1-179077423-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077423
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077423
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2871G>A
  hgvsp: ENST00000408940.3:c.2871G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2934G>A
  hgvsp: ENST00000512653.1:c.2934G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2916G>A
  hgvsp: ENST00000367623.4:c.2916G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2670G>A
  hgvsp: ENST00000511413.1:c.2670G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2625G>A
  hgvsp: ENST00000344730.3:c.2625G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2562G>A
  hgvsp: ENST00000504405.1:c.2562G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2979G>A
  hgvsp: ENST00000502732.1:c.2979G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2607G>A
  hgvsp: ENST00000507173.1:c.2607G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4866
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10054
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1395
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6172
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10323
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1586
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu993Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-179077426-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077426
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077426
    reference: chr 1
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2622A>G
  hgvsp: ENST00000344730.3:c.2622A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2559A>G
  hgvsp: ENST00000504405.1:c.2559A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2667A>G
  hgvsp: ENST00000511413.1:c.2667A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2604A>G
  hgvsp: ENST00000507173.1:c.2604A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2868A>G
  hgvsp: ENST00000408940.3:c.2868A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2913A>G
  hgvsp: ENST00000367623.4:c.2913A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2931A>G
  hgvsp: ENST00000512653.1:c.2931A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2976A>G
  hgvsp: ENST00000502732.1:c.2976A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10053
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10324
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2553
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu992Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

1-179077430-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077430
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077430
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2555G>A
  hgvsp: ENSP00000426831.1:p.Arg852Lys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2618G>A
  hgvsp: ENSP00000339209.3:p.Arg873Lys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2909G>A
  hgvsp: ENSP00000356595.4:p.Arg970Lys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2663G>A
  hgvsp: ENSP00000424697.1:p.Arg888Lys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2927G>A
  hgvsp: ENSP00000423578.1:p.Arg976Lys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2864G>A
  hgvsp: ENSP00000386152.3:p.Arg955Lys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2972G>A
  hgvsp: ENSP00000427562.1:p.Arg991Lys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2600G>A
  hgvsp: ENSP00000423413.1:p.Arg867Lys
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17745
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10055
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3877
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10323
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6170
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg991Lys
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

1-179077437-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077437
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077437
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2920G>C
  hgvsp: ENSP00000423578.1:p.Val974Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2548G>C
  hgvsp: ENSP00000426831.1:p.Val850Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2902G>C
  hgvsp: ENSP00000356595.4:p.Val968Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2611G>C
  hgvsp: ENSP00000339209.3:p.Val871Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2593G>C
  hgvsp: ENSP00000423413.1:p.Val865Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2656G>C
  hgvsp: ENSP00000424697.1:p.Val886Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2857G>C
  hgvsp: ENSP00000386152.3:p.Val953Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2965G>C
  hgvsp: ENSP00000427562.1:p.Val989Leu
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10056
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2554
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val989Leu
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

1-179077438-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077438
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077438
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2964A>G
  hgvsp: ENST00000502732.1:c.2964A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2919A>G
  hgvsp: ENST00000512653.1:c.2919A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2610A>G
  hgvsp: ENST00000344730.3:c.2610A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2655A>G
  hgvsp: ENST00000511413.1:c.2655A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2856A>G
  hgvsp: ENST00000408940.3:c.2856A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2901A>G
  hgvsp: ENST00000367623.4:c.2901A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2547A>G
  hgvsp: ENST00000504405.1:c.2547A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2592A>G
  hgvsp: ENST00000507173.1:c.2592A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10055
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10325
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro988Pro
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

1-179077441-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077441
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077441
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2961A>C
  hgvsp: ENST00000502732.1:c.2961A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2589A>C
  hgvsp: ENST00000507173.1:c.2589A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2898A>C
  hgvsp: ENST00000367623.4:c.2898A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2607A>C
  hgvsp: ENST00000344730.3:c.2607A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2916A>C
  hgvsp: ENST00000512653.1:c.2916A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2652A>C
  hgvsp: ENST00000511413.1:c.2652A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2853A>C
  hgvsp: ENST00000408940.3:c.2853A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2544A>C
  hgvsp: ENST00000504405.1:c.2544A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10055
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3871
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro987Pro
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

1-179077444-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077444
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077444
    reference: chr 1
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2913A>G
  hgvsp: ENST00000512653.1:c.2913A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2604A>G
  hgvsp: ENST00000344730.3:c.2604A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2586A>G
  hgvsp: ENST00000507173.1:c.2586A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2541A>G
  hgvsp: ENST00000504405.1:c.2541A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2649A>G
  hgvsp: ENST00000511413.1:c.2649A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2958A>G
  hgvsp: ENST00000502732.1:c.2958A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2895A>G
  hgvsp: ENST00000367623.4:c.2895A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2850A>G
  hgvsp: ENST00000408940.3:c.2850A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10055
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10320
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro986Pro
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ

1-179077459-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077459
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077459
    reference: chr 1
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2880G>C
  hgvsp: ENSP00000356595.4:p.Lys960Asn
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2634G>C
  hgvsp: ENSP00000424697.1:p.Lys878Asn
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2526G>C
  hgvsp: ENSP00000426831.1:p.Lys842Asn
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2835G>C
  hgvsp: ENSP00000386152.3:p.Lys945Asn
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2943G>C
  hgvsp: ENSP00000427562.1:p.Lys981Asn
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2898G>C
  hgvsp: ENSP00000423578.1:p.Lys966Asn
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2571G>C
  hgvsp: ENSP00000423413.1:p.Lys857Asn
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2589G>C
  hgvsp: ENSP00000339209.3:p.Lys863Asn
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6173
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3864
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10318
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys981Asn
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

1-179077461-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077461
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077461
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2941A>G
  hgvsp: ENSP00000427562.1:p.Lys981Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2878A>G
  hgvsp: ENSP00000356595.4:p.Lys960Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2524A>G
  hgvsp: ENSP00000426831.1:p.Lys842Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2632A>G
  hgvsp: ENSP00000424697.1:p.Lys878Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2896A>G
  hgvsp: ENSP00000423578.1:p.Lys966Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2569A>G
  hgvsp: ENSP00000423413.1:p.Lys857Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2587A>G
  hgvsp: ENSP00000339209.3:p.Lys863Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2833A>G
  hgvsp: ENSP00000386152.3:p.Lys945Glu
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4858
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys981Glu
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

1-179077461-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077461
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077461
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2941A>C
  hgvsp: ENSP00000427562.1:p.Lys981Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2632A>C
  hgvsp: ENSP00000424697.1:p.Lys878Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2878A>C
  hgvsp: ENSP00000356595.4:p.Lys960Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2833A>C
  hgvsp: ENSP00000386152.3:p.Lys945Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2896A>C
  hgvsp: ENSP00000423578.1:p.Lys966Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2587A>C
  hgvsp: ENSP00000339209.3:p.Lys863Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2524A>C
  hgvsp: ENSP00000426831.1:p.Lys842Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2569A>C
  hgvsp: ENSP00000423413.1:p.Lys857Gln
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4858
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1395
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys981Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

1-179077468-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077468
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077468
    reference: chr 1
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2889A>G
  hgvsp: ENST00000512653.1:c.2889A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2517A>G
  hgvsp: ENST00000504405.1:c.2517A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2934A>G
  hgvsp: ENST00000502732.1:c.2934A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2625A>G
  hgvsp: ENST00000511413.1:c.2625A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2871A>G
  hgvsp: ENST00000367623.4:c.2871A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2580A>G
  hgvsp: ENST00000344730.3:c.2580A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2562A>G
  hgvsp: ENST00000507173.1:c.2562A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2826A>G
  hgvsp: ENST00000408940.3:c.2826A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17745
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6173
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3865
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30912
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val978Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

1-179077469-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077469
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077469
    reference: chr 1
allele count: 30
allele frequency: 2.470925443942938e-4
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2561T>A
  hgvsp: ENSP00000423413.1:p.Val854Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2933T>A
  hgvsp: ENSP00000427562.1:p.Val978Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2624T>A
  hgvsp: ENSP00000424697.1:p.Val875Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2825T>A
  hgvsp: ENSP00000386152.3:p.Val942Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2870T>A
  hgvsp: ENSP00000356595.4:p.Val957Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2888T>A
  hgvsp: ENSP00000423578.1:p.Val963Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2579T>A
  hgvsp: ENSP00000339209.3:p.Val860Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2516T>A
  hgvsp: ENSP00000426831.1:p.Val839Glu
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6196
  bin: 9.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 30890
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2555
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val978Glu
num of homozygotes: 1
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

1-179077472-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077472
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077472
    reference: chr 1
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2930G>A
  hgvsp: ENSP00000427562.1:p.Arg977Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2867G>A
  hgvsp: ENSP00000356595.4:p.Arg956Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2513G>A
  hgvsp: ENSP00000426831.1:p.Arg838Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2885G>A
  hgvsp: ENSP00000423578.1:p.Arg962Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2621G>A
  hgvsp: ENSP00000424697.1:p.Arg874Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2822G>A
  hgvsp: ENSP00000386152.3:p.Arg941Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2576G>A
  hgvsp: ENSP00000339209.3:p.Arg859Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2558G>A
  hgvsp: ENSP00000423413.1:p.Arg853Gln
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3869
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg977Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

1-179077473-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077473
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077473
    reference: chr 1
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2557C>T
  hgvsp: ENSP00000423413.1:p.Arg853Trp
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2575C>T
  hgvsp: ENSP00000339209.3:p.Arg859Trp
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2929C>T
  hgvsp: ENSP00000427562.1:p.Arg977Trp
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2512C>T
  hgvsp: ENSP00000426831.1:p.Arg838Trp
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2620C>T
  hgvsp: ENSP00000424697.1:p.Arg874Trp
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2866C>T
  hgvsp: ENSP00000356595.4:p.Arg956Trp
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2884C>T
  hgvsp: ENSP00000423578.1:p.Arg962Trp
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2821C>T
  hgvsp: ENSP00000386152.3:p.Arg941Trp
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30890
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg977Trp
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

1-179077478-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077478
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077478
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2861C>T
  hgvsp: ENSP00000356595.4:p.Pro954Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2924C>T
  hgvsp: ENSP00000427562.1:p.Pro975Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2816C>T
  hgvsp: ENSP00000386152.3:p.Pro939Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2615C>T
  hgvsp: ENSP00000424697.1:p.Pro872Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2507C>T
  hgvsp: ENSP00000426831.1:p.Pro836Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2879C>T
  hgvsp: ENSP00000423578.1:p.Pro960Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2570C>T
  hgvsp: ENSP00000339209.3:p.Pro857Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2552C>T
  hgvsp: ENSP00000423413.1:p.Pro851Leu
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1400
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro975Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

1-179077481-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077481
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077481
    reference: chr 1
allele count: 6
allele frequency: 4.941850887885876e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2813G>A
  hgvsp: ENSP00000386152.3:p.Arg938Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2504G>A
  hgvsp: ENSP00000426831.1:p.Arg835Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2567G>A
  hgvsp: ENSP00000339209.3:p.Arg856Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2921G>A
  hgvsp: ENSP00000427562.1:p.Arg974Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2858G>A
  hgvsp: ENSP00000356595.4:p.Arg953Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2612G>A
  hgvsp: ENSP00000424697.1:p.Arg871Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2876G>A
  hgvsp: ENSP00000423578.1:p.Arg959Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2549G>A
  hgvsp: ENSP00000423413.1:p.Arg850Gln
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17745
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3867
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3866
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg974Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

1-179077489-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077489
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077489
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2805C>A
  hgvsp: ENSP00000386152.3:p.Asp935Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2850C>A
  hgvsp: ENSP00000356595.4:p.Asp950Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2913C>A
  hgvsp: ENSP00000427562.1:p.Asp971Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2604C>A
  hgvsp: ENSP00000424697.1:p.Asp868Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2541C>A
  hgvsp: ENSP00000423413.1:p.Asp847Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2868C>A
  hgvsp: ENSP00000423578.1:p.Asp956Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2559C>A
  hgvsp: ENSP00000339209.3:p.Asp853Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2496C>A
  hgvsp: ENSP00000426831.1:p.Asp832Glu
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3867
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6167
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp971Glu
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

1-179077490-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077490
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077490
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2867A>T
  hgvsp: ENSP00000423578.1:p.Asp956Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2495A>T
  hgvsp: ENSP00000426831.1:p.Asp832Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2912A>T
  hgvsp: ENSP00000427562.1:p.Asp971Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2804A>T
  hgvsp: ENSP00000386152.3:p.Asp935Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2540A>T
  hgvsp: ENSP00000423413.1:p.Asp847Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2849A>T
  hgvsp: ENSP00000356595.4:p.Asp950Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2558A>T
  hgvsp: ENSP00000339209.3:p.Asp853Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2603A>T
  hgvsp: ENSP00000424697.1:p.Asp868Val
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp971Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

1-179077496-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077496
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077496
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2798C>G
  hgvsp: ENSP00000386152.3:p.Ser933Cys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2861C>G
  hgvsp: ENSP00000423578.1:p.Ser954Cys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2552C>G
  hgvsp: ENSP00000339209.3:p.Ser851Cys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2906C>G
  hgvsp: ENSP00000427562.1:p.Ser969Cys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2489C>G
  hgvsp: ENSP00000426831.1:p.Ser830Cys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2534C>G
  hgvsp: ENSP00000423413.1:p.Ser845Cys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2843C>G
  hgvsp: ENSP00000356595.4:p.Ser948Cys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2597C>G
  hgvsp: ENSP00000424697.1:p.Ser866Cys
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10321
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6166
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3868
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser969Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP

1-179077499-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077499
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077499
    reference: chr 1
allele count: 8
allele frequency: 6.589134517181169e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2858C>T
  hgvsp: ENSP00000423578.1:p.Ser953Phe
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2795C>T
  hgvsp: ENSP00000386152.3:p.Ser932Phe
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2840C>T
  hgvsp: ENSP00000356595.4:p.Ser947Phe
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2549C>T
  hgvsp: ENSP00000339209.3:p.Ser850Phe
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2594C>T
  hgvsp: ENSP00000424697.1:p.Ser865Phe
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2903C>T
  hgvsp: ENSP00000427562.1:p.Ser968Phe
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2531C>T
  hgvsp: ENSP00000423413.1:p.Ser844Phe
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2486C>T
  hgvsp: ENSP00000426831.1:p.Ser829Phe
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3868
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3866
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser968Phe
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

1-179077505-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077505
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077505
    reference: chr 1
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2480T>C
  hgvsp: ENSP00000426831.1:p.Val827Ala
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2525T>C
  hgvsp: ENSP00000423413.1:p.Val842Ala
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2588T>C
  hgvsp: ENSP00000424697.1:p.Val863Ala
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2834T>C
  hgvsp: ENSP00000356595.4:p.Val945Ala
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2789T>C
  hgvsp: ENSP00000386152.3:p.Val930Ala
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2897T>C
  hgvsp: ENSP00000427562.1:p.Val966Ala
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2543T>C
  hgvsp: ENSP00000339209.3:p.Val848Ala
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2852T>C
  hgvsp: ENSP00000423578.1:p.Val951Ala
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17737
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30929
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1581
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val966Ala
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-179077507-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077507
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077507
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2478G>A
  hgvsp: ENST00000504405.1:c.2478G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2523G>A
  hgvsp: ENST00000507173.1:c.2523G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2832G>A
  hgvsp: ENST00000367623.4:c.2832G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2541G>A
  hgvsp: ENST00000344730.3:c.2541G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2850G>A
  hgvsp: ENST00000512653.1:c.2850G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2787G>A
  hgvsp: ENST00000408940.3:c.2787G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2586G>A
  hgvsp: ENST00000511413.1:c.2586G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2895G>A
  hgvsp: ENST00000502732.1:c.2895G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln965Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

1-179077511-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077511
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077511
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2582A>C
  hgvsp: ENSP00000424697.1:p.His861Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2828A>C
  hgvsp: ENSP00000356595.4:p.His943Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2846A>C
  hgvsp: ENSP00000423578.1:p.His949Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2474A>C
  hgvsp: ENSP00000426831.1:p.His825Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2537A>C
  hgvsp: ENSP00000339209.3:p.His846Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2891A>C
  hgvsp: ENSP00000427562.1:p.His964Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2783A>C
  hgvsp: ENSP00000386152.3:p.His928Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2519A>C
  hgvsp: ENSP00000423413.1:p.His840Pro
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30930
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3868
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His964Pro
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

1-179077518-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077518
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077518
    reference: chr 1
allele count: 6
allele frequency: 4.941850887885876e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2467T>C
  hgvsp: ENSP00000426831.1:p.Ser823Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2776T>C
  hgvsp: ENSP00000386152.3:p.Ser926Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2821T>C
  hgvsp: ENSP00000356595.4:p.Ser941Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2839T>C
  hgvsp: ENSP00000423578.1:p.Ser947Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2530T>C
  hgvsp: ENSP00000339209.3:p.Ser844Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2512T>C
  hgvsp: ENSP00000423413.1:p.Ser838Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2575T>C
  hgvsp: ENSP00000424697.1:p.Ser859Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2884T>C
  hgvsp: ENSP00000427562.1:p.Ser962Pro
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3867
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30931
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser962Pro
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS

1-179077522-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077522
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077522
    reference: chr 1
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2526C>T
  hgvsp: ENST00000344730.3:c.2526C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2463C>T
  hgvsp: ENST00000504405.1:c.2463C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2571C>T
  hgvsp: ENST00000511413.1:c.2571C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2880C>T
  hgvsp: ENST00000502732.1:c.2880C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2835C>T
  hgvsp: ENST00000512653.1:c.2835C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2772C>T
  hgvsp: ENST00000408940.3:c.2772C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2817C>T
  hgvsp: ENST00000367623.4:c.2817C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2508C>T
  hgvsp: ENST00000507173.1:c.2508C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2548
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu960Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS

1-179077528-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077528
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077528
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2766C>T
  hgvsp: ENST00000408940.3:c.2766C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2502C>T
  hgvsp: ENST00000507173.1:c.2502C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2829C>T
  hgvsp: ENST00000512653.1:c.2829C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2565C>T
  hgvsp: ENST00000511413.1:c.2565C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2520C>T
  hgvsp: ENST00000344730.3:c.2520C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2811C>T
  hgvsp: ENST00000367623.4:c.2811C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2874C>T
  hgvsp: ENST00000502732.1:c.2874C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2457C>T
  hgvsp: ENST00000504405.1:c.2457C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2547
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Phe958Phe
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

1-179077529-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077529
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077529
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2828T>A
  hgvsp: ENSP00000423578.1:p.Phe943Tyr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2564T>A
  hgvsp: ENSP00000424697.1:p.Phe855Tyr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2810T>A
  hgvsp: ENSP00000356595.4:p.Phe937Tyr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2873T>A
  hgvsp: ENSP00000427562.1:p.Phe958Tyr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2519T>A
  hgvsp: ENSP00000339209.3:p.Phe840Tyr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2501T>A
  hgvsp: ENSP00000423413.1:p.Phe834Tyr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2456T>A
  hgvsp: ENSP00000426831.1:p.Phe819Tyr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2765T>A
  hgvsp: ENSP00000386152.3:p.Phe922Tyr
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3869
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30927
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1400
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Phe958Tyr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-179077532-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077532
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077532
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2561A>G
  hgvsp: ENSP00000424697.1:p.Lys854Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2825A>G
  hgvsp: ENSP00000423578.1:p.Lys942Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2807A>G
  hgvsp: ENSP00000356595.4:p.Lys936Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2516A>G
  hgvsp: ENSP00000339209.3:p.Lys839Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2453A>G
  hgvsp: ENSP00000426831.1:p.Lys818Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2498A>G
  hgvsp: ENSP00000423413.1:p.Lys833Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2870A>G
  hgvsp: ENSP00000427562.1:p.Lys957Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2762A>G
  hgvsp: ENSP00000386152.3:p.Lys921Arg
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3865
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1399
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10322
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys957Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

1-179077537-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077537
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077537
    reference: chr 1
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2865G>A
  hgvsp: ENST00000502732.1:c.2865G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2511G>A
  hgvsp: ENST00000344730.3:c.2511G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2802G>A
  hgvsp: ENST00000367623.4:c.2802G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2448G>A
  hgvsp: ENST00000504405.1:c.2448G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2556G>A
  hgvsp: ENST00000511413.1:c.2556G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2493G>A
  hgvsp: ENST00000507173.1:c.2493G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2757G>A
  hgvsp: ENST00000408940.3:c.2757G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2820G>A
  hgvsp: ENST00000512653.1:c.2820G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly955Gly
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

1-179077539-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077539
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077539
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2800G>C
  hgvsp: ENSP00000356595.4:p.Gly934Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2755G>C
  hgvsp: ENSP00000386152.3:p.Gly919Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2554G>C
  hgvsp: ENSP00000424697.1:p.Gly852Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2863G>C
  hgvsp: ENSP00000427562.1:p.Gly955Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2818G>C
  hgvsp: ENSP00000423578.1:p.Gly940Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2509G>C
  hgvsp: ENSP00000339209.3:p.Gly837Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2446G>C
  hgvsp: ENSP00000426831.1:p.Gly816Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2491G>C
  hgvsp: ENSP00000423413.1:p.Gly831Arg
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10317
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6167
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly955Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

1-179077539-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077539
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077537
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2861_2862delAG
  hgvsp: ENSP00000427562.1:p.Gln954ArgfsTer3
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2552_2553delAG
  hgvsp: ENSP00000424697.1:p.Gln851ArgfsTer3
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2444_2445delAG
  hgvsp: ENSP00000426831.1:p.Gln815ArgfsTer3
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2489_2490delAG
  hgvsp: ENSP00000423413.1:p.Gln830ArgfsTer3
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2798_2799delAG
  hgvsp: ENSP00000356595.4:p.Gln933ArgfsTer3
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2507_2508delAG
  hgvsp: ENSP00000339209.3:p.Gln836ArgfsTer3
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2816_2817delAG
  hgvsp: ENSP00000423578.1:p.Gln939ArgfsTer3
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2753_2754delAG
  hgvsp: ENSP00000386152.3:p.Gln918ArgfsTer3
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17742
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln954ArgfsTer3
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: CCT
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/1-179077553-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077553
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077553
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2741G>T
  hgvsp: ENSP00000386152.3:p.Gly914Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2495G>T
  hgvsp: ENSP00000339209.3:p.Gly832Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2849G>T
  hgvsp: ENSP00000427562.1:p.Gly950Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2804G>T
  hgvsp: ENSP00000423578.1:p.Gly935Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2540G>T
  hgvsp: ENSP00000424697.1:p.Gly847Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2786G>T
  hgvsp: ENSP00000356595.4:p.Gly929Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2432G>T
  hgvsp: ENSP00000426831.1:p.Gly811Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2477G>T
  hgvsp: ENSP00000423413.1:p.Gly826Val
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17745
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4866
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6166
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gly950Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum

1-179077556-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077556
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077556
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2492T>C
  hgvsp: ENSP00000339209.3:p.Ile831Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2537T>C
  hgvsp: ENSP00000424697.1:p.Ile846Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2846T>C
  hgvsp: ENSP00000427562.1:p.Ile949Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2474T>C
  hgvsp: ENSP00000423413.1:p.Ile825Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2783T>C
  hgvsp: ENSP00000356595.4:p.Ile928Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2429T>C
  hgvsp: ENSP00000426831.1:p.Ile810Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2738T>C
  hgvsp: ENSP00000386152.3:p.Ile913Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2801T>C
  hgvsp: ENSP00000423578.1:p.Ile934Thr
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7261
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10321
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1581
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3868
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile949Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

1-179077558-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077558
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077558
    reference: chr 1
allele count: 559
allele frequency: 4.604157743880341e-3
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2799C>T
  hgvsp: ENST00000512653.1:c.2799C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2736C>T
  hgvsp: ENST00000408940.3:c.2736C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2490C>T
  hgvsp: ENST00000344730.3:c.2490C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2844C>T
  hgvsp: ENST00000502732.1:c.2844C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2472C>T
  hgvsp: ENST00000507173.1:c.2472C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2535C>T
  hgvsp: ENST00000511413.1:c.2535C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2781C>T
  hgvsp: ENST00000367623.4:c.2781C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2427C>T
  hgvsp: ENST00000504405.1:c.2427C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 9982
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 239
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 4808
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 14682
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17643
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 5.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu948Leu
num of homozygotes: 16
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

1-179077559-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077559
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077559
    reference: chr 1
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2426T>C
  hgvsp: ENSP00000426831.1:p.Leu809Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2843T>C
  hgvsp: ENSP00000427562.1:p.Leu948Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2489T>C
  hgvsp: ENSP00000339209.3:p.Leu830Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2534T>C
  hgvsp: ENSP00000424697.1:p.Leu845Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2735T>C
  hgvsp: ENSP00000386152.3:p.Leu912Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2471T>C
  hgvsp: ENSP00000423413.1:p.Leu824Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2780T>C
  hgvsp: ENSP00000356595.4:p.Leu927Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2798T>C
  hgvsp: ENSP00000423578.1:p.Leu933Pro
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4836
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu948Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/1-179077564-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077564
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077564
    reference: chr 1
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2466G>T
  hgvsp: ENST00000507173.1:c.2466G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2730G>T
  hgvsp: ENST00000408940.3:c.2730G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2793G>T
  hgvsp: ENST00000512653.1:c.2793G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2484G>T
  hgvsp: ENST00000344730.3:c.2484G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2838G>T
  hgvsp: ENST00000502732.1:c.2838G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2775G>T
  hgvsp: ENST00000367623.4:c.2775G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2421G>T
  hgvsp: ENST00000504405.1:c.2421G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2529G>T
  hgvsp: ENST00000511413.1:c.2529G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10065
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17790
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3859
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val946Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

1-179077566-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077566
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077566
    reference: chr 1
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2791G>C
  hgvsp: ENSP00000423578.1:p.Val931Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2527G>C
  hgvsp: ENSP00000424697.1:p.Val843Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2773G>C
  hgvsp: ENSP00000356595.4:p.Val925Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2482G>C
  hgvsp: ENSP00000339209.3:p.Val828Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2728G>C
  hgvsp: ENSP00000386152.3:p.Val910Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2464G>C
  hgvsp: ENSP00000423413.1:p.Val822Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2419G>C
  hgvsp: ENSP00000426831.1:p.Val807Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2836G>C
  hgvsp: ENSP00000427562.1:p.Val946Leu
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31033
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val946Leu
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

1-179077566-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077566
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077566
    reference: chr 1
allele count: 78
allele frequency: 6.424406154251639e-4
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2482G>A
  hgvsp: ENSP00000339209.3:p.Val828Met
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2773G>A
  hgvsp: ENSP00000356595.4:p.Val925Met
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2728G>A
  hgvsp: ENSP00000386152.3:p.Val910Met
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2419G>A
  hgvsp: ENSP00000426831.1:p.Val807Met
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2836G>A
  hgvsp: ENSP00000427562.1:p.Val946Met
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2527G>A
  hgvsp: ENSP00000424697.1:p.Val843Met
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2464G>A
  hgvsp: ENSP00000423413.1:p.Val822Met
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2791G>A
  hgvsp: ENSP00000423578.1:p.Val931Met
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 14795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 10060
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3859
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val946Met
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

1-179077567-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077567
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077567
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2418C>T
  hgvsp: ENST00000504405.1:c.2418C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2772C>T
  hgvsp: ENST00000367623.4:c.2772C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2526C>T
  hgvsp: ENST00000511413.1:c.2526C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2481C>T
  hgvsp: ENST00000344730.3:c.2481C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2727C>T
  hgvsp: ENST00000408940.3:c.2727C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2463C>T
  hgvsp: ENST00000507173.1:c.2463C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2790C>T
  hgvsp: ENST00000512653.1:c.2790C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2835C>T
  hgvsp: ENST00000502732.1:c.2835C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31055
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3865
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp945Asp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

1-179077578-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077578
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077578
    reference: chr 1
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2470A>C
  hgvsp: ENSP00000339209.3:p.Thr824Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2824A>C
  hgvsp: ENSP00000427562.1:p.Thr942Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2452A>C
  hgvsp: ENSP00000423413.1:p.Thr818Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2407A>C
  hgvsp: ENSP00000426831.1:p.Thr803Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2761A>C
  hgvsp: ENSP00000356595.4:p.Thr921Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2515A>C
  hgvsp: ENSP00000424697.1:p.Thr839Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2779A>C
  hgvsp: ENSP00000423578.1:p.Thr927Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2716A>C
  hgvsp: ENSP00000386152.3:p.Thr906Pro
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10372
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1559
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr942Pro
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

1-179077581-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077581
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077581
    reference: chr 1
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2776C>G
  hgvsp: ENSP00000423578.1:p.His926Asp
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2404C>G
  hgvsp: ENSP00000426831.1:p.His802Asp
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2713C>G
  hgvsp: ENSP00000386152.3:p.His905Asp
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2512C>G
  hgvsp: ENSP00000424697.1:p.His838Asp
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2758C>G
  hgvsp: ENSP00000356595.4:p.His920Asp
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2467C>G
  hgvsp: ENSP00000339209.3:p.His823Asp
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2821C>G
  hgvsp: ENSP00000427562.1:p.His941Asp
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2449C>G
  hgvsp: ENSP00000423413.1:p.His817Asp
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10077
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7217
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3864
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
hgvs: p.His941Asp
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

1-179077586-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077586
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077586
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2771T>A
  hgvsp: ENSP00000423578.1:p.Leu924Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2708T>A
  hgvsp: ENSP00000386152.3:p.Leu903Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2507T>A
  hgvsp: ENSP00000424697.1:p.Leu836Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2816T>A
  hgvsp: ENSP00000427562.1:p.Leu939Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2399T>A
  hgvsp: ENSP00000426831.1:p.Leu800Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2444T>A
  hgvsp: ENSP00000423413.1:p.Leu815Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2462T>A
  hgvsp: ENSP00000339209.3:p.Leu821Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2753T>A
  hgvsp: ENSP00000356595.4:p.Leu918Gln
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17804
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10077
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3866
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu939Gln
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-179077590-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077590
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077590
    reference: chr 1
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2440A>C
  hgvsp: ENSP00000423413.1:p.Thr814Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2704A>C
  hgvsp: ENSP00000386152.3:p.Thr902Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2458A>C
  hgvsp: ENSP00000339209.3:p.Thr820Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2503A>C
  hgvsp: ENSP00000424697.1:p.Thr835Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2812A>C
  hgvsp: ENSP00000427562.1:p.Thr938Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2749A>C
  hgvsp: ENSP00000356595.4:p.Thr917Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2767A>C
  hgvsp: ENSP00000423578.1:p.Thr923Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2395A>C
  hgvsp: ENSP00000426831.1:p.Thr799Pro
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10077
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2530
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1383
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10369
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr938Pro
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

1-179077603-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077603
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077603
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2736C>T
  hgvsp: ENST00000367623.4:c.2736C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2445C>T
  hgvsp: ENST00000344730.3:c.2445C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2490C>T
  hgvsp: ENST00000511413.1:c.2490C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2754C>T
  hgvsp: ENST00000512653.1:c.2754C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2799C>T
  hgvsp: ENST00000502732.1:c.2799C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2691C>T
  hgvsp: ENST00000408940.3:c.2691C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2427C>T
  hgvsp: ENST00000507173.1:c.2427C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2382C>T
  hgvsp: ENST00000504405.1:c.2382C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10371
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val933Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

1-179077606-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077606
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077606
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2424A>G
  hgvsp: ENST00000507173.1:c.2424A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2487A>G
  hgvsp: ENST00000511413.1:c.2487A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2733A>G
  hgvsp: ENST00000367623.4:c.2733A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2688A>G
  hgvsp: ENST00000408940.3:c.2688A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2442A>G
  hgvsp: ENST00000344730.3:c.2442A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2796A>G
  hgvsp: ENST00000502732.1:c.2796A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2751A>G
  hgvsp: ENST00000512653.1:c.2751A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2379A>G
  hgvsp: ENST00000504405.1:c.2379A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14799
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31019
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro932Pro
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS

1-179077611-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077611
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077611
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2728G>C
  hgvsp: ENSP00000356595.4:p.Val910Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2482G>C
  hgvsp: ENSP00000424697.1:p.Val828Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2791G>C
  hgvsp: ENSP00000427562.1:p.Val931Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2746G>C
  hgvsp: ENSP00000423578.1:p.Val916Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2683G>C
  hgvsp: ENSP00000386152.3:p.Val895Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2437G>C
  hgvsp: ENSP00000339209.3:p.Val813Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2419G>C
  hgvsp: ENSP00000423413.1:p.Val807Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2374G>C
  hgvsp: ENSP00000426831.1:p.Val792Leu
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14798
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6030
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val931Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

1-179077613-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077613
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077613
    reference: chr 1
allele count: 1085
allele frequency: 8.93798602873336e-3
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2417A>G
  hgvsp: ENSP00000423413.1:p.Lys806Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2726A>G
  hgvsp: ENSP00000356595.4:p.Lys909Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2480A>G
  hgvsp: ENSP00000424697.1:p.Lys827Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2681A>G
  hgvsp: ENSP00000386152.3:p.Lys894Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2789A>G
  hgvsp: ENSP00000427562.1:p.Lys930Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2435A>G
  hgvsp: ENSP00000339209.3:p.Lys812Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2372A>G
  hgvsp: ENSP00000426831.1:p.Lys791Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2744A>G
  hgvsp: ENSP00000423578.1:p.Lys915Arg
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 14655
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9906
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 9.75e1
  variant carriers: 558
genotype depth: GenotypeDepth
  all individuals: 7073
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 17608
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 5.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1474
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys930Arg
num of homozygotes: 7
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP

1-179077617-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077617
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077617
    reference: chr 1
allele count: 3
allele frequency: 2.471495419495156e-5
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2677C>A
  hgvsp: ENSP00000386152.3:p.His893Asn
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2431C>A
  hgvsp: ENSP00000339209.3:p.His811Asn
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2722C>A
  hgvsp: ENSP00000356595.4:p.His908Asn
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2413C>A
  hgvsp: ENSP00000423413.1:p.His805Asn
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2368C>A
  hgvsp: ENSP00000426831.1:p.His790Asn
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2476C>A
  hgvsp: ENSP00000424697.1:p.His826Asn
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2740C>A
  hgvsp: ENSP00000423578.1:p.His914Asn
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2785C>A
  hgvsp: ENSP00000427562.1:p.His929Asn
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3872
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5816
  bin: 9.75e1
  variant carriers: 3
hgvs: p.His929Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

1-179077636-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077636
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077636
    reference: chr 1
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2349C>T
  hgvsp: ENST00000504405.1:c.2349C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2703C>T
  hgvsp: ENST00000367623.4:c.2703C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2721C>T
  hgvsp: ENST00000512653.1:c.2721C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2457C>T
  hgvsp: ENST00000511413.1:c.2457C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2412C>T
  hgvsp: ENST00000344730.3:c.2412C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2394C>T
  hgvsp: ENST00000507173.1:c.2394C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2766C>T
  hgvsp: ENST00000502732.1:c.2766C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2658C>T
  hgvsp: ENST00000408940.3:c.2658C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10093
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4757
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3816
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31178
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val922Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-179077638-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077638
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077638
    reference: chr 1
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2392G>A
  hgvsp: ENSP00000423413.1:p.Val798Ile
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2656G>A
  hgvsp: ENSP00000386152.3:p.Val886Ile
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2719G>A
  hgvsp: ENSP00000423578.1:p.Val907Ile
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2347G>A
  hgvsp: ENSP00000426831.1:p.Val783Ile
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2764G>A
  hgvsp: ENSP00000427562.1:p.Val922Ile
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2410G>A
  hgvsp: ENSP00000339209.3:p.Val804Ile
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2701G>A
  hgvsp: ENSP00000356595.4:p.Val901Ile
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2455G>A
  hgvsp: ENSP00000424697.1:p.Val819Ile
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4758
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10434
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5813
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Val922Ile
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD

1-179077639-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077639
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077639
    reference: chr 1
allele count: 4
allele frequency: 3.295653033648617e-5
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2391C>T
  hgvsp: ENST00000507173.1:c.2391C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2454C>T
  hgvsp: ENST00000511413.1:c.2454C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2700C>T
  hgvsp: ENST00000367623.4:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2655C>T
  hgvsp: ENST00000408940.3:c.2655C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2718C>T
  hgvsp: ENST00000512653.1:c.2718C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2346C>T
  hgvsp: ENST00000504405.1:c.2346C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2763C>T
  hgvsp: ENST00000502732.1:c.2763C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2409C>T
  hgvsp: ENST00000344730.3:c.2409C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3859
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31188
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5813
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro921Pro
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum

1-179077640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077640
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077640
    reference: chr 1
allele count: 2
allele frequency: 1.647853670594051e-5
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2699C>T
  hgvsp: ENSP00000356595.4:p.Pro900Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2408C>T
  hgvsp: ENSP00000339209.3:p.Pro803Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2345C>T
  hgvsp: ENSP00000426831.1:p.Pro782Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2390C>T
  hgvsp: ENSP00000423413.1:p.Pro797Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2717C>T
  hgvsp: ENSP00000423578.1:p.Pro906Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2762C>T
  hgvsp: ENSP00000427562.1:p.Pro921Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2453C>T
  hgvsp: ENSP00000424697.1:p.Pro818Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2654C>T
  hgvsp: ENSP00000386152.3:p.Pro885Leu
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10093
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4758
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17916
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31198
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro921Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/1-179077668-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077668
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077668
    reference: chr 1
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2626G>T
  hgvsp: ENSP00000386152.3:p.Gly876Cys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2317G>T
  hgvsp: ENSP00000426831.1:p.Gly773Cys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2671G>T
  hgvsp: ENSP00000356595.4:p.Gly891Cys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2425G>T
  hgvsp: ENSP00000424697.1:p.Gly809Cys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2689G>T
  hgvsp: ENSP00000423578.1:p.Gly897Cys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2380G>T
  hgvsp: ENSP00000339209.3:p.Gly794Cys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2362G>T
  hgvsp: ENSP00000423413.1:p.Gly788Cys
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2734G>T
  hgvsp: ENSP00000427562.1:p.Gly912Cys
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10384
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly912Cys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum

1-179077669-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077669
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077669
    reference: chr 1
allele count: 3
allele frequency: 2.473573984597879e-5
allele num: 121282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2625G>A
  hgvsp: ENST00000408940.3:c.2625G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2670G>A
  hgvsp: ENST00000367623.4:c.2670G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2316G>A
  hgvsp: ENST00000504405.1:c.2316G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2733G>A
  hgvsp: ENST00000502732.1:c.2733G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2379G>A
  hgvsp: ENST00000344730.3:c.2379G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2361G>A
  hgvsp: ENST00000507173.1:c.2361G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2424G>A
  hgvsp: ENST00000511413.1:c.2424G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2688G>A
  hgvsp: ENST00000512653.1:c.2688G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5812
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 10388
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro911Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

1-179077670-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077670
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077670
    reference: chr 1
allele count: 4
allele frequency: 3.297717979158422e-5
allele num: 121296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2315C>T
  hgvsp: ENSP00000426831.1:p.Pro772Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2687C>T
  hgvsp: ENSP00000423578.1:p.Pro896Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2423C>T
  hgvsp: ENSP00000424697.1:p.Pro808Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2360C>T
  hgvsp: ENSP00000423413.1:p.Pro787Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2378C>T
  hgvsp: ENSP00000339209.3:p.Pro793Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2669C>T
  hgvsp: ENSP00000356595.4:p.Pro890Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2624C>T
  hgvsp: ENSP00000386152.3:p.Pro875Leu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2732C>T
  hgvsp: ENSP00000427562.1:p.Pro911Leu
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10074
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17830
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3842
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro911Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

1-179077670-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077670
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077670
    reference: chr 1
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2624C>G
  hgvsp: ENSP00000386152.3:p.Pro875Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2423C>G
  hgvsp: ENSP00000424697.1:p.Pro808Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2378C>G
  hgvsp: ENSP00000339209.3:p.Pro793Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2732C>G
  hgvsp: ENSP00000427562.1:p.Pro911Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2687C>G
  hgvsp: ENSP00000423578.1:p.Pro896Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2669C>G
  hgvsp: ENSP00000356595.4:p.Pro890Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2360C>G
  hgvsp: ENSP00000423413.1:p.Pro787Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2315C>G
  hgvsp: ENSP00000426831.1:p.Pro772Arg
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17830
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10395
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro911Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

1-179077674-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077674
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077674
    reference: chr 1
allele count: 1
allele frequency: 8.244430886935875e-6
allele num: 121294
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2356C>T
  hgvsp: ENSP00000423413.1:p.Gln786Ter
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2374C>T
  hgvsp: ENSP00000339209.3:p.Gln792Ter
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2311C>T
  hgvsp: ENSP00000426831.1:p.Gln771Ter
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2665C>T
  hgvsp: ENSP00000356595.4:p.Gln889Ter
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2419C>T
  hgvsp: ENSP00000424697.1:p.Gln807Ter
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2683C>T
  hgvsp: ENSP00000423578.1:p.Gln895Ter
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2620C>T
  hgvsp: ENSP00000386152.3:p.Gln874Ter
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2728C>T
  hgvsp: ENSP00000427562.1:p.Gln910Ter
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2479
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1500
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln910Ter
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

1-179077680-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077680
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077680
    reference: chr 1
allele count: 3
allele frequency: 2.473737157181259e-5
allele num: 121274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2659G>A
  hgvsp: ENSP00000356595.4:p.Gly887Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2614G>A
  hgvsp: ENSP00000386152.3:p.Gly872Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2350G>A
  hgvsp: ENSP00000423413.1:p.Gly784Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2722G>A
  hgvsp: ENSP00000427562.1:p.Gly908Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2677G>A
  hgvsp: ENSP00000423578.1:p.Gly893Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2368G>A
  hgvsp: ENSP00000339209.3:p.Gly790Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2305G>A
  hgvsp: ENSP00000426831.1:p.Gly769Arg
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2413G>A
  hgvsp: ENSP00000424697.1:p.Gly805Arg
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14740
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10087
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3852
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly908Arg
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

1-179077689-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077689
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077689
    reference: chr 1
allele count: 17
allele frequency: 1.402084982845078e-4
allele num: 121248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2404C>A
  hgvsp: ENSP00000424697.1:p.Pro802Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2605C>A
  hgvsp: ENSP00000386152.3:p.Pro869Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2296C>A
  hgvsp: ENSP00000426831.1:p.Pro766Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2359C>A
  hgvsp: ENSP00000339209.3:p.Pro787Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2650C>A
  hgvsp: ENSP00000356595.4:p.Pro884Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2341C>A
  hgvsp: ENSP00000423413.1:p.Pro781Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2668C>A
  hgvsp: ENSP00000423578.1:p.Pro890Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2713C>A
  hgvsp: ENSP00000427562.1:p.Pro905Thr
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10078
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7004
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14687
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17815
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10429
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro905Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP

1-179077694-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077694
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077694
    reference: chr 1
allele count: 1
allele frequency: 8.250280509537325e-6
allele num: 121208
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2645G>C
  hgvsp: ENSP00000356595.4:p.Gly882Ala
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2354G>C
  hgvsp: ENSP00000339209.3:p.Gly785Ala
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2600G>C
  hgvsp: ENSP00000386152.3:p.Gly867Ala
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2399G>C
  hgvsp: ENSP00000424697.1:p.Gly800Ala
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2291G>C
  hgvsp: ENSP00000426831.1:p.Gly764Ala
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2663G>C
  hgvsp: ENSP00000423578.1:p.Gly888Ala
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2708G>C
  hgvsp: ENSP00000427562.1:p.Gly903Ala
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2336G>C
  hgvsp: ENSP00000423413.1:p.Gly779Ala
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2476
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30666
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly903Ala
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

1-179077694-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077694
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077694
    reference: chr 1
allele count: 2
allele frequency: 1.650056101907465e-5
allele num: 121208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2399G>A
  hgvsp: ENSP00000424697.1:p.Gly800Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2336G>A
  hgvsp: ENSP00000423413.1:p.Gly779Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2600G>A
  hgvsp: ENSP00000386152.3:p.Gly867Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2645G>A
  hgvsp: ENSP00000356595.4:p.Gly882Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2663G>A
  hgvsp: ENSP00000423578.1:p.Gly888Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2291G>A
  hgvsp: ENSP00000426831.1:p.Gly764Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2354G>A
  hgvsp: ENSP00000339209.3:p.Gly785Glu
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2708G>A
  hgvsp: ENSP00000427562.1:p.Gly903Glu
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14648
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2476
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly903Glu
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP

1-179077697-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077697
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077697
    reference: chr 1
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2333C>G
  hgvsp: ENSP00000423413.1:p.Ala778Gly
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2351C>G
  hgvsp: ENSP00000339209.3:p.Ala784Gly
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2660C>G
  hgvsp: ENSP00000423578.1:p.Ala887Gly
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2642C>G
  hgvsp: ENSP00000356595.4:p.Ala881Gly
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2705C>G
  hgvsp: ENSP00000427562.1:p.Ala902Gly
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2396C>G
  hgvsp: ENSP00000424697.1:p.Ala799Gly
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2597C>G
  hgvsp: ENSP00000386152.3:p.Ala866Gly
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2288C>G
  hgvsp: ENSP00000426831.1:p.Ala763Gly
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6855
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2480
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala902Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

1-179077709-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077709
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077709
    reference: chr 1
allele count: 4
allele frequency: 3.303273544082185e-5
allele num: 121092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2384G>A
  hgvsp: ENSP00000424697.1:p.Arg795Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2693G>A
  hgvsp: ENSP00000427562.1:p.Arg898Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2630G>A
  hgvsp: ENSP00000356595.4:p.Arg877Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2339G>A
  hgvsp: ENSP00000339209.3:p.Arg780Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2321G>A
  hgvsp: ENSP00000423413.1:p.Arg774Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2276G>A
  hgvsp: ENSP00000426831.1:p.Arg759Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2648G>A
  hgvsp: ENSP00000423578.1:p.Arg883Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2585G>A
  hgvsp: ENSP00000386152.3:p.Arg862Gln
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17754
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10061
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10323
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1505
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg898Gln
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD

1-179077712-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077712
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077712
    reference: chr 1
allele count: 1
allele frequency: 8.269246671628215e-6
allele num: 120930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2381C>T
  hgvsp: ENSP00000424697.1:p.Ala794Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2645C>T
  hgvsp: ENSP00000423578.1:p.Ala882Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2627C>T
  hgvsp: ENSP00000356595.4:p.Ala876Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2336C>T
  hgvsp: ENSP00000339209.3:p.Ala779Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2690C>T
  hgvsp: ENSP00000427562.1:p.Ala897Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2582C>T
  hgvsp: ENSP00000386152.3:p.Ala861Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2318C>T
  hgvsp: ENSP00000423413.1:p.Ala773Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2273C>T
  hgvsp: ENSP00000426831.1:p.Ala758Val
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala897Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/1-179077732-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077732
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077732
    reference: chr 1
allele count: 101
allele frequency: 9.015925158894522e-4
allele num: 112024
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2625T>G
  hgvsp: ENST00000512653.1:c.2625T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2316T>G
  hgvsp: ENST00000344730.3:c.2316T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2607T>G
  hgvsp: ENST00000367623.4:c.2607T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2361T>G
  hgvsp: ENST00000511413.1:c.2361T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2298T>G
  hgvsp: ENST00000507173.1:c.2298T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2670T>G
  hgvsp: ENST00000502732.1:c.2670T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2562T>G
  hgvsp: ENST00000408940.3:c.2562T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2253T>G
  hgvsp: ENST00000504405.1:c.2253T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4637
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 12655
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9412
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 16478
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 5.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 1.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 3249
  bin: 9.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 1243
  bin: 3.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 7.5e0
  variant carriers: 5
hgvs: p.Gly890Gly
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

1-179077737-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077737
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077737
    reference: chr 1
allele count: 37
allele frequency: 3.247323152536422e-4
allele num: 113940
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2620A>C
  hgvsp: ENSP00000423578.1:p.Lys874Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2293A>C
  hgvsp: ENSP00000423413.1:p.Lys765Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2356A>C
  hgvsp: ENSP00000424697.1:p.Lys786Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2602A>C
  hgvsp: ENSP00000356595.4:p.Lys868Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2248A>C
  hgvsp: ENSP00000426831.1:p.Lys750Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2665A>C
  hgvsp: ENSP00000427562.1:p.Lys889Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2311A>C
  hgvsp: ENSP00000339209.3:p.Lys771Gln
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2557A>C
  hgvsp: ENSP00000386152.3:p.Lys853Gln
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4325
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17776
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13633
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9571
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2904
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 5.25e1
  variant carriers: 3
hgvs: p.Lys889Gln
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

1-179077738-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077738
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077738
    reference: chr 1
allele count: 1
allele frequency: 8.435828651448432e-6
allele num: 118542
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2310C>A
  hgvsp: ENST00000344730.3:c.2310C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2601C>A
  hgvsp: ENST00000367623.4:c.2601C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2247C>A
  hgvsp: ENST00000504405.1:c.2247C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2664C>A
  hgvsp: ENST00000502732.1:c.2664C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2355C>A
  hgvsp: ENST00000511413.1:c.2355C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2292C>A
  hgvsp: ENST00000507173.1:c.2292C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2556C>A
  hgvsp: ENST00000408940.3:c.2556C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2619C>A
  hgvsp: ENST00000512653.1:c.2619C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3820
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32368
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3359
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro888Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

1-179077746-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077746
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077746
    reference: chr 1
allele count: 2
allele frequency: 1.657852417977751e-5
allele num: 120638
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2548G>C
  hgvsp: ENSP00000386152.3:p.Ala850Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2284G>C
  hgvsp: ENSP00000423413.1:p.Ala762Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2239G>C
  hgvsp: ENSP00000426831.1:p.Ala747Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2593G>C
  hgvsp: ENSP00000356595.4:p.Ala865Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2302G>C
  hgvsp: ENSP00000339209.3:p.Ala768Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2656G>C
  hgvsp: ENSP00000427562.1:p.Ala886Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2347G>C
  hgvsp: ENSP00000424697.1:p.Ala783Pro
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2611G>C
  hgvsp: ENSP00000423578.1:p.Ala871Pro
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34409
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala886Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-179077746-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077746
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077746
    reference: chr 1
allele count: 1
allele frequency: 8.289262089888757e-6
allele num: 120638
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2239G>A
  hgvsp: ENSP00000426831.1:p.Ala747Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2347G>A
  hgvsp: ENSP00000424697.1:p.Ala783Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2302G>A
  hgvsp: ENSP00000339209.3:p.Ala768Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2656G>A
  hgvsp: ENSP00000427562.1:p.Ala886Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2593G>A
  hgvsp: ENSP00000356595.4:p.Ala865Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2611G>A
  hgvsp: ENSP00000423578.1:p.Ala871Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2548G>A
  hgvsp: ENSP00000386152.3:p.Ala850Thr
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2284G>A
  hgvsp: ENSP00000423413.1:p.Ala762Thr
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11572
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1568
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala886Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

1-179077753-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077753
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077753
    reference: chr 1
allele count: 15
allele frequency: 1.351327003117061e-4
allele num: 111002
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2295A>G
  hgvsp: ENST00000344730.3:c.2295A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2586A>G
  hgvsp: ENST00000367623.4:c.2586A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2232A>G
  hgvsp: ENST00000504405.1:c.2232A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2649A>G
  hgvsp: ENST00000502732.1:c.2649A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2541A>G
  hgvsp: ENST00000408940.3:c.2541A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2604A>G
  hgvsp: ENST00000512653.1:c.2604A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2277A>G
  hgvsp: ENST00000507173.1:c.2277A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2340A>G
  hgvsp: ENST00000511413.1:c.2340A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15476
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20150
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9737
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly883Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-179077754-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179077754
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 179077754
    reference: chr 1
allele count: 3
allele frequency: 2.483978339708878e-5
allele num: 120774
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000339209
  ensembl transcript: ENST00000344730
  gene symbol: ABL2
  hgvsc: ENST00000344730.3:c.2294G>T
  hgvsp: ENSP00000339209.3:p.Gly765Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423413
  ensembl transcript: ENST00000507173
  gene symbol: ABL2
  hgvsc: ENST00000507173.1:c.2276G>T
  hgvsp: ENSP00000423413.1:p.Gly759Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000424697
  ensembl transcript: ENST00000511413
  gene symbol: ABL2
  hgvsc: ENST00000511413.1:c.2339G>T
  hgvsp: ENSP00000424697.1:p.Gly780Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000356595
  ensembl transcript: ENST00000367623
  gene symbol: ABL2
  hgvsc: ENST00000367623.4:c.2585G>T
  hgvsp: ENSP00000356595.4:p.Gly862Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000423578
  ensembl transcript: ENST00000512653
  gene symbol: ABL2
  hgvsc: ENST00000512653.1:c.2603G>T
  hgvsp: ENSP00000423578.1:p.Gly868Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000427562
  ensembl transcript: ENST00000502732
  gene symbol: ABL2
  hgvsc: ENST00000502732.1:c.2648G>T
  hgvsp: ENSP00000427562.1:p.Gly883Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000426831
  ensembl transcript: ENST00000504405
  gene symbol: ABL2
  hgvsc: ENST00000504405.1:c.2231G>T
  hgvsp: ENSP00000426831.1:p.Gly744Val
  variant of: http://identifiers.org/hgnc/77
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000143322
  ensembl protein: ENSP00000386152
  ensembl transcript: ENST00000408940
  gene symbol: ABL2
  hgvsc: ENST00000408940.3:c.2540G>T
  hgvsp: ENSP00000386152.3:p.Gly847Val
  variant of: http://identifiers.org/hgnc/77
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10170
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Gly883Val
num of homozygotes: 1
reference allele: C

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30894
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3876
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2554
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3876
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.296e0

DP
type: SiteQuality
SIO_000300: 2.033385e6

VQSLOD
type: SiteQuality
SIO_000300: -1.047e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.242e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.338e0

GenotypeQuality
all individuals: 3875
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30896
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3876
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6173
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.993407252022775e-5
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.033627e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

MQRankSum
type: SiteQuality
SIO_000300: -2.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.346e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e-1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30907
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3874
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2555
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.54e0

QD
type: SiteQuality
SIO_000300: 1.447e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.033314e6

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.47e-1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6171
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3876
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3872
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30905
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10324
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

InbreedingCoeff
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VQSLOD
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BaseQRankSum
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SIO_000300: 2.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.95e-1

FS
type: SiteQuality
SIO_000300: 2.969e0

QD
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SIO_000300: 1.515e1

MQRankSum
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SIO_000300: -8.45e-1

ClippingRankSum
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SIO_000300: -3.8e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

DP
type: SiteQuality
SIO_000300: 2.033458e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.851e1

QD
type: SiteQuality
SIO_000300: 1.361e1

ClippingRankSum
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SIO_000300: -9.0e-1

FS
type: SiteQuality
SIO_000300: 8.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.13e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
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SIO_000300: -1.441e0

DP
type: SiteQuality
SIO_000300: 2.033391e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.59e-1

FS
type: SiteQuality
SIO_000300: 1.058e0

VQSLOD
type: SiteQuality
SIO_000300: 9.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.033428e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.99e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-1

QD
type: SiteQuality
SIO_000300: 8.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.982e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.42e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.43e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.156e1

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66740
num of homozygotes: 0

Other
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VQSLOD
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MQ
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DP
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FS
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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European (Non-Finnish)
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allele num: 66740
num of homozygotes: 0

East Asian
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Other
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
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VQSLOD
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MQ
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InbreedingCoeff
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ClippingRankSum
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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FS
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ClippingRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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MQ
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VQSLOD
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QD
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

East Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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allele frequency: 1.816860465116279e-3
allele num: 16512
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QD
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MQ
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FS
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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South Asian
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European (Non-Finnish)
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Latino
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Other
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ClippingRankSum
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MQ
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DP
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InbreedingCoeff
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FS
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QD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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East Asian
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FS
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VQSLOD
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InbreedingCoeff
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QD
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ClippingRankSum
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MQ
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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Other
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South Asian
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African
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East Asian
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European (Non-Finnish)
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQRankSum
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FS
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MQ
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QD
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Other
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Latino
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African
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European (Finnish)
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European (Non-Finnish)
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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MQ
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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South Asian
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East Asian
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Other
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European (Non-Finnish)
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
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DP
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ClippingRankSum
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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African
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East Asian
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South Asian
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Latino
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ReadPosRankSum
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VQSLOD
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QD
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FS
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DP
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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South Asian
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Other
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Latino
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African
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European (Finnish)
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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QD
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InbreedingCoeff
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BaseQRankSum
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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South Asian
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European (Finnish)
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Latino
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East Asian
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DP
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MQ
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ClippingRankSum
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QD
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FS
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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DP
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VQSLOD
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FS
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MQRankSum
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MQ
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ReadPosRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

African
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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InbreedingCoeff
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MQRankSum
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FS
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QD
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MQ
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

South Asian
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QD
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FS
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BaseQRankSum
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InbreedingCoeff
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DP
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 8.990110878034162e-5
allele num: 66740
num of homozygotes: 0

South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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Other
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QD
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MQ
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InbreedingCoeff
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MQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 4.495055439017081e-5
allele num: 66740
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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QD
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DP
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ClippingRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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MQRankSum
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VQSLOD
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FS
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

Latino
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South Asian
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East Asian
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African
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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MQ
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ClippingRankSum
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BaseQRankSum
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FS
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DP
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

East Asian
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Other
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Latino
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African
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ReadPosRankSum
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FS
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DP
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BaseQRankSum
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QD
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MQ
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Latino
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South Asian
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European (Finnish)
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East Asian
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Other
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VQSLOD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Non-Finnish)
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European (Finnish)
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East Asian
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South Asian
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African
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QD
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DP
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Other
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African
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European (Finnish)
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European (Non-Finnish)
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Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

FS
type: SiteQuality
SIO_000300: 6.224e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.14e0

DP
type: SiteQuality
SIO_000300: 2.033869e6

QD
type: SiteQuality
SIO_000300: 1.203e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.46e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3868
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2549
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

MQRankSum
type: SiteQuality
SIO_000300: 3.46e-1

DP
type: SiteQuality
SIO_000300: 2.033869e6

FS
type: SiteQuality
SIO_000300: 6.224e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.22e-1

QD
type: SiteQuality
SIO_000300: 1.203e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.174e0

MQRankSum
type: SiteQuality
SIO_000300: 4.74e-1

QD
type: SiteQuality
SIO_000300: 2.744e1

MQ
type: SiteQuality
SIO_000300: 5.944e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.271e0

DP
type: SiteQuality
SIO_000300: 2.0339e6

FS
type: SiteQuality
SIO_000300: 1.943e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.422e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.373e0

VQSLOD
type: SiteQuality
SIO_000300: -2.904e0

QD
type: SiteQuality
SIO_000300: 6.42e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.794e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

MQRankSum
type: SiteQuality
SIO_000300: -1.158e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e0

DP
type: SiteQuality
SIO_000300: 2.033757e6

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 543

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3835
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GenotypeQuality
all individuals: 1553
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variant carriers: 0

African
type: Population
allele count: 494
allele frequency: 4.747261195464155e-2
allele num: 10406
num of homozygotes: 15

Latino
type: Population
allele count: 41
allele frequency: 3.541198825358438e-3
allele num: 11578
num of homozygotes: 1

South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.547198082109679e-4
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.405286343612335e-3
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.45e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.408e1

MQRankSum
type: SiteQuality
SIO_000300: 4.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.42e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

VQSLOD
type: SiteQuality
SIO_000300: 5.8e0

DP
type: SiteQuality
SIO_000300: 2.06457e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.519e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-2

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10358
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.033415e6

FS
type: SiteQuality
SIO_000300: 3.148e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

VQSLOD
type: SiteQuality
SIO_000300: 8.67e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

QD
type: SiteQuality
SIO_000300: 1.468e1

GenotypeQuality
all individuals: 6064
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variant carriers: 4

GenotypeQuality
all individuals: 7
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 1383
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.993407252022775e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.837e0

FS
type: SiteQuality
SIO_000300: 3.247e0

DP
type: SiteQuality
SIO_000300: 2.033679e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.58e-1

QD
type: SiteQuality
SIO_000300: 1.143e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.038566e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

VQSLOD
type: SiteQuality
SIO_000300: 6.71e0

QD
type: SiteQuality
SIO_000300: 1.368e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 78

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 31033
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GenotypeQuality
all individuals: 10355
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 71
allele frequency: 6.822986738420142e-3
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.182242183451373e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 6.71e0

QD
type: SiteQuality
SIO_000300: 1.368e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1383
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10370
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GenotypeQuality
all individuals: 1559
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.415e0

ReadPosRankSum
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SIO_000300: 2.18e-1

MQ
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SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.431e0

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.977e1

ClippingRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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QD
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

BaseQRankSum
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SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: 1.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.399999999999999e-1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.028e0

MQ
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SIO_000300: 5.934e1

ReadPosRankSum
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DP
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SIO_000300: 2.032682e6

InbreedingCoeff
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.032767e6

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.34e0

ClippingRankSum
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SIO_000300: -2.817e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.346e1

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.54e-1

BaseQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.91e-1

DP
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: 1.74e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.7e-1

ReadPosRankSum
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.901e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e-1

DP
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SIO_000300: 2.032568e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
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SIO_000300: 2.04e0

DP
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QD
type: SiteQuality
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BaseQRankSum
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MQ
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SIO_000300: 5.89e1

InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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SIO_000300: 7.74e-1

VQSLOD
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FS
type: SiteQuality
SIO_000300: 4.998e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

South Asian
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East Asian
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QD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.922e1

BaseQRankSum
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
type: SiteQuality
SIO_000300: -8.72e-1

VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3819
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variant carriers: 0

Latino
type: Population
allele count: 100
allele frequency: 8.638562543192813e-3
allele num: 11576
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 12
allele frequency: 1.814333232537043e-3
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 89
allele frequency: 5.390019379844961e-3
allele num: 16512
num of homozygotes: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
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allele count: 34
allele frequency: 3.26734576206035e-3
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 840
allele frequency: 1.258955067294146e-2
allele num: 66722
num of homozygotes: 4

Other
type: Population
allele count: 9
allele frequency: 9.911894273127754e-3
allele num: 908
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: 9.599999999999999e-3

FS
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BaseQRankSum
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SIO_000300: 3.54e0

DP
type: SiteQuality
SIO_000300: 2.098476e6

GenotypeQuality
all individuals: 2493
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496942079386017e-5
allele num: 66712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

VQSLOD
type: SiteQuality
SIO_000300: 7.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.27e-1

FS
type: SiteQuality
SIO_000300: 5.586e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.031799e6

QD
type: SiteQuality
SIO_000300: 1.352e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3863
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GenotypeQuality
all individuals: 5813
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.362e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 4.481e0

DP
type: SiteQuality
SIO_000300: 2.030947e6

QD
type: SiteQuality
SIO_000300: 1.753e1

VQSLOD
type: SiteQuality
SIO_000300: -1.973e0

MQ
type: SiteQuality
SIO_000300: 5.834e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.245e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.88e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1501
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GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.14e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.33e-1

DP
type: SiteQuality
SIO_000300: 2.030855e6

VQSLOD
type: SiteQuality
SIO_000300: -1.61e0

FS
type: SiteQuality
SIO_000300: 1.1576e1

MQ
type: SiteQuality
SIO_000300: 5.903e1

QD
type: SiteQuality
SIO_000300: 1.118e1

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3817
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variant carriers: 0

GenotypeQuality
all individuals: 2488
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.497751124437781e-5
allele num: 66700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.98e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

QD
type: SiteQuality
SIO_000300: 1.435e1

VQSLOD
type: SiteQuality
SIO_000300: 6.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 7.49e-1

FS
type: SiteQuality
SIO_000300: 3.208e0

DP
type: SiteQuality
SIO_000300: 2.030997e6

MQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1500
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variant carriers: 0

GenotypeQuality
all individuals: 3858
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.666e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.14e-1

MQ
type: SiteQuality
SIO_000300: 5.904e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.839e0

FS
type: SiteQuality
SIO_000300: 3.313e0

VQSLOD
type: SiteQuality
SIO_000300: -6.854e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.34e-1

DP
type: SiteQuality
SIO_000300: 2.030833e6

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 69
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variant carriers: 0

GenotypeQuality
all individuals: 5812
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.026881e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.467e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e-1

FS
type: SiteQuality
SIO_000300: 1.038e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

MQRankSum
type: SiteQuality
SIO_000300: 8.45e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.501395432584101e-5
allele num: 66646
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
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MQ
type: SiteQuality
SIO_000300: 5.94e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.870000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.026999e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 3.209e0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.292e1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500420117632937e-5
allele num: 66648
num of homozygotes: 0

African
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South Asian
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allele num: 16508
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QD
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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East Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.189e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.269e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.38e-1

DP
type: SiteQuality
SIO_000300: 2.02688e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.5546e1

MQ
type: SiteQuality
SIO_000300: 5.897e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -4.169e0

VQSLOD
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SIO_000300: -2.286e0

QD
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DP
type: SiteQuality
SIO_000300: 2.026392e6

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.251e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.502070952638214e-5
allele num: 66636
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -1.336e0

QD
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SIO_000300: 1.325e1

InbreedingCoeff
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SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.08e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 17
allele frequency: 1.638712165027954e-3
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.798e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-2

FS
type: SiteQuality
SIO_000300: 5.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

MQRankSum
type: SiteQuality
SIO_000300: 7.13e-1

QD
type: SiteQuality
SIO_000300: 1.317e1

DP
type: SiteQuality
SIO_000300: 2.026122e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501140867058965e-5
allele num: 66616
num of homozygotes: 0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.145e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.154e0

FS
type: SiteQuality
SIO_000300: 3.657e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 2.023866e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.05e0

BaseQRankSum
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.657e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.165e1

DP
type: SiteQuality
SIO_000300: 2.023866e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501185936890143e-5
allele num: 66614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 1
allele frequency: 9.720062208398134e-5
allele num: 10288
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
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allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQ
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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FS
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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Other
type: Population
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Latino
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African
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.502358703163967e-5
allele num: 66562
num of homozygotes: 0

BaseQRankSum
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MQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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bin: 4.75e1
variant carriers: 6

GenotypeQuality
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bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 8646
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 839
bin: 9.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.06953642384106e-4
allele num: 14496
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 7.22543352601156e-4
allele num: 11072
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.526187576126675e-4
allele num: 8210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 80
allele frequency: 1.287249790821909e-3
allele num: 62148
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.106876553438277e-4
allele num: 9656
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5628
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.32e-2

DP
type: SiteQuality
SIO_000300: 2.199158e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 1.27453e2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.477e0

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.606e1

QD
type: SiteQuality
SIO_000300: 5.8e-1

GenotypeQuality
all individuals: 956
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 716
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 3

GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 696
bin: 8.75e1
variant carriers: 2

GenotypeQuality
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bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2950
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1458
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1055
bin: 4.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.612546125461254e-4
allele num: 10840
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.038205980066445e-4
allele num: 9632
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.299883010529053e-4
allele num: 15386
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.369196757553427e-4
allele num: 8142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.616579659098056e-4
allele num: 63596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.20427e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.787e1

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 2.160072e6

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.042e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.05e-2

QD
type: SiteQuality
SIO_000300: 4.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e0

GenotypeQuality
all individuals: 1609
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11032
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3013
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11244
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16206
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.014816318246397e-4
allele num: 9854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65448
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.906e0

VQSLOD
type: SiteQuality
SIO_000300: -4.809e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 8.843999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

QD
type: SiteQuality
SIO_000300: 1.594e1

DP
type: SiteQuality
SIO_000300: 2.047082e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.046e0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3097
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2916
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 736
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3410
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66490
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214919207872676e-4
allele num: 16462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.985719e6

MQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

QD
type: SiteQuality
SIO_000300: 1.328e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.315e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
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variant carriers: 0

GenotypeQuality
all individuals: 100
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variant carriers: 0

GenotypeQuality
all individuals: 2916
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34409
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3097
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3410
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.074596039363382e-5
allele num: 16462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.985719e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

FS
type: SiteQuality
SIO_000300: 1.315e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.328e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

GenotypeQuality
all individuals: 313
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 359
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2923
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4452
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GenotypeQuality
all individuals: 329
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 377
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10715
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33273
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 336
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2576
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 5.857087075361187e-4
allele num: 5122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.997660608241857e-5
allele num: 11114
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.360717658168083e-4
allele num: 8472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.480019733596448e-4
allele num: 60810
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.307e2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.758e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.41e-2

FS
type: SiteQuality
SIO_000300: 2.65165e2

MQRankSum
type: SiteQuality
SIO_000300: -6.16e-1

QD
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 5.863e1

DP
type: SiteQuality
SIO_000300: 2.137365e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e0