality
SIO_000300: -6.294e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-1

MQ
type: SiteQuality
SIO_000300: 2.658e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.02e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.93e-1

GenotypeQuality
all individuals: 4280
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1651
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1221
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
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variant carriers: 0

GenotypeQuality
all individuals: 1799
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variant carriers: 0

GenotypeQuality
all individuals: 209
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GenotypeQuality
all individuals: 784
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variant carriers: 0

GenotypeQuality
all individuals: 322
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variant carriers: 0

GenotypeQuality
all individuals: 27685
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1900
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 735
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variant carriers: 0

GenotypeQuality
all individuals: 1464
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5480
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variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4097
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1865
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7680
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58560
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.380863039399625e-5
allele num: 10660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8092
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.454217e6

FS
type: SiteQuality
SIO_000300: 5.815e0

VQSLOD
type: SiteQuality
SIO_000300: -5.493e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

MQRankSum
type: SiteQuality
SIO_000300: -4.54e-1

QD
type: SiteQuality
SIO_000300: 6.31e0

MQ
type: SiteQuality
SIO_000300: 2.643e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.115e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

GenotypeQuality
all individuals: 4098
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1695
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variant carriers: 0

GenotypeQuality
all individuals: 1468
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variant carriers: 0

GenotypeQuality
all individuals: 1154
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1880
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GenotypeQuality
all individuals: 301
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GenotypeQuality
all individuals: 1114
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 841
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variant carriers: 0

GenotypeQuality
all individuals: 739
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variant carriers: 0

GenotypeQuality
all individuals: 27644
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variant carriers: 0

GenotypeQuality
all individuals: 1766
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variant carriers: 0

GenotypeQuality
all individuals: 4442
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 548
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variant carriers: 0

GenotypeQuality
all individuals: 1919
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variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5506
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1879
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8086
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.707825255319876e-5
allele num: 58554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6304
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.121e1

MQRankSum
type: SiteQuality
SIO_000300: -3.96e-1

MQ
type: SiteQuality
SIO_000300: 2.95e1

DP
type: SiteQuality
SIO_000300: 1.454789e6

VQSLOD
type: SiteQuality
SIO_000300: -5.436e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.61e-1

FS
type: SiteQuality
SIO_000300: 2.222e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.639e0

GenotypeQuality
all individuals: 4098
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1441
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1926
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.707708596605075e-5
allele num: 58558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8092
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7672
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

FS
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SIO_000300: 1.967e0

MQ
type: SiteQuality
SIO_000300: 2.799e1

QD
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SIO_000300: 9.35e0

ReadPosRankSum
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SIO_000300: 8.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.815e0

MQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.95e-1

DP
type: SiteQuality
SIO_000300: 1.454897e6

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2004
bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.299038711353598e-4
allele num: 7698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8094
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.496e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 1.457897e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

QD
type: SiteQuality
SIO_000300: 1.223e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

MQRankSum
type: SiteQuality
SIO_000300: 8.139999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.368e0

MQ
type: SiteQuality
SIO_000300: 2.961e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.47e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6308
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.235483073881888e-4
allele num: 8094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7698
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.47e-1

FS
type: SiteQuality
SIO_000300: 1.368e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

MQ
type: SiteQuality
SIO_000300: 2.961e1

DP
type: SiteQuality
SIO_000300: 1.457897e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

MQRankSum
type: SiteQuality
SIO_000300: 8.139999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.223e1

VQSLOD
type: SiteQuality
SIO_000300: -4.496e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

GenotypeQuality
all individuals: 4100
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 720
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variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.213592233009709e-3
allele num: 824
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10742
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8110
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59066
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.360000000000001e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

FS
type: SiteQuality
SIO_000300: 3.081e0

VQSLOD
type: SiteQuality
SIO_000300: -5.128e0

DP
type: SiteQuality
SIO_000300: 1.475061e6

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

MQ
type: SiteQuality
SIO_000300: 3.031e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8148
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.351992759695639e-5
allele num: 59666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10818
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.166e0

BaseQRankSum
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SIO_000300: -2.996e0

ReadPosRankSum
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SIO_000300: -6.35e-1

MQ
type: SiteQuality
SIO_000300: 2.819e1

FS
type: SiteQuality
SIO_000300: 1.602e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

DP
type: SiteQuality
SIO_000300: 1.495227e6

QD
type: SiteQuality
SIO_000300: 6.19e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8208
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6350
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10914
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.087168249330411e-5
allele num: 16428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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InbreedingCoeff
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QD
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -3.99e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.61e-1

MQ
type: SiteQuality
SIO_000300: 2.797e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 848
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8032
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11032
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61264
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.541989e6

ClippingRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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QD
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SIO_000300: 1.103e1

MQ
type: SiteQuality
SIO_000300: 2.997e1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -2.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

FS
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SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 9.049773755656108e-5
allele num: 11050
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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ClippingRankSum
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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DP
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BaseQRankSum
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MQ
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QD
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ReadPosRankSum
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SIO_000300: -1.85e-1

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.238543472875898e-4
allele num: 8074
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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allele frequency: 1.176470588235294e-3
allele num: 850
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQ
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BaseQRankSum
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QD
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MQRankSum
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 62064
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South Asian
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Other
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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DP
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FS
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QD
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MQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.611240010311936e-5
allele num: 62064
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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num of homozygotes: 0

Other
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MQRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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MQ
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FS
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QD
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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SIO_000300: 5.15e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 856
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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South Asian
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Latino
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European (Non-Finnish)
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num of homozygotes: 0

East Asian
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VQSLOD
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MQRankSum
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FS
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QD
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ReadPosRankSum
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BaseQRankSum
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DP
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MQ
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Latino
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European (Finnish)
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African
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Other
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European (Non-Finnish)
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allele frequency: 1.920860545524395e-4
allele num: 62472
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ClippingRankSum
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BaseQRankSum
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MQ
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MQRankSum
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QD
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FS
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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East Asian
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African
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European (Finnish)
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Other
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South Asian
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ReadPosRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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FS
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BaseQRankSum
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QD
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MQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11228
num of homozygotes: 0

East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 24
allele frequency: 3.828728224108225e-4
allele num: 62684
num of homozygotes: 0

Other
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allele num: 860
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South Asian
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allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
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DP
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SIO_000300: 1.578868e6

MQ
type: SiteQuality
SIO_000300: 2.865e1

FS
type: SiteQuality
SIO_000300: 1.404e0

QD
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MQRankSum
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SIO_000300: -1.53e-1

VQSLOD
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ClippingRankSum
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SIO_000300: -1.22e-1

InbreedingCoeff
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SIO_000300: 1.58e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.85e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 1.188212927756654e-4
allele num: 8416
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.777777777777778e-4
allele num: 11250
num of homozygotes: 0

European (Non-Finnish)
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allele count: 22
allele frequency: 3.500063637520682e-4
allele num: 62856
num of homozygotes: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

South Asian
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allele frequency: 6.067961165048543e-5
allele num: 16480
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ReadPosRankSum
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SIO_000300: 1.49e-1

ClippingRankSum
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SIO_000300: -2.07e-1

BaseQRankSum
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FS
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DP
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VQSLOD
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QD
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SIO_000300: 1.103e1

MQ
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SIO_000300: 2.867e1

MQRankSum
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SIO_000300: 6.900000000000001e-2

InbreedingCoeff
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SIO_000300: 5.3e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
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European (Non-Finnish)
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allele count: 4
allele frequency: 6.278843437038898e-5
allele num: 63706
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.897e0

MQRankSum
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SIO_000300: 9.0e-2

ReadPosRankSum
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SIO_000300: 1.12e0

ClippingRankSum
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QD
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SIO_000300: 1.057e1

DP
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MQ
type: SiteQuality
SIO_000300: 2.909e1

FS
type: SiteQuality
SIO_000300: 7.19e-1

VQSLOD
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SIO_000300: -4.576e0

InbreedingCoeff
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SIO_000300: -8.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.562841871659425e-5
allele num: 63986
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: -4.745e0

InbreedingCoeff
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ReadPosRankSum
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MQ
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SIO_000300: 3.058e1

MQRankSum
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SIO_000300: -1.2e-2

BaseQRankSum
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SIO_000300: -4.312e0

FS
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SIO_000300: 1.251e0

DP
type: SiteQuality
SIO_000300: 1.631894e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.62e-1

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 244

GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.744591765526867e-4
allele num: 11464
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 16
allele frequency: 2.449479485609308e-3
allele num: 6532
num of homozygotes: 0

European (Non-Finnish)
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allele count: 221
allele frequency: 3.445372910950362e-3
allele num: 64144
num of homozygotes: 0

African
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allele frequency: 5.744485294117647e-4
allele num: 8704
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Other
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allele frequency: 0.0e0
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InbreedingCoeff
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FS
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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QD
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MQ
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.55550024888004e-5
allele num: 64288
num of homozygotes: 0

QD
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SIO_000300: 1.176e1

BaseQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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VQSLOD
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FS
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ReadPosRankSum
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.554388037429664e-5
allele num: 64334
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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East Asian
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South Asian
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Latino
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num of homozygotes: 0

DP
type: SiteQuality
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ReadPosRankSum
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FS
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ClippingRankSum
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QD
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MQRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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